zinc finger CCCH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G18090 AT2G18090 AT3G51120 |
| fragaria_vesca | FvH4_1g12170 FvH4_1g12170 |
| malus_domestica | MD02G1135700.v1.1 MD15G1249200.v1.1 |
| prunus_persica | Prupe.7G165000_v2.0.a1 Prupe.7G165000_v2.0.a1 Prupe.7G165000_v2.0.a1 |
| pyrus_communis | pycom02g10700 pycom15g21940 |
| rosa_chinensis | RchiOBHm_Chr2g0099921 RchiOBHm_Chr2g0099931 |
| rosa_laevigata | RLG00000016923 |
| rosa_multiflora | Rmu_sc0008864.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00142730 |
| rosa_rugosa | Rorug02G0084000 Rorug02G0084100 |
| rosa_samantha | Rh2AG133000 Rh2BG136500 Rh2CG138100 Rh2DG138500 |
| rosa_wichuraiana | Rw2G010350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1524 |
| AarI | CACCTGC | 1 cut(s) | 2704 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 4113 |
| Acc36I | ACCTGC | 2 cut(s) | 2704, 3827 |
| Acc65I | GGTACC | 2 cut(s) | 1499, 1838 |
| AccB1I | GGYRCC | 6 cut(s) | 363, 1499, 1838, 2044, 2098, 3271 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2603, 3158 |
| AccII | CGCG | 1 cut(s) | 530 |
| AccIII | TCCGGA | 1 cut(s) | 3280 |
| AclWI | GGATC | 8 cut(s) | 1034, 1934, 1946, 1959, 2760, 2906, 2919, 3069 |
| AcoI | YGGCCR | 5 cut(s) | 138, 248, 2644, 3043, 3229 |
| AcsI | RAATTY | 8 cut(s) | 811, 1136, 1446, 1920, 2245, 2525, 2905, 3395 |
| AcuI | CTGAAG | 2 cut(s) | 1947, 3459 |
| AcyI | GRCGYC | 1 cut(s) | 923 |
| AflIII | ACRYGT | 1 cut(s) | 572 |
| AgeI | ACCGGT | 1 cut(s) | 105 |
| AjnI | CCWGG | 9 cut(s) | 996, 1186, 1623, 2157, 2325, 2748, 3571, 3987, 4039 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1407, 1439, 2891, 2923 |
| Alw21I | GWGCWC | 5 cut(s) | 936, 2690, 3245, 3596, 3674 |
| Alw26I | GTCTC | 5 cut(s) | 2297, 3156, 3346, 3449, 3789 |
| AlwI | GGATC | 8 cut(s) | 1034, 1934, 1946, 1959, 2760, 2906, 2919, 3069 |
| Aor13HI | TCCGGA | 1 cut(s) | 3280 |
| ApeKI | GCWGC | 9 cut(s) | 470, 651, 752, 1209, 2534, 2924, 3179, 3465, 4243 |
| ApoI | RAATTY | 8 cut(s) | 811, 1136, 1446, 1920, 2245, 2525, 2905, 3395 |
| AseI | ATTAAT | 1 cut(s) | 1350 |
| AsiGI | ACCGGT | 1 cut(s) | 105 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3924 |
| Asp718I | GGTACC | 2 cut(s) | 1499, 1838 |
| AspLEI | GCGC | 2 cut(s) | 530, 1908 |
| AsuC2I | CCSGG | 4 cut(s) | 2112, 3001, 3135, 4060 |
| AsuHPI | GGTGA | 8 cut(s) | 133, 292, 977, 1469, 1700, 3593, 3614, 3712 |
| AvaII | GGWCC | 7 cut(s) | 41, 1301, 2329, 2351, 3137, 3965, 4115 |
