Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0008987

Physical Location & Seq

Genomic Coordinates Forward (+)

36433749 .. 36439630

Gene Structure 5882 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1309100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2910 bp

ATGAGATTCTTTAGAGTTTCTTTACAGCAATGCTTATCTGTTAACTCATTTTGTCGTCAGATTCATCGTGCCACCTATTTCAAGCCATTATTTGCAAGTAGCGTGCTTAGCATTGTACAGATTCTACTTGATCAAACACGACATGATGAAATACGTCTTTTAGGATGCGAAACTCTTTTTGAGTTTGTAAATAATCAGAAGGATGGTACGTATATGTTTAACTTAGATGGCATGATTCCAAAACTTTGTCTCTTAGCTCAAGAAACGAGGGAGGATGGGATGGATAAGCGTTTGCGTTCTGCTGGGCTTCAAGTTCTTTCATCAATGGTTTGGTTCATGGGTGAATTCTCTCATATTTCATCAGAATTCGATAGTGTTGTTTCAGTAGTCTTGGAAAATCATGGAGGTCCAAAGAAAAAGTCAGACAAACAAGACACCCAGACTGGGAGTTCCGAAGAAGTTTCAGCTTCACTAGAACCCGTGACAAGGATTTCGTCCTGGAGGCTGTTAGTGAGTGACAGAGGCGAAGTCCTTGTGGCAGGGGACGACATGAATAACCCCATATTTTGGTCAAGGGTTTGCCTGCACAACATTGCCAAGTTAGCCAAGGAAGCTACAACCGTGCGGCGTGTATTAGAATCTTTGTTCCGCTATTTTGATAATGGAGATCTCTGGTCTCCTAAACACGGGCTCGCACTGTCTGTCTTGATGGATATGCAGATAATAATTGAAAATTATGGGCAGAACAGGCACTTCATATTGTCCATCTTAATTAAGCATCTTGATCACAAGAATGTTCTTAAAAACCCAAATATGCAGCTGGACATTGTAGATGTTGCCACCTCTCTTGCTCGAGAAGCAAAGGTTCAATCATCAGTTGCTATAATTGGTGCTCTGAGTGATATGATGAGACACCTGCGGAAAAGTATACATTGCTCACTTGATGATTCAAATTTGGGGGCCGAAGTAATTGAATGGAACCGAAAATTTCAAGCAGCAGTGGATGAGTGCCTTGTGCAGTTGATACATAAGGTAGGAGATGCAGGTCCTGTTCTTGATATGATGGCCGTGATGTTAGAAAACATGACTAACATTACCGTTATGGCTAGAACCTTGATTTCTACTGTTTACCGTACTGGTCAAATTGTGGCAACAATACCTAATTTGACATATCAAAACAAGACATTTCCTGAGGCATTATTTCATCAGTTACTCGTAGCTATGGTCTGTGTAGACCATGAAACCAGGGTGGGCGCACACCGTATATTTTCTGTCGTGCTTGTTCCCTCATCTGTTTGCCCTCGTCCATGTGCTGCTACTCCCATTACTACAGAGAAAAATAATATTGGAAGGACTCTCTCAAGAACTGTATCAGTATTTTCTTCATCAGCTGCCCTCTTTGAAAAACTAAACAAGGGATCACACTCACAACAAAACATTGGTCAGGAGCTGAAGGACAAAGTTGTAATTCAGGAAGAAGCAAAAGTTCCTAATGAGTCCATGCTGAACAGATTGAAGTCCAAATTCAGTTCAAGAAGGCATCCATCAGCTACAAGTGACCCTGTAGGTAATGAGGATGCTTCAGTCAGTAATCATTCTGTGATGAACCGGTTGAAGTCAACTTATAGCCGAGCCTACAGTATTAGAAGGAATCCATCAAATACACCTTCTGCTGATGAAAAAACTACTAGTATTTCAGATAAAGAATCGACAATGTCCCTTAGGTTAAGCACTCGCCAGATTACCCTTCTGCTTTCATCAATCTGGGCACAATCCATCTCTCCTTTAAATACACCTGAGAACTATGAAGCAATTGCTAATACCTACAGCCTTGTGCTGCTTTATGCTCGGACCAAGAACACATCCGACGAGACCCTAATCCGAAGTTTTCAGCTAGCCTTTTCCTTAAGGAGCATTTCTCTTGGAGGAGGATTACAGCCATCAAGACGCAGATCCCTCTTTACCTTGGCAACATCGATGATCATCTTCTCAGCTAAAGCCTACAATGTGGTTGCTCTTGCCCCTTGTGCTAAAGCAGCACTTACAAATGAAACAGTTGATCCATTTCTACGACTGGTTGACGATCACAAGTTGCAAGCTGTCATTTCTGGACCTGACCAAGTAAGGAAAGTTTATGGATCAAAAGAAGATGATGAGAATGCTTTAAGGTCACTTTCCGCCATAGAAAAATCTGAGAACCAATCGAAGGAATCATTTGCTACCATGATAGTGCAGACGCTTAGAAATTCACCAGAGGATTCATCAATTATAAAACAGCAGTTGCTTAATGATTTTATGCCTGATGATGCATGTCCTTTGGGAGCTCCGTTGAGCATGGAAACACCAATAGAGATCGACCAAGTTGGCGTACAAGATGACGGAGAACCTGATAAGGCTGAGCCCCCATTATTCACAATTGAAGATGATGTGTTAGCCAATGCATCTGAAAATCAAACCGACCCAGACACAAAAGTTGCCGTGGAAAGTCTAAGCTTAATAAGCATTGACGAGCTTTTAAATTCGGTTTCGGAGACAACTCATCAAGTTGGACGATTATCAGTGTCAGTTGCGACAAACATGCCTTACATGGAAATGGCTGGCCAGTGTGAGGCCCTTCAAATGGGGAAGCAGCAGAAGTTGTCGACGTTTATAGTTGCTCAACAGAGACAAGAAAGTTTGATTAGATTTTCTAATGATTGCAACCAGCAGGAAAAGGAAACCCCCTCTCTTCTTCCGTTGGGCGCTCCTACGAGTGGAAATCCATTCCTTGAATCAAATGCCGTTTCACTCAACCAATCTGTTGGCAACGGCTCTTCGATGCTTTGCGCAACTGAGTATCAGTACTATCCACACTTTCAGCTACCGGCATCAAGCCCCTACGATAACTTTTTAAAGGCTGCTGGCTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

970

Amino Acids

107.46

Weight (kDa)

5.9

Isoelectric Point (pI)

44.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008987)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G21080
fragaria_vesca	FvH4_7g01250
malus_domestica	MD02G1309100.v1.1 MD07G1013500.v1.1 MD07G1017100.v1.1
prunus_persica	Prupe.2G016800_v2.0.a1 Prupe.2G016800_v2.0.a1
pyrus_communis	pycom03g10630 pycom07g01100 pycom07g01110
rosa_chinensis	RchiOBHm_Chr1g0317001
rosa_laevigata	RLG00000030634
rosa_multiflora	Rmu_sc0002278.1_g000001 Rmu_sc0009007.1_g000001
rosa_roxburghii	Rroxscaffold_4G00330750
rosa_rugosa	Rorug01G0013600.1 Rorug01G0013700 Rorug01G0013700
rosa_samantha	Rh1AG024800 Rh1BG021600 Rh1CG023200 Rh1DG022000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2270
AarI	CACCTGC	1 cut(s)	924
Acc16I	TGCGCA	1 cut(s)	2827
Acc36I	ACCTGC	2 cut(s)	924, 1034
AccB7I	CCANNNNNTGG	1 cut(s)	567
AccI	GTMKAC	3 cut(s)	928, 1233, 2642
AciI	CCGC	4 cut(s)	625, 649, 919, 2178
AclWI	GGATC	4 cut(s)	1426, 1947, 2054, 2146
AcoI	YGGCCR	2 cut(s)	1065, 2599
