RchiOBHm_Chr2g0099931

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0007634
Physical Location & Seq
Forward (+)
11948409 .. 11951943
3535 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ47462

Sequence Viewer

Length: 2820 bp
ATGGATCCAAGTTATGTGTCTGAAGACAACACTGGAGAATTAGACAAGAAACAAGGTCCCTACCATTCATTTCATGGCAAGGTCAAAACAAGGAGATCCGTCTTTGGTAGAAAGGGAAGGGAATCTTTCTCTCCACGAAGGGAAGGTGGTATTTCAAATAATAGTGGAAGCAAGGCACAGAACAATCAAGTTAGAGAAGCATTGGGTATAAATGGATTGAATACAACAGCCAACCAGGCTAATCATTCTGGTTTGGTTCGTTGTGGTAGGAATAATGAGTCAGCGGTCGAATCTAATATATCTTCTGAGGTTGCATCAGAAAATTCATCAATGTCCTTTTCTGCAGTGATGAAGGCAAACCTACCTGTTGAGAGTTTTGAGATGGAGAAGATTTGGCACTACCAGGACCCCGCTGGAAAAGTTCAAGGACCATTTGCTATGGTACAGTTGTGCAAATGGGGTACAACTGGATTCTTCCCTCCAGATCATCGAATATGGAGGATAAATGAGAATCAGGATGACTCCATCCTTTTCACTGATGCATTGAAGGGGCAGTACTGTAAAAAACCATTGTTGCCACAGGACAGCAACATACAGTCTGAGGGATTGAAAGTTGCCTTGGATGGAAGAAACAATGTCTTGGATGGTGGATGGAACAAGAGTATGAATGCAACTCCGATAGATGGTAGAAAGGTTGAAGAGAGCTGGAACACAAAGCAACATGGTCAAAGCTTGCAGAATGGTGGTAATACTGAAGTTGTAAGGAGCAATACACCTGCAGATGCTGTCAATTCCAATGAGAAACAAACTGGAATCCATAATAGTGGTAATACTGAAGTTGTAAGGAGCAGTACACCTGCAGATGCTGTCAATTCCAATGAGAAACAAACTGGAATCCATAATAATGGCAATACTGAAGTTCTAAGGAGCAGTACACCTGCAGATGCTGTCAATTCTAATGAGAAGCAAACTGGAATCCATTTACAAGGATGTGAGTCAGTGAAGGTTGATATTTCTTTGACCAATCAGCCCCAAGAGTGTAGTTCACTAACTTCGCCTGTGTTGTCTGTGAAACCATATGAAACCCTGTCGCACCAAGAAGGGGAGGGTACAACTGAAAACGACTCTCATCAGAAGAATGGAACTGTGGATTGGCAACAGACTACTCGGGATCAAATGAATAATGAACAAGAACAAGATGAGAAGGGACGTGATTTTCCCAGTCTCGCTCCAAAACCAAGCAATGGAGACTTGCGAGGTCAGGCTTCTGAAAATAATCAGTCTCTGTCTTCAAATCTTCCTGTTCAGGATGGAGGACATAGCTGGAGTGGTTCTAATTTAGTTGGTGGTGGGGAACAACTTCACAAAGTAACTGGTGATTGGGGTGGGTATTCCCCAACCCCAGCCAAACCTTCTGTTGAGGAATGGGACTCCAGTCTTGTGTCTGCATCTTCTCTTAAACCAAGCGAGATGCCCAGTGATTACGTTGCCGCTCCTGTTTCAGTGAGTGGACAGCTGACTGAACCCATCCCTTCCCATCCTACCTCTATTGCATCTAGTTGGCAGGAAATTCTTACTGAAACCAATGAGTTTTGCACTTTAGCTGCTGATGAGTCAGTTTCAGATCTTCTGGCTGAAGTTGAAGCTATGGAGTCCCTGTGTGGCTTGGCTACCCCAACATCGACCATGAATTGTGGAGGGGAATTTACAGAGGGTTCAAAAAACGATAGCATCAGTTCTGAAGAGGGATTCAGCCCGGCACCTGAACCTGGAAAAGGTGATGCTTTAAGCTCGACATGCGATTTACAGTTGTCCGAAGCAATGGTGACAGATGAACCACTTGGGGCACGTCAGGCAAGCATTCTTGATCTACAACAAAGGTCTGGTGTGCATTCTTCCACAAGCCCTGAATTGCACGGAGACAGAAAGCCTAGTGATGTTTCAGTTAATGAACTGGAGGCAAATGCTTCAGTTGATCGATTGGAGGCAAATGTTTCAGTTGATCAATTGGAGGCAAATGTTTCAGTTGACCAAATGGAGGCAGGTGAGATCCCAACGACTGCTCCATCCAAGGAATGTTGGGACATGTCTAGTACAGACAATCCATGGAAAGCTAGGTTAGAAAGCAGAAAAACCAGTTTGGAAGCAGTTCAGGGAAATATAAATGCGAATTGGGGAGGATCAGACCCTGGAGGCACAAATGTGCTTGATCTACAGCAGAATTCGGGGGTACATTCATCCACAAGCACAGAAGTGCGGAGAAAGCCTAGTAATGTTTCAGTTAATCAACTGGAGGCAAATGTTTCAGTTAACCAATTGGAGCCAGGTGAAATCCAGATCACCGCACCATCCAAGGAAAGTTGGGACATGTCTACTGCAGACAATCCTTGGAAACCTAGGTTAGAAAGCAGAGAAACCAGTTGCGAAGCAGTTCAGGGAAATGTAAACGCTGGCTGGGGAGGAGACCGAGGAAGTACAAATATGGGTTGGAGAGGACCAGACCCGGGAAGTGCAAATGTGGGTTGGAGAGGAGGTCAGGGAACAATACAGGGAAACACAGGTGCTTCTGCCGGAGGGATGTGGGAAGGCCAGTCAAGATACGGAGGAGACAAATCCTCTGGTCCAAGAGGCCGGGGTTTTCCAAGTAGGGATAATATAGGTTTTGGTAAGGGTAGGTTTGTAGGGAACAGGCAGGCATTATATGGTAATGGGAATGGAGGAGGTTCATTCAGGCCGCCTCCTCGAGGCCAGCGGGTTTGTAAATATCATGAAAGTGGGTATTGCAAGAAGGGAGCATCGTGTAGTTACTTGCACCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GYF Plus-3 SWIB zf-CCCH

Protein Analysis

939

Amino Acids

100.62

Weight (kDa)

5.04

Isoelectric Point (pI)

45.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GYF PF02213 132 - 172 2.4e-09 GYF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 4 cut(s) 784, 865, 946, 2033
AbsI CCTCGAGG 1 cut(s) 2742
Acc36I ACCTGC 4 cut(s) 784, 865, 946, 2033
AccB1I GGYRCC 1 cut(s) 1759
AccB7I CCANNNNNTGG 1 cut(s) 1244
AccBSI CCGCTC 1 cut(s) 1493
AccI GTMKAC 1 cut(s) 2372
AciI CCGC 7 cut(s) 284, 411, 1491, 2257, 2343, 2735, 2752
AclWI GGATC 5 cut(s) 12, 90, 1179, 2044, 2188
AcsI RAATTY 4 cut(s) 322, 1569, 1703, 2221
AcuI CTGAAG 7 cut(s) 42, 774, 855, 936, 1656, 1761, 1953
AfaI GTAC 9 cut(s) 444, 463, 557, 853, 934, 1111, 2095, 2232, 2476
AfiI CCNNNNNNNGG 8 cut(s) 683, 1102, 1244, 1769, 1775, 2038, 2504, 2744
AflIII ACRYGT 2 cut(s) 2085, 2367
AgsI TTSAA 9 cut(s) 156, 220, 425, 547, 610, 698, 1293, 1643, 1719
AjiI CACGTC 2 cut(s) 1211, 1850
