zinc finger CCCH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G18090 AT2G18090 AT3G51120 |
| fragaria_vesca | FvH4_1g12170 FvH4_1g12170 |
| malus_domestica | MD02G1135700.v1.1 MD15G1249200.v1.1 |
| prunus_persica | Prupe.7G165000_v2.0.a1 Prupe.7G165000_v2.0.a1 Prupe.7G165000_v2.0.a1 |
| pyrus_communis | pycom02g10700 pycom15g21940 |
| rosa_chinensis | RchiOBHm_Chr2g0099921 RchiOBHm_Chr2g0099931 |
| rosa_laevigata | RLG00000016923 |
| rosa_multiflora | Rmu_sc0008864.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00142730 |
| rosa_rugosa | Rorug02G0084000 Rorug02G0084100 |
| rosa_samantha | Rh2AG133000 Rh2BG136500 Rh2CG138100 Rh2DG138500 |
| rosa_wichuraiana | Rw2G010350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 680 |
| AarI | CACCTGC | 5 cut(s) | 2200, 2281, 2362, 2686, 3593 |
| AatII | GACGTC | 1 cut(s) | 428 |
| AbsI | CCTCGAGG | 1 cut(s) | 4302 |
| Acc36I | ACCTGC | 5 cut(s) | 2200, 2281, 2362, 2686, 3593 |
| AccB1I | GGYRCC | 2 cut(s) | 1296, 3319 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2804 |
| AccBSI | CCGCTC | 1 cut(s) | 3053 |
| AccI | GTMKAC | 1 cut(s) | 3932 |
| AccII | CGCG | 3 cut(s) | 567, 695, 1404 |
| AclWI | GGATC | 8 cut(s) | 397, 1421, 1433, 1446, 1506, 2595, 3604, 3748 |
| AcsI | RAATTY | 9 cut(s) | 379, 935, 975, 1145, 1407, 1738, 3129, 3263, 3781 |
| AcuI | CTGAAG | 9 cut(s) | 456, 1065, 1476, 2190, 2271, 2352, 3216, 3321, 3513 |
| AcyI | GRCGYC | 1 cut(s) | 425 |
| AflIII | ACRYGT | 4 cut(s) | 92, 806, 3645, 3927 |
| AjiI | CACGTC | 2 cut(s) | 2771, 3410 |
| AjnI | CCWGG | 7 cut(s) | 525, 1152, 1650, 1818, 3328, 3748, 3883 |
| AleI | CACNNNNGTG | 3 cut(s) | 1302, 3761, 3812 |
| Alw21I | GWGCWC | 2 cut(s) | 243, 465 |
| Alw26I | GTCTC | 7 cut(s) | 2738, 2789, 2802, 2847, 3474, 4017, 4161 |
| AlwI | GGATC | 8 cut(s) | 397, 1421, 1433, 1446, 1506, 2595, 3604, 3748 |
| AlwNI | CAGNNNCTG | 6 cut(s) | 1369, 2201, 2282, 2363, 2845, 3749 |
| Ama87I | CYCGRG | 3 cut(s) | 2583, 4063, 4302 |
| AoxI | GGCC | 4 cut(s) | 4147, 4189, 4292, 4306 |
| ApeKI | GCWGC | 7 cut(s) | 171, 272, 275, 374, 857, 1274, 3164 |
| ApoI | RAATTY | 9 cut(s) | 379, 935, 975, 1145, 1407, 1738, 3129, 3263, 3781 |
| AseI | ATTAAT | 1 cut(s) | 879 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 2919, 3708, 3990 |
| AspA2I | CCTAGG | 1 cut(s) | 3956 |
| AspLEI | GCGC | 2 cut(s) | 900, 1404 |
| AspS9I | GGNCC | 6 cut(s) | 364, 1029, 1822, 1844, 4055, 4181 |
| AsuC2I | CCSGG | 4 cut(s) | 3317, 4064, 4065, 4193 |
| AvaI | CYCGRG | 3 cut(s) | 2583, 4063, 4302 |
| AvaII | GGWCC | 6 cut(s) | 364, 1029, 1822, 1844, 4055, 4181 |
