RchiOBHm_Chr2g0099921

zinc finger CCCH domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
11944803 .. 11948405
3603 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ47461

Sequence Viewer

Length: 1854 bp
ATGGACCTTCAGCAAATTCAGGTCTACAAGCCGGCTATCGGCGAGCACGCGGAGCGGCAGCCACGGGCGGCGGCGGACGGCGCGGCGGAGCTGAGGAGCGTCGATCAATGCGAATCCATCCGGCACCTCGACGATTCTCAGCTCCTCGTCGGAGCTTCGGAGGCGGTTGCGCGTAAGGAGGTTCATATGGCTGACGTGGCGGTGGTCAAAGAGGGGAAGAGTAGCGTAGTGGGGAGAAAGAGGCGGGGTCGGCCGCCGGGTGGGCAGGGGAGACCCAAAACGACGCCGTTGAGGAAGAAGAACGATGAGGAGGATGTTTGCTTTATTTGCTTCGATGGTGGGAGCTTAGTGCTTTGTGATCGGAGGGGATGTCCTAAGGCGTACCACCCCTCCTGCATCAAGCGGGACGAGGCCTTTTTCAAATCAAAGGCCAAATGGAATTGCGGTTGGCATATATGTAGCAGCTGCCAGAAGGCCTCCCATTATATGTGCTATACTTGTACATATTCATTGTGCAAGGGATGTATTAAAGATGCTGATTACCAATGCGTACGAGGAAACAAAGGATTTTGTGGAACATGTATGCGAACTATAATGCTAATTGAAAATGTGCAAGGGAATAAGGAAGCGGCTCAAGTGGATTTTGATGACAAAAGCAGCTGGGAGTATCTCTTCAAGGTGTACTGGATACTTCTGAAAGGGCAACTATCATTAACTCTGGATGAGCTCATTAAAGCTAAAAATCCATGGAAAGGAGCTGCTGCTGTTGTGGCTTGTAAGGGAGGAGCTTCGGGTGAAGTTCATATTGGTCATAAAACAAATGATTCAGGTTCTCTCAACTCTTGTCTGGACCTAGAAGCAGCAAATTCCTGTGGATCTCATAAAAAGCCTAGAATTGGTGACGGAGGGACGTCTTTAGCTGAAGGCACAAATTGGGCATCGAAGGAGCTCTTGGAGTTTGTTGCTCATATGAAAAATGGTGATGTATCCGTGTTATCTCAGTTTGATGTCCAGGCACTTTTGCTGGAGTACATAAAGAAAAATAATCTTCGCGACCCTCACCGAAAATGCCAAATTATTTGTGATCTGAGGCTCAGAAATCTGTTTGGGAAAGAATGTGTTGGTCACTTTGAAATGTTGAAGCTTCTTGAATATCACTACCTTATAAAGGAAAGTTCCGCGTCAGTGAAAAGTATTGGTGCTGGAGTTGTTAATGGTGTTGCTACCGAGATGGAGATTGATGGGAATTATGACAATCAAATGATGATGTGTAGTGATAAGAAGCGTAAAACACGTAAAAGGACTGATGAGAGAGTACCACCTACTAACCCAGATGCATATGCAGCTATTGATGTTCATAATATTAATTTGATCTACTTGCGGCGCAATTTGCTTGAGAATCTACTTGACGATGTTGATAAATTTCATGAAAGGGTTGTTGGTTCAATTGTGCGAATAAGAATTTCTAGTAGTGATCAAAAGCATGATACATATAGGCTTGTGCAAGTTATAGGGACCAACAAGGTTGCTGAAGGCTATAAAATTGGCACTCGAACAACTGATATGAAGCTTGAAATCTCAAACTTAGACAAGAAAGAGGTCTTACCAATTGATCAGATCTCTGATCAGGAATTCTCCCAGGATGAATGCAAACGGTTACATCAGAGTATAATATGTGGGCTGATCAAACGATTTACTGTGGGTGAGATTCAGGATAAAGCAATGGCACTTAGAGCATTTAGAGTAAATGATGAGCTGGCAGCTGAGGTTTTACGGCTTAGGCACCTTCGTGATCGTGCAAGTGAAAAAGGACGTAGAAAGGAATATCCTTTTTCTCCAGTGTCTTGCTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

617

Amino Acids

69.27

Weight (kDa)

8.7

Isoelectric Point (pI)

39.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SWIB PF02201 314 - 386 2.7e-14 SWIB/MDM2 domain