AcsI	RAATTY	7 cut(s)	344, 365, 952, 986, 1523, 2245, 2518
AcuI	CTGAAG	2 cut(s)	1472, 1566
AfaI	GTAC	5 cut(s)	117, 208, 1135, 2370, 2843
AfiI	CCNNNNNNNGG	8 cut(s)	444, 486, 567, 686, 2206, 2608, 2620, 2753
AflII	CTTAAG	1 cut(s)	1906
AgeI	ACCGGT	1 cut(s)	1608
AhlI	ACTAGT	1 cut(s)	1688
AjnI	CCWGG	2 cut(s)	497, 1244
Alw21I	GWGCWC	2 cut(s)	895, 2326
Alw26I	GTCTC	6 cut(s)	254, 681, 904, 1865, 2525, 2659
AlwI	GGATC	4 cut(s)	1426, 1947, 2054, 2146
AlwNI	CAGNNNCTG	2 cut(s)	1049, 1450
Ama87I	CYCGRG	1 cut(s)	852
AoxI	GGCC	4 cut(s)	960, 1065, 2599, 2610
ApeKI	GCWGC	8 cut(s)	817, 995, 1313, 1391, 1837, 2036, 2629, 2897
ApoI	RAATTY	7 cut(s)	344, 365, 952, 986, 1523, 2245, 2518
ArsI	GACNNNNNNTTYG	6 cut(s)	404, 436, 475, 507, 1426, 1458
AsiGI	ACCGGT	1 cut(s)	1608
AspLEI	GCGC	3 cut(s)	1256, 2744, 2828
AspS9I	GGNCC	6 cut(s)	407, 960, 1046, 1851, 2111, 2611
AsuHPI	GGTGA	2 cut(s)	353, 2241
AsuNHI	GCTAGC	1 cut(s)	1894
AvaI	CYCGRG	1 cut(s)	852
AvaII	GGWCC	4 cut(s)	407, 1046, 1851, 2111
AxyI	CCTNAGG	2 cut(s)	1191, 1721
BaeGI	GKGCMC	1 cut(s)	1771
BalI	TGGCCA	1 cut(s)	2601
BanII	GRGCYC	3 cut(s)	693, 2326, 2403
Bbv12I	GWGCWC	2 cut(s)	895, 2326
BbvI	GCAGC	8 cut(s)	829, 1007, 1300, 1378, 1824, 2048, 2641, 2884
BceAI	ACGGC	4 cut(s)	1052, 2462, 2765, 2824
BcgI	CGANNNNNNTGC	2 cut(s)	2560, 2594
BciT130I	CCWGG	2 cut(s)	499, 1246
BclI	TGATCA	3 cut(s)	130, 784, 1980
BcoDI	GTCTC	6 cut(s)	254, 681, 904, 1865, 2525, 2659
BcuI	ACTAGT	1 cut(s)	1688
BfaI	CTAG	4 cut(s)	473, 1107, 1689, 1895
BfmI	CTRYAG	4 cut(s)	1329, 1563, 1636, 1825
BfoI	RGCGCY	1 cut(s)	2745
BfrI	CTTAAG	1 cut(s)	1906
BfuAI	ACCTGC	2 cut(s)	924, 1034
BglII	AGATCT	1 cut(s)	667
BisI	GCNGC	9 cut(s)	626, 818, 996, 1314, 1392, 1838, 2037, 2630, 2898
BlpI	GCTNAGC	2 cut(s)	107, 2397
BlsI	GCNGC	9 cut(s)	627, 819, 997, 1315, 1393, 1839, 2038, 2631, 2899
BmcAI	AGTACT	1 cut(s)	2843
Bme1390I	CCNGG	2 cut(s)	499, 1246
Bme18I	GGWCC	4 cut(s)	407, 1046, 1851, 2111
BmeT110I	CYCGRG	1 cut(s)	852
BmgT120I	GGNCC	6 cut(s)	407, 960, 1046, 1851, 2111, 2611
BmiI	GGNNCC	2 cut(s)	961, 980
BmrFI	CCNGG	2 cut(s)	499, 1246
BmrI	ACTGGG	1 cut(s)	453
BmsI	GCATC	9 cut(s)	155, 787, 1030, 1549, 1567, 2296, 2450, 2808, 2876
BmtI	GCTAGC	1 cut(s)	1898