AjnI CCWGG 5 cut(s) 234, 402, 1768, 2188, 2323
AjuI GAANNNNNNNTTGG 4 cut(s) 602, 634, 1135, 1167
AleI CACNNNNGTG 2 cut(s) 2201, 2252
AluBI AGCT 8 cut(s) 705, 732, 1323, 1516, 1604, 1646, 1791, 2114
AluI AGCT 8 cut(s) 705, 732, 1323, 1516, 1604, 1646, 1791, 2114
Alw26I GTCTC 6 cut(s) 1229, 1242, 1287, 1914, 2457, 2601
AlwI GGATC 5 cut(s) 12, 90, 1179, 2044, 2188
AlwNI CAGNNNCTG 5 cut(s) 785, 866, 947, 1285, 2189
Ama87I CYCGRG 3 cut(s) 1167, 2503, 2742
AoxI GGCC 4 cut(s) 2587, 2629, 2732, 2746
ApeKI GCWGC 1 cut(s) 1604
ApoI RAATTY 4 cut(s) 322, 1569, 1703, 2221
Asp700I GAANNNNTTC 3 cut(s) 1359, 2148, 2430
AspA2I CCTAGG 1 cut(s) 2396
AspS9I GGNCC 5 cut(s) 56, 406, 428, 2495, 2621
AsuC2I CCSGG 4 cut(s) 1757, 2504, 2505, 2633
AsuHPI GGTGA 6 cut(s) 1388, 1790, 1837, 2057, 2332, 2339
AvaI CYCGRG 3 cut(s) 1167, 2503, 2742
AvaII GGWCC 5 cut(s) 56, 406, 428, 2495, 2621
AvrII CCTAGG 1 cut(s) 2396
BaeGI GKGCMC 1 cut(s) 1849
BaeI ACNNNNGTAYC 2 cut(s) 434, 467
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 1 cut(s) 1759
BarI GAAGNNNNNNTAC 2 cut(s) 539, 571
BbsI GAAGAC 2 cut(s) 30, 1281
BbvI GCAGC 1 cut(s) 1591
BciT130I CCWGG 5 cut(s) 236, 404, 1770, 2190, 2325
BclI TGATCA 1 cut(s) 2002
BcnI CCSGG 4 cut(s) 1757, 2504, 2505, 2633
BcoDI GTCTC 6 cut(s) 1229, 1242, 1287, 1914, 2457, 2601
BfaI CTAG 6 cut(s) 1557, 1932, 2091, 2115, 2268, 2397
BfmI CTRYAG 6 cut(s) 342, 777, 858, 939, 2213, 2376
BfuAI ACCTGC 4 cut(s) 784, 865, 946, 2033
BglI GCCNNNNNGGC 1 cut(s) 236
BglII AGATCT 1 cut(s) 1624
BisI GCNGC 3 cut(s) 1491, 1605, 2735
BlnI CCTAGG 1 cut(s) 2396
BlsI GCNGC 3 cut(s) 1492, 1606, 2736
BmcAI AGTACT 1 cut(s) 557
Bme1390I CCNGG 9 cut(s) 236, 404, 1757, 1770, 2190, 2325, 2504, 2505, 2633
Bme18I GGWCC 5 cut(s) 56, 406, 428, 2495, 2621
BmeT110I CYCGRG 3 cut(s) 1167, 2503, 2742
BmgBI CACGTC 2 cut(s) 1211, 1850
BmgT120I GGNCC 5 cut(s) 56, 406, 428, 2495, 2621
BmiI GGNNCC 5 cut(s) 6, 58, 408, 1761, 2322
BmrFI CCNGG 9 cut(s) 236, 404, 1757, 1770, 2190, 2325, 2504, 2505, 2633
BmrI ACTGGG 2 cut(s) 1215, 1470
BmuI ACTGGG 2 cut(s) 1215, 1470
