Rh1DG022000

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0008987
Physical Location & Seq
Forward (+)
3406352 .. 3419788
13437 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG022000.1

Sequence Viewer

Length: 3129 bp
ATGGGGATGATCTCAAGGCAAGTTTTCCCTGTTTGTGAAAGCCTCTGCTTCTTTTGTCCTGCATTGCGTGCCAGATCACGCCATCCCGTCAAGCGTTACAAGAAGTTGCTCGCCGAGATTTTTCCTCGCTCTCCGGATGAAGAACCAAATGACCGCAAGATCAGTAAACTATGTGAATATGCCTCAAAAACTCCTCTCCGTATTCCAAAGATCACATCTACTCTGGAGCAAAGATGTTACAAGGACTTGAGAACTGAGAACTTCCACTCTGTAAAAGTGGTCATGTGTATCTACAGGAAGTTGTTGATTTCTTGTAAGGATCAAATGCCATTGTTTGCAAGTAGTCTACTTAGCATTGCTCAAATTCTGCTTGATCAAACACGACATGATGAAATACGTATTTTAGGATGCCAAACTCTTTTCGACTTTGTGAATAATCAGAAGGATGGTACATATATGTTTAACTTAGACAGCATGATTCCAAAACTTTGTCAAATAGCTCAAGAAATGAGGGAGGATGGCACAACAATGAATTTGCGGGCAGCTGGGCTTCAAGTTCTTTCATCAATGGTTTGGTTCATGGGTGAATTCTCTCACATTTCAACAGAATTTGACAATGTTGTTTCAGTTGTCTTGGAAAATTATGGAGGTGTAAAGAAAAATTCAGAACAAGAAGAAGTTTCTCCTTCAGTAGAACCCATGAGAAGGATTCCATCCTGGAGGTTGATAGTGAGTGAAAAAGGAGGCGTCAATGACTTGGGGGAGGATATGCACAACCCTGGATTTTGGTCAAGGGTTTGCCTTCATAACATTGCCAAGTTAGCCAAGGAAGCTACAACTGTACGGCGGGTTTTGGAATCTTTGTTCAGATATTTTGATAATGGCAATCTTTGGTCTCCTAAACATGGGCTTGCTCTGTCTGTCTTGATGAATATGCAGTTAATAATTGAAAATTCCGGACAGAACAGGCATTTCATTTTGTCCATCTTAATTAAGCATCTTGATCACAAGAATGTTCTTAAAAACCCAAATATGCAGCTAGATATTGTTGATGTTGCCACCTCGCTTGCTCGAGAAACAAAGGTTCAATCATCAGTTGCTATAATTGGTGCATTGAGTGATATGATGAGACATCTGCGGAAAAGTATACATTGCTCACTTGATGATTCAAATTTGGGGACAGAAGTTATTGAATGGAACCGAAAATTTCGAGCAGCAGTGGATGACTGCCTTGTTGAGTTAACACATAAGGTAGGAGACGCAGGTCCTGTTCTTGACATGATGGCTGTGATGTTAGAAAACATGTCAAATATTACTGTTATGGCGAGAACCTCAATTTCTGCTGTTTACCGTACTGGTCAAATTGTGGCAACAATACCTGATTTGTCATATAAAAACAAGACTTTTCCTGAGGCATTATTTCATCAATTACTCGTAGCTATGGTCTGTGCTGACCATGAAACCAGGGTCGGTGCACACCGTATTTTGTCTGTTGTTCTTGTTCCATCTTCTGTTTGCCCCCGTCCTCTTGCTGCTGCTCCCCACACTTCAAAGAAAAGTCCTATTGGAAGGACACTCTCAAGAACTGTATCTGTGTTTTCTTCTTCAGCTGCTCTCTTTGAGAAATTAAAGAAAGAGCCATCTCACTCGCAAGAAAACATTAGTCATGAGACCAAGAACAATGCTGTCTTTGGTGAAGAAGCAAAGGTTACTAACGGCTCGATGTTGCACAGATTGAAATCCAAATTCAGTTCAAAAAGACACGCAGCAGCTTCAAATGAACCGCTAGGTGCTGAGGAAGCTACACACAACAACCATCCTACAATGCACAGATTGAAGTCAACTTTAAGCCGAAACTACAGTATGAAAAGGCAACCATCAACTATGACTGCTGCTACAACAGCTCCAAGTGTTCCACATAATGAATCGACAATGTCCCTTAGGTTAAGCAGTCGCCAGATTACCCTTCTGCTTTCATCTATCTGGGCACAGTCCATCTCCCCTTTAAATACGCCTGAAAACTATCAAGCAATTGCTCATACCTACAGCCTTGTGTTGCTATATGCTCGGACTAAGAACACATCCCATGAGACTCTGATCCGAAGTTTTCAGTTAGCATTTTCGTTAAGGAGCATTTCTCTTGGAGGAGGGTTGCAGCCGTCAAGACGCAGATCTCTCTTTACCTTGGCAACATCGATGATTATCTTCTCGGCTAATGCGTACAACATTGTTGCCCTTGCTCCTTCTGCTAAAGCAGCACTTACAAATGAAACAGTTGATCCATTTCTACGGTTAGTTGATGACTCCAAGTTACAGGCTGTTGAATCTAGCCCTGACCAACCAAGGAAAGTTTATGGATCAAAAGAAGATGATGAAGATGCTTTAAGGTCACTTTTGGGTTTAGAAAAAGCTGATAATACTCACAGTAAGGAATCATTCACTACCATGATAGTGAAGACAGTGGCAAAGTCCTCAGATGAATTGTCAACTATGAGGCAGCAGTTACTTACCGATTTTCTTCCTGATGATACATGTCCATTGGGAGCTCCGTTGAGCACGGAGATACCCATACAAATCGACCGATCTAGCTTACCAGATAATGCAGCTCCTGATACTGTTGAACCTCCAATGTTCATAATTGATGATGACGCTTTACACAATGCATCTGAAAGTCAAACAGATCCTAACACAAAATTGGCCGCAGAAAGTCTGAGCCTCATTAGTGTCAATGAGCTTTTAGATTCGGTTGTGGAGACAACACACCAAGTAGGAAGAATGTCAGTCTCAACTGCTTCAGATATGCCTTACATGGAAATGGCTGGCCAATGTGAAGCCCTTCAGATGGGGAAGCAGCAGAAGATGTCTTCTTTCACGGTTGCCCAACAAAGGCAAGAAAGTTTGATTAGATTTTCTGCTCAGGATTCCAATGTAGTAAACGAAGCGCCTTCTTCGGTTGTCCTGGGTGTTCCTACGAGTGGCAATCCATTCCTTGATGCAAGTGCTGTTCCGGTTAACCAACCTGCGGGCAATGGTCCGAAGCTTTGTGCAACTGAATCCCAACATTATCCCCGCTTTCAACTACCTGCGTCGAGCCCATATGATAACTTTTTAAAGGCTGCTGGTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1042

Amino Acids

115.51

Weight (kDa)

7.82

Isoelectric Point (pI)

51.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EFR3_ARM PF21052 65 - 159 6.4e-17 EFR3, armadillo repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 1253, 3028, 3091
AccI GTMKAC 2 cut(s) 346, 1147
AccIII TCCGGA 2 cut(s) 133, 956
AciI CCGC 8 cut(s) 154, 538, 847, 1138, 1784, 2700, 3023, 3070
AclWI GGATC 5 cut(s) 327, 2092, 2273, 2365, 2675
AcoI YGGCCR 2 cut(s) 2697, 2821
AcsI RAATTY 9 cut(s) 363, 532, 587, 608, 661, 952, 1171, 1205, 1745
AcuI CTGAAG 4 cut(s) 672, 1590, 2778, 2822
AcyI GRCGYC 1 cut(s) 747
AfaI GTAC 4 cut(s) 451, 843, 1354, 2222
AfiI CCNNNNNNNGG 6 cut(s) 705, 905, 2842, 2886, 2975, 3022
AflIII ACRYGT 2 cut(s) 1302, 2531
AjnI CCWGG 4 cut(s) 716, 778, 1463, 2958
AloI GAACNNNNNNTCC 2 cut(s) 848, 880