BmuI	ACTGGG	1 cut(s)	453
BplI	GAGNNNNNCTC	2 cut(s)	1903, 1935
BpmI	CTGGAG	1 cut(s)	520
Bpu1102I	GCTNAGC	2 cut(s)	107, 2397
BpuEI	CTTGAG	2 cut(s)	243, 1345
Bsa29I	ATCGAT	1 cut(s)	1976
BsaAI	YACGTR	1 cut(s)	210
BsaBI	GATNNNNATC	1 cut(s)	1982
BsaI	GGTCTC	2 cut(s)	681, 1865
BsaJI	CCNNGG	4 cut(s)	606, 1245, 1965, 2478
BsaWI	WCCGGW	1 cut(s)	1608
Bsc4I	CCNNNNNNNGG	8 cut(s)	444, 486, 567, 686, 2206, 2608, 2620, 2753
Bse118I	RCCGGY	2 cut(s)	1608, 2863
Bse1I	ACTGG	4 cut(s)	448, 1141, 2079, 2602
Bse21I	CCTNAGG	2 cut(s)	1191, 1721
Bse3DI	GCAATG	3 cut(s)	35, 591, 931
Bse8I	GATNNNNATC	1 cut(s)	1982
BseBI	CCWGG	2 cut(s)	499, 1246
BseCI	ATCGAT	1 cut(s)	1976
BseDI	CCNNGG	4 cut(s)	606, 1245, 1965, 2478
BseGI	GGATG	8 cut(s)	170, 208, 280, 285, 1009, 1540, 1582, 1862
BseJI	GATNNNNATC	1 cut(s)	1982
BseLI	CCNNNNNNNGG	8 cut(s)	444, 486, 567, 686, 2206, 2608, 2620, 2753
BseMI	GCAATG	3 cut(s)	35, 591, 931
BseMII	CTCAG	7 cut(s)	887, 1182, 1788, 2004, 2184, 2388, 2823
BseNI	ACTGG	4 cut(s)	448, 1141, 2079, 2602
BseRI	GAGGAG	1 cut(s)	1941
BseSI	GKGCMC	1 cut(s)	1771
BseXI	GCAGC	8 cut(s)	829, 1007, 1300, 1378, 1824, 2048, 2641, 2884
BseYI	CCCAGC	1 cut(s)	302
BsgI	GTGCAG	3 cut(s)	569, 1037, 2252
BshFI	GGCC	4 cut(s)	962, 1067, 2601, 2612
BshTI	ACCGGT	1 cut(s)	1608
BshVI	ATCGAT	1 cut(s)	1976
BsiHKAI	GWGCWC	2 cut(s)	895, 2326
BsiHKCI	CYCGRG	1 cut(s)	852
BsiSI	CCGG	2 cut(s)	1609, 2864
BslFI	GGGAC	2 cut(s)	557, 1702
BslI	CCNNNNNNNGG	8 cut(s)	444, 486, 567, 686, 2206, 2608, 2620, 2753
BsmAI	GTCTC	6 cut(s)	254, 681, 904, 1865, 2525, 2659
BsmFI	GGGAC	2 cut(s)	557, 1702
BsmI	GAATGC	1 cut(s)	2164
BsnI	GGCC	4 cut(s)	962, 1067, 2601, 2612
Bso31I	GGTCTC	2 cut(s)	681, 1865
BsoBI	CYCGRG	1 cut(s)	852
Bsp1286I	GDGCHC	5 cut(s)	693, 895, 1771, 2326, 2403
Bsp1407I	TGTACA	1 cut(s)	115
Bsp1720I	GCTNAGC	2 cut(s)	107, 2397
BspACI	CCGC	4 cut(s)	625, 649, 919, 2178
BspANI	GGCC	4 cut(s)	962, 1067, 2601, 2612
BspCNI	CTCAG	7 cut(s)	888, 1183, 1789, 2003, 2185, 2389, 2824
BspDI	ATCGAT	1 cut(s)	1976
BspLI	GGNNCC	2 cut(s)	961, 980
BspMI	ACCTGC	2 cut(s)	924, 1034
BspOI	GCTAGC	1 cut(s)	1898
BspPI	GGATC	4 cut(s)	1426, 1947, 2054, 2146
BspQI	GCTCTTC	1 cut(s)	2818
BspTI	CTTAAG	1 cut(s)	1906
