RLG00000030634

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0008987
Physical Location & Seq
Reverse (-)
64718808 .. 64731211
12404 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030634

Sequence Viewer

Length: 3132 bp
ATGGGGATGATCTCAAGGCAAGTTTTCCCTGTTTGTGAAAGCCTCTGCTTCTTTTGTCCTGCATTGCGTGCCAGATCACGCCATCCCGTCAAGCGTTACAAGAAGTTGCTCGCCGAGATTTTTCCTCGCTCTCCGGATGAAGAACCAAATGACCGCAAGATCAGTAAACTATGTGAATATGCCTCAAAAACTCCTCTCCGTATTCCAAAGATCACATCTACTCTGGAGCAAAGATGTTACAAGGACTTGAGAACTGAGAACTTCCACTCTGTGAAAGTGGTCATGTGTATCTACCGGAAGTTGTTGATTTCTTGTAAGGATCAAATGCCATTGTTTGCAAGTAGTCTACTTAGCATTGCTCAAATTCTGCTTGATCAAACACGACATGATGAAATACGTATTTTAGGATGCCAAACTCTTTTCGACTTTGTGAATAATCAGAAGGATGGTACATATATGTTTAACTTAGACAGCATGATTCCAAAACTTTGTCAAATAGCTCAAGAAATGAGGGAGGATGGCACAGCAATGAATTTGCGGGCAGCTGGGCTTCAAGTTCTTTCATCAATGGTTTGGTTCATGGGTGAATTCTCTCACATTTCAACAGAATTTGACAATGTTGTTTCAGTTGTCTTGGAAAATTATGGAGGTGTAAAGAAAAATTCAGAACAAGAAGAAGTTTCTCCTTCAGTAGAACCCATGAGAAGGATTCCATCCTGGAGGTTGATAGTGAGTGAAAAAGGAGGCGTCAATGACTTGGGGGAGGATATGCACAACCCTGGATTTTGGTCAAGGGTTTGCCTTCATAACATTGCCAAGTTAGCCAAGGAAGCTACAACTGTACGGCGGGTTTTGGAATCTTTGTTCAGATATTTTGATAATGGCAATCTTTGGTCTCCTAAACATGGGCTTGCTCTGTCTGTCTTGATGAATATGCAGTTAATAATTGAAAATTCTGGACAGAACAGGCATTTCATTTTGTCCATCTTAATTAAGCATCTTGATCACAAGAATGTTCTTAAAAACCCAAATATGCAGCTAGACATTGTTGATGTTGCTACCTCGCTTGCTCGAGAAACAAAGGTTCAATCATCAGTTGCTATAATTGGCGCATTGAGTGATATGATGAGACATTTGCGGAAAAGTATACATTGCTCACTTGATGATTCAAATTTGGGGACAGAAGTTATTGAATGGAACCGAAAATTTCGAGCAGCAGTGGATGACTGCCTTGTTGAGTTAACACATAAGGTAGGAGACGCAGGTCCTGTTCTTGACATGATGGCTGTGATGTTAGAAAACATGTCAAATATTACTGTTATGGCGAGAACCTCAATTTCTGCTGTTTACCGTACTGGTCAAATTGTGGCAACAATACCTGATTTGTCATATAAAAACAAGACTTTTCCTGAGGCATTATTTCATCAATTACTAGTAGCTATGGTCTGTGCTGACCATGAAACCAGGGTCGGTGCACACCGTATTTTGTCTGTTGTTCTTGTTCCATCTTCTGTTTGCCCCCGTCCTCTTGCTGCTGCTCCCCACACTTCAAAGAAAAGTCCTATTGGAAGGACACTCTCAAGAACTGTATCTGTGTTTTCTTCTTCAGCTGCTCTCTTTGAGAAATTAAAGAAGGAGCCATCTCACTCGCAAGAAAACATTAGTCATGAGACCAAGAACAATGCTGTCTTTGGTGAAGAAGCAAAGGTTACTAACGGCTCGATGTTGCACAGATTGAAATCCAAATTCAGTTCAAAAAGACACGCAGCAGCTTCAAATGAACCGCTAGGTGCTGAGGAAGCTACACACAACAACCATCCTACAATGCACAGATTGAAGTCAACTTTAAGCCGAAACTACAGTATGAAAAGGCAACCATCAACTATGACTGCTGCTACAACAGCTCCAAGTGTTCCACATAATGAATCGACAATGTCCCTTAGGTTAAGCAGTCGCCAGATTACCCTTCTGCTTTCATCTATCTGGGCACAGTCTATCTCCCCTTTAAATACGCCTGAAAACTATCAAGCAATTGCTCATACCTACAGCCTTGTGTTGCTATATGCTCGGACTAAGACCACATCCCATGAGACTCTGATCCGAAGTTTTCAGTTAGCATTTTCATTAAGGAGCATTTCTCTTGGAGGAGGGTTGCAGCCGTCAAGACGCAGATCTCTCTTTACCTTGGCAACATCGATGATTATCTTCTCGGCTAATGCGTACAACATTGTTGCCCTTGCTCCTTCTGCTAAAGCAGCACTTACAAATGAAACAGTTGATCCATTTCTACGGTTAGTTGATGACTCCAAGTTACAGGCTGTTGAATCTAGCCCTGACCAACCAAGGAAAGTTTATGGATCAAAAGAAGATGATGAAGATGCTTTAAGGTCACTTTCGGGTTTAGAAAAAGCTGATAATACTCACACTAAGGAATCATTCACTACCATGATAGTGAAGACAGTGGCAAAGTCCTCAGATGAATTGTCAACTATGAGGCAGCAGTTACTTACCGATTTTCTTCCTGATGATACATGTCCATTGGGAGCTCCGTTGAGCACGGAGACACCCATACAAATCGACCGATCTAGCTTACCAGATAATGCAGCTCCTGATAGTACTGTTGAGCCTCCAATGTTCATAATTGATGATGACGCTTTACCCAATGCATCTGAAAGTCAAACAGATCCCAACACAAAATTGGCCGCAGAAAGTCTGAGCCTCATTAGTGTCAATGAGCTTTTAGATTCGGTTGTGGAGACAACACACCAAGTAGGAAGAATGTCAGTCTCAACTGCTTCAGATATGCCTTACATGGAAATGGCTGGCCAATGTGAAGCCCTTCAGATGGGGAAGCAGCAGAAGATGTCTTCTTTCATGGTTGCCCAACAAAGGCAAGAAAGTTTGATTAGATTTTCTGCTCAGGATTCCAATGTAGTAAACGAAGCGCCTTCTTCGGTTGTCCTGGGTGTTCCTACGAGTGGCAATCCATTCCTTGATGCAAATGCTGTTCCGGTTAACCAACCTGGGGGCAATGGTCCGAAGCTTTGTGCAACTGAATCCCAACATTATCCCCGCTTTCAGCTACCTGCGTCGAGCCCATATGATAACTTTTTAAAGGCTGCTGGTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1044

Amino Acids

115.53

Weight (kDa)

7.82

Isoelectric Point (pI)

51.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EFR3_ARM PF21052 65 - 159 6.4e-17 EFR3, armadillo repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1253, 3094
AccI GTMKAC 2 cut(s) 346, 1147
AccIII TCCGGA 1 cut(s) 133
AciI CCGC 7 cut(s) 154, 538, 847, 1138, 1784, 2703, 3073
AclWI GGATC 5 cut(s) 327, 2092, 2273, 2365, 2678
AcoI YGGCCR 2 cut(s) 2700, 2824
AcsI RAATTY 9 cut(s) 363, 532, 587, 608, 661, 952, 1171, 1205, 1745
AcuI CTGAAG 4 cut(s) 672, 1590, 2781, 2825
AcyI GRCGYC 1 cut(s) 747
AdeI CACNNNGTG 1 cut(s) 271
AfaI GTAC 5 cut(s) 451, 843, 1354, 2222, 2617
AfiI CCNNNNNNNGG 6 cut(s) 705, 905, 2845, 2889, 2978, 3025
AflIII ACRYGT 2 cut(s) 1302, 2531
AhlI ACTAGT 1 cut(s) 1432
AjnI CCWGG 5 cut(s) 716, 778, 1463, 2961, 3022
AloI GAACNNNNNNTCC 2 cut(s) 848, 880
Alw21I GWGCWC 3 cut(s) 1477, 2548, 2558