Plus-3 PF03126 454 - 557 2.7e-23 Plus-3 domain
NERD_plant PF25980 580 - 610 2.4e-12 Plant NERD domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1166
AatII GACGTC 1 cut(s) 914
AccB1I GGYRCC 2 cut(s) 123, 1782
AccBSI CCGCTC 1 cut(s) 55
AccI GTMKAC 1 cut(s) 24
AccII CGCG 5 cut(s) 50, 83, 172, 1053, 1181
AclWI GGATC 1 cut(s) 883
AcoI YGGCCR 1 cut(s) 251
AcsI RAATTY 5 cut(s) 15, 865, 1421, 1461, 1631
AcuI CTGAAG 2 cut(s) 942, 1551
AcyI GRCGYC 2 cut(s) 284, 911
AfaI GTAC 6 cut(s) 383, 502, 552, 683, 1031, 1317
AfiI CCNNNNNNNGG 5 cut(s) 38, 260, 752, 896, 1168
AflIII ACRYGT 2 cut(s) 578, 1292
AgsI TTSAA 8 cut(s) 421, 605, 676, 1133, 1141, 1151, 1446, 1574
AjiI CACGTC 1 cut(s) 196
AjnI CCWGG 2 cut(s) 1011, 1638
AjuI GAANNNNNNNTTGG 6 cut(s) 789, 821, 935, 967, 1422, 1454
AleI CACNNNNGTG 1 cut(s) 1788
Alw21I GWGCWC 3 cut(s) 48, 729, 951
Alw26I GTCTC 1 cut(s) 265
AlwI GGATC 1 cut(s) 883
AoxI GGCC 4 cut(s) 251, 411, 429, 474
ApeKI GCWGC 9 cut(s) 58, 462, 465, 657, 758, 761, 860, 1343, 1760
ApoI RAATTY 5 cut(s) 15, 865, 1421, 1461, 1631
AseI ATTAAT 1 cut(s) 1365
AspLEI GCGC 3 cut(s) 83, 172, 1386
AspS9I GGNCC 3 cut(s) 4, 850, 1515
AsuC2I CCSGG 1 cut(s) 258
AsuHPI GGTGA 5 cut(s) 806, 911, 992, 1052, 1715
AvaII GGWCC 3 cut(s) 4, 850, 1515
AxyI CCTNAGG 1 cut(s) 375
BanI GGYRCC 2 cut(s) 123, 1782
BanII GRGCYC 2 cut(s) 729, 951
Bbv12I GWGCWC 3 cut(s) 48, 729, 951
BbvCI CCTCAGC 2 cut(s) 92, 1764
BbvI GCAGC 9 cut(s) 70, 452, 474, 669, 745, 748, 872, 1355, 1772
BccI CCATC 4 cut(s) 125, 329, 1225, 1235
BceAI ACGGC 3 cut(s) 94, 271, 1790
BciT130I CCWGG 2 cut(s) 1013, 1640
BciVI GTATCC 2 cut(s) 681, 997
BclI TGATCA 4 cut(s) 1474, 1612, 1624, 1683
BcnI CCSGG 1 cut(s) 258
BcoDI GTCTC 1 cut(s) 265
BfaI CTAG 3 cut(s) 854, 891, 1467
BfuI GTATCC 2 cut(s) 681, 997
BglI GCCNNNNNGGC 1 cut(s) 262
BglII AGATCT 1 cut(s) 1617
Bme1390I CCNGG 3 cut(s) 258, 1013, 1640
Bme18I GGWCC 3 cut(s) 4, 850, 1515
BmgBI CACGTC 1 cut(s) 196
BmgT120I GGNCC 3 cut(s) 4, 850, 1515
BmiI GGNNCC 3 cut(s) 125, 1516, 1784
BmrFI CCNGG 3 cut(s) 258, 1013, 1640
BmsI GCATC 4 cut(s) 405, 523, 947, 1324
BpmI CTGGAG 3 cut(s) 1046, 1224, 1821
Bpu10I CCTNAGC 3 cut(s) 92, 1764, 1778
BpuEI CTTGAG 2 cut(s) 618, 1415
BpuMI CCSGG 1 cut(s) 258
BsaAI YACGTR 1 cut(s) 1295
BsaHI GRCGYC 2 cut(s) 284, 911
BsaI GGTCTC 1 cut(s) 265
BsaJI CCNNGG 3 cut(s) 62, 746, 1638
BsaXI ACNNNNNCTCC 4 cut(s) 355, 374, 385, 404
Bsc4I CCNNNNNNNGG 5 cut(s) 38, 260, 752, 896, 1168
Bse118I RCCGGY 1 cut(s) 31
Bse1I ACTGG 2 cut(s) 689, 1838
Bse21I CCTNAGG 1 cut(s) 375
Bse3DI GCAATG 1 cut(s) 1728
BseBI CCWGG 2 cut(s) 1013, 1640
BseDI CCNNGG 3 cut(s) 62, 746, 1638
BseGI GGATG 6 cut(s) 117, 319, 374, 527, 727, 1648
BseLI CCNNNNNNNGG 5 cut(s) 38, 260, 752, 896, 1168
BseMI GCAATG 1 cut(s) 1728
BseMII CTCAG 6 cut(s) 83, 152, 1013, 1079, 1108, 1755
BseNI ACTGG 2 cut(s) 689, 1838
BseRI GAGGAG 4 cut(s) 109, 134, 323, 798
BseX3I CGGCCG 1 cut(s) 251
BseXI GCAGC 9 cut(s) 70, 452, 474, 669, 745, 748, 872, 1355, 1772
BseYI CCCAGC 1 cut(s) 660
Bsh1236I CGCG 5 cut(s) 50, 83, 172, 1053, 1181
Bsh1285I CGRYCG 1 cut(s) 254
BshFI GGCC 4 cut(s) 253, 413, 431, 476
BshNI GGYRCC 2 cut(s) 123, 1782
BsiEI CGRYCG 1 cut(s) 254
BsiHKAI GWGCWC 3 cut(s) 48, 729, 951
BsiSI CCGG 3 cut(s) 32, 121, 257
BsiWI CGTACG 1 cut(s) 550
BslFI GGGAC 3 cut(s) 419, 922, 1528
BslI CCNNNNNNNGG 5 cut(s) 38, 260, 752, 896, 1168
BsmAI GTCTC 1 cut(s) 265
BsmFI GGGAC 3 cut(s) 419, 922, 1528
BsmI GAATGC 1 cut(s) 1652
BsnI GGCC 4 cut(s) 253, 413, 431, 476
Bso31I GGTCTC 1 cut(s) 265
Bsp1286I GDGCHC 3 cut(s) 48, 729, 951
Bsp1407I TGTACA 1 cut(s) 500
Bsp19I CCATGG 1 cut(s) 746
Bsp68I TCGCGA 1 cut(s) 1053
BspANI GGCC 4 cut(s) 253, 413, 431, 476
BspCNI CTCAG 6 cut(s) 84, 151, 1012, 1080, 1107, 1756
BspFNI CGCG 5 cut(s) 50, 83, 172, 1053, 1181
BspHI TCATGA 1 cut(s) 1426
BspLI GGNNCC 3 cut(s) 125, 1516, 1784
BspPI GGATC 1 cut(s) 883
BspT107I GGYRCC 2 cut(s) 123, 1782
BspTNI GGTCTC 1 cut(s) 265
BsrBI CCGCTC 1 cut(s) 55
BsrDI GCAATG 1 cut(s) 1728
BsrFI RCCGGY 1 cut(s) 31
BsrGI TGTACA 1 cut(s) 500
BsrI ACTGG 2 cut(s) 689, 1838
BssAI RCCGGY 1 cut(s) 31
BssECI CCNNGG 3 cut(s) 62, 746, 1638
BssNI GRCGYC 2 cut(s) 284, 911
BssT1I CCWWGG 1 cut(s) 746
Bst2UI CCWGG 2 cut(s) 1013, 1640
Bst4CI ACNGT 2 cut(s) 1656, 1699
Bst6I CTCTTC 2 cut(s) 212, 677
BstACI GRCGYC 2 cut(s) 284, 911
BstAUI TGTACA 1 cut(s) 500
BstBAI YACGTR 1 cut(s) 1295
BstC8I GCNNGC 4 cut(s) 33, 44, 48, 1758
BstDSI CCRYGG 2 cut(s) 62, 746
BstENI CCTNNNNNAGG 1 cut(s) 1166
BstF5I GGATG 6 cut(s) 117, 319, 374, 527, 727, 1648
BstFNI CGCG 5 cut(s) 50, 83, 172, 1053, 1181