BspTNI	GGTCTC	2 cut(s)	681, 1865
BsrDI	GCAATG	3 cut(s)	35, 591, 931
BsrFI	RCCGGY	2 cut(s)	1608, 2863
BsrGI	TGTACA	1 cut(s)	115
BsrI	ACTGG	4 cut(s)	448, 1141, 2079, 2602
BssAI	RCCGGY	2 cut(s)	1608, 2863
BssECI	CCNNGG	4 cut(s)	606, 1245, 1965, 2478
BssNAI	GTATAC	1 cut(s)	929
BssT1I	CCWWGG	2 cut(s)	606, 1965
Bst1107I	GTATAC	1 cut(s)	929
Bst2UI	CCWGG	2 cut(s)	499, 1246
Bst4CI	ACNGT	9 cut(s)	622, 699, 1099, 1126, 1133, 1262, 1369, 1640, 2056
Bst6I	CTCTTC	2 cut(s)	2733, 2818
BstAFI	CTTAAG	1 cut(s)	1906
BstAUI	TGTACA	1 cut(s)	115
BstBAI	YACGTR	1 cut(s)	210
BstC8I	GCNNGC	7 cut(s)	104, 584, 693, 1896, 2097, 2599, 2902
BstDSI	CCRYGG	1 cut(s)	2478
BstF5I	GGATG	8 cut(s)	170, 208, 280, 285, 1009, 1540, 1582, 1862
BstH2I	RGCGCY	1 cut(s)	2745
BstHHI	GCGC	3 cut(s)	1256, 2744, 2828
BstMAI	GTCTC	6 cut(s)	254, 681, 904, 1865, 2525, 2659
BstMWI	GCNNNNNNNGC	8 cut(s)	108, 602, 611, 748, 857, 2027, 2036, 2499
BstNI	CCWGG	2 cut(s)	499, 1246
BstNSI	RCATGY	2 cut(s)	2313, 2581
BstSCI	CCNGG	2 cut(s)	497, 1244
BstSFI	CTRYAG	4 cut(s)	1329, 1563, 1636, 1825
BstSLI	GKGCMC	1 cut(s)	1771
BstSNI	TACGTA	1 cut(s)	210
BstV1I	GCAGC	8 cut(s)	829, 1007, 1300, 1378, 1824, 2048, 2641, 2884
BstX2I	RGATCY	2 cut(s)	667, 1952
BstXI	CCANNNNNNTGG	1 cut(s)	2801
BstYI	RGATCY	2 cut(s)	667, 1952
BstZ17I	GTATAC	1 cut(s)	929
Bsu15I	ATCGAT	1 cut(s)	1976
Bsu36I	CCTNAGG	2 cut(s)	1191, 1721
BsuRI	GGCC	4 cut(s)	962, 1067, 2601, 2612
BsuTUI	ATCGAT	1 cut(s)	1976
BtgI	CCRYGG	1 cut(s)	2478
BtsCI	GGATG	8 cut(s)	170, 208, 280, 285, 1009, 1540, 1582, 1862
BtsI	GCAGTG	1 cut(s)	1005
BtsIMutI	CAGTG	4 cut(s)	695, 1005, 2565, 2609
BveI	ACCTGC	2 cut(s)	924, 1034
Cac8I	GCNNGC	7 cut(s)	104, 584, 693, 1896, 2097, 2599, 2902
CaiI	CAGNNNCTG	2 cut(s)	1049, 1450
CfoI	GCGC	3 cut(s)	1256, 2744, 2828
Cfr10I	RCCGGY	2 cut(s)	1608, 2863
Cfr13I	GGNCC	6 cut(s)	407, 960, 1046, 1851, 2111, 2611
ClaI	ATCGAT	1 cut(s)	1976
CseI	GACGC	2 cut(s)	1956, 2245
Csp6I	GTAC	5 cut(s)	116, 207, 1134, 2369, 2842
CspAI	ACCGGT	1 cut(s)	1608
CspCI	CAANNNNNGTGG	2 cut(s)	829, 864
CviQI	GTAC	5 cut(s)	116, 207, 1134, 2369, 2842
DraI	TTTAAA	3 cut(s)	1788, 2517, 2892
EaeI	YGGCCR	2 cut(s)	1065, 2599
