Rroxscaffold_4G00330750

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0008987
Physical Location & Seq
Reverse (-)
64450263 .. 64460158
9896 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00330750.1

Sequence Viewer

Length: 2940 bp
ATGGGGATGATCTCAAGGCAAGTTTTCCCTGTTTGTGAAAGCCTCTGCTTCTTTTGTCCTGCATTGCGTGCCAGATCACGCCATCCCGTCAAGCGTTACAAGAAGTTGCTCGCCGAGATTTTTCCTCGCTCTCCGGATGAAGAACCAAATGACCGCAAGATCAGTAAACTATGTGAATATGCCTCAAAAACTCCTCTCCGTATTCCAAAGGTCTTATTTTACCTTTCATTCGTGTATTCTTCTCTTGCATTGATAGAAGTTCATATATTTCAGATCACATCTACTCTGGAGCAAAGATGTTACAAGGACTTGAGAACTGAGAACTTCCACTCTGTGAAAGTGGTCATGTGTATCTACCGGAAGTTGTTGATTTCTTGTAAGGATCAAATGCCATTGTTTGCAAGTAGTCTACTTAGCATTGCTCAAATTCTGCTTGATCAAACACGACATGATGAAATACGTATTTTAGGATGCCAAACTCTTTTCGACTTTGTGAATAATCAGAAGGATGGTACATATATGTTTAACTTAGACAGCATGATTCCAAAACTTTGTCAAATAGCTCAAGAAATGAGGGAGGATGGCACAGCAATGAATTTGCGGGCAGCTGGGCTTCAAGTTCTTTCATCAATGGTTTGGTTCATGGGTGAATTCTCTCACATTTCAACAGAATTTGACAATGTTGTTTCAGTTGTCTTGGAAAATTATGGAGGAGTAAAGAAAAATTCAGAACAAGAAGAAGTTTCTCCTTCAGTAGAACCCATGAGAAGGATTCCATCCTGGAGGTTGATAGTGAGTGAAAAAGGAGGCGTCAATGACTTGGGGGAGGATATGCACAACCCTGGATTTTGGTCAAGGGTTTGCCTTCATAACATTTCCAAGTTAGCCAAGGAAGCTACAACTGTACGGCGGGTTTTGGAATCTTTGTTCAGATATTTTGATAATGGCAATCTTTGGTCTCCTAAACATGGGCTTGCTCTGTCTGTCTTGATGAATATGCAGTTAATAATTGAAAATTCTGGACAGAACAGGCATTTCATTTTGTCCATCTTAATTAAGCATCTTGATCACAAGAATGTTCTTAAAAACCCAAATATGCAGCTAGACATTGTTGATGTTGCCACCTCGCTTGCTCGAGAAACAAAGGTTCAATCATCAGTTGCTATAATTGGTGCATTGAGTGATATGATGAGACATCTGCGGAAAAGTATACATTGCTCACTTGATGATTCAAATTTGGGGACAGAAGTTACTGAATGGAACCGAAAATTTCGAGCAGCAGTGGATGACTGCCTTGTTGAGTTAACACATAAGGTAGGAGACGCAGGTCCTGTTCTTGACATGATGGCTGTGATGTTAGAAAACATGTCAAATATTACTGTTATGGCGAGAACCTCAATTTCTGCTGTTTACCGTACTGGTCAAATTGTGGCAACAATACCTGATTTGTCATATAAAAACAAGGCAAGAACTTTTCCTGAGGCATTATTTCATCAATTACTCGTAGCTATGGTCTGTGCTGACCATGAAACCAGGGTCGGTGCACACCGTATTTTGTCTGTTGTTCTTGTTCCATCTTCTGTTTGCCCCCGTCCTCTTGCTGCTGCTCCCCACACTTCAAAGAAAAGTCCTATTGGAAGGACACTCTCAAGAACTGTATCTGTGTTTTCTTCTTCAGCTGCTCTCTTTGAGAAATTAAAGAAGGAGCCATCTCACTCGCAGGAAAACATTAGTCATGAGACCAAGAACAATGCTGTCTTTGGTGAAGGAGCAAAGGTTACTAACGGCTCGATGTTGCACAGATTGAAATCCAAATTCAGTTCAAAAAGACACGCGGCAGCTTCAAATGAGCCGCTAGGTGCTGAGGