MD02G1147500.v1.1

Protein N-lysine methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0012035
Physical Location & Seq
Forward (+)
12170865 .. 12171070
206 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1147500.v1.1.491

Sequence Viewer

Length: 186 bp
ATGAGGCGGTGGAAGAAGGACTCGGCTTTCTTCAAGAAAGCCAGGAAGCTTTTCGAGGTGGAGGTCTTGCACGTGGACCCCCCGTGCCTTGGCTCCCGGGTTGGAGTTGCCGTTTACCGTTTAACCGCCAAAAAGTCGAGTAGGAAAATGTTGAATTCTGTTGACAATGCTAATGTTATCGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_16

Protein Analysis

62

Amino Acids

6.96

Weight (kDa)

10.5

Isoelectric Point (pI)

36.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50850 AT5G49560
fragaria_vesca FvH4_1g13310
malus_domestica MD02G1147500.v1.1 MD15G1261800.v1.1
prunus_persica Prupe.7G154600_v2.0.a1
pyrus_communis pycom15g22900
rosa_chinensis RchiOBHm_Chr2g0101571
rosa_laevigata RLG00000017091
rosa_multiflora Rmu_co8339275.1_g000001 Rmu_sc0006153.1_g000007 Rmu_sc0019613.1_g000002
rosa_roxburghii Rroxscaffold_2G00141180
rosa_rugosa Rorug02G0097300
rosa_samantha Rh2AG148100 Rh2BG153500 Rh2CG154000 Rh2DG153800
rosa_wichuraiana Rw2G011550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 7, 126
AcsI RAATTY 1 cut(s) 154
AcvI CACGTG 1 cut(s) 73
AfiI CCNNNNNNNGG 1 cut(s) 89
AgsI TTSAA 2 cut(s) 34, 154
AjnI CCWGG 1 cut(s) 41
AluBI AGCT 1 cut(s) 49
AluI AGCT 1 cut(s) 49
Ama87I CYCGRG 1 cut(s) 96
ApoI RAATTY 1 cut(s) 154
Asp700I GAANNNNTTC 1 cut(s) 50
AspS9I GGNCC 1 cut(s) 76
AsuC2I CCSGG 2 cut(s) 97, 98
AvaI CYCGRG 1 cut(s) 96
AvaII GGWCC 1 cut(s) 76
BbrPI CACGTG 1 cut(s) 73
BceAI ACGGC 1 cut(s) 95
BciT130I CCWGG 1 cut(s) 43
BcnI CCSGG 2 cut(s) 97, 98
Bme1390I CCNGG 3 cut(s) 43, 97, 98
Bme18I GGWCC 1 cut(s) 76
BmeT110I CYCGRG 1 cut(s) 96
BmgT120I GGNCC 1 cut(s) 76
BmiI GGNNCC 2 cut(s) 78, 94
BmrFI CCNGG 3 cut(s) 43, 97, 98
BpuMI CCSGG 2 cut(s) 97, 98
BsaAI YACGTR 1 cut(s) 73
BsaJI CCNNGG 2 cut(s) 88, 96
BsaXI ACNNNNNCTCC 2 cut(s) 96, 126
Bsc4I CCNNNNNNNGG 1 cut(s) 89
BseBI CCWGG 1 cut(s) 43
BseDI CCNNGG 2 cut(s) 88, 96
BseLI CCNNNNNNNGG 1 cut(s) 89
BsiHKCI CYCGRG 1 cut(s) 96
BsiSI CCGG 1 cut(s) 97
BslI CCNNNNNNNGG 1 cut(s) 89
BsoBI CYCGRG 1 cut(s) 96
BspACI CCGC 2 cut(s) 7, 126
BspLI GGNNCC 2 cut(s) 78, 94
BssECI CCNNGG 2 cut(s) 88, 96
BssT1I CCWWGG 1 cut(s) 88
Bst2UI CCWGG 1 cut(s) 43
Bst4CI ACNGT 1 cut(s) 119
BstBAI YACGTR 1 cut(s) 73
BstNI CCWGG 1 cut(s) 43
BstSCI CCNGG 3 cut(s) 41, 95, 96
Cfr13I GGNCC 1 cut(s) 76
Cfr9I CCCGGG 1 cut(s) 96
CviJI RGCY 4 cut(s) 26, 41, 49, 93
CviKI_1 RGCY 4 cut(s) 26, 41, 49, 93
Eco130I CCWWGG 1 cut(s) 88
Eco47I GGWCC 1 cut(s) 76
Eco72I CACGTG 1 cut(s) 73
Eco88I CYCGRG 1 cut(s) 96
EcoRI GAATTC 1 cut(s) 154
EcoRII CCWGG 1 cut(s) 41
EcoT14I CCWWGG 1 cut(s) 88
ErhI CCWWGG 1 cut(s) 88
HapII CCGG 1 cut(s) 97
HincII GTYRAC 1 cut(s) 163
HindII GTYRAC 1 cut(s) 163
HindIII AAGCTT 1 cut(s) 47
HinfI GANTC 1 cut(s) 20
HpaII CCGG 1 cut(s) 97
Hpy166II GTNNAC 3 cut(s) 76, 115, 163
Hpy188III TCNNGA 1 cut(s) 34
Hpy8I GTNNAC 3 cut(s) 76, 115, 163
HpyAV CCTTC 1 cut(s) 10
HpyCH4III ACNGT 1 cut(s) 119
HpyCH4IV ACGT 1 cut(s) 72
HpyCH4V TGCA 1 cut(s) 70
HpySE526I ACGT 1 cut(s) 72
LmnI GCTCC 1 cut(s) 98
LpnPI CCDG 3 cut(s) 28, 55, 110
MaeII ACGT 1 cut(s) 72
MboII GAAGA 2 cut(s) 22, 25
MluCI AATT 1 cut(s) 154
MlyI GAGTC 1 cut(s) 14
MmeI TCCRAC 1 cut(s) 82
MnlI CCTC 2 cut(s) 49, 55
MroXI GAANNNNTTC 1 cut(s) 50
MseI TTAA 1 cut(s) 122
MspI CCGG 1 cut(s) 97
MspR9I CCNGG 3 cut(s) 43, 97, 98
MvaI CCWGG 1 cut(s) 43
NciI CCSGG 2 cut(s) 97, 98
NlaIV GGNNCC 2 cut(s) 78, 94
PdmI GAANNNNTTC 1 cut(s) 50
PleI GAGTC 1 cut(s) 14
PmaCI CACGTG 1 cut(s) 73
PmlI CACGTG 1 cut(s) 73
PpsI GAGTC 1 cut(s) 14
Ppu21I YACGTR 1 cut(s) 73
Psp6I CCWGG 1 cut(s) 41
PspCI CACGTG 1 cut(s) 73
PspGI CCWGG 1 cut(s) 41
PspN4I GGNNCC 2 cut(s) 78, 94
PspPI GGNCC 1 cut(s) 76
SaqAI TTAA 1 cut(s) 122
Sau96I GGNCC 1 cut(s) 76
SchI GAGTC 1 cut(s) 14
ScrFI CCNGG 3 cut(s) 43, 97, 98
SetI ASST 4 cut(s) 51, 60, 66, 75
SinI GGWCC 1 cut(s) 76
SmaI CCCGGG 1 cut(s) 98
Sse9I AATT 1 cut(s) 154
SsiI CCGC 2 cut(s) 7, 126
StyD4I CCNGG 3 cut(s) 41, 95, 96
StyI CCWWGG 1 cut(s) 88
TaaI ACNGT 1 cut(s) 119
TaiI ACGT 1 cut(s) 75
TaqI TCGA 2 cut(s) 54, 137
TasI AATT 1 cut(s) 154
Tru1I TTAA 1 cut(s) 122
Tru9I TTAA 1 cut(s) 122
TspMI CCCGGG 1 cut(s) 96
VpaK11BI GGWCC 1 cut(s) 76
XapI RAATTY 1 cut(s) 154
XmaI CCCGGG 1 cut(s) 96
XmnI GAANNNNTTC 1 cut(s) 50
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.