Eam1104I	CTCTTC	2 cut(s)	2733, 2818
EarI	CTCTTC	2 cut(s)	2733, 2818
EciI	GGCGGA	1 cut(s)	2167
Ecl136II	GAGCTC	1 cut(s)	2324
Eco105I	TACGTA	1 cut(s)	210
Eco130I	CCWWGG	2 cut(s)	606, 1965
Eco24I	GRGCYC	3 cut(s)	693, 2326, 2403
Eco31I	GGTCTC	2 cut(s)	681, 1865
Eco47I	GGWCC	4 cut(s)	407, 1046, 1851, 2111
Eco53kI	GAGCTC	1 cut(s)	2324
Eco57I	CTGAAG	2 cut(s)	1472, 1566
Eco81I	CCTNAGG	2 cut(s)	1191, 1721
Eco88I	CYCGRG	1 cut(s)	852
EcoICRI	GAGCTC	1 cut(s)	2324
EcoO109I	RGGNCCY	2 cut(s)	1046, 2611
EcoRI	GAATTC	2 cut(s)	344, 365
EcoRII	CCWGG	2 cut(s)	497, 1244
EcoT14I	CCWWGG	2 cut(s)	606, 1965
EcoT22I	ATGCAT	2 cut(s)	2311, 2443
EcoT38I	GRGCYC	3 cut(s)	693, 2326, 2403
ErhI	CCWWGG	2 cut(s)	606, 1965
FalI	AAGNNNNNCTT	2 cut(s)	2025, 2057
FaqI	GGGAC	2 cut(s)	557, 1702
FbaI	TGATCA	3 cut(s)	130, 784, 1980
FblI	GTMKAC	3 cut(s)	928, 1233, 2642
Fnu4HI	GCNGC	9 cut(s)	626, 818, 996, 1314, 1392, 1838, 2037, 2630, 2898
FokI	GGATG	8 cut(s)	177, 215, 287, 292, 1016, 1527, 1589, 1849
FriOI	GRGCYC	3 cut(s)	693, 2326, 2403
Fsp4HI	GCNGC	9 cut(s)	626, 818, 996, 1314, 1392, 1838, 2037, 2630, 2898
FspBI	CTAG	4 cut(s)	473, 1107, 1689, 1895
FspI	TGCGCA	1 cut(s)	2827
GlaI	GCGC	3 cut(s)	1255, 2743, 2827
GluI	GCNGC	9 cut(s)	626, 818, 996, 1314, 1392, 1838, 2037, 2630, 2898
GsaI	CCCAGC	1 cut(s)	306
GsuI	CTGGAG	1 cut(s)	520
HaeII	RGCGCY	1 cut(s)	2745
HaeIII	GGCC	4 cut(s)	962, 1067, 2601, 2612
HapII	CCGG	2 cut(s)	1609, 2864
HgaI	GACGC	2 cut(s)	1956, 2245
HhaI	GCGC	3 cut(s)	1256, 2744, 2828
Hin6I	GCGC	3 cut(s)	1254, 2742, 2826
HinP1I	GCGC	3 cut(s)	1254, 2742, 2826
HincII	GTYRAC	4 cut(s)	43, 1620, 2080, 2643
HindII	GTYRAC	4 cut(s)	43, 1620, 2080, 2643
HindIII	AAGCTT	1 cut(s)	2491
HpaI	GTTAAC	1 cut(s)	43
HpaII	CCGG	2 cut(s)	1609, 2864
HphI	GGTGA	2 cut(s)	353, 2241
Hpy166II	GTNNAC	7 cut(s)	43, 929, 1129, 1234, 1620, 2080, 2643
Hpy8I	GTNNAC	7 cut(s)	43, 929, 1129, 1234, 1620, 2080, 2643
Hpy99I	CGWCG	2 cut(s)	1871, 2647
HpyAV	CCTTC	9 cut(s)	193, 1344, 1447, 1530, 1641, 1677, 1757, 2200, 2624
HpyCH4III	ACNGT	9 cut(s)	622, 699, 1099, 1126, 1133, 1262, 1369, 1640, 2056
HpyCH4IV	ACGT	3 cut(s)	154, 209, 2645
HpyF10VI	GCNNNNNNNGC	8 cut(s)	108, 602, 611, 748, 857, 2027, 2036, 2499