| AxyI | CCTNAGG | 1 cut(s) | 369 |
| BaeGI | GKGCMC | 5 cut(s) | 368, 2047, 2397, 3274, 4275 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 960, 993, 1830, 1863 |
| BalI | TGGCCA | 3 cut(s) | 2646, 3045, 3231 |
| BamHI | GGATCC | 2 cut(s) | 1951, 2911 |
| BanI | GGYRCC | 6 cut(s) | 363, 1499, 1838, 2044, 2098, 3271 |
| BanII | GRGCYC | 5 cut(s) | 628, 936, 1668, 3596, 3674 |
| BauI | CACGAG | 2 cut(s) | 341, 4027 |
| BbsI | GAAGAC | 3 cut(s) | 63, 312, 915 |
| Bbv12I | GWGCWC | 5 cut(s) | 936, 2690, 3245, 3596, 3674 |
| BbvI | GCAGC | 9 cut(s) | 457, 663, 739, 1221, 2521, 2911, 3191, 3477, 4255 |
| BceAI | ACGGC | 3 cut(s) | 291, 740, 4105 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1958, 1992 |
| BciT130I | CCWGG | 9 cut(s) | 998, 1188, 1625, 2159, 2327, 2750, 3573, 3989, 4041 |
| BciVI | GTATCC | 1 cut(s) | 4005 |
| BclI | TGATCA | 2 cut(s) | 2407, 2890 |
| BcnI | CCSGG | 4 cut(s) | 2112, 3001, 3135, 4060 |
| BcoDI | GTCTC | 5 cut(s) | 2297, 3156, 3346, 3449, 3789 |
| BfaI | CTAG | 5 cut(s) | 1892, 1944, 2088, 2715, 3252 |
| BfmI | CTRYAG | 3 cut(s) | 2265, 3315, 3543 |
| BfuAI | ACCTGC | 2 cut(s) | 2704, 3827 |
| BfuI | GTATCC | 1 cut(s) | 4005 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 259 |
| BglII | AGATCT | 6 cut(s) | 838, 1560, 1602, 2024, 3427, 3755 |
| BlpI | GCTNAGC | 2 cut(s) | 18, 1667 |
| Bme18I | GGWCC | 7 cut(s) | 41, 1301, 2329, 2351, 3137, 3965, 4115 |
| BmrI | ACTGGG | 3 cut(s) | 39, 1384, 3307 |
| BmuI | ACTGGG | 3 cut(s) | 39, 1384, 3307 |
| BpiI | GAAGAC | 3 cut(s) | 63, 312, 915 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 4092, 4124, 4216, 4248 |
| BpmI | CTGGAG | 5 cut(s) | 1209, 2001, 3031, 3107, 3259 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2928 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 18, 1667 |
| BpuEI | CTTGAG | 3 cut(s) | 29, 612, 1577 |
| BpuMI | CCSGG | 4 cut(s) | 2112, 3001, 3135, 4060 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2433 |
| BsaHI | GRCGYC | 1 cut(s) | 923 |
| BsaWI | WCCGGW | 2 cut(s) | 105, 3280 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2014, 2044 |
| Bse118I | RCCGGY | 3 cut(s) | 105, 115, 246 |
| Bse21I | CCTNAGG | 1 cut(s) | 369 |
| Bse3DI | GCAATG | 4 cut(s) | 1713, 3163, 3456, 4210 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2433 |
| BseAI | TCCGGA | 1 cut(s) | 3280 |
| BseBI | CCWGG | 9 cut(s) | 998, 1188, 1625, 2159, 2327, 2750, 3573, 3989, 4041 |
| BseJI | GATNNNNATC | 1 cut(s) | 2433 |