Alw26I GTCTC 8 cut(s) 900, 1123, 1251, 1664, 2084, 2555, 2750, 2791
Alw44I GTGCAC 1 cut(s) 1473
AlwI GGATC 5 cut(s) 327, 2092, 2273, 2365, 2678
AlwNI CAGNNNCTG 2 cut(s) 1268, 2609
Ama87I CYCGRG 1 cut(s) 1071
Aor13HI TCCGGA 1 cut(s) 133
AoxI GGCC 2 cut(s) 2700, 2824
ApaLI GTGCAC 1 cut(s) 1473
ApoI RAATTY 9 cut(s) 363, 532, 587, 608, 661, 952, 1171, 1205, 1745
Asp700I GAANNNNTTC 1 cut(s) 2838
AspLEI GCGC 2 cut(s) 1112, 2947
AspS9I GGNCC 2 cut(s) 1265, 3035
AsuHPI GGTGA 2 cut(s) 596, 1706
AvaI CYCGRG 1 cut(s) 1071
AvaII GGWCC 2 cut(s) 1265, 3035
AxyI CCTNAGG 2 cut(s) 1410, 1940
BaeGI GKGCMC 2 cut(s) 1477, 1990
BalI TGGCCA 1 cut(s) 2826
BanII GRGCYC 2 cut(s) 2548, 3098
BbsI GAAGAC 2 cut(s) 2462, 2859
Bbv12I GWGCWC 3 cut(s) 1477, 2548, 2558
BbvCI CCTCAGC 1 cut(s) 1794
BceAI ACGGC 3 cut(s) 860, 1732, 2143
BciT130I CCWGG 5 cut(s) 718, 780, 1465, 2963, 3024
BclI TGATCA 2 cut(s) 373, 1003
BcoDI GTCTC 8 cut(s) 900, 1123, 1251, 1664, 2084, 2555, 2750, 2791
BcuI ACTAGT 1 cut(s) 1432
BfaI CTAG 5 cut(s) 1040, 1433, 1787, 2328, 2586
BfmI CTRYAG 2 cut(s) 1858, 2044
BfoI RGCGCY 1 cut(s) 2948
BfuAI ACCTGC 2 cut(s) 1253, 3094
BglII AGATCT 1 cut(s) 2171
BmcAI AGTACT 1 cut(s) 2617
Bme1390I CCNGG 5 cut(s) 718, 780, 1465, 2963, 3024
Bme18I GGWCC 2 cut(s) 1265, 3035
BmeT110I CYCGRG 1 cut(s) 1071
BmgT120I GGNCC 2 cut(s) 1265, 3035
BmiI GGNNCC 2 cut(s) 1199, 1638
BmrFI CCNGG 5 cut(s) 718, 780, 1465, 2963, 3024
BmsI GCATC 5 cut(s) 398, 1006, 2368, 2675, 2986
BoxI GACNNNNGTC 1 cut(s) 1263
BpiI GAAGAC 2 cut(s) 2462, 2859
BplI GAGNNNNNCTC 2 cut(s) 2122, 2154
BpmI CTGGAG 2 cut(s) 245, 739
Bpu10I CCTNAGC 2 cut(s) 1794, 2919
BpuEI CTTGAG 3 cut(s) 268, 486, 1564
Bsa29I ATCGAT 1 cut(s) 2195
BsaAI YACGTR 1 cut(s) 398
BsaBI GATNNNNATC 2 cut(s) 1738, 2201
BsaHI GRCGYC 1 cut(s) 747
BsaI GGTCTC 2 cut(s) 900, 1664
BsaJI CCNNGG 7 cut(s) 778, 825, 1464, 2184, 2342, 2962, 3023
BsaWI WCCGGW 3 cut(s) 133, 294, 3010
BsaXI ACNNNNNCTCC 2 cut(s) 1888, 1918
Bsc4I CCNNNNNNNGG 6 cut(s) 705, 905, 2845, 2889, 2978, 3025
Bse1I ACTGG 1 cut(s) 1360
Bse21I CCTNAGG 2 cut(s) 1410, 1940
Bse3DI GCAATG 6 cut(s) 62, 354, 534, 810, 1150, 3037
Bse8I GATNNNNATC 2 cut(s) 1738, 2201