BoxI GACNNNNGTC 1 cut(s) 1434
BpiI GAAGAC 2 cut(s) 30, 1281
BpmI CTGGAG 7 cut(s) 54, 465, 1345, 1417, 1976, 2211, 2312
BpuMI CCSGG 4 cut(s) 1757, 2504, 2505, 2633
Bsa29I ATCGAT 1 cut(s) 1978
BsaI GGTCTC 1 cut(s) 2457
BsaXI ACNNNNNCTCC 6 cut(s) 1643, 1673, 2047, 2077, 2518, 2548
Bsc4I CCNNNNNNNGG 8 cut(s) 683, 1102, 1244, 1769, 1775, 2038, 2504, 2744
Bse3DI GCAATG 2 cut(s) 1249, 1827
BseBI CCWGG 5 cut(s) 236, 404, 1770, 2190, 2325
BseCI ATCGAT 1 cut(s) 1978
BseLI CCNNNNNNNGG 8 cut(s) 683, 1102, 1244, 1769, 1775, 2038, 2504, 2744
BseMI GCAATG 2 cut(s) 1249, 1827
BseMII CTCAG 2 cut(s) 297, 591
BseRI GAGGAG 5 cut(s) 2475, 2544, 2619, 2730, 2733
BseSI GKGCMC 1 cut(s) 1849
BseXI GCAGC 1 cut(s) 1591
BseYI CCCAGC 2 cut(s) 1402, 2454
Bsh1285I CGRYCG 1 cut(s) 288
BshFI GGCC 4 cut(s) 2589, 2631, 2734, 2748
BshNI GGYRCC 1 cut(s) 1759
BshVI ATCGAT 1 cut(s) 1978
BsiEI CGRYCG 1 cut(s) 288
BsiHKCI CYCGRG 3 cut(s) 1167, 2503, 2742
BsiSI CCGG 4 cut(s) 1757, 2504, 2571, 2632
BslFI GGGAC 6 cut(s) 42, 1221, 1442, 1639, 2096, 2378
BslI CCNNNNNNNGG 8 cut(s) 683, 1102, 1244, 1769, 1775, 2038, 2504, 2744
BsmAI GTCTC 6 cut(s) 1229, 1242, 1287, 1914, 2457, 2601
BsmFI GGGAC 6 cut(s) 42, 1221, 1442, 1639, 2096, 2378
BsmI GAATGC 3 cut(s) 673, 1860, 1891
BsnI GGCC 4 cut(s) 2589, 2631, 2734, 2748
Bso31I GGTCTC 1 cut(s) 2457
BsoBI CYCGRG 3 cut(s) 1167, 2503, 2742
Bsp1286I GDGCHC 1 cut(s) 1849
Bsp19I CCATGG 1 cut(s) 2105
BspACI CCGC 7 cut(s) 284, 411, 1491, 2257, 2343, 2735, 2752
BspANI GGCC 4 cut(s) 2589, 2631, 2734, 2748
BspCNI CTCAG 2 cut(s) 298, 592
BspDI ATCGAT 1 cut(s) 1978
BspHI TCATGA 1 cut(s) 2767
BspLI GGNNCC 5 cut(s) 6, 58, 408, 1761, 2322
BspMAI CTGCAG 5 cut(s) 346, 781, 862, 943, 2380
BspMI ACCTGC 4 cut(s) 784, 865, 946, 2033
BspPI GGATC 5 cut(s) 12, 90, 1179, 2044, 2188
BspT107I GGYRCC 1 cut(s) 1759
BspTNI GGTCTC 1 cut(s) 2457
BsrBI CCGCTC 1 cut(s) 1493
BsrDI GCAATG 2 cut(s) 1249, 1827
BssT1I CCWWGG 6 cut(s) 618, 2070, 2105, 2352, 2387, 2396
Bst2UI CCWGG 5 cut(s) 236, 404, 1770, 2190, 2325
Bst4CI ACNGT 5 cut(s) 447, 560, 597, 1147, 1809