| BseMI | GCAATG | 4 cut(s) | 1713, 3163, 3456, 4210 |
| BseMII | CTCAG | 6 cut(s) | 32, 1681, 2220, 2534, 2942, 3475 |
| BseRI | GAGGAG | 5 cut(s) | 84, 87, 224, 2886, 4221 |
| BseSI | GKGCMC | 5 cut(s) | 368, 2047, 2397, 3274, 4275 |
| BseX3I | CGGCCG | 2 cut(s) | 138, 248 |
| BseXI | GCAGC | 9 cut(s) | 457, 663, 739, 1221, 2521, 2911, 3191, 3477, 4255 |
| BseYI | CCCAGC | 4 cut(s) | 254, 654, 2390, 3559 |
| BsgI | GTGCAG | 5 cut(s) | 840, 855, 2676, 3843, 4289 |
| Bsh1236I | CGCG | 1 cut(s) | 530 |
| Bsh1285I | CGRYCG | 4 cut(s) | 110, 141, 159, 251 |
| BshNI | GGYRCC | 6 cut(s) | 363, 1499, 1838, 2044, 2098, 3271 |
| BshTI | ACCGGT | 1 cut(s) | 105 |
| BsiEI | CGRYCG | 4 cut(s) | 110, 141, 159, 251 |
| BsiHKAI | GWGCWC | 5 cut(s) | 936, 2690, 3245, 3596, 3674 |
| BsiSI | CCGG | 8 cut(s) | 106, 116, 247, 2111, 3000, 3135, 3281, 4059 |
| BslFI | GGGAC | 4 cut(s) | 413, 3123, 3518, 3969 |
| BsmAI | GTCTC | 5 cut(s) | 2297, 3156, 3346, 3449, 3789 |
| BsmFI | GGGAC | 4 cut(s) | 413, 3123, 3518, 3969 |
| BsmI | GAATGC | 2 cut(s) | 1637, 1985 |
| Bsp13I | TCCGGA | 1 cut(s) | 3280 |
| Bsp1407I | TGTACA | 2 cut(s) | 494, 3763 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 18, 1667 |
| Bsp19I | CCATGG | 2 cut(s) | 740, 3696 |
| BspCNI | CTCAG | 6 cut(s) | 31, 1680, 2221, 2533, 2941, 3474 |
| BspEI | TCCGGA | 1 cut(s) | 3280 |
| BspFNI | CGCG | 1 cut(s) | 530 |
| BspHI | TCATGA | 1 cut(s) | 3489 |
| BspMI | ACCTGC | 2 cut(s) | 2704, 3827 |
| BspPI | GGATC | 8 cut(s) | 1034, 1934, 1946, 1959, 2760, 2906, 2919, 3069 |
| BspT107I | GGYRCC | 6 cut(s) | 363, 1499, 1838, 2044, 2098, 3271 |
| BsrDI | GCAATG | 4 cut(s) | 1713, 3163, 3456, 4210 |
| BsrFI | RCCGGY | 3 cut(s) | 105, 115, 246 |
| BsrGI | TGTACA | 2 cut(s) | 494, 3763 |
| BssAI | RCCGGY | 3 cut(s) | 105, 115, 246 |
| BssNI | GRCGYC | 1 cut(s) | 923 |
| BssSI | CACGAG | 2 cut(s) | 341, 4027 |
| BssT1I | CCWWGG | 9 cut(s) | 267, 740, 1164, 2007, 2018, 2060, 3618, 3696, 4082 |
| Bst2BI | CACGAG | 2 cut(s) | 341, 4027 |
| Bst2UI | CCWGG | 9 cut(s) | 998, 1188, 1625, 2159, 2327, 2750, 3573, 3989, 4041 |
| Bst6I | CTCTTC | 4 cut(s) | 671, 2266, 2613, 3253 |
| BstACI | GRCGYC | 1 cut(s) | 923 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 363, 516, 4189 |
| BstAUI | TGTACA | 2 cut(s) | 494, 3763 |
| BstC8I | GCNNGC | 9 cut(s) | 15, 24, 117, 248, 260, 264, 3229, 4056, 4271 |
| BstDEI | CTNAG | 8 cut(s) | 18, 369, 1667, 1814, 2229, 2520, 2928, 3461 |
| BstDSI | CCRYGG | 2 cut(s) | 740, 3696 |