Alw21I GWGCWC 3 cut(s) 1477, 2548, 2558
Alw26I GTCTC 7 cut(s) 900, 1123, 1251, 1664, 2084, 2747, 2788
Alw44I GTGCAC 1 cut(s) 1473
AlwI GGATC 5 cut(s) 327, 2092, 2273, 2365, 2675
AlwNI CAGNNNCTG 2 cut(s) 1268, 2609
Ama87I CYCGRG 1 cut(s) 1071
Aor13HI TCCGGA 2 cut(s) 133, 956
AoxI GGCC 2 cut(s) 2697, 2821
ApaLI GTGCAC 1 cut(s) 1473
ApoI RAATTY 9 cut(s) 363, 532, 587, 608, 661, 952, 1171, 1205, 1745
Asp700I GAANNNNTTC 1 cut(s) 2835
AspLEI GCGC 1 cut(s) 2944
AspS9I GGNCC 2 cut(s) 1265, 3032
AsuHPI GGTGA 2 cut(s) 596, 1706
AvaI CYCGRG 1 cut(s) 1071
AvaII GGWCC 2 cut(s) 1265, 3032
AxyI CCTNAGG 2 cut(s) 1410, 1940
BaeGI GKGCMC 2 cut(s) 1477, 1990
BalI TGGCCA 1 cut(s) 2823
BanII GRGCYC 2 cut(s) 2548, 3095
BbsI GAAGAC 2 cut(s) 2462, 2856
Bbv12I GWGCWC 3 cut(s) 1477, 2548, 2558
BbvCI CCTCAGC 1 cut(s) 1794
BceAI ACGGC 3 cut(s) 860, 1732, 2143
BciT130I CCWGG 4 cut(s) 718, 780, 1465, 2960
BclI TGATCA 2 cut(s) 373, 1003
BcoDI GTCTC 7 cut(s) 900, 1123, 1251, 1664, 2084, 2747, 2788
BfaI CTAG 4 cut(s) 1040, 1787, 2328, 2586
BfmI CTRYAG 3 cut(s) 292, 1858, 2044
BfoI RGCGCY 1 cut(s) 2945
BfuAI ACCTGC 3 cut(s) 1253, 3028, 3091
BglII AGATCT 1 cut(s) 2171
Bme1390I CCNGG 4 cut(s) 718, 780, 1465, 2960
Bme18I GGWCC 2 cut(s) 1265, 3032
BmeT110I CYCGRG 1 cut(s) 1071
BmgT120I GGNCC 2 cut(s) 1265, 3032
BmiI GGNNCC 1 cut(s) 1199
BmrFI CCNGG 4 cut(s) 718, 780, 1465, 2960
BmsI GCATC 5 cut(s) 398, 1006, 2368, 2672, 2983
BoxI GACNNNNGTC 1 cut(s) 1263
BpiI GAAGAC 2 cut(s) 2462, 2856
BplI GAGNNNNNCTC 2 cut(s) 2122, 2154
BpmI CTGGAG 2 cut(s) 245, 739
Bpu10I CCTNAGC 2 cut(s) 1794, 2916
BpuEI CTTGAG 3 cut(s) 268, 486, 1564
Bsa29I ATCGAT 1 cut(s) 2195
BsaAI YACGTR 1 cut(s) 398
BsaBI GATNNNNATC 2 cut(s) 1738, 2201
BsaHI GRCGYC 1 cut(s) 747
BsaI GGTCTC 2 cut(s) 900, 1664
BsaJI CCNNGG 6 cut(s) 778, 825, 1464, 2184, 2342, 2959
BsaWI WCCGGW 3 cut(s) 133, 956, 3007
BsaXI ACNNNNNCTCC 2 cut(s) 1888, 1918
Bsc4I CCNNNNNNNGG 6 cut(s) 705, 905, 2842, 2886, 2975, 3022
Bse1I ACTGG 1 cut(s) 1360
Bse21I CCTNAGG 2 cut(s) 1410, 1940
Bse3DI GCAATG 5 cut(s) 62, 354, 810, 1150, 3034
Bse8I GATNNNNATC 2 cut(s) 1738, 2201
BseAI TCCGGA 2 cut(s) 133, 956
BseBI CCWGG 4 cut(s) 718, 780, 1465, 2960
BseCI ATCGAT 1 cut(s) 2195
BseDI CCNNGG 6 cut(s) 778, 825, 1464, 2184, 2342, 2959
BseJI GATNNNNATC 2 cut(s) 1738, 2201
BseLI CCNNNNNNNGG 6 cut(s) 705, 905, 2842, 2886, 2975, 3022
BseMI GCAATG 5 cut(s) 62, 354, 810, 1150, 3034
BseMII CTCAG 6 cut(s) 246, 1401, 1785, 2487, 2702, 2930
BseNI ACTGG 1 cut(s) 1360
BseRI GAGGAG 2 cut(s) 183, 2160
BseSI GKGCMC 2 cut(s) 1477, 1990
BseYI CCCAGC 1 cut(s) 545
Bsh1285I CGRYCG 1 cut(s) 2581
BshFI GGCC 2 cut(s) 2699, 2823
BshVI ATCGAT 1 cut(s) 2195
BsiEI CGRYCG 1 cut(s) 2581
BsiHKAI GWGCWC 3 cut(s) 1477, 2548, 2558
BsiHKCI CYCGRG 1 cut(s) 1071
BsiSI CCGG 3 cut(s) 134, 957, 3008
BslFI GGGAC 2 cut(s) 1192, 1921
BslI CCNNNNNNNGG 6 cut(s) 705, 905, 2842, 2886, 2975, 3022
BsmAI GTCTC 7 cut(s) 900, 1123, 1251, 1664, 2084, 2747, 2788
BsmBI CGTCTC 1 cut(s) 1251
BsmFI GGGAC 2 cut(s) 1192, 1921
BsnI GGCC 2 cut(s) 2699, 2823
Bso31I GGTCTC 2 cut(s) 900, 1664
BsoBI CYCGRG 1 cut(s) 1071
Bsp1286I GDGCHC 5 cut(s) 1477, 1990, 2548, 2558, 3095
Bsp13I TCCGGA 2 cut(s) 133, 956
BspACI CCGC 8 cut(s) 154, 538, 847, 1138, 1784, 2700, 3023, 3070
BspANI GGCC 2 cut(s) 2699, 2823
BspCNI CTCAG 6 cut(s) 247, 1402, 1786, 2486, 2703, 2929
BspDI ATCGAT 1 cut(s) 2195
BspEI TCCGGA 2 cut(s) 133, 956
BspHI TCATGA 1 cut(s) 1666
BspLI GGNNCC 1 cut(s) 1199
BspMI ACCTGC 3 cut(s) 1253, 3028, 3091
BspPI GGATC 5 cut(s) 327, 2092, 2273, 2365, 2675
BspTNI GGTCTC 2 cut(s) 900, 1664
BsrDI GCAATG 5 cut(s) 62, 354, 810, 1150, 3034
BsrI ACTGG 1 cut(s) 1360
BssECI CCNNGG 6 cut(s) 778, 825, 1464, 2184, 2342, 2959
BssNAI GTATAC 1 cut(s) 1148
BssNI GRCGYC 1 cut(s) 747
BssT1I CCWWGG 3 cut(s) 825, 2184, 2342
Bst1107I GTATAC 1 cut(s) 1148
Bst2UI CCWGG 4 cut(s) 718, 780, 1465, 2960
BstACI GRCGYC 1 cut(s) 747
BstAPI GCANNNNNTGC 1 cut(s) 68
BstBAI YACGTR 1 cut(s) 398
BstC8I GCNNGC 7 cut(s) 69, 111, 540, 912, 1068, 2821, 3025
BstH2I RGCGCY 1 cut(s) 2945
BstHHI GCGC 1 cut(s) 2944
BstMAI GTCTC 7 cut(s) 900, 1123, 1251, 1664, 2084, 2747, 2788
BstMCI CGRYCG 1 cut(s) 2581
BstMWI GCNNNNNNNGC 7 cut(s) 68, 821, 830, 1799, 1901, 2246, 2255
