MD01G1215800.v1.1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0015712
Physical Location & Seq
Reverse (-)
30888631 .. 30890799
2169 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1215800.v1.1.491

Sequence Viewer

Length: 2169 bp
ATGACGACGTCGTCACCTGCATTCACCTCTTTGCTCTCTCTGAAAACGTTGATGGCGGGAACATGGAAGCACAACCGATGGAAGCCAAACCTTGAACAATTCTCAACCCTGAATTACAAAACTACGAAAACCCAAGACCCCAACATAGTTTCCACCAACATTTGCATAACTCGCCACTGCAAAAGCGGGCAGCTAGATGTTGCCCGGAAAATGTTCGACGAAATGCCAATGAGAACCCTCGTCTCATGGAACACCATGATTTCTGGATATTCAAAGTGGGGAAGATTCAGCGAGGCTTTATGGTTGGTCTCAGATATGCATCACGGCAATGTAAGGCTAAATGAGACGACTTTTATGACAACTCTCAGCGCGTGCGCGCGTTCGGGGTCTTTGAGTGAGGGAAAGGAGGTTCATTGCTTGGTTTTGAAATCTGGGTTAGAGTGCTTTGAGCTTTTGGGTAGTTCTCTGTTGTACTTTTACGCTAGTTGCCTTAAAATTGAGGATGCTAAGCAGGTTTTCAATGAGCTGCGCGGTGGAAATGATTTGTTGTGGAGCTTATTGCTTGTGGGCTATGTGCAGTGTAATTTGATGAGTGAAGCTACGGAGTTGTTTGTGAACATGCCGAAGCGGGATGTTTTGGCATGGACTACAATGATTTCGTGGTACGCTAAGAGCGAGGATGGGTGTAAGAGAGCCTTGGAGCTGTTTAAATGGATGATGAGTGATCGGGTGGCGCCTAACGAGTTTACTTTGGATTGTGTTATAAGGGCTTGTGGGAGATTAGGAGAGCTGTGTGTAGGGAAGGCTGTGCATGGAATTTTGATCAAACATGGTTTTGAGTCTGATGAATCGATTGGTGGTGCATTACTAGAATTTTATTGTGTTTGTGGAGCTGTTCATTGTGCCAGGAGAGTTTATGATAGAATAGAAAGCCCGAGTTTAAATGCTTCGAATTCGCTTATTGGAGGACTTGTGTTGATGGATAGGATTGAAGATGCAAAGCGAATTTTCGATATACTAAAAGAAAAGGATTCAGTTTCGTATAACTTGATGATTAAAGGTTATGCAACGAGTGGTCAAGTCGATGAATCAAAGAGATTATTTAAGAGTATGCCTCATAGAACTATAATTTCTTCAAATACTATGATTTCTGTGTATTCTAGGAATGGTGATATCGATAAGGCTTCAAAGATTTTTGAAGAAACAAAGGAGGAAAGAAACCCTGTGACATGGAACGCCATGATGTCGGGTTACATTCAAAATCACCAGCATGAGGAGGCTTTGGAGTTATACGCAACAATGCACAAATTGTCAATAGACCGTACAAGATCCACTTTCTCTGCTCTGTTTCATGCCTGTTCATGCCTTGGATCCCTTCAATCAGGACAAGTACTTCATGGTCATTTGATTAAAACACCATTTGAATCAGATGTGTATGTTGGGACATCCCTGATAGATATGTACTCCAAATGCGGAAGCATCACCGATGCCGAAGCATCATTCATCTGCATTGGTTCACCCAATGTGGCAGCTTGGACAGCTCTCATTAACGGGTATGCACAGTACGGGCTTGTCTCAAAGGCAATGTTGCTGTTTGAGAAAATGTTAAAGCAAGGAATCATTCCGAATGCTGCTACTTTTGTGGCAATTCTCTCTGCTTGCTGTCGTGCTGGTCTAGTCAACGAAGGGATGAGAATTTTCCACCTGATGGAAAAAAATTACGGAGTAAACCCTACACTTGAACACTATGCATGTGTAGTGGATCTTCTCGGTCGGTCTGGTTGTTTACAAGAAGCTATGGAGTTTATTCAAGAAATGCCAACTGAACCAGATGGGGTTATCTGGGGAGCTCTGCTAAATGCTTGTTGGTTCTGGATAGATATGGAACTGGGCGAGAGGGTGGCTGAGAAAATGTTATGTTTCGATCCAGAACCAGCCTCCGCATATATACTCTTATCGAACATATATGCAGTACTGGGAAAGTGGGGGGCGAAGATGAACGCGAGGAAGCGATTGAGAAACTTGGAGGTGAAAAAGGATCCTGGATGTAGTTGGATTGAGCTGAACAGGAAAGTTCATGTATTCTGTGTAGAAGATAAGTCCCATCTTCATTGTAATCTGATTTATGAAACATTGGAGTATCTGACAGCAAATATATATAAATTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cation_ATPase E1-E2_ATPase PPR PPR_2 PhoLip_ATPase_C

Protein Analysis

723

Amino Acids

81.24

Weight (kDa)

6.7

Isoelectric Point (pI)

47.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 80 - 127 6.2e-09 PPR repeat family
PPR PF01535 81 - 107 1.6e-07 PPR repeat
PPR_2 PF13041 211 - 259 5.5e-09 PPR repeat family
PPR PF01535 346 - 373 8.2e-06 PPR repeat
PPR_2 PF13041 407 - 454 1.4e-10 PPR repeat family
PPR PF01535 409 - 437 3.1e-06 PPR repeat
PPR_2 PF13041 507 - 556 2.2e-13 PPR repeat family
PPR_3 PF13812 507 - 554 2.2e-06 Pentatricopeptide repeat domain
PPR PF01535 511 - 540 4.5e-07 PPR repeat
E_motif PF20431 627 - 687 5.9e-14 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 764
AarI CACCTGC 1 cut(s) 25
AasI GACNNNNNNGTC 1 cut(s) 10
AatII GACGTC 1 cut(s) 11
Acc36I ACCTGC 2 cut(s) 25, 502
AccB1I GGYRCC 1 cut(s) 733
AccB7I CCANNNNNTGG 1 cut(s) 1708
AccII CGCG 5 cut(s) 371, 377, 379, 531, 2003
AciI CCGC 6 cut(s) 56, 186, 531, 628, 1473, 1941
AclI AACGTT 1 cut(s) 47
AclWI GGATC 7 cut(s) 1323, 1365, 1378, 1770, 1919, 2033, 2046
AcsI RAATTY 6 cut(s) 816, 872, 952, 1005, 1695, 2162
AcyI GRCGYC 2 cut(s) 8, 734
AfaI GTAC 7 cut(s) 473, 665, 1324, 1392, 1463, 1565, 1974
AfiI CCNNNNNNNGG 2 cut(s) 1273, 1708
AjnI CCWGG 2 cut(s) 905, 2041
AloI GAACNNNNNNTCC 2 cut(s) 393, 425
Alw21I GWGCWC 1 cut(s) 1852
Alw26I GTCTC 4 cut(s) 247, 313, 338, 1579
AlwI GGATC 7 cut(s) 1323, 1365, 1378, 1770, 1919, 2033, 2046
Ama87I CYCGRG 1 cut(s) 934
ApeKI GCWGC 4 cut(s) 190, 526, 1529, 1631
ApoI RAATTY 6 cut(s) 816, 872, 952, 1005, 1695, 2162
Asp700I GAANNNNTTC 1 cut(s) 212
AspLEI GCGC 5 cut(s) 371, 377, 379, 531, 736
AsuC2I CCSGG 1 cut(s) 205
AsuHPI GGTGA 7 cut(s) 6, 16, 1181, 1256, 1474, 1509, 2041