Bst6I CTCTTC 2 cut(s) 693, 1737
BstC8I GCNNGC 5 cut(s) 734, 1858, 2452, 2694, 2750
BstDEI CTNAG 3 cut(s) 306, 600, 923
BstDSI CCRYGG 1 cut(s) 2105
BstENI CCTNNNNNAGG 2 cut(s) 1773, 2742
BstMAI GTCTC 6 cut(s) 1229, 1242, 1287, 1914, 2457, 2601
BstMCI CGRYCG 1 cut(s) 288
BstMWI GCNNNNNNNGC 4 cut(s) 236, 1797, 1853, 2263
BstNI CCWGG 5 cut(s) 236, 404, 1770, 2190, 2325
BstNSI RCATGY 3 cut(s) 1800, 2089, 2371
BstPAI GACNNNNGTC 1 cut(s) 1434
BstSCI CCNGG 9 cut(s) 234, 402, 1755, 1768, 2188, 2323, 2502, 2503, 2631
BstSFI CTRYAG 6 cut(s) 342, 777, 858, 939, 2213, 2376
BstSLI GKGCMC 1 cut(s) 1849
BstV1I GCAGC 1 cut(s) 1591
BstV2I GAAGAC 2 cut(s) 30, 1281
BstX2I RGATCY 4 cut(s) 4, 95, 1624, 2049
BstXI CCANNNNNNTGG 2 cut(s) 824, 905
BstYI RGATCY 4 cut(s) 4, 95, 1624, 2049
Bsu15I ATCGAT 1 cut(s) 1978
BsuRI GGCC 4 cut(s) 2589, 2631, 2734, 2748
BsuTUI ATCGAT 1 cut(s) 1978
BtgI CCRYGG 1 cut(s) 2105
BtrI CACGTC 2 cut(s) 1211, 1850
BtsI GCAGTG 1 cut(s) 351
BtsIMutI CAGTG 6 cut(s) 30, 351, 534, 1005, 1483, 1509
BveI ACCTGC 4 cut(s) 784, 865, 946, 2033
Cac8I GCNNGC 5 cut(s) 734, 1858, 2452, 2694, 2750
CaiI CAGNNNCTG 5 cut(s) 785, 866, 947, 1285, 2189
CciI TCATGA 1 cut(s) 2767
Cfr13I GGNCC 5 cut(s) 56, 406, 428, 2495, 2621
Cfr9I CCCGGG 1 cut(s) 2503
ClaI ATCGAT 1 cut(s) 1978
Csp6I GTAC 9 cut(s) 443, 462, 556, 852, 933, 1110, 2094, 2231, 2475
CviAII CATG 9 cut(s) 74, 722, 1687, 1797, 2086, 2106, 2368, 2768, 2817
CviQI GTAC 9 cut(s) 443, 462, 556, 852, 933, 1110, 2094, 2231, 2475
DdeI CTNAG 3 cut(s) 306, 600, 923
Eam1104I CTCTTC 2 cut(s) 693, 1737
EarI CTCTTC 2 cut(s) 693, 1737
Eco130I CCWWGG 6 cut(s) 618, 2070, 2105, 2352, 2387, 2396
Eco31I GGTCTC 1 cut(s) 2457
Eco47I GGWCC 5 cut(s) 56, 406, 428, 2495, 2621
Eco57I CTGAAG 7 cut(s) 42, 774, 855, 936, 1656, 1761, 1953
Eco88I CYCGRG 3 cut(s) 1167, 2503, 2742
EcoNI CCTNNNNNAGG 2 cut(s) 1773, 2742
EcoO109I RGGNCCY 2 cut(s) 56, 406
EcoRI GAATTC 1 cut(s) 2221
EcoRII CCWGG 5 cut(s) 234, 402, 1768, 2188, 2323
EcoT14I CCWWGG 6 cut(s) 618, 2070, 2105, 2352, 2387, 2396