BseAI TCCGGA 1 cut(s) 133
BseBI CCWGG 5 cut(s) 718, 780, 1465, 2963, 3024
BseCI ATCGAT 1 cut(s) 2195
BseDI CCNNGG 7 cut(s) 778, 825, 1464, 2184, 2342, 2962, 3023
BseJI GATNNNNATC 2 cut(s) 1738, 2201
BseLI CCNNNNNNNGG 6 cut(s) 705, 905, 2845, 2889, 2978, 3025
BseMI GCAATG 6 cut(s) 62, 354, 534, 810, 1150, 3037
BseMII CTCAG 6 cut(s) 246, 1401, 1785, 2487, 2705, 2933
BseNI ACTGG 1 cut(s) 1360
BseRI GAGGAG 2 cut(s) 183, 2160
BseSI GKGCMC 2 cut(s) 1477, 1990
BseYI CCCAGC 1 cut(s) 545
Bsh1285I CGRYCG 1 cut(s) 2581
BshFI GGCC 2 cut(s) 2702, 2826
BshVI ATCGAT 1 cut(s) 2195
BsiEI CGRYCG 1 cut(s) 2581
BsiHKAI GWGCWC 3 cut(s) 1477, 2548, 2558
BsiHKCI CYCGRG 1 cut(s) 1071
BsiSI CCGG 3 cut(s) 134, 295, 3011
BslFI GGGAC 2 cut(s) 1192, 1921
BslI CCNNNNNNNGG 6 cut(s) 705, 905, 2845, 2889, 2978, 3025
BsmAI GTCTC 8 cut(s) 900, 1123, 1251, 1664, 2084, 2555, 2750, 2791
BsmBI CGTCTC 1 cut(s) 1251
BsmFI GGGAC 2 cut(s) 1192, 1921
BsnI GGCC 2 cut(s) 2702, 2826
Bso31I GGTCTC 2 cut(s) 900, 1664
BsoBI CYCGRG 1 cut(s) 1071
Bsp1286I GDGCHC 5 cut(s) 1477, 1990, 2548, 2558, 3098
Bsp13I TCCGGA 1 cut(s) 133
BspACI CCGC 7 cut(s) 154, 538, 847, 1138, 1784, 2703, 3073
BspANI GGCC 2 cut(s) 2702, 2826
BspCNI CTCAG 6 cut(s) 247, 1402, 1786, 2486, 2706, 2932
BspDI ATCGAT 1 cut(s) 2195
BspEI TCCGGA 1 cut(s) 133
BspHI TCATGA 1 cut(s) 1666
BspLI GGNNCC 2 cut(s) 1199, 1638
BspMI ACCTGC 2 cut(s) 1253, 3094
BspPI GGATC 5 cut(s) 327, 2092, 2273, 2365, 2678
BspTNI GGTCTC 2 cut(s) 900, 1664
BsrDI GCAATG 6 cut(s) 62, 354, 534, 810, 1150, 3037
BsrI ACTGG 1 cut(s) 1360
BssECI CCNNGG 7 cut(s) 778, 825, 1464, 2184, 2342, 2962, 3023
BssNAI GTATAC 1 cut(s) 1148
BssNI GRCGYC 1 cut(s) 747
BssT1I CCWWGG 3 cut(s) 825, 2184, 2342
Bst1107I GTATAC 1 cut(s) 1148
Bst2UI CCWGG 5 cut(s) 718, 780, 1465, 2963, 3024
BstACI GRCGYC 1 cut(s) 747
BstAPI GCANNNNNTGC 1 cut(s) 68
BstBAI YACGTR 1 cut(s) 398
BstC8I GCNNGC 6 cut(s) 69, 111, 540, 912, 1068, 2824
BstH2I RGCGCY 1 cut(s) 2948
BstHHI GCGC 2 cut(s) 1112, 2947
BstMAI GTCTC 8 cut(s) 900, 1123, 1251, 1664, 2084, 2555, 2750, 2791
BstMCI CGRYCG 1 cut(s) 2581
BstMWI GCNNNNNNNGC 7 cut(s) 68, 821, 830, 1799, 1901, 2246, 2255