| BstEII | GGTNACC | 1 cut(s) | 1457 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 1151, 3576, 4236 |
| BstFNI | CGCG | 1 cut(s) | 530 |
| BstHHI | GCGC | 2 cut(s) | 530, 1908 |
| BstMAI | GTCTC | 5 cut(s) | 2297, 3156, 3346, 3449, 3789 |
| BstMCI | CGRYCG | 4 cut(s) | 110, 141, 159, 251 |
| BstNI | CCWGG | 9 cut(s) | 998, 1188, 1625, 2159, 2327, 2750, 3573, 3989, 4041 |
| BstNSI | RCATGY | 3 cut(s) | 266, 576, 3726 |
| BstPI | GGTNACC | 1 cut(s) | 1457 |
| BstSFI | CTRYAG | 3 cut(s) | 2265, 3315, 3543 |
| BstSLI | GKGCMC | 5 cut(s) | 368, 2047, 2397, 3274, 4275 |
| BstUI | CGCG | 1 cut(s) | 530 |
| BstV1I | GCAGC | 9 cut(s) | 457, 663, 739, 1221, 2521, 2911, 3191, 3477, 4255 |
| BstV2I | GAAGAC | 3 cut(s) | 63, 312, 915 |
| BstX2I | RGATCY | 9 cut(s) | 838, 1560, 1602, 1951, 2024, 2911, 3061, 3427, 3755 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 886, 2455, 3625 |
| BstYI | RGATCY | 9 cut(s) | 838, 1560, 1602, 1951, 2024, 2911, 3061, 3427, 3755 |
| BstZI | CGGCCG | 2 cut(s) | 138, 248 |
| Bsu36I | CCTNAGG | 1 cut(s) | 369 |
| BsuI | GTATCC | 1 cut(s) | 4005 |
| BtgI | CCRYGG | 2 cut(s) | 740, 3696 |
| BtgZI | GCGATG | 1 cut(s) | 3638 |
| BtsI | GCAGTG | 5 cut(s) | 1981, 2688, 3675, 3855, 4273 |
| BveI | ACCTGC | 2 cut(s) | 2704, 3827 |
| Cac8I | GCNNGC | 9 cut(s) | 15, 24, 117, 248, 260, 264, 3229, 4056, 4271 |
| CciI | TCATGA | 1 cut(s) | 3489 |
| CfoI | GCGC | 2 cut(s) | 530, 1908 |
| Cfr10I | RCCGGY | 3 cut(s) | 105, 115, 246 |
| CseI | GACGC | 1 cut(s) | 912 |
| CspAI | ACCGGT | 1 cut(s) | 105 |
| DdeI | CTNAG | 8 cut(s) | 18, 369, 1667, 1814, 2229, 2520, 2928, 3461 |
| DraI | TTTAAA | 3 cut(s) | 415, 727, 3358 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 4113 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 4113 |
| EaeI | YGGCCR | 5 cut(s) | 138, 248, 2644, 3043, 3229 |
| EagI | CGGCCG | 2 cut(s) | 138, 248 |
| Eam1104I | CTCTTC | 4 cut(s) | 671, 2266, 2613, 3253 |
| EarI | CTCTTC | 4 cut(s) | 671, 2266, 2613, 3253 |
| EciI | GGCGGA | 2 cut(s) | 81, 4113 |
| Ecl136II | GAGCTC | 3 cut(s) | 934, 3594, 3672 |
| EclXI | CGGCCG | 2 cut(s) | 138, 248 |
| Eco130I | CCWWGG | 9 cut(s) | 267, 740, 1164, 2007, 2018, 2060, 3618, 3696, 4082 |
| Eco147I | AGGCCT | 4 cut(s) | 407, 2748, 3016, 4228 |
| Eco24I | GRGCYC | 5 cut(s) | 628, 936, 1668, 3596, 3674 |
| Eco47I | GGWCC | 7 cut(s) | 41, 1301, 2329, 2351, 3137, 3965, 4115 |
| Eco52I | CGGCCG | 2 cut(s) | 138, 248 |
| Eco53kI | GAGCTC | 3 cut(s) | 934, 3594, 3672 |