EcoT22I ATGCAT 1 cut(s) 544
ErhI CCWWGG 6 cut(s) 618, 2070, 2105, 2352, 2387, 2396
FaeI CATG 9 cut(s) 77, 725, 1690, 1800, 2089, 2109, 2371, 2771, 2820
FalI AAGNNNNNCTT 2 cut(s) 109, 141
FaqI GGGAC 6 cut(s) 42, 1221, 1442, 1639, 2096, 2378
FatI CATG 9 cut(s) 73, 721, 1686, 1796, 2085, 2105, 2367, 2767, 2816
FauI CCCGC 2 cut(s) 418, 2745
FauNDI CATATG 1 cut(s) 1078
FbaI TGATCA 1 cut(s) 2002
FblI GTMKAC 1 cut(s) 2372
Fnu4HI GCNGC 3 cut(s) 1491, 1605, 2735
Fsp4HI GCNGC 3 cut(s) 1491, 1605, 2735
FspBI CTAG 6 cut(s) 1557, 1932, 2091, 2115, 2268, 2397
GluI GCNGC 3 cut(s) 1491, 1605, 2735
GsaI CCCAGC 2 cut(s) 1406, 2458
GsuI CTGGAG 7 cut(s) 54, 465, 1345, 1417, 1976, 2211, 2312
HaeIII GGCC 4 cut(s) 2589, 2631, 2734, 2748
HapII CCGG 4 cut(s) 1757, 2504, 2571, 2632
Hin1II CATG 9 cut(s) 77, 725, 1690, 1800, 2089, 2109, 2371, 2771, 2820
HincII GTYRAC 2 cut(s) 2029, 2311
HindII GTYRAC 2 cut(s) 2029, 2311
HindIII AAGCTT 1 cut(s) 730
HpaI GTTAAC 1 cut(s) 2311
HpaII CCGG 4 cut(s) 1757, 2504, 2571, 2632
HphI GGTGA 6 cut(s) 1388, 1790, 1837, 2057, 2332, 2339
Hpy166II GTNNAC 8 cut(s) 854, 935, 1046, 1511, 2029, 2311, 2373, 2446
Hpy188III TCNNGA 8 cut(s) 482, 515, 1169, 1307, 1865, 2335, 2595, 2768
Hpy8I GTNNAC 8 cut(s) 854, 935, 1046, 1511, 2029, 2311, 2373, 2446
HpyCH4III ACNGT 5 cut(s) 447, 560, 597, 1147, 1809
HpyCH4IV ACGT 3 cut(s) 1210, 1485, 1849
HpyF10VI GCNNNNNNNGC 4 cut(s) 236, 1797, 1853, 2263
HpyF3I CTNAG 3 cut(s) 306, 600, 923
HpySE526I ACGT 3 cut(s) 1210, 1485, 1849
Hsp92II CATG 9 cut(s) 77, 725, 1690, 1800, 2089, 2109, 2371, 2771, 2820
Ksp22I TGATCA 1 cut(s) 2002
KspAI GTTAAC 1 cut(s) 2311
LmnI GCTCC 8 cut(s) 765, 846, 927, 1234, 1498, 2068, 2320, 2792
Lsp1109I GCAGC 1 cut(s) 1591
MaeI CTAG 6 cut(s) 1557, 1932, 2091, 2115, 2268, 2397
MaeII ACGT 3 cut(s) 1210, 1485, 1849
MaeIII GTNAC 3 cut(s) 1369, 1825, 2804
MbiI CCGCTC 1 cut(s) 1493
MfeI CAATTG 2 cut(s) 2006, 2315
MflI RGATCY 4 cut(s) 4, 95, 1624, 2049
MhlI GDGCHC 1 cut(s) 1849
MlyI GAGTC 7 cut(s) 287, 515, 1004, 1118, 1424, 1622, 1661
MmeI TCCRAC 2 cut(s) 2468, 2504