| AvrII | CCTAGG | 1 cut(s) | 3956 |
| BaeGI | GKGCMC | 1 cut(s) | 3409 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1850, 1883 |
| BamHI | GGATCC | 1 cut(s) | 1438 |
| BanI | GGYRCC | 2 cut(s) | 1296, 3319 |
| BanII | GRGCYC | 2 cut(s) | 243, 465 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1955, 1987 |
| BbsI | GAAGAC | 3 cut(s) | 1464, 2643, 2841 |
| Bbv12I | GWGCWC | 2 cut(s) | 243, 465 |
| BbvCI | CCTCAGC | 2 cut(s) | 1278, 1340 |
| BbvI | GCAGC | 7 cut(s) | 183, 259, 262, 386, 869, 1286, 3151 |
| BceAI | ACGGC | 1 cut(s) | 1304 |
| BciT130I | CCWGG | 7 cut(s) | 527, 1154, 1652, 1820, 3330, 3750, 3885 |
| BciVI | GTATCC | 2 cut(s) | 195, 511 |
| BclI | TGATCA | 5 cut(s) | 988, 1126, 1138, 1197, 3562 |
| BcnI | CCSGG | 4 cut(s) | 3317, 4064, 4065, 4193 |
| BcoDI | GTCTC | 7 cut(s) | 2738, 2789, 2802, 2847, 3474, 4017, 4161 |
| BfaI | CTAG | 9 cut(s) | 368, 405, 981, 3117, 3492, 3651, 3675, 3828, 3957 |
| BfmI | CTRYAG | 6 cut(s) | 1758, 2193, 2274, 2355, 3773, 3936 |
| BfuAI | ACCTGC | 5 cut(s) | 2200, 2281, 2362, 2686, 3593 |
| BfuI | GTATCC | 2 cut(s) | 195, 511 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1652 |
| BglII | AGATCT | 2 cut(s) | 1131, 3184 |
| BlnI | CCTAGG | 1 cut(s) | 3956 |
| BmcAI | AGTACT | 1 cut(s) | 1973 |
| Bme18I | GGWCC | 6 cut(s) | 364, 1029, 1822, 1844, 4055, 4181 |
| BmeT110I | CYCGRG | 3 cut(s) | 2583, 4063, 4302 |
| BmgBI | CACGTC | 2 cut(s) | 2771, 3410 |
| BmgT120I | GGNCC | 6 cut(s) | 364, 1029, 1822, 1844, 4055, 4181 |
| BmiI | GGNNCC | 6 cut(s) | 1030, 1298, 1440, 1824, 3321, 3882 |
| BmrI | ACTGGG | 2 cut(s) | 2775, 3030 |
| BmuI | ACTGGG | 2 cut(s) | 2775, 3030 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2994 |
| BpiI | GAAGAC | 3 cut(s) | 1464, 2643, 2841 |
| BpmI | CTGGAG | 9 cut(s) | 560, 738, 1488, 1881, 2905, 2977, 3536, 3771, 3872 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1278, 1292, 1340 |
| BpuEI | CTTGAG | 2 cut(s) | 132, 929 |
| BpuMI | CCSGG | 4 cut(s) | 3317, 4064, 4065, 4193 |
| Bsa29I | ATCGAT | 1 cut(s) | 3538 |
| BsaAI | YACGTR | 1 cut(s) | 809 |
| BsaHI | GRCGYC | 1 cut(s) | 425 |
| BsaI | GGTCTC | 1 cut(s) | 4017 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 3203, 3233, 3607, 3637, 4078, 4108 |
| Bse3DI | GCAATG | 3 cut(s) | 1242, 2809, 3387 |
| BseBI | CCWGG | 7 cut(s) | 527, 1154, 1652, 1820, 3330, 3750, 3885 |
| BseCI | ATCGAT | 1 cut(s) | 3538 |
| BseMI | GCAATG | 3 cut(s) | 1242, 2809, 3387 |
| BseMII | CTCAG | 7 cut(s) | 527, 593, 622, 1269, 1331, 1713, 2007 |