| Eco57I | CTGAAG | 2 cut(s) | 1947, 3459 |
| Eco81I | CCTNAGG | 1 cut(s) | 369 |
| Eco91I | GGTNACC | 1 cut(s) | 1457 |
| EcoICRI | GAGCTC | 3 cut(s) | 934, 3594, 3672 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 1151, 3576, 4236 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2329 |
| EcoO65I | GGTNACC | 1 cut(s) | 1457 |
| EcoRI | GAATTC | 1 cut(s) | 1446 |
| EcoRII | CCWGG | 9 cut(s) | 996, 1186, 1623, 2157, 2325, 2748, 3571, 3987, 4039 |
| EcoT14I | CCWWGG | 9 cut(s) | 267, 740, 1164, 2007, 2018, 2060, 3618, 3696, 4082 |
| EcoT22I | ATGCAT | 3 cut(s) | 392, 2467, 4194 |
| EcoT38I | GRGCYC | 5 cut(s) | 628, 936, 1668, 3596, 3674 |
| ErhI | CCWWGG | 9 cut(s) | 267, 740, 1164, 2007, 2018, 2060, 3618, 3696, 4082 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 920, 952, 2032, 2064, 3019, 3051 |
| FaqI | GGGAC | 4 cut(s) | 413, 3123, 3518, 3969 |
| FauI | CCCGC | 9 cut(s) | 155, 178, 208, 234, 251, 390, 4063, 4239, 4262 |
| FbaI | TGATCA | 2 cut(s) | 2407, 2890 |
| FriOI | GRGCYC | 5 cut(s) | 628, 936, 1668, 3596, 3674 |
| FseI | GGCCGGCC | 1 cut(s) | 250 |
| FspBI | CTAG | 5 cut(s) | 1892, 1944, 2088, 2715, 3252 |
| GlaI | GCGC | 2 cut(s) | 529, 1907 |
| GsaI | CCCAGC | 4 cut(s) | 258, 658, 2394, 3563 |
| GsuI | CTGGAG | 5 cut(s) | 1209, 2001, 3031, 3107, 3259 |
| HapII | CCGG | 8 cut(s) | 106, 116, 247, 2111, 3000, 3135, 3281, 4059 |
| HgaI | GACGC | 1 cut(s) | 912 |
| HhaI | GCGC | 2 cut(s) | 530, 1908 |
| Hin1I | GRCGYC | 1 cut(s) | 923 |
| Hin6I | GCGC | 2 cut(s) | 528, 1906 |
| HinP1I | GCGC | 2 cut(s) | 528, 1906 |
| HincII | GTYRAC | 4 cut(s) | 826, 1402, 1680, 3823 |
| HindII | GTYRAC | 4 cut(s) | 826, 1402, 1680, 3823 |
| HindIII | AAGCTT | 3 cut(s) | 1127, 1385, 1553 |
| HpaI | GTTAAC | 1 cut(s) | 3823 |
| HpaII | CCGG | 8 cut(s) | 106, 116, 247, 2111, 3000, 3135, 3281, 4059 |
| HphI | GGTGA | 8 cut(s) | 133, 292, 977, 1469, 1700, 3593, 3614, 3712 |
| Hpy99I | CGWCG | 2 cut(s) | 277, 332 |
| HpyCH4IV | ACGT | 3 cut(s) | 309, 1645, 1900 |
| HpyF3I | CTNAG | 8 cut(s) | 18, 369, 1667, 1814, 2229, 2520, 2928, 3461 |
| HpySE526I | ACGT | 3 cut(s) | 309, 1645, 1900 |
| Hsp92I | GRCGYC | 1 cut(s) | 923 |
| HspAI | GCGC | 2 cut(s) | 528, 1906 |
| Kpn2I | TCCGGA | 1 cut(s) | 3280 |
| KpnI | GGTACC | 2 cut(s) | 1503, 1842 |
| KroI | GCCGGC | 2 cut(s) | 115, 246 |
| KroNI | GCCGGC | 2 cut(s) | 117, 248 |
| Ksp22I | TGATCA | 2 cut(s) | 2407, 2890 |
| KspAI | GTTAAC | 1 cut(s) | 3823 |