AsuII TTCGAA 1 cut(s) 950
AvaI CYCGRG 1 cut(s) 934
BamHI GGATCC 2 cut(s) 1370, 2038
BanI GGYRCC 1 cut(s) 733
BanII GRGCYC 1 cut(s) 1852
BarI GAAGNNNNNNTAC 2 cut(s) 1749, 1781
Bbv12I GWGCWC 1 cut(s) 1852
BbvI GCAGC 4 cut(s) 202, 513, 1541, 1618
BccI CCATC 7 cut(s) 46, 72, 674, 973, 1702, 1826, 2112
BceAI ACGGC 1 cut(s) 340
BciT130I CCWGG 2 cut(s) 907, 2043
BclI TGATCA 1 cut(s) 822
BcnI CCSGG 1 cut(s) 205
BcoDI GTCTC 4 cut(s) 247, 313, 338, 1579
BfaI CTAG 5 cut(s) 194, 483, 869, 1161, 1676
BfoI RGCGCY 1 cut(s) 737
BfuAI ACCTGC 2 cut(s) 25, 502
BisI GCNGC 4 cut(s) 191, 527, 1530, 1632
BlpI GCTNAGC 1 cut(s) 507
BlsI GCNGC 4 cut(s) 192, 528, 1531, 1633
BmcAI AGTACT 2 cut(s) 1392, 1974
Bme1390I CCNGG 3 cut(s) 205, 907, 2043
BmeT110I CYCGRG 1 cut(s) 934
BmiI GGNNCC 3 cut(s) 735, 1372, 2040
BmrFI CCNGG 3 cut(s) 205, 907, 2043
BmrI ACTGGG 2 cut(s) 1898, 1985
BmsI GCATC 6 cut(s) 328, 493, 985, 1477, 1488, 1505
BmuI ACTGGG 2 cut(s) 1898, 1985
BplI GAGNNNNNCTC 2 cut(s) 1099, 1131
Bpu1102I GCTNAGC 1 cut(s) 507
Bpu14I TTCGAA 1 cut(s) 950
BpuMI CCSGG 1 cut(s) 205
Bsa29I ATCGAT 2 cut(s) 851, 1176
BsaBI GATNNNNATC 1 cut(s) 318
BsaHI GRCGYC 2 cut(s) 8, 734
BsaI GGTCTC 1 cut(s) 313
BsaJI CCNNGG 2 cut(s) 696, 1366
BsaXI ACNNNNNCTCC 2 cut(s) 957, 987
Bsc4I CCNNNNNNNGG 2 cut(s) 1273, 1708
Bse1I ACTGG 2 cut(s) 1893, 1980
Bse3DI GCAATG 3 cut(s) 334, 412, 1590
Bse8I GATNNNNATC 1 cut(s) 318
BseBI CCWGG 2 cut(s) 907, 2043
BseCI ATCGAT 2 cut(s) 851, 1176
BseDI CCNNGG 2 cut(s) 696, 1366
BseGI GGATG 7 cut(s) 508, 637, 685, 720, 1445, 1695, 2051
BseJI GATNNNNATC 1 cut(s) 318
BseLI CCNNNNNNNGG 2 cut(s) 1273, 1708
BseMI GCAATG 3 cut(s) 334, 412, 1590
BseMII CTCAG 3 cut(s) 324, 379, 1896
BseNI ACTGG 2 cut(s) 1893, 1980
BsePI GCGCGC 1 cut(s) 375
BseRI GAGGAG 1 cut(s) 1289
BseXI GCAGC 4 cut(s) 202, 513, 1541, 1618
BsgI GTGCAG 1 cut(s) 596
Bsh1236I CGCG 5 cut(s) 371, 377, 379, 531, 2003
Bsh1285I CGRYCG 1 cut(s) 1774
BshNI GGYRCC 1 cut(s) 733
BshVI ATCGAT 2 cut(s) 851, 1176
BsiEI CGRYCG 1 cut(s) 1774
BsiHKAI GWGCWC 1 cut(s) 1852
BsiHKCI CYCGRG 1 cut(s) 934
BsiSI CCGG 1 cut(s) 205