Mph1103I ATGCAT 1 cut(s) 544
MroXI GAANNNNTTC 3 cut(s) 1359, 2148, 2430
MseI TTAA 5 cut(s) 1458, 1787, 1947, 2283, 2310
MslI CAYNNNNRTG 5 cut(s) 822, 903, 2201, 2252, 2772
MspA1I CMGCKG 4 cut(s) 284, 413, 1516, 2752
MspI CCGG 4 cut(s) 1757, 2504, 2571, 2632
MspR9I CCNGG 9 cut(s) 236, 404, 1757, 1770, 2190, 2325, 2504, 2505, 2633
MunI CAATTG 2 cut(s) 2006, 2315
Mva1269I GAATGC 3 cut(s) 673, 1860, 1891
MvaI CCWGG 5 cut(s) 236, 404, 1770, 2190, 2325
MwoI GCNNNNNNNGC 4 cut(s) 236, 1797, 1853, 2263
NciI CCSGG 4 cut(s) 1757, 2504, 2505, 2633
NcoI CCATGG 1 cut(s) 2105
NdeI CATATG 1 cut(s) 1078
NlaIII CATG 9 cut(s) 77, 725, 1690, 1800, 2089, 2109, 2371, 2771, 2820
NlaIV GGNNCC 5 cut(s) 6, 58, 408, 1761, 2322
NmuCI GTSAC 1 cut(s) 1825
NsiI ATGCAT 1 cut(s) 544
NspI RCATGY 3 cut(s) 1800, 2089, 2371
OliI CACNNNNGTG 2 cut(s) 2201, 2252
PaeR7I CTCGAG 1 cut(s) 2742
PagI TCATGA 1 cut(s) 2767
PaqCI CACCTGC 4 cut(s) 784, 865, 946, 2033
PciI ACATGT 2 cut(s) 2085, 2367
PctI GAATGC 3 cut(s) 673, 1860, 1891
PdmI GAANNNNTTC 3 cut(s) 1359, 2148, 2430
PfeI GAWTC 8 cut(s) 122, 290, 471, 511, 813, 894, 975, 1749
PflMI CCANNNNNTGG 1 cut(s) 1244
PkrI GCNGC 3 cut(s) 1492, 1606, 2736
PleI GAGTC 7 cut(s) 286, 515, 1003, 1118, 1424, 1621, 1660
PpsI GAGTC 7 cut(s) 286, 515, 1003, 1118, 1424, 1621, 1660
PpuMI RGGWCCY 2 cut(s) 56, 406
PscI ACATGT 2 cut(s) 2085, 2367
PshAI GACNNNNGTC 1 cut(s) 1434
Psp5II RGGWCCY 2 cut(s) 56, 406
Psp6I CCWGG 5 cut(s) 234, 402, 1768, 2188, 2323
PspFI CCCAGC 2 cut(s) 1402, 2454
PspGI CCWGG 5 cut(s) 234, 402, 1768, 2188, 2323
PspN4I GGNNCC 5 cut(s) 6, 58, 408, 1761, 2322
PspPI GGNCC 5 cut(s) 56, 406, 428, 2495, 2621
PspPPI RGGWCCY 2 cut(s) 56, 406
PspXI VCTCGAGB 1 cut(s) 2742
PstI CTGCAG 5 cut(s) 346, 781, 862, 943, 2380
PstNI CAGNNNCTG 5 cut(s) 785, 866, 947, 1285, 2189
PsuI RGATCY 4 cut(s) 4, 95, 1624, 2049
PvuII CAGCTG 1 cut(s) 1516
RsaI GTAC 9 cut(s) 444, 463, 557, 853, 934, 1111, 2095, 2232, 2476
RsaNI GTAC 9 cut(s) 443, 462, 556, 852, 933, 1110, 2094, 2231, 2475
RseI CAYNNNNRTG 5 cut(s) 822, 903, 2201, 2252, 2772