| BseRI | GAGGAG | 6 cut(s) | 312, 4035, 4104, 4179, 4290, 4293 |
| BseSI | GKGCMC | 1 cut(s) | 3409 |
| BseXI | GCAGC | 7 cut(s) | 183, 259, 262, 386, 869, 1286, 3151 |
| BseYI | CCCAGC | 3 cut(s) | 174, 2962, 4014 |
| BsgI | GTGCAG | 2 cut(s) | 2640, 2666 |
| Bsh1236I | CGCG | 3 cut(s) | 567, 695, 1404 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1704 |
| BshFI | GGCC | 4 cut(s) | 4149, 4191, 4294, 4308 |
| BshNI | GGYRCC | 2 cut(s) | 1296, 3319 |
| BshVI | ATCGAT | 1 cut(s) | 3538 |
| BsiEI | CGRYCG | 1 cut(s) | 1704 |
| BsiHKAI | GWGCWC | 2 cut(s) | 243, 465 |
| BsiHKCI | CYCGRG | 3 cut(s) | 2583, 4063, 4302 |
| BsiSI | CCGG | 5 cut(s) | 1379, 3317, 4064, 4131, 4192 |
| BsiWI | CGTACG | 1 cut(s) | 64 |
| BslFI | GGGAC | 7 cut(s) | 436, 1042, 2781, 3002, 3199, 3656, 3938 |
| BsmAI | GTCTC | 7 cut(s) | 2738, 2789, 2802, 2847, 3474, 4017, 4161 |
| BsmFI | GGGAC | 7 cut(s) | 436, 1042, 2781, 3002, 3199, 3656, 3938 |
| BsmI | GAATGC | 4 cut(s) | 1166, 2089, 3420, 3451 |
| BsnI | GGCC | 4 cut(s) | 4149, 4191, 4294, 4308 |
| Bso31I | GGTCTC | 1 cut(s) | 4017 |
| BsoBI | CYCGRG | 3 cut(s) | 2583, 4063, 4302 |
| Bsp1286I | GDGCHC | 3 cut(s) | 243, 465, 3409 |
| Bsp1407I | TGTACA | 1 cut(s) | 14 |
| Bsp19I | CCATGG | 2 cut(s) | 260, 3665 |
| Bsp68I | TCGCGA | 1 cut(s) | 567 |
| BspANI | GGCC | 4 cut(s) | 4149, 4191, 4294, 4308 |
| BspCNI | CTCAG | 7 cut(s) | 526, 594, 621, 1270, 1332, 1714, 2008 |
| BspDI | ATCGAT | 1 cut(s) | 3538 |
| BspFNI | CGCG | 3 cut(s) | 567, 695, 1404 |
| BspHI | TCATGA | 2 cut(s) | 940, 4327 |
| BspLI | GGNNCC | 6 cut(s) | 1030, 1298, 1440, 1824, 3321, 3882 |
| BspMAI | CTGCAG | 5 cut(s) | 1762, 2197, 2278, 2359, 3940 |
| BspMI | ACCTGC | 5 cut(s) | 2200, 2281, 2362, 2686, 3593 |
| BspPI | GGATC | 8 cut(s) | 397, 1421, 1433, 1446, 1506, 2595, 3604, 3748 |
| BspT107I | GGYRCC | 2 cut(s) | 1296, 3319 |
| BspTNI | GGTCTC | 1 cut(s) | 4017 |
| BsrBI | CCGCTC | 1 cut(s) | 3053 |
| BsrDI | GCAATG | 3 cut(s) | 1242, 2809, 3387 |
| BsrGI | TGTACA | 1 cut(s) | 14 |
| BssNI | GRCGYC | 1 cut(s) | 425 |
| BssT1I | CCWWGG | 7 cut(s) | 260, 2034, 3630, 3665, 3912, 3947, 3956 |
| Bst2UI | CCWGG | 7 cut(s) | 527, 1154, 1652, 1820, 3330, 3750, 3885 |
| Bst4CI | ACNGT | 7 cut(s) | 1170, 1213, 1863, 1976, 2013, 2563, 3369 |
| Bst6I | CTCTTC | 3 cut(s) | 191, 2109, 3297 |
| BstACI | GRCGYC | 1 cut(s) | 425 |
| BstAUI | TGTACA | 1 cut(s) | 14 |
| BstBAI | YACGTR | 1 cut(s) | 809 |
| BstC8I | GCNNGC | 6 cut(s) | 1272, 2150, 3418, 4012, 4254, 4310 |
| BstDSI | CCRYGG | 2 cut(s) | 260, 3665 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 680, 3333, 4302 |