BstHHI GCGC 3 cut(s) 83, 172, 1386
BstMAI GTCTC 1 cut(s) 265
BstMCI CGRYCG 1 cut(s) 254
BstNI CCWGG 2 cut(s) 1013, 1640
BstNSI RCATGY 1 cut(s) 582
BstSCI CCNGG 3 cut(s) 256, 1011, 1638
BstUI CGCG 5 cut(s) 50, 83, 172, 1053, 1181
BstV1I GCAGC 9 cut(s) 70, 452, 474, 669, 745, 748, 872, 1355, 1772
BstX2I RGATCY 2 cut(s) 875, 1617
BstYI RGATCY 2 cut(s) 875, 1617
BstZI CGGCCG 1 cut(s) 251
Bsu36I CCTNAGG 1 cut(s) 375
BsuI GTATCC 2 cut(s) 681, 997
BsuRI GGCC 4 cut(s) 253, 413, 431, 476
BtgI CCRYGG 2 cut(s) 62, 746
BtrI CACGTC 1 cut(s) 196
BtsCI GGATG 6 cut(s) 117, 319, 374, 527, 727, 1648
BtsIMutI CAGTG 2 cut(s) 1191, 1845
BtuMI TCGCGA 1 cut(s) 1053
Cac8I GCNNGC 4 cut(s) 33, 44, 48, 1758
CciI TCATGA 1 cut(s) 1426
CfoI GCGC 3 cut(s) 83, 172, 1386
Cfr10I RCCGGY 1 cut(s) 31
Cfr13I GGNCC 3 cut(s) 4, 850, 1515
CseI GACGC 3 cut(s) 88, 292, 1170
Csp6I GTAC 6 cut(s) 382, 501, 551, 682, 1030, 1316
CviAII CATG 4 cut(s) 579, 747, 1427, 1484
CviQI GTAC 6 cut(s) 382, 501, 551, 682, 1030, 1316
EaeI YGGCCR 1 cut(s) 251
EagI CGGCCG 1 cut(s) 251
Eam1104I CTCTTC 2 cut(s) 212, 677
EarI CTCTTC 2 cut(s) 212, 677
EciI GGCGGA 2 cut(s) 89, 101
Ecl136II GAGCTC 2 cut(s) 727, 949
EclXI CGGCCG 1 cut(s) 251
Eco130I CCWWGG 1 cut(s) 746
Eco147I AGGCCT 2 cut(s) 413, 476
Eco24I GRGCYC 2 cut(s) 729, 951
Eco31I GGTCTC 1 cut(s) 265
Eco47I GGWCC 3 cut(s) 4, 850, 1515
Eco52I CGGCCG 1 cut(s) 251
Eco53kI GAGCTC 2 cut(s) 727, 949
Eco57I CTGAAG 2 cut(s) 942, 1551
Eco81I CCTNAGG 1 cut(s) 375
EcoICRI GAGCTC 2 cut(s) 727, 949
EcoNI CCTNNNNNAGG 1 cut(s) 1166
EcoRI GAATTC 1 cut(s) 1631
EcoRII CCWGG 2 cut(s) 1011, 1638
EcoT14I CCWWGG 1 cut(s) 746
EcoT22I ATGCAT 1 cut(s) 1339
EcoT38I GRGCYC 2 cut(s) 729, 951
ErhI CCWWGG 1 cut(s) 746
FaeI CATG 4 cut(s) 582, 750, 1430, 1487
FalI AAGNNNNNCTT 2 cut(s) 935, 967
FaqI GGGAC 3 cut(s) 419, 922, 1528
FatI CATG 4 cut(s) 578, 746, 1426, 1483
FauI CCCGC 2 cut(s) 237, 396
FauNDI CATATG 3 cut(s) 186, 969, 1339
FbaI TGATCA 4 cut(s) 1474, 1612, 1624, 1683
FblI GTMKAC 1 cut(s) 24
FokI GGATG 6 cut(s) 104, 326, 381, 534, 734, 1655
FriOI GRGCYC 2 cut(s) 729, 951
FspBI CTAG 3 cut(s) 854, 891, 1467
GlaI GCGC 3 cut(s) 82, 171, 1385
GsaI CCCAGC 1 cut(s) 664
GsuI CTGGAG 3 cut(s) 1046, 1224, 1821
HaeIII GGCC 4 cut(s) 253, 413, 431, 476
HapII CCGG 3 cut(s) 32, 121, 257
HgaI GACGC 3 cut(s) 88, 292, 1170