BstNI CCWGG 5 cut(s) 718, 780, 1465, 2963, 3024
BstNSI RCATGY 2 cut(s) 1306, 2535
BstPAI GACNNNNGTC 1 cut(s) 1263
BstSCI CCNGG 5 cut(s) 716, 778, 1463, 2961, 3022
BstSFI CTRYAG 2 cut(s) 1858, 2044
BstSLI GKGCMC 2 cut(s) 1477, 1990
BstSNI TACGTA 1 cut(s) 398
BstV2I GAAGAC 2 cut(s) 2462, 2859
BstX2I RGATCY 2 cut(s) 2171, 2683
BstYI RGATCY 2 cut(s) 2171, 2683
BstZ17I GTATAC 1 cut(s) 1148
Bsu15I ATCGAT 1 cut(s) 2195
Bsu36I CCTNAGG 2 cut(s) 1410, 1940
BsuRI GGCC 2 cut(s) 2702, 2826
BsuTUI ATCGAT 1 cut(s) 2195
BtsI GCAGTG 1 cut(s) 1224
BtsIMutI CAGTG 2 cut(s) 1224, 2466
BveI ACCTGC 2 cut(s) 1253, 3094
Cac8I GCNNGC 6 cut(s) 69, 111, 540, 912, 1068, 2824
CaiI CAGNNNCTG 2 cut(s) 1268, 2609
CciI TCATGA 1 cut(s) 1666
CfoI GCGC 2 cut(s) 1112, 2947
Cfr13I GGNCC 2 cut(s) 1265, 3035
ClaI ATCGAT 1 cut(s) 2195
CseI GACGC 5 cut(s) 736, 1268, 2175, 2660, 3078
Csp6I GTAC 5 cut(s) 450, 842, 1353, 2221, 2616
CviQI GTAC 5 cut(s) 450, 842, 1353, 2221, 2616
DraI TTTAAA 2 cut(s) 2007, 3114
DraIII CACNNNGTG 1 cut(s) 271
EaeI YGGCCR 2 cut(s) 2700, 2824
Ecl136II GAGCTC 1 cut(s) 2546
Eco105I TACGTA 1 cut(s) 398
Eco130I CCWWGG 3 cut(s) 825, 2184, 2342
Eco24I GRGCYC 2 cut(s) 2548, 3098
Eco31I GGTCTC 2 cut(s) 900, 1664
Eco47I GGWCC 2 cut(s) 1265, 3035
Eco53kI GAGCTC 1 cut(s) 2546
Eco57I CTGAAG 4 cut(s) 672, 1590, 2781, 2825
Eco81I CCTNAGG 2 cut(s) 1410, 1940
Eco88I CYCGRG 1 cut(s) 1071
EcoICRI GAGCTC 1 cut(s) 2546
EcoO109I RGGNCCY 1 cut(s) 1265
EcoRI GAATTC 1 cut(s) 587
EcoRII CCWGG 5 cut(s) 716, 778, 1463, 2961, 3022
EcoT14I CCWWGG 3 cut(s) 825, 2184, 2342
EcoT22I ATGCAT 1 cut(s) 2668
EcoT38I GRGCYC 2 cut(s) 2548, 3098
ErhI CCWWGG 3 cut(s) 825, 2184, 2342
Esp3I CGTCTC 1 cut(s) 1251
FalI AAGNNNNNCTT 2 cut(s) 2244, 2276
FaqI GGGAC 2 cut(s) 1192, 1921
FauI CCCGC 3 cut(s) 531, 840, 3080
FauNDI CATATG 1 cut(s) 3100
FbaI TGATCA 2 cut(s) 373, 1003
FblI GTMKAC 2 cut(s) 346, 1147
FriOI GRGCYC 2 cut(s) 2548, 3098
FspBI CTAG 5 cut(s) 1040, 1433, 1787, 2328, 2586
GlaI GCGC 2 cut(s) 1111, 2946
GsaI CCCAGC 1 cut(s) 549
GsuI CTGGAG 2 cut(s) 245, 739
HaeII RGCGCY 1 cut(s) 2948
HaeIII GGCC 2 cut(s) 2702, 2826
HapII CCGG 3 cut(s) 134, 295, 3011
HgaI GACGC 5 cut(s) 736, 1268, 2175, 2660, 3078