| BstFNI | CGCG | 3 cut(s) | 567, 695, 1404 |
| BstHHI | GCGC | 2 cut(s) | 900, 1404 |
| BstMAI | GTCTC | 7 cut(s) | 2738, 2789, 2802, 2847, 3474, 4017, 4161 |
| BstMCI | CGRYCG | 1 cut(s) | 1704 |
| BstNI | CCWGG | 7 cut(s) | 527, 1154, 1652, 1820, 3330, 3750, 3885 |
| BstNSI | RCATGY | 4 cut(s) | 96, 3360, 3649, 3931 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2994 |
| BstSFI | CTRYAG | 6 cut(s) | 1758, 2193, 2274, 2355, 3773, 3936 |
| BstSLI | GKGCMC | 1 cut(s) | 3409 |
| BstUI | CGCG | 3 cut(s) | 567, 695, 1404 |
| BstV1I | GCAGC | 7 cut(s) | 183, 259, 262, 386, 869, 1286, 3151 |
| BstV2I | GAAGAC | 3 cut(s) | 1464, 2643, 2841 |
| BstX2I | RGATCY | 6 cut(s) | 389, 1131, 1438, 1511, 3184, 3609 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2240, 2321 |
| BstYI | RGATCY | 6 cut(s) | 389, 1131, 1438, 1511, 3184, 3609 |
| Bsu15I | ATCGAT | 1 cut(s) | 3538 |
| BsuI | GTATCC | 2 cut(s) | 195, 511 |
| BsuRI | GGCC | 4 cut(s) | 4149, 4191, 4294, 4308 |
| BsuTUI | ATCGAT | 1 cut(s) | 3538 |
| BtgI | CCRYGG | 2 cut(s) | 260, 3665 |
| BtgZI | GCGATG | 1 cut(s) | 1376 |
| BtrI | CACGTC | 2 cut(s) | 2771, 3410 |
| BtsI | GCAGTG | 1 cut(s) | 1767 |
| BtsIMutI | CAGTG | 7 cut(s) | 705, 1464, 1767, 1950, 2421, 3043, 3069 |
| BtuMI | TCGCGA | 1 cut(s) | 567 |
| BveI | ACCTGC | 5 cut(s) | 2200, 2281, 2362, 2686, 3593 |
| Cac8I | GCNNGC | 6 cut(s) | 1272, 2150, 3418, 4012, 4254, 4310 |
| CaiI | CAGNNNCTG | 6 cut(s) | 1369, 2201, 2282, 2363, 2845, 3749 |
| CciI | TCATGA | 2 cut(s) | 940, 4327 |
| CfoI | GCGC | 2 cut(s) | 900, 1404 |
| Cfr13I | GGNCC | 6 cut(s) | 364, 1029, 1822, 1844, 4055, 4181 |
| Cfr9I | CCCGGG | 1 cut(s) | 4063 |
| ClaI | ATCGAT | 1 cut(s) | 3538 |
| CseI | GACGC | 1 cut(s) | 684 |
| Eam1104I | CTCTTC | 3 cut(s) | 191, 2109, 3297 |
| EarI | CTCTTC | 3 cut(s) | 191, 2109, 3297 |
| Ecl136II | GAGCTC | 2 cut(s) | 241, 463 |
| Eco130I | CCWWGG | 7 cut(s) | 260, 2034, 3630, 3665, 3912, 3947, 3956 |
| Eco24I | GRGCYC | 2 cut(s) | 243, 465 |
| Eco31I | GGTCTC | 1 cut(s) | 4017 |
| Eco47I | GGWCC | 6 cut(s) | 364, 1029, 1822, 1844, 4055, 4181 |
| Eco53kI | GAGCTC | 2 cut(s) | 241, 463 |
| Eco57I | CTGAAG | 9 cut(s) | 456, 1065, 1476, 2190, 2271, 2352, 3216, 3321, 3513 |
| Eco88I | CYCGRG | 3 cut(s) | 2583, 4063, 4302 |
| EcoICRI | GAGCTC | 2 cut(s) | 241, 463 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 680, 3333, 4302 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1822 |
| EcoRI | GAATTC | 2 cut(s) | 1145, 3781 |
| EcoRII | CCWGG | 7 cut(s) | 525, 1152, 1650, 1818, 3328, 3748, 3883 |