BstNI CCWGG 4 cut(s) 718, 780, 1465, 2960
BstNSI RCATGY 2 cut(s) 1306, 2535
BstPAI GACNNNNGTC 1 cut(s) 1263
BstSCI CCNGG 4 cut(s) 716, 778, 1463, 2958
BstSFI CTRYAG 3 cut(s) 292, 1858, 2044
BstSLI GKGCMC 2 cut(s) 1477, 1990
BstSNI TACGTA 1 cut(s) 398
BstV2I GAAGAC 2 cut(s) 2462, 2856
BstX2I RGATCY 2 cut(s) 2171, 2680
BstYI RGATCY 2 cut(s) 2171, 2680
BstZ17I GTATAC 1 cut(s) 1148
Bsu15I ATCGAT 1 cut(s) 2195
Bsu36I CCTNAGG 2 cut(s) 1410, 1940
BsuRI GGCC 2 cut(s) 2699, 2823
BsuTUI ATCGAT 1 cut(s) 2195
BtsI GCAGTG 1 cut(s) 1224
BtsIMutI CAGTG 2 cut(s) 1224, 2466
BveI ACCTGC 3 cut(s) 1253, 3028, 3091
Cac8I GCNNGC 7 cut(s) 69, 111, 540, 912, 1068, 2821, 3025
CaiI CAGNNNCTG 2 cut(s) 1268, 2609
CciI TCATGA 1 cut(s) 1666
CfoI GCGC 1 cut(s) 2944
Cfr13I GGNCC 2 cut(s) 1265, 3032
ClaI ATCGAT 1 cut(s) 2195
CseI GACGC 5 cut(s) 736, 1268, 2175, 2657, 3075
Csp6I GTAC 4 cut(s) 450, 842, 1353, 2221
CspCI CAANNNNNGTGG 2 cut(s) 1048, 1083
CviQI GTAC 4 cut(s) 450, 842, 1353, 2221
DraI TTTAAA 2 cut(s) 2007, 3111
EaeI YGGCCR 2 cut(s) 2697, 2821
Ecl136II GAGCTC 1 cut(s) 2546
Eco105I TACGTA 1 cut(s) 398
Eco130I CCWWGG 3 cut(s) 825, 2184, 2342
Eco24I GRGCYC 2 cut(s) 2548, 3095
Eco31I GGTCTC 2 cut(s) 900, 1664
Eco47I GGWCC 2 cut(s) 1265, 3032
Eco53kI GAGCTC 1 cut(s) 2546
Eco57I CTGAAG 4 cut(s) 672, 1590, 2778, 2822
Eco81I CCTNAGG 2 cut(s) 1410, 1940
Eco88I CYCGRG 1 cut(s) 1071
EcoICRI GAGCTC 1 cut(s) 2546
EcoO109I RGGNCCY 1 cut(s) 1265
EcoRI GAATTC 1 cut(s) 587
EcoRII CCWGG 4 cut(s) 716, 778, 1463, 2958
EcoT14I CCWWGG 3 cut(s) 825, 2184, 2342
EcoT22I ATGCAT 1 cut(s) 2665
EcoT38I GRGCYC 2 cut(s) 2548, 3095
ErhI CCWWGG 3 cut(s) 825, 2184, 2342
Esp3I CGTCTC 1 cut(s) 1251
FalI AAGNNNNNCTT 2 cut(s) 2244, 2276
FaqI GGGAC 2 cut(s) 1192, 1921
FauI CCCGC 4 cut(s) 531, 840, 3016, 3077
FauNDI CATATG 1 cut(s) 3097
FbaI TGATCA 2 cut(s) 373, 1003
FblI GTMKAC 2 cut(s) 346, 1147
FriOI GRGCYC 2 cut(s) 2548, 3095
FspBI CTAG 4 cut(s) 1040, 1787, 2328, 2586
GlaI GCGC 1 cut(s) 2943
GsaI CCCAGC 1 cut(s) 549
GsuI CTGGAG 2 cut(s) 245, 739
HaeII RGCGCY 1 cut(s) 2945
HaeIII GGCC 2 cut(s) 2699, 2823
HapII CCGG 3 cut(s) 134, 957, 3008