BslFI GGGAC 2 cut(s) 1456, 2086
BslI CCNNNNNNNGG 2 cut(s) 1273, 1708
BsmAI GTCTC 4 cut(s) 247, 313, 338, 1579
BsmBI CGTCTC 2 cut(s) 247, 338
BsmFI GGGAC 2 cut(s) 1456, 2086
BsmI GAATGC 2 cut(s) 20, 1633
Bso31I GGTCTC 1 cut(s) 313
BsoBI CYCGRG 1 cut(s) 934
Bsp119I TTCGAA 1 cut(s) 950
Bsp1286I GDGCHC 1 cut(s) 1852
Bsp143I GATC 7 cut(s) 724, 822, 1328, 1370, 1762, 1924, 2038
Bsp1720I GCTNAGC 1 cut(s) 507
BspACI CCGC 6 cut(s) 56, 186, 531, 628, 1473, 1941
BspCNI CTCAG 3 cut(s) 323, 378, 1897
BspDI ATCGAT 2 cut(s) 851, 1176
BspFNI CGCG 5 cut(s) 371, 377, 379, 531, 2003
BspLI GGNNCC 3 cut(s) 735, 1372, 2040
BspMI ACCTGC 2 cut(s) 25, 502
BspPI GGATC 7 cut(s) 1323, 1365, 1378, 1770, 1919, 2033, 2046
BspT104I TTCGAA 1 cut(s) 950
BspT107I GGYRCC 1 cut(s) 733
BspTNI GGTCTC 1 cut(s) 313
BsrDI GCAATG 3 cut(s) 334, 412, 1590
BsrI ACTGG 2 cut(s) 1893, 1980
BssECI CCNNGG 2 cut(s) 696, 1366
BssHII GCGCGC 1 cut(s) 375
BssMI GATC 7 cut(s) 724, 822, 1328, 1370, 1762, 1924, 2038
BssNI GRCGYC 2 cut(s) 8, 734
BssT1I CCWWGG 2 cut(s) 696, 1366
Bst2UI CCWGG 2 cut(s) 907, 2043
Bst4CI ACNGT 2 cut(s) 1322, 1563
BstACI GRCGYC 2 cut(s) 8, 734
BstBI TTCGAA 1 cut(s) 950
BstC8I GCNNGC 4 cut(s) 188, 373, 377, 1660
BstDEI CTNAG 5 cut(s) 310, 365, 507, 669, 1905
BstF5I GGATG 7 cut(s) 508, 637, 685, 720, 1445, 1695, 2051
BstFNI CGCG 5 cut(s) 371, 377, 379, 531, 2003
BstH2I RGCGCY 1 cut(s) 737
BstHHI GCGC 5 cut(s) 371, 377, 379, 531, 736
BstKTI GATC 7 cut(s) 727, 825, 1331, 1373, 1765, 1927, 2041
BstMAI GTCTC 4 cut(s) 247, 313, 338, 1579
BstMBI GATC 7 cut(s) 724, 822, 1328, 1370, 1762, 1924, 2038
BstMCI CGRYCG 1 cut(s) 1774
BstMWI GCNNNNNNNGC 2 cut(s) 171, 1538
BstNI CCWGG 2 cut(s) 907, 2043
BstNSI RCATGY 2 cut(s) 622, 1755
BstSCI CCNGG 3 cut(s) 203, 905, 2041
BstUI CGCG 5 cut(s) 371, 377, 379, 531, 2003
BstV1I GCAGC 4 cut(s) 202, 513, 1541, 1618
BstX2I RGATCY 4 cut(s) 1328, 1370, 1762, 2038
BstYI RGATCY 4 cut(s) 1328, 1370, 1762, 2038
Bsu15I ATCGAT 2 cut(s) 851, 1176
BsuTUI ATCGAT 2 cut(s) 851, 1176
BtsCI GGATG 7 cut(s) 508, 637, 685, 720, 1445, 1695, 2051
BtsI GCAGTG 2 cut(s) 175, 584