| EcoT14I | CCWWGG | 7 cut(s) | 260, 2034, 3630, 3665, 3912, 3947, 3956 |
| EcoT22I | ATGCAT | 2 cut(s) | 853, 1960 |
| EcoT38I | GRGCYC | 2 cut(s) | 243, 465 |
| ErhI | CCWWGG | 7 cut(s) | 260, 2034, 3630, 3665, 3912, 3947, 3956 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 449, 481, 1525, 1557, 2674, 2706 |
| FaqI | GGGAC | 7 cut(s) | 436, 1042, 2781, 3002, 3199, 3656, 3938 |
| FauI | CCCGC | 2 cut(s) | 1834, 4305 |
| FauNDI | CATATG | 3 cut(s) | 483, 853, 2494 |
| FbaI | TGATCA | 5 cut(s) | 988, 1126, 1138, 1197, 3562 |
| FblI | GTMKAC | 1 cut(s) | 3932 |
| FriOI | GRGCYC | 2 cut(s) | 243, 465 |
| FspBI | CTAG | 9 cut(s) | 368, 405, 981, 3117, 3492, 3651, 3675, 3828, 3957 |
| GlaI | GCGC | 2 cut(s) | 899, 1403 |
| GsaI | CCCAGC | 3 cut(s) | 178, 2966, 4018 |
| GsuI | CTGGAG | 9 cut(s) | 560, 738, 1488, 1881, 2905, 2977, 3536, 3771, 3872 |
| HaeIII | GGCC | 4 cut(s) | 4149, 4191, 4294, 4308 |
| HapII | CCGG | 5 cut(s) | 1379, 3317, 4064, 4131, 4192 |
| HgaI | GACGC | 1 cut(s) | 684 |
| HhaI | GCGC | 2 cut(s) | 900, 1404 |
| Hin1I | GRCGYC | 1 cut(s) | 425 |
| Hin6I | GCGC | 2 cut(s) | 898, 1402 |
| HinP1I | GCGC | 2 cut(s) | 898, 1402 |
| HincII | GTYRAC | 2 cut(s) | 3589, 3871 |
| HindII | GTYRAC | 2 cut(s) | 3589, 3871 |
| HindIII | AAGCTT | 3 cut(s) | 656, 1082, 2146 |
| HpaI | GTTAAC | 1 cut(s) | 3871 |
| HpaII | CCGG | 5 cut(s) | 1379, 3317, 4064, 4131, 4192 |
| Hpy166II | GTNNAC | 9 cut(s) | 196, 2270, 2351, 2462, 3071, 3589, 3871, 3933, 4006 |
| Hpy8I | GTNNAC | 9 cut(s) | 196, 2270, 2351, 2462, 3071, 3589, 3871, 3933, 4006 |
| HpyCH4III | ACNGT | 7 cut(s) | 1170, 1213, 1863, 1976, 2013, 2563, 3369 |
| HpyCH4IV | ACGT | 7 cut(s) | 425, 808, 1327, 1387, 2770, 3045, 3409 |
| HpySE526I | ACGT | 7 cut(s) | 425, 808, 1327, 1387, 2770, 3045, 3409 |
| Hsp92I | GRCGYC | 1 cut(s) | 425 |
| HspAI | GCGC | 2 cut(s) | 898, 1402 |
| Ksp22I | TGATCA | 5 cut(s) | 988, 1126, 1138, 1197, 3562 |
| KspAI | GTTAAC | 1 cut(s) | 3871 |
| Lsp1109I | GCAGC | 7 cut(s) | 183, 259, 262, 386, 869, 1286, 3151 |
| MaeI | CTAG | 9 cut(s) | 368, 405, 981, 3117, 3492, 3651, 3675, 3828, 3957 |
| MaeII | ACGT | 7 cut(s) | 425, 808, 1327, 1387, 2770, 3045, 3409 |
| MaeIII | GTNAC | 6 cut(s) | 413, 638, 1170, 2929, 3385, 4364 |
| MbiI | CCGCTC | 1 cut(s) | 3053 |
| MfeI | CAATTG | 4 cut(s) | 960, 1122, 3566, 3875 |
| MflI | RGATCY | 6 cut(s) | 389, 1131, 1438, 1511, 3184, 3609 |
| MhlI | GDGCHC | 3 cut(s) | 243, 465, 3409 |
| MlyI | GAGTC | 8 cut(s) | 1367, 1703, 1931, 2420, 2534, 2984, 3182, 3221 |
| MmeI | TCCRAC | 2 cut(s) | 4028, 4064 |