HhaI GCGC 2 cut(s) 1112, 2947
Hin1I GRCGYC 1 cut(s) 747
Hin6I GCGC 2 cut(s) 1110, 2945
HinP1I GCGC 2 cut(s) 1110, 2945
HincII GTYRAC 4 cut(s) 1242, 1842, 2487, 3016
HindII GTYRAC 4 cut(s) 1242, 1842, 2487, 3016
HindIII AAGCTT 1 cut(s) 3041
HpaI GTTAAC 2 cut(s) 1242, 3016
HpaII CCGG 3 cut(s) 134, 295, 3011
HphI GGTGA 2 cut(s) 596, 1706
Hpy99I CGWCG 1 cut(s) 3094
HpyCH4IV ACGT 1 cut(s) 397
HpyF10VI GCNNNNNNNGC 7 cut(s) 68, 821, 830, 1799, 1901, 2246, 2255
HpySE526I ACGT 1 cut(s) 397
Hsp92I GRCGYC 1 cut(s) 747
HspAI GCGC 2 cut(s) 1110, 2945
Kpn2I TCCGGA 1 cut(s) 133
Ksp22I TGATCA 2 cut(s) 373, 1003
KspAI GTTAAC 2 cut(s) 1242, 3016
LmnI GCTCC 9 cut(s) 226, 1543, 1636, 1909, 2130, 2245, 2543, 2551, 2611
LweI GCATC 5 cut(s) 398, 1006, 2368, 2675, 2986
MaeI CTAG 5 cut(s) 1040, 1433, 1787, 2328, 2586
MaeII ACGT 1 cut(s) 397
MaeIII GTNAC 6 cut(s) 95, 236, 1708, 2310, 2388, 2502
MfeI CAATTG 1 cut(s) 2031
MflI RGATCY 2 cut(s) 2171, 2683
MhlI GDGCHC 5 cut(s) 1477, 1990, 2548, 2558, 3098
MlsI TGGCCA 1 cut(s) 2826
MluNI TGGCCA 1 cut(s) 2826
MlyI GAGTC 2 cut(s) 2086, 2297
Mox20I TGGCCA 1 cut(s) 2826
Mph1103I ATGCAT 1 cut(s) 2668
MroI TCCGGA 1 cut(s) 133
MroXI GAANNNNTTC 1 cut(s) 2838
MscI TGGCCA 1 cut(s) 2826
MslI CAYNNNNRTG 5 cut(s) 527, 1011, 2444, 2450, 2816
Msp20I TGGCCA 1 cut(s) 2826
MspA1I CMGCKG 2 cut(s) 545, 1610
MspI CCGG 3 cut(s) 134, 295, 3011
MspR9I CCNGG 5 cut(s) 718, 780, 1465, 2963, 3024
MunI CAATTG 1 cut(s) 2031
MvaI CCWGG 5 cut(s) 718, 780, 1465, 2963, 3024
MwoI GCNNNNNNNGC 7 cut(s) 68, 821, 830, 1799, 1901, 2246, 2255
NdeI CATATG 1 cut(s) 3100
NlaIV GGNNCC 2 cut(s) 1199, 1638
NmeAIII GCCGAG 2 cut(s) 139, 2189
NmuCI GTSAC 1 cut(s) 2388
NsiI ATGCAT 1 cut(s) 2668
NspI RCATGY 2 cut(s) 1306, 2535
PacI TTAATTAA 1 cut(s) 993
PaeR7I CTCGAG 1 cut(s) 1071
PagI TCATGA 1 cut(s) 1666
PciI ACATGT 2 cut(s) 1302, 2531
PcsI WCGNNNNNNNCGW 1 cut(s) 2216
PdmI GAANNNNTTC 1 cut(s) 2838
PflFI GACNNNGTC 1 cut(s) 1933
PfoI TCCNGGA 1 cut(s) 716
PleI GAGTC 2 cut(s) 2086, 2297
PpsI GAGTC 2 cut(s) 2086, 2297
Ppu21I YACGTR 1 cut(s) 398
PpuMI RGGWCCY 1 cut(s) 1265
PscI ACATGT 2 cut(s) 1302, 2531
PshAI GACNNNNGTC 1 cut(s) 1263