BtsIMutI CAGTG 2 cut(s) 175, 584
BveI ACCTGC 2 cut(s) 25, 502
Cac8I GCNNGC 4 cut(s) 188, 373, 377, 1660
CfoI GCGC 5 cut(s) 371, 377, 379, 531, 736
ClaI ATCGAT 2 cut(s) 851, 1176
Csp6I GTAC 7 cut(s) 472, 664, 1323, 1391, 1462, 1564, 1973
CviQI GTAC 7 cut(s) 472, 664, 1323, 1391, 1462, 1564, 1973
DdeI CTNAG 5 cut(s) 310, 365, 507, 669, 1905
DinI GGCGCC 1 cut(s) 735
DpnI GATC 7 cut(s) 726, 824, 1330, 1372, 1764, 1926, 2040
DpnII GATC 7 cut(s) 724, 822, 1328, 1370, 1762, 1924, 2038
DraI TTTAAA 2 cut(s) 709, 942
DrdI GACNNNNNNGTC 1 cut(s) 10
DseDI GACNNNNNNGTC 1 cut(s) 10
Ecl136II GAGCTC 1 cut(s) 1850
Eco130I CCWWGG 2 cut(s) 696, 1366
Eco24I GRGCYC 1 cut(s) 1852
Eco31I GGTCTC 1 cut(s) 313
Eco32I GATATC 1 cut(s) 1174
Eco53kI GAGCTC 1 cut(s) 1850
Eco88I CYCGRG 1 cut(s) 934
EcoICRI GAGCTC 1 cut(s) 1850
EcoRI GAATTC 1 cut(s) 952
EcoRII CCWGG 2 cut(s) 905, 2041
EcoRV GATATC 1 cut(s) 1174
EcoT14I CCWWGG 2 cut(s) 696, 1366
EcoT22I ATGCAT 2 cut(s) 321, 1753
EcoT38I GRGCYC 1 cut(s) 1852
EgeI GGCGCC 1 cut(s) 735
EheI GGCGCC 1 cut(s) 735
ErhI CCWWGG 2 cut(s) 696, 1366
Esp3I CGTCTC 2 cut(s) 247, 338
FalI AAGNNNNNCTT 4 cut(s) 680, 712, 1318, 1350
FaqI GGGAC 2 cut(s) 1456, 2086
FauI CCCGC 3 cut(s) 49, 179, 621
FbaI TGATCA 1 cut(s) 822
Fnu4HI GCNGC 4 cut(s) 191, 527, 1530, 1632
FokI GGATG 7 cut(s) 515, 644, 692, 727, 1432, 1702, 2058
FriOI GRGCYC 1 cut(s) 1852
Fsp4HI GCNGC 4 cut(s) 191, 527, 1530, 1632
FspBI CTAG 5 cut(s) 194, 483, 869, 1161, 1676
GlaI GCGC 5 cut(s) 370, 376, 378, 530, 735
GluI GCNGC 4 cut(s) 191, 527, 1530, 1632
HaeII RGCGCY 1 cut(s) 737
HapII CCGG 1 cut(s) 205
HhaI GCGC 5 cut(s) 371, 377, 379, 531, 736
Hin1I GRCGYC 2 cut(s) 8, 734
Hin6I GCGC 5 cut(s) 369, 375, 377, 529, 734
HinP1I GCGC 5 cut(s) 369, 375, 377, 529, 734
HincII GTYRAC 1 cut(s) 1681
HindII GTYRAC 1 cut(s) 1681
HinfI GANTC 7 cut(s) 285, 839, 848, 1031, 1088, 1424, 1617
HpaII CCGG 1 cut(s) 205
HphI GGTGA 7 cut(s) 6, 16, 1181, 1256, 1474, 1509, 2041
Hpy166II GTNNAC 6 cut(s) 616, 747, 1517, 1681, 1729, 1787
Hpy188I TCNGA 7 cut(s) 42, 313, 844, 1429, 1626, 2121, 2145