HpySE526I	ACGT	3 cut(s)	154, 209, 2645
HspAI	GCGC	3 cut(s)	1254, 2742, 2826
Ksp22I	TGATCA	3 cut(s)	130, 784, 1980
KspAI	GTTAAC	1 cut(s)	43
LguI	GCTCTTC	1 cut(s)	2818
LmnI	GCTCC	5 cut(s)	1447, 1911, 2321, 2329, 2749
Lsp1109I	GCAGC	8 cut(s)	829, 1007, 1300, 1378, 1824, 2048, 2641, 2884
LweI	GCATC	9 cut(s)	155, 787, 1030, 1549, 1567, 2296, 2450, 2808, 2876
MaeI	CTAG	4 cut(s)	473, 1107, 1689, 1895
MaeII	ACGT	3 cut(s)	154, 209, 2645
MaeIII	GTNAC	5 cut(s)	481, 515, 1209, 1556, 2169
MboII	GAAGA	9 cut(s)	467, 1374, 1487, 1978, 2159, 2432, 2720, 2723, 2805
MfeI	CAATTG	2 cut(s)	1812, 2415
MflI	RGATCY	2 cut(s)	667, 1952
MhlI	GDGCHC	5 cut(s)	693, 895, 1771, 2326, 2403
MlsI	TGGCCA	1 cut(s)	2601
MluNI	TGGCCA	1 cut(s)	2601
MlyI	GAGTC	2 cut(s)	1348, 1505
MmeI	TCCRAC	2 cut(s)	1890, 2527
Mox20I	TGGCCA	1 cut(s)	2601
Mph1103I	ATGCAT	2 cut(s)	2311, 2443
MscI	TGGCCA	1 cut(s)	2601
MslI	CAYNNNNRTG	3 cut(s)	792, 2228, 2591
Msp20I	TGGCCA	1 cut(s)	2601
MspA1I	CMGCKG	2 cut(s)	820, 1391
MspCI	CTTAAG	1 cut(s)	1906
MspI	CCGG	2 cut(s)	1609, 2864
MspR9I	CCNGG	2 cut(s)	499, 1246
MunI	CAATTG	2 cut(s)	1812, 2415
Mva1269I	GAATGC	1 cut(s)	2164
MvaI	CCWGG	2 cut(s)	499, 1246
MwoI	GCNNNNNNNGC	8 cut(s)	108, 602, 611, 748, 857, 2027, 2036, 2499
NheI	GCTAGC	1 cut(s)	1894
NlaIV	GGNNCC	2 cut(s)	961, 980
NmeAIII	GCCGAG	1 cut(s)	1655
NmuCI	GTSAC	4 cut(s)	481, 515, 1556, 2169
NsbI	TGCGCA	1 cut(s)	2827
NsiI	ATGCAT	2 cut(s)	2311, 2443
NspI	RCATGY	2 cut(s)	2313, 2581
PacI	TTAATTAA	1 cut(s)	774
PaeR7I	CTCGAG	1 cut(s)	852
PaqCI	CACCTGC	1 cut(s)	924
PciSI	GCTCTTC	1 cut(s)	2818
PctI	GAATGC	1 cut(s)	2164
PflFI	GACNNNGTC	1 cut(s)	1714
PflMI	CCANNNNNTGG	1 cut(s)	567
PfoI	TCCNGGA	1 cut(s)	497
PinAI	ACCGGT	1 cut(s)	1608
PkrI	GCNGC	9 cut(s)	627, 819, 997, 1315, 1393, 1839, 2038, 2631, 2899
PleI	GAGTC	2 cut(s)	1348, 1504
PpsI	GAGTC	2 cut(s)	1348, 1504
Ppu21I	YACGTR	1 cut(s)	210
PpuMI	RGGWCCY	1 cut(s)	1046
PsiI	TTATAA	1 cut(s)	2270
Psp124BI	GAGCTC	1 cut(s)	2326
Psp5II	RGGWCCY	1 cut(s)	1046
Psp6I	CCWGG	2 cut(s)	497, 1244
PspFI	CCCAGC	1 cut(s)	302
PspGI	CCWGG	2 cut(s)	497, 1244
PspN4I	GGNNCC	2 cut(s)	961, 980
PspPI	GGNCC	6 cut(s)	407, 960, 1046, 1851, 2111, 2611