| Mph1103I | ATGCAT | 2 cut(s) | 853, 1960 |
| MroXI | GAANNNNTTC | 3 cut(s) | 2919, 3708, 3990 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1302, 2238, 2319, 3761, 3812, 4332 |
| MspA1I | CMGCKG | 6 cut(s) | 174, 1277, 1700, 1829, 3076, 4312 |
| MspI | CCGG | 5 cut(s) | 1379, 3317, 4064, 4131, 4192 |
| MunI | CAATTG | 4 cut(s) | 960, 1122, 3566, 3875 |
| Mva1269I | GAATGC | 4 cut(s) | 1166, 2089, 3420, 3451 |
| MvaI | CCWGG | 7 cut(s) | 527, 1154, 1652, 1820, 3330, 3750, 3885 |
| MvnI | CGCG | 3 cut(s) | 567, 695, 1404 |
| NciI | CCSGG | 4 cut(s) | 3317, 4064, 4065, 4193 |
| NcoI | CCATGG | 2 cut(s) | 260, 3665 |
| NdeI | CATATG | 3 cut(s) | 483, 853, 2494 |
| NlaIV | GGNNCC | 6 cut(s) | 1030, 1298, 1440, 1824, 3321, 3882 |
| NmuCI | GTSAC | 3 cut(s) | 413, 638, 3385 |
| NruI | TCGCGA | 1 cut(s) | 567 |
| NsiI | ATGCAT | 2 cut(s) | 853, 1960 |
| NspI | RCATGY | 4 cut(s) | 96, 3360, 3649, 3931 |
| OliI | CACNNNNGTG | 3 cut(s) | 1302, 3761, 3812 |
| PaeR7I | CTCGAG | 1 cut(s) | 4302 |
| PagI | TCATGA | 2 cut(s) | 940, 4327 |
| PaqCI | CACCTGC | 5 cut(s) | 2200, 2281, 2362, 2686, 3593 |
| PciI | ACATGT | 3 cut(s) | 92, 3645, 3927 |
| PctI | GAATGC | 4 cut(s) | 1166, 2089, 3420, 3451 |
| PdmI | GAANNNNTTC | 3 cut(s) | 2919, 3708, 3990 |
| Pfl23II | CGTACG | 1 cut(s) | 64 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2804 |
| PleI | GAGTC | 8 cut(s) | 1367, 1702, 1931, 2419, 2534, 2984, 3181, 3220 |
| PpsI | GAGTC | 8 cut(s) | 1367, 1702, 1931, 2419, 2534, 2984, 3181, 3220 |
| Ppu21I | YACGTR | 1 cut(s) | 809 |
| PpuMI | RGGWCCY | 1 cut(s) | 1822 |
| PscI | ACATGT | 3 cut(s) | 92, 3645, 3927 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2994 |
| PshBI | ATTAAT | 1 cut(s) | 879 |
| PsiI | TTATAA | 1 cut(s) | 680 |
| Psp124BI | GAGCTC | 2 cut(s) | 243, 465 |
| Psp5II | RGGWCCY | 1 cut(s) | 1822 |
| Psp6I | CCWGG | 7 cut(s) | 525, 1152, 1650, 1818, 3328, 3748, 3883 |
| PspFI | CCCAGC | 3 cut(s) | 174, 2962, 4014 |
| PspGI | CCWGG | 7 cut(s) | 525, 1152, 1650, 1818, 3328, 3748, 3883 |
| PspLI | CGTACG | 1 cut(s) | 64 |
| PspN4I | GGNNCC | 6 cut(s) | 1030, 1298, 1440, 1824, 3321, 3882 |
| PspPI | GGNCC | 6 cut(s) | 364, 1029, 1822, 1844, 4055, 4181 |
| PspPPI | RGGWCCY | 1 cut(s) | 1822 |
| PspXI | VCTCGAGB | 1 cut(s) | 4302 |
| PstI | CTGCAG | 5 cut(s) | 1762, 2197, 2278, 2359, 3940 |
| PstNI | CAGNNNCTG | 6 cut(s) | 1369, 2201, 2282, 2363, 2845, 3749 |
| PsuI | RGATCY | 6 cut(s) | 389, 1131, 1438, 1511, 3184, 3609 |
| PvuII | CAGCTG | 3 cut(s) | 174, 1277, 3076 |