HgaI GACGC 5 cut(s) 736, 1268, 2175, 2657, 3075
HhaI GCGC 1 cut(s) 2944
Hin1I GRCGYC 1 cut(s) 747
Hin6I GCGC 1 cut(s) 2942
HinP1I GCGC 1 cut(s) 2942
HincII GTYRAC 4 cut(s) 1242, 1842, 2487, 3013
HindII GTYRAC 4 cut(s) 1242, 1842, 2487, 3013
HindIII AAGCTT 1 cut(s) 3038
HpaI GTTAAC 2 cut(s) 1242, 3013
HpaII CCGG 3 cut(s) 134, 957, 3008
HphI GGTGA 2 cut(s) 596, 1706
Hpy99I CGWCG 1 cut(s) 3091
HpyAV CCTTC 9 cut(s) 436, 696, 699, 812, 1563, 1976, 2253, 2846, 2955
HpyCH4IV ACGT 1 cut(s) 397
HpyF10VI GCNNNNNNNGC 7 cut(s) 68, 821, 830, 1799, 1901, 2246, 2255
HpySE526I ACGT 1 cut(s) 397
Hsp92I GRCGYC 1 cut(s) 747
HspAI GCGC 1 cut(s) 2942
Kpn2I TCCGGA 2 cut(s) 133, 956
Ksp22I TGATCA 2 cut(s) 373, 1003
KspAI GTTAAC 2 cut(s) 1242, 3013
LmnI GCTCC 8 cut(s) 226, 1543, 1909, 2130, 2245, 2543, 2551, 2611
LweI GCATC 5 cut(s) 398, 1006, 2368, 2672, 2983
MaeI CTAG 4 cut(s) 1040, 1787, 2328, 2586
MaeII ACGT 1 cut(s) 397
MaeIII GTNAC 6 cut(s) 95, 236, 1708, 2310, 2388, 2502
MfeI CAATTG 1 cut(s) 2031
MflI RGATCY 2 cut(s) 2171, 2680
MhlI GDGCHC 5 cut(s) 1477, 1990, 2548, 2558, 3095
MlsI TGGCCA 1 cut(s) 2823
MluNI TGGCCA 1 cut(s) 2823
MlyI GAGTC 2 cut(s) 2086, 2297
Mox20I TGGCCA 1 cut(s) 2823
Mph1103I ATGCAT 1 cut(s) 2665
MroI TCCGGA 2 cut(s) 133, 956
MroXI GAANNNNTTC 1 cut(s) 2835
MscI TGGCCA 1 cut(s) 2823
MslI CAYNNNNRTG 5 cut(s) 527, 1011, 2444, 2450, 2813
Msp20I TGGCCA 1 cut(s) 2823
MspA1I CMGCKG 2 cut(s) 545, 1610
MspI CCGG 3 cut(s) 134, 957, 3008
MspR9I CCNGG 4 cut(s) 718, 780, 1465, 2960
MunI CAATTG 1 cut(s) 2031
MvaI CCWGG 4 cut(s) 718, 780, 1465, 2960
MwoI GCNNNNNNNGC 7 cut(s) 68, 821, 830, 1799, 1901, 2246, 2255
NdeI CATATG 1 cut(s) 3097
NlaIV GGNNCC 1 cut(s) 1199
NmeAIII GCCGAG 2 cut(s) 139, 2189
NmuCI GTSAC 1 cut(s) 2388
NsiI ATGCAT 1 cut(s) 2665
NspI RCATGY 2 cut(s) 1306, 2535
PacI TTAATTAA 1 cut(s) 993
PaeR7I CTCGAG 1 cut(s) 1071
PagI TCATGA 1 cut(s) 1666
PciI ACATGT 2 cut(s) 1302, 2531
PcsI WCGNNNNNNNCGW 1 cut(s) 2216
PdmI GAANNNNTTC 1 cut(s) 2835
PflFI GACNNNGTC 1 cut(s) 1933
PfoI TCCNGGA 1 cut(s) 716
PleI GAGTC 2 cut(s) 2086, 2297
PpsI GAGTC 2 cut(s) 2086, 2297