HhaI GCGC 3 cut(s) 83, 172, 1386
Hin1I GRCGYC 2 cut(s) 284, 911
Hin1II CATG 4 cut(s) 582, 750, 1430, 1487
Hin6I GCGC 3 cut(s) 81, 170, 1384
HinP1I GCGC 3 cut(s) 81, 170, 1384
HindIII AAGCTT 2 cut(s) 1142, 1568
HinfI GANTC 5 cut(s) 113, 134, 824, 1399, 1708
HpaII CCGG 3 cut(s) 32, 121, 257
HphI GGTGA 5 cut(s) 806, 911, 992, 1052, 1715
Hpy166II GTNNAC 2 cut(s) 25, 682
Hpy188I TCNGA 9 cut(s) 152, 160, 363, 696, 1089, 1097, 1617, 1624, 1665
Hpy188III TCNNGA 8 cut(s) 719, 848, 1052, 1148, 1427, 1628, 1712, 1790
Hpy8I GTNNAC 2 cut(s) 25, 682
Hpy99I CGWCG 4 cut(s) 104, 134, 152, 286
HpyAV CCTTC 6 cut(s) 17, 466, 917, 937, 1526, 1796
HpyCH4III ACNGT 2 cut(s) 1656, 1699
HpyCH4IV ACGT 4 cut(s) 195, 911, 1294, 1813
HpyCH4V TGCA 8 cut(s) 396, 516, 613, 1337, 1343, 1504, 1650, 1799
HpySE526I ACGT 4 cut(s) 195, 911, 1294, 1813
Hsp92I GRCGYC 2 cut(s) 284, 911
Hsp92II CATG 4 cut(s) 582, 750, 1430, 1487
HspAI GCGC 3 cut(s) 81, 170, 1384
KroI GCCGGC 1 cut(s) 31
KroNI GCCGGC 1 cut(s) 33
Ksp22I TGATCA 4 cut(s) 1474, 1612, 1624, 1683
LmnI GCTCC 9 cut(s) 52, 88, 96, 147, 152, 342, 755, 785, 946
Lsp1109I GCAGC 9 cut(s) 70, 452, 474, 669, 745, 748, 872, 1355, 1772
LweI GCATC 4 cut(s) 405, 523, 947, 1324
MaeI CTAG 3 cut(s) 854, 891, 1467
MaeII ACGT 4 cut(s) 195, 911, 1294, 1813
MaeIII GTNAC 3 cut(s) 899, 1124, 1656
MbiI CCGCTC 1 cut(s) 55
MboII GAAGA 5 cut(s) 229, 307, 310, 664, 1040
MfeI CAATTG 2 cut(s) 1446, 1608
MflI RGATCY 2 cut(s) 875, 1617
MhlI GDGCHC 3 cut(s) 48, 729, 951
MmeI TCCRAC 1 cut(s) 130
Mph1103I ATGCAT 1 cut(s) 1339
MroNI GCCGGC 1 cut(s) 31
MseI TTAA 5 cut(s) 528, 713, 732, 1212, 1365
MslI CAYNNNNRTG 1 cut(s) 1788
MspA1I CMGCKG 3 cut(s) 465, 660, 1763
MspI CCGG 3 cut(s) 32, 121, 257
MspR9I CCNGG 3 cut(s) 258, 1013, 1640
MunI CAATTG 2 cut(s) 1446, 1608
Mva1269I GAATGC 1 cut(s) 1652
MvaI CCWGG 2 cut(s) 1013, 1640
MvnI CGCG 5 cut(s) 50, 83, 172, 1053, 1181
NaeI GCCGGC 1 cut(s) 33
NciI CCSGG 1 cut(s) 258
NcoI CCATGG 1 cut(s) 746
NdeI CATATG 3 cut(s) 186, 969, 1339
NgoMIV GCCGGC 1 cut(s) 31
NlaIII CATG 4 cut(s) 582, 750, 1430, 1487
NlaIV GGNNCC 3 cut(s) 125, 1516, 1784
NmuCI GTSAC 2 cut(s) 899, 1124
NruI TCGCGA 1 cut(s) 1053
NsiI ATGCAT 1 cut(s) 1339
NspI RCATGY 1 cut(s) 582
OliI CACNNNNGTG 1 cut(s) 1788
PagI TCATGA 1 cut(s) 1426