| RruI | TCGCGA | 1 cut(s) | 567 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1302, 2238, 2319, 3761, 3812, 4332 |
| SacI | GAGCTC | 2 cut(s) | 243, 465 |
| Sau96I | GGNCC | 6 cut(s) | 364, 1029, 1822, 1844, 4055, 4181 |
| ScaI | AGTACT | 1 cut(s) | 1973 |
| SchI | GAGTC | 8 cut(s) | 1367, 1703, 1931, 2420, 2534, 2984, 3182, 3221 |
| SduI | GDGCHC | 3 cut(s) | 243, 465, 3409 |
| SfcI | CTRYAG | 6 cut(s) | 1758, 2193, 2274, 2355, 3773, 3936 |
| Sfr274I | CTCGAG | 1 cut(s) | 4302 |
| SinI | GGWCC | 6 cut(s) | 364, 1029, 1822, 1844, 4055, 4181 |
| SlaI | CTCGAG | 1 cut(s) | 4302 |
| SmaI | CCCGGG | 1 cut(s) | 4065 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1302, 2238, 2319, 3761, 3812, 4332 |
| SmlI | CTYRAG | 3 cut(s) | 147, 908, 4302 |
| SmoI | CTYRAG | 3 cut(s) | 147, 908, 4302 |
| SspI | AATATT | 1 cut(s) | 877 |
| SspMI | CTAG | 9 cut(s) | 368, 405, 981, 3117, 3492, 3651, 3675, 3828, 3957 |
| SstI | GAGCTC | 2 cut(s) | 243, 465 |
| StyI | CCWWGG | 7 cut(s) | 260, 2034, 3630, 3665, 3912, 3947, 3956 |
| TaaI | ACNGT | 7 cut(s) | 1170, 1213, 1863, 1976, 2013, 2563, 3369 |
| TaiI | ACGT | 7 cut(s) | 428, 811, 1330, 1390, 2773, 3048, 3412 |
| TaqI | TCGA | 8 cut(s) | 455, 1066, 1704, 1906, 3242, 3353, 3538, 4303 |
| TaqII | GACCGA | 1 cut(s) | 4041 |
| TatI | WGTACW | 8 cut(s) | 14, 195, 543, 1971, 2267, 2348, 3653, 4034 |
| TauI | GCSGC | 4 cut(s) | 146, 898, 3053, 4297 |
| TscAI | CASTG | 7 cut(s) | 705, 1471, 1767, 1957, 2421, 3043, 3069 |
| TseFI | GTSAC | 3 cut(s) | 413, 638, 3385 |
| TseI | GCWGC | 7 cut(s) | 171, 272, 275, 374, 857, 1274, 3164 |
| Tsp45I | GTSAC | 3 cut(s) | 413, 638, 3385 |
| TspGWI | ACGGA | 6 cut(s) | 432, 493, 1504, 2632, 3492, 4176 |
| TspMI | CCCGGG | 1 cut(s) | 4063 |
| TspRI | CASTG | 7 cut(s) | 705, 1471, 1767, 1957, 2421, 3043, 3069 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2804 |
| VpaK11BI | GGWCC | 6 cut(s) | 364, 1029, 1822, 1844, 4055, 4181 |
| VspI | ATTAAT | 1 cut(s) | 879 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 680, 3333, 4302 |
| XapI | RAATTY | 9 cut(s) | 379, 935, 975, 1145, 1407, 1738, 3129, 3263, 3781 |
| XceI | RCATGY | 4 cut(s) | 96, 3360, 3649, 3931 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1826 |
| XhoI | CTCGAG | 1 cut(s) | 4302 |
| XmaI | CCCGGG | 1 cut(s) | 4063 |
| XmaJI | CCTAGG | 1 cut(s) | 3956 |
| XmiI | GTMKAC | 1 cut(s) | 3932 |
| XmnI | GAANNNNTTC | 3 cut(s) | 2919, 3708, 3990 |
| XspI | CTAG | 9 cut(s) | 368, 405, 981, 3117, 3492, 3651, 3675, 3828, 3957 |
| ZraI | GACGTC | 1 cut(s) | 426 |
| ZrmI | AGTACT | 1 cut(s) | 1973 |
| Zsp2I | ATGCAT | 2 cut(s) | 853, 1960 |