Hpy188III TCNNGA 5 cut(s) 264, 1383, 1811, 1873, 1928
Hpy8I GTNNAC 6 cut(s) 616, 747, 1517, 1681, 1729, 1787
Hpy99I CGWCG 3 cut(s) 10, 13, 221
HpyAV CCTTC 3 cut(s) 796, 1385, 1679
HpyCH4III ACNGT 2 cut(s) 1322, 1563
HpyCH4IV ACGT 2 cut(s) 8, 47
HpyF10VI GCNNNNNNNGC 2 cut(s) 171, 1538
HpyF3I CTNAG 5 cut(s) 310, 365, 507, 669, 1905
HpySE526I ACGT 2 cut(s) 8, 47
Hsp92I GRCGYC 2 cut(s) 8, 734
HspAI GCGC 5 cut(s) 369, 375, 377, 529, 734
KasI GGCGCC 1 cut(s) 733
Ksp22I TGATCA 1 cut(s) 822
Kzo9I GATC 7 cut(s) 724, 822, 1328, 1370, 1762, 1924, 2038
LmnI GCTCC 4 cut(s) 552, 700, 890, 1847
Lsp1109I GCAGC 4 cut(s) 202, 513, 1541, 1618
LweI GCATC 6 cut(s) 328, 493, 985, 1477, 1488, 1505
MaeI CTAG 5 cut(s) 194, 483, 869, 1161, 1676
MaeII ACGT 2 cut(s) 8, 47
MaeIII GTNAC 3 cut(s) 12, 1225, 1250
MalI GATC 7 cut(s) 726, 824, 1330, 1372, 1764, 1926, 2040
MboI GATC 7 cut(s) 724, 822, 1328, 1370, 1762, 1924, 2038
MboII GAAGA 8 cut(s) 294, 1004, 1125, 1211, 1757, 2005, 2099, 2105
MflI RGATCY 4 cut(s) 1328, 1370, 1762, 2038
MhlI GDGCHC 1 cut(s) 1852
Mly113I GGCGCC 1 cut(s) 734
MlyI GAGTC 1 cut(s) 848
MmeI TCCRAC 1 cut(s) 2033
Mph1103I ATGCAT 2 cut(s) 321, 1753
MroXI GAANNNNTTC 1 cut(s) 212
MseI TTAA 8 cut(s) 492, 708, 941, 1056, 1104, 1410, 1548, 1607
MslI CAYNNNNRTG 2 cut(s) 327, 1269
MspI CCGG 1 cut(s) 205
MspR9I CCNGG 3 cut(s) 205, 907, 2043
Mva1269I GAATGC 2 cut(s) 20, 1633
MvaI CCWGG 2 cut(s) 907, 2043
MvnI CGCG 5 cut(s) 371, 377, 379, 531, 2003
MwoI GCNNNNNNNGC 2 cut(s) 171, 1538
NarI GGCGCC 1 cut(s) 734
NciI CCSGG 1 cut(s) 205
NdeII GATC 7 cut(s) 724, 822, 1328, 1370, 1762, 1924, 2038
NlaIV GGNNCC 3 cut(s) 735, 1372, 2040
NmuCI GTSAC 2 cut(s) 12, 1225
NsiI ATGCAT 2 cut(s) 321, 1753
NspI RCATGY 2 cut(s) 622, 1755
NspV TTCGAA 1 cut(s) 950
PaqCI CACCTGC 1 cut(s) 25
PauI GCGCGC 1 cut(s) 375
PcsI WCGNNNNNNNCGW 1 cut(s) 672
PctI GAATGC 2 cut(s) 20, 1633
PdmI GAANNNNTTC 1 cut(s) 212
PfeI GAWTC 6 cut(s) 285, 848, 1031, 1088, 1424, 1617
PflFI GACNNNGTC 2 cut(s) 7, 10
PflMI CCANNNNNTGG 1 cut(s) 1708
PfoI TCCNGGA 1 cut(s) 2041
PkrI GCNGC 4 cut(s) 192, 528, 1531, 1633
PleI GAGTC 1 cut(s) 847