SaqAI TTAA 5 cut(s) 1458, 1787, 1947, 2283, 2310
SatI GCNGC 3 cut(s) 1491, 1605, 2735
Sau96I GGNCC 5 cut(s) 56, 406, 428, 2495, 2621
ScaI AGTACT 1 cut(s) 557
SchI GAGTC 7 cut(s) 287, 515, 1004, 1118, 1424, 1622, 1661
ScrFI CCNGG 9 cut(s) 236, 404, 1757, 1770, 2190, 2325, 2504, 2505, 2633
SduI GDGCHC 1 cut(s) 1849
SfcI CTRYAG 6 cut(s) 342, 777, 858, 939, 2213, 2376
Sfr274I CTCGAG 1 cut(s) 2742
SinI GGWCC 5 cut(s) 56, 406, 428, 2495, 2621
SlaI CTCGAG 1 cut(s) 2742
SmaI CCCGGG 1 cut(s) 2505
SmiMI CAYNNNNRTG 5 cut(s) 822, 903, 2201, 2252, 2772
SmlI CTYRAG 1 cut(s) 2742
SmoI CTYRAG 1 cut(s) 2742
SsiI CCGC 7 cut(s) 284, 411, 1491, 2257, 2343, 2735, 2752
SspMI CTAG 6 cut(s) 1557, 1932, 2091, 2115, 2268, 2397
StyD4I CCNGG 9 cut(s) 234, 402, 1755, 1768, 2188, 2323, 2502, 2503, 2631
StyI CCWWGG 6 cut(s) 618, 2070, 2105, 2352, 2387, 2396
TaaI ACNGT 5 cut(s) 447, 560, 597, 1147, 1809
TaiI ACGT 3 cut(s) 1213, 1488, 1852
TaqI TCGA 6 cut(s) 288, 490, 1682, 1793, 1978, 2743
TaqII GACCGA 1 cut(s) 2481
TatI WGTACW 5 cut(s) 555, 851, 932, 2093, 2474
TauI GCSGC 2 cut(s) 1493, 2737
TfiI GAWTC 8 cut(s) 122, 290, 471, 511, 813, 894, 975, 1749
Tru1I TTAA 5 cut(s) 1458, 1787, 1947, 2283, 2310
Tru9I TTAA 5 cut(s) 1458, 1787, 1947, 2283, 2310
TscAI CASTG 6 cut(s) 37, 351, 541, 1005, 1483, 1509
TseFI GTSAC 1 cut(s) 1825
TseI GCWGC 1 cut(s) 1604
Tsp45I GTSAC 1 cut(s) 1825
TspGWI ACGGA 3 cut(s) 88, 1932, 2616
TspMI CCCGGG 1 cut(s) 2503
TspRI CASTG 6 cut(s) 37, 351, 541, 1005, 1483, 1509
Van91I CCANNNNNTGG 1 cut(s) 1244
VpaK11BI GGWCC 5 cut(s) 56, 406, 428, 2495, 2621
XagI CCTNNNNNAGG 2 cut(s) 1773, 2742
XapI RAATTY 4 cut(s) 322, 1569, 1703, 2221
XceI RCATGY 3 cut(s) 1800, 2089, 2371
XcmI CCANNNNNNNNNTGG 2 cut(s) 71, 410
XhoI CTCGAG 1 cut(s) 2742
XmaI CCCGGG 1 cut(s) 2503
XmaJI CCTAGG 1 cut(s) 2396
XmiI GTMKAC 1 cut(s) 2372
XmnI GAANNNNTTC 3 cut(s) 1359, 2148, 2430
XspI CTAG 6 cut(s) 1557, 1932, 2091, 2115, 2268, 2397
ZrmI AGTACT 1 cut(s) 557
Zsp2I ATGCAT 1 cut(s) 544
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.