Psp124BI GAGCTC 1 cut(s) 2548
Psp5II RGGWCCY 1 cut(s) 1265
Psp6I CCWGG 5 cut(s) 716, 778, 1463, 2961, 3022
PspFI CCCAGC 1 cut(s) 545
PspGI CCWGG 5 cut(s) 716, 778, 1463, 2961, 3022
PspN4I GGNNCC 2 cut(s) 1199, 1638
PspPI GGNCC 2 cut(s) 1265, 3035
PspPPI RGGWCCY 1 cut(s) 1265
PstNI CAGNNNCTG 2 cut(s) 1268, 2609
PsuI RGATCY 2 cut(s) 2171, 2683
PsyI GACNNNGTC 1 cut(s) 1933
PvuII CAGCTG 2 cut(s) 545, 1610
RsaI GTAC 5 cut(s) 451, 843, 1354, 2222, 2617
RsaNI GTAC 5 cut(s) 450, 842, 1353, 2221, 2616
RseI CAYNNNNRTG 5 cut(s) 527, 1011, 2444, 2450, 2816
SacI GAGCTC 1 cut(s) 2548
Sau96I GGNCC 2 cut(s) 1265, 3035
ScaI AGTACT 1 cut(s) 2617
SchI GAGTC 2 cut(s) 2086, 2297
ScrFI CCNGG 5 cut(s) 718, 780, 1465, 2963, 3024
SduI GDGCHC 5 cut(s) 1477, 1990, 2548, 2558, 3098
SfaNI GCATC 5 cut(s) 398, 1006, 2368, 2675, 2986
SfcI CTRYAG 2 cut(s) 1858, 2044
Sfr274I CTCGAG 1 cut(s) 1071
SinI GGWCC 2 cut(s) 1265, 3035
SlaI CTCGAG 1 cut(s) 1071
SmiMI CAYNNNNRTG 5 cut(s) 527, 1011, 2444, 2450, 2816
SmlI CTYRAG 5 cut(s) 13, 247, 501, 1071, 1579
SmoI CTYRAG 5 cut(s) 13, 247, 501, 1071, 1579
SnaBI TACGTA 1 cut(s) 398
SpeI ACTAGT 1 cut(s) 1432
SsiI CCGC 7 cut(s) 154, 538, 847, 1138, 1784, 2703, 3073
SspI AATATT 1 cut(s) 1312
SspMI CTAG 5 cut(s) 1040, 1433, 1787, 2328, 2586
SstI GAGCTC 1 cut(s) 2548
StyD4I CCNGG 5 cut(s) 716, 778, 1463, 2961, 3022
StyI CCWWGG 3 cut(s) 825, 2184, 2342
TaiI ACGT 1 cut(s) 400
TaqI TCGA 8 cut(s) 423, 1072, 1210, 1721, 1928, 2195, 2577, 3092
TaqII GACCGA 1 cut(s) 2595
TatI WGTACW 1 cut(s) 2615
TauI GCSGC 1 cut(s) 2705
TscAI CASTG 2 cut(s) 1224, 2466
TseFI GTSAC 1 cut(s) 2388
Tsp45I GTSAC 1 cut(s) 2388
TspGWI ACGGA 3 cut(s) 188, 2538, 2573
TspRI CASTG 2 cut(s) 1224, 2466
Tth111I GACNNNGTC 1 cut(s) 1933
VneI GTGCAC 1 cut(s) 1473
VpaK11BI GGWCC 2 cut(s) 1265, 3035
XapI RAATTY 9 cut(s) 363, 532, 587, 608, 661, 952, 1171, 1205, 1745
XceI RCATGY 2 cut(s) 1306, 2535
XcmI CCANNNNNNNNNTGG 1 cut(s) 2695
XhoI CTCGAG 1 cut(s) 1071
XmiI GTMKAC 2 cut(s) 346, 1147
XmnI GAANNNNTTC 1 cut(s) 2838
XspI CTAG 5 cut(s) 1040, 1433, 1787, 2328, 2586
ZrmI AGTACT 1 cut(s) 2617
Zsp2I ATGCAT 1 cut(s) 2668
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.