PceI AGGCCT 2 cut(s) 413, 476
PciI ACATGT 1 cut(s) 578
PcsI WCGNNNNNNNCGW 1 cut(s) 108
PctI GAATGC 1 cut(s) 1652
PdiI GCCGGC 1 cut(s) 33
PfeI GAWTC 5 cut(s) 113, 134, 824, 1399, 1708
Pfl23II CGTACG 1 cut(s) 550
Ppu21I YACGTR 1 cut(s) 1295
PscI ACATGT 1 cut(s) 578
PshBI ATTAAT 1 cut(s) 1365
PsiI TTATAA 1 cut(s) 1166
Psp124BI GAGCTC 2 cut(s) 729, 951
Psp6I CCWGG 2 cut(s) 1011, 1638
PspFI CCCAGC 1 cut(s) 660
PspGI CCWGG 2 cut(s) 1011, 1638
PspLI CGTACG 1 cut(s) 550
PspN4I GGNNCC 3 cut(s) 125, 1516, 1784
PspPI GGNCC 3 cut(s) 4, 850, 1515
PsuI RGATCY 2 cut(s) 875, 1617
PvuII CAGCTG 3 cut(s) 465, 660, 1763
RruI TCGCGA 1 cut(s) 1053
RsaI GTAC 6 cut(s) 383, 502, 552, 683, 1031, 1317
RsaNI GTAC 6 cut(s) 382, 501, 551, 682, 1030, 1316
RseI CAYNNNNRTG 1 cut(s) 1788
SacI GAGCTC 2 cut(s) 729, 951
SaqAI TTAA 5 cut(s) 528, 713, 732, 1212, 1365
Sau96I GGNCC 3 cut(s) 4, 850, 1515
ScrFI CCNGG 3 cut(s) 258, 1013, 1640
SduI GDGCHC 3 cut(s) 48, 729, 951
SfaNI GCATC 4 cut(s) 405, 523, 947, 1324
SinI GGWCC 3 cut(s) 4, 850, 1515
SmiMI CAYNNNNRTG 1 cut(s) 1788
SmlI CTYRAG 2 cut(s) 633, 1394
SmoI CTYRAG 2 cut(s) 633, 1394
SseBI AGGCCT 2 cut(s) 413, 476
SspI AATATT 1 cut(s) 1363
SspMI CTAG 3 cut(s) 854, 891, 1467
SstI GAGCTC 2 cut(s) 729, 951
StuI AGGCCT 2 cut(s) 413, 476
StyD4I CCNGG 3 cut(s) 256, 1011, 1638
StyI CCWWGG 1 cut(s) 746
TaaI ACNGT 2 cut(s) 1656, 1699
TaiI ACGT 4 cut(s) 198, 914, 1297, 1816
TaqI TCGA 5 cut(s) 102, 129, 333, 941, 1552
TatI WGTACW 3 cut(s) 500, 681, 1029
TauI GCSGC 7 cut(s) 58, 71, 74, 86, 256, 632, 1384
TfiI GAWTC 5 cut(s) 113, 134, 824, 1399, 1708
Tru1I TTAA 5 cut(s) 528, 713, 732, 1212, 1365
Tru9I TTAA 5 cut(s) 528, 713, 732, 1212, 1365
TscAI CASTG 2 cut(s) 1191, 1845
TseFI GTSAC 2 cut(s) 899, 1124
TseI GCWGC 9 cut(s) 58, 462, 465, 657, 758, 761, 860, 1343, 1760
Tsp45I GTSAC 2 cut(s) 899, 1124
TspDTI ATGAA 9 cut(s) 173, 498, 791, 986, 1346, 1415, 1443, 1580, 1659
TspGWI ACGGA 2 cut(s) 918, 979
TspRI CASTG 2 cut(s) 1191, 1845
VpaK11BI GGWCC 3 cut(s) 4, 850, 1515
VspI ATTAAT 1 cut(s) 1365
XagI CCTNNNNNAGG 1 cut(s) 1166
XapI RAATTY 5 cut(s) 15, 865, 1421, 1461, 1631
XceI RCATGY 1 cut(s) 582
XmiI GTMKAC 1 cut(s) 24
XspI CTAG 3 cut(s) 854, 891, 1467
ZraI GACGTC 1 cut(s) 912
Zsp2I ATGCAT 1 cut(s) 1339
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.