| LmnI | GCTCC | 9 cut(s) | 4, 931, 1982, 2154, 2685, 3240, 3599, 3677, 4286 |
| Lsp1109I | GCAGC | 9 cut(s) | 457, 663, 739, 1221, 2521, 2911, 3191, 3477, 4255 |
| MaeI | CTAG | 5 cut(s) | 1892, 1944, 2088, 2715, 3252 |
| MaeII | ACGT | 3 cut(s) | 309, 1645, 1900 |
| MaeIII | GTNAC | 7 cut(s) | 1109, 1370, 1457, 1492, 2269, 2511, 3700 |
| MfeI | CAATTG | 4 cut(s) | 1431, 1593, 1770, 2756 |
| MflI | RGATCY | 9 cut(s) | 838, 1560, 1602, 1951, 2024, 2911, 3061, 3427, 3755 |
| MlsI | TGGCCA | 3 cut(s) | 2646, 3045, 3231 |
| MluNI | TGGCCA | 3 cut(s) | 2646, 3045, 3231 |
| MlyI | GAGTC | 5 cut(s) | 1071, 1675, 1973, 3451, 4101 |
| MmeI | TCCRAC | 1 cut(s) | 3078 |
| Mox20I | TGGCCA | 3 cut(s) | 2646, 3045, 3231 |
| Mph1103I | ATGCAT | 3 cut(s) | 392, 2467, 4194 |
| MroI | TCCGGA | 1 cut(s) | 3280 |
| MroNI | GCCGGC | 2 cut(s) | 115, 246 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3924 |
| MscI | TGGCCA | 3 cut(s) | 2646, 3045, 3231 |
| MslI | CAYNNNNRTG | 1 cut(s) | 4197 |
| Msp20I | TGGCCA | 3 cut(s) | 2646, 3045, 3231 |
| MspA1I | CMGCKG | 6 cut(s) | 258, 654, 2390, 2534, 3182, 4246 |
| MspI | CCGG | 8 cut(s) | 106, 116, 247, 2111, 3000, 3135, 3281, 4059 |
| MunI | CAATTG | 4 cut(s) | 1431, 1593, 1770, 2756 |
| Mva1269I | GAATGC | 2 cut(s) | 1637, 1985 |
| MvaI | CCWGG | 9 cut(s) | 998, 1188, 1625, 2159, 2327, 2750, 3573, 3989, 4041 |
| MvnI | CGCG | 1 cut(s) | 530 |
| NaeI | GCCGGC | 2 cut(s) | 117, 248 |
| NciI | CCSGG | 4 cut(s) | 2112, 3001, 3135, 4060 |
| NcoI | CCATGG | 2 cut(s) | 740, 3696 |
| NgoMIV | GCCGGC | 2 cut(s) | 115, 246 |
| NmeAIII | GCCGAG | 1 cut(s) | 8 |
| NmuCI | GTSAC | 5 cut(s) | 1109, 1457, 1492, 2269, 3700 |
| NsiI | ATGCAT | 3 cut(s) | 392, 2467, 4194 |
| NspI | RCATGY | 3 cut(s) | 266, 576, 3726 |
| PaeI | GCATGC | 1 cut(s) | 266 |
| PagI | TCATGA | 1 cut(s) | 3489 |
| PaqCI | CACCTGC | 1 cut(s) | 2704 |
| PceI | AGGCCT | 4 cut(s) | 407, 2748, 3016, 4228 |
| PciI | ACATGT | 1 cut(s) | 572 |
| PctI | GAATGC | 2 cut(s) | 1637, 1985 |
| PdiI | GCCGGC | 2 cut(s) | 117, 248 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3924 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2603, 3158 |
| PinAI | ACCGGT | 1 cut(s) | 105 |
| Ple19I | CGATCG | 1 cut(s) | 159 |
| PleI | GAGTC | 5 cut(s) | 1071, 1675, 1972, 3451, 4101 |
| PpsI | GAGTC | 5 cut(s) | 1071, 1675, 1972, 3451, 4101 |
| PpuMI | RGGWCCY | 1 cut(s) | 2329 |
| PscI | ACATGT | 1 cut(s) | 572 |
| PshBI | ATTAAT | 1 cut(s) | 1350 |
| PsiI | TTATAA | 1 cut(s) | 1524 |