Ppu21I YACGTR 1 cut(s) 398
PpuMI RGGWCCY 1 cut(s) 1265
PscI ACATGT 2 cut(s) 1302, 2531
PshAI GACNNNNGTC 1 cut(s) 1263
Psp124BI GAGCTC 1 cut(s) 2548
Psp5II RGGWCCY 1 cut(s) 1265
Psp6I CCWGG 4 cut(s) 716, 778, 1463, 2958
PspFI CCCAGC 1 cut(s) 545
PspGI CCWGG 4 cut(s) 716, 778, 1463, 2958
PspN4I GGNNCC 1 cut(s) 1199
PspPI GGNCC 2 cut(s) 1265, 3032
PspPPI RGGWCCY 1 cut(s) 1265
PstNI CAGNNNCTG 2 cut(s) 1268, 2609
PsuI RGATCY 2 cut(s) 2171, 2680
PsyI GACNNNGTC 1 cut(s) 1933
PvuII CAGCTG 2 cut(s) 545, 1610
RsaI GTAC 4 cut(s) 451, 843, 1354, 2222
RsaNI GTAC 4 cut(s) 450, 842, 1353, 2221
RseI CAYNNNNRTG 5 cut(s) 527, 1011, 2444, 2450, 2813
SacI GAGCTC 1 cut(s) 2548
Sau96I GGNCC 2 cut(s) 1265, 3032
SchI GAGTC 2 cut(s) 2086, 2297
ScrFI CCNGG 4 cut(s) 718, 780, 1465, 2960
SduI GDGCHC 5 cut(s) 1477, 1990, 2548, 2558, 3095
SfaNI GCATC 5 cut(s) 398, 1006, 2368, 2672, 2983
SfcI CTRYAG 3 cut(s) 292, 1858, 2044
Sfr274I CTCGAG 1 cut(s) 1071
SinI GGWCC 2 cut(s) 1265, 3032
SlaI CTCGAG 1 cut(s) 1071
SmiMI CAYNNNNRTG 5 cut(s) 527, 1011, 2444, 2450, 2813
SmlI CTYRAG 5 cut(s) 13, 247, 501, 1071, 1579
SmoI CTYRAG 5 cut(s) 13, 247, 501, 1071, 1579
SnaBI TACGTA 1 cut(s) 398
SsiI CCGC 8 cut(s) 154, 538, 847, 1138, 1784, 2700, 3023, 3070
SspI AATATT 1 cut(s) 1312
SspMI CTAG 4 cut(s) 1040, 1787, 2328, 2586
SstI GAGCTC 1 cut(s) 2548
StyD4I CCNGG 4 cut(s) 716, 778, 1463, 2958
StyI CCWWGG 3 cut(s) 825, 2184, 2342
TaiI ACGT 1 cut(s) 400
TaqI TCGA 8 cut(s) 423, 1072, 1210, 1721, 1928, 2195, 2577, 3089
TaqII GACCGA 1 cut(s) 2595
TauI GCSGC 1 cut(s) 2702
TscAI CASTG 2 cut(s) 1224, 2466
TseFI GTSAC 1 cut(s) 2388
Tsp45I GTSAC 1 cut(s) 2388
TspGWI ACGGA 3 cut(s) 188, 2538, 2573
TspRI CASTG 2 cut(s) 1224, 2466
Tth111I GACNNNGTC 1 cut(s) 1933
VneI GTGCAC 1 cut(s) 1473
VpaK11BI GGWCC 2 cut(s) 1265, 3032
XapI RAATTY 9 cut(s) 363, 532, 587, 608, 661, 952, 1171, 1205, 1745
XceI RCATGY 2 cut(s) 1306, 2535
XhoI CTCGAG 1 cut(s) 1071
XmiI GTMKAC 2 cut(s) 346, 1147
XmnI GAANNNNTTC 1 cut(s) 2835
XspI CTAG 4 cut(s) 1040, 1787, 2328, 2586
Zsp2I ATGCAT 1 cut(s) 2665
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.