PspPPI	RGGWCCY	1 cut(s)	1046
PstNI	CAGNNNCTG	2 cut(s)	1049, 1450
PsuI	RGATCY	2 cut(s)	667, 1952
PsyI	GACNNNGTC	1 cut(s)	1714
PvuII	CAGCTG	2 cut(s)	820, 1391
RsaI	GTAC	5 cut(s)	117, 208, 1135, 2370, 2843
RsaNI	GTAC	5 cut(s)	116, 207, 1134, 2369, 2842
RseI	CAYNNNNRTG	3 cut(s)	792, 2228, 2591
SacI	GAGCTC	1 cut(s)	2326
SalI	GTCGAC	1 cut(s)	2641
SapI	GCTCTTC	1 cut(s)	2818
SatI	GCNGC	9 cut(s)	626, 818, 996, 1314, 1392, 1838, 2037, 2630, 2898
Sau96I	GGNCC	6 cut(s)	407, 960, 1046, 1851, 2111, 2611
ScaI	AGTACT	1 cut(s)	2843
SchI	GAGTC	2 cut(s)	1348, 1505
ScrFI	CCNGG	2 cut(s)	499, 1246
SduI	GDGCHC	5 cut(s)	693, 895, 1771, 2326, 2403
SfaNI	GCATC	9 cut(s)	155, 787, 1030, 1549, 1567, 2296, 2450, 2808, 2876
SfcI	CTRYAG	4 cut(s)	1329, 1563, 1636, 1825
Sfr274I	CTCGAG	1 cut(s)	852
SinI	GGWCC	4 cut(s)	407, 1046, 1851, 2111
SlaI	CTCGAG	1 cut(s)	852
SmiMI	CAYNNNNRTG	3 cut(s)	792, 2228, 2591
SmlI	CTYRAG	4 cut(s)	258, 852, 1360, 1906
SmoI	CTYRAG	4 cut(s)	258, 852, 1360, 1906
SnaBI	TACGTA	1 cut(s)	210
SpeI	ACTAGT	1 cut(s)	1688
SsiI	CCGC	4 cut(s)	625, 649, 919, 2178
SspI	AATATT	1 cut(s)	1345
SspMI	CTAG	4 cut(s)	473, 1107, 1689, 1895
SstI	GAGCTC	1 cut(s)	2326
StyD4I	CCNGG	2 cut(s)	497, 1244
StyI	CCWWGG	2 cut(s)	606, 1965
TaaI	ACNGT	9 cut(s)	622, 699, 1099, 1126, 1133, 1262, 1369, 1640, 2056
TaiI	ACGT	3 cut(s)	157, 212, 2648
TaqI	TCGA	8 cut(s)	369, 853, 1709, 1976, 2204, 2355, 2642, 2816
TatI	WGTACW	2 cut(s)	115, 2841
TauI	GCSGC	1 cut(s)	628
TscAI	CASTG	4 cut(s)	702, 1005, 2565, 2609
TseFI	GTSAC	4 cut(s)	481, 515, 1556, 2169
TseI	GCWGC	8 cut(s)	817, 995, 1313, 1391, 1837, 2036, 2629, 2897
Tsp45I	GTSAC	4 cut(s)	481, 515, 1556, 2169
TspGWI	ACGGA	3 cut(s)	2316, 2394, 2724
TspRI	CASTG	4 cut(s)	702, 1005, 2565, 2609
Tth111I	GACNNNGTC	1 cut(s)	1714
Van91I	CCANNNNNTGG	1 cut(s)	567
Vha464I	CTTAAG	1 cut(s)	1906
VpaK11BI	GGWCC	4 cut(s)	407, 1046, 1851, 2111
XapI	RAATTY	7 cut(s)	344, 365, 952, 986, 1523, 2245, 2518
XceI	RCATGY	2 cut(s)	2313, 2581
XhoI	CTCGAG	1 cut(s)	852
XmiI	GTMKAC	3 cut(s)	928, 1233, 2642
XspI	CTAG	4 cut(s)	473, 1107, 1689, 1895
ZrmI	AGTACT	1 cut(s)	2843
Zsp2I	ATGCAT	2 cut(s)	2311, 2443

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.