| Psp124BI | GAGCTC | 3 cut(s) | 936, 3596, 3674 |
| Psp5II | RGGWCCY | 1 cut(s) | 2329 |
| Psp6I | CCWGG | 9 cut(s) | 996, 1186, 1623, 2157, 2325, 2748, 3571, 3987, 4039 |
| PspEI | GGTNACC | 1 cut(s) | 1457 |
| PspFI | CCCAGC | 4 cut(s) | 254, 654, 2390, 3559 |
| PspGI | CCWGG | 9 cut(s) | 996, 1186, 1623, 2157, 2325, 2748, 3571, 3987, 4039 |
| PspPPI | RGGWCCY | 1 cut(s) | 2329 |
| PsuI | RGATCY | 9 cut(s) | 838, 1560, 1602, 1951, 2024, 2911, 3061, 3427, 3755 |
| PvuI | CGATCG | 1 cut(s) | 159 |
| PvuII | CAGCTG | 4 cut(s) | 654, 2390, 2534, 3182 |
| RigI | GGCCGGCC | 1 cut(s) | 250 |
| RseI | CAYNNNNRTG | 1 cut(s) | 4197 |
| SacI | GAGCTC | 3 cut(s) | 936, 3596, 3674 |
| SchI | GAGTC | 5 cut(s) | 1071, 1675, 1973, 3451, 4101 |
| SfcI | CTRYAG | 3 cut(s) | 2265, 3315, 3543 |
| SinI | GGWCC | 7 cut(s) | 41, 1301, 2329, 2351, 3137, 3965, 4115 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 4197 |
| SmlI | CTYRAG | 3 cut(s) | 8, 627, 1556 |
| SmoI | CTYRAG | 3 cut(s) | 8, 627, 1556 |
| SphI | GCATGC | 1 cut(s) | 266 |
| SseBI | AGGCCT | 4 cut(s) | 407, 2748, 3016, 4228 |
| SspI | AATATT | 1 cut(s) | 4259 |
| SspMI | CTAG | 5 cut(s) | 1892, 1944, 2088, 2715, 3252 |
| SstI | GAGCTC | 3 cut(s) | 936, 3596, 3674 |
| StuI | AGGCCT | 4 cut(s) | 407, 2748, 3016, 4228 |
| StyI | CCWWGG | 9 cut(s) | 267, 740, 1164, 2007, 2018, 2060, 3618, 3696, 4082 |
| TaiI | ACGT | 3 cut(s) | 312, 1648, 1903 |
| TaqI | TCGA | 6 cut(s) | 110, 327, 419, 1011, 1765, 1989 |
| TatI | WGTACW | 6 cut(s) | 494, 1014, 1846, 3401, 3763, 3804 |
| TauI | GCSGC | 7 cut(s) | 85, 140, 253, 1331, 1369, 4095, 4098 |
| TseFI | GTSAC | 5 cut(s) | 1109, 1457, 1492, 2269, 3700 |
| TseI | GCWGC | 9 cut(s) | 470, 651, 752, 1209, 2534, 2924, 3179, 3465, 4243 |
| Tsp45I | GTSAC | 5 cut(s) | 1109, 1457, 1492, 2269, 3700 |
| TspGWI | ACGGA | 5 cut(s) | 75, 1759, 3398, 3719, 4035 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2603, 3158 |
| VpaK11BI | GGWCC | 7 cut(s) | 41, 1301, 2329, 2351, 3137, 3965, 4115 |
| VspI | ATTAAT | 1 cut(s) | 1350 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 1151, 3576, 4236 |
| XapI | RAATTY | 8 cut(s) | 811, 1136, 1446, 1920, 2245, 2525, 2905, 3395 |
| XbaI | TCTAGA | 1 cut(s) | 2087 |
| XceI | RCATGY | 3 cut(s) | 266, 576, 3726 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2333 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3924 |
| XspI | CTAG | 5 cut(s) | 1892, 1944, 2088, 2715, 3252 |
| Zsp2I | ATGCAT | 3 cut(s) | 392, 2467, 4194 |