PluTI GGCGCC 1 cut(s) 737
PpsI GAGTC 1 cut(s) 847
PsiI TTATAA 1 cut(s) 764
Psp124BI GAGCTC 1 cut(s) 1852
Psp1406I AACGTT 1 cut(s) 47
Psp6I CCWGG 2 cut(s) 905, 2041
PspGI CCWGG 2 cut(s) 905, 2041
PspN4I GGNNCC 3 cut(s) 735, 1372, 2040
PsuI RGATCY 4 cut(s) 1328, 1370, 1762, 2038
PsyI GACNNNGTC 2 cut(s) 7, 10
PteI GCGCGC 1 cut(s) 375
RsaI GTAC 7 cut(s) 473, 665, 1324, 1392, 1463, 1565, 1974
RsaNI GTAC 7 cut(s) 472, 664, 1323, 1391, 1462, 1564, 1973
RseI CAYNNNNRTG 2 cut(s) 327, 1269
SacI GAGCTC 1 cut(s) 1852
SaqAI TTAA 8 cut(s) 492, 708, 941, 1056, 1104, 1410, 1548, 1607
SatI GCNGC 4 cut(s) 191, 527, 1530, 1632
Sau3AI GATC 7 cut(s) 724, 822, 1328, 1370, 1762, 1924, 2038
ScaI AGTACT 2 cut(s) 1392, 1974
SchI GAGTC 1 cut(s) 848
ScrFI CCNGG 3 cut(s) 205, 907, 2043
SduI GDGCHC 1 cut(s) 1852
SfaNI GCATC 6 cut(s) 328, 493, 985, 1477, 1488, 1505
SfoI GGCGCC 1 cut(s) 735
SfuI TTCGAA 1 cut(s) 950
SmiMI CAYNNNNRTG 2 cut(s) 327, 1269
SsiI CCGC 6 cut(s) 56, 186, 531, 628, 1473, 1941
SspDI GGCGCC 1 cut(s) 733
SspMI CTAG 5 cut(s) 194, 483, 869, 1161, 1676
SstI GAGCTC 1 cut(s) 1852
StyD4I CCNGG 3 cut(s) 203, 905, 2041
StyI CCWWGG 2 cut(s) 696, 1366
TaaI ACNGT 2 cut(s) 1322, 1563
TaiI ACGT 2 cut(s) 11, 50
TaqI TCGA 8 cut(s) 216, 851, 950, 1011, 1083, 1176, 1923, 1958
TaqII GACCGA 2 cut(s) 1760, 1764
TatI WGTACW 4 cut(s) 471, 1390, 1461, 1972
TfiI GAWTC 6 cut(s) 285, 848, 1031, 1088, 1424, 1617
Tru1I TTAA 8 cut(s) 492, 708, 941, 1056, 1104, 1410, 1548, 1607
Tru9I TTAA 8 cut(s) 492, 708, 941, 1056, 1104, 1410, 1548, 1607
TscAI CASTG 2 cut(s) 182, 584
TseFI GTSAC 2 cut(s) 12, 1225
TseI GCWGC 4 cut(s) 190, 526, 1529, 1631
Tsp45I GTSAC 2 cut(s) 12, 1225
TspGWI ACGGA 2 cut(s) 617, 1737
TspRI CASTG 2 cut(s) 182, 584
Tth111I GACNNNGTC 2 cut(s) 7, 10
Van91I CCANNNNNTGG 1 cut(s) 1708
XapI RAATTY 6 cut(s) 816, 872, 952, 1005, 1695, 2162
XceI RCATGY 2 cut(s) 622, 1755
XmnI GAANNNNTTC 1 cut(s) 212
XspI CTAG 5 cut(s) 194, 483, 869, 1161, 1676
ZraI GACGTC 1 cut(s) 9
ZrmI AGTACT 2 cut(s) 1392, 1974
Zsp2I ATGCAT 2 cut(s) 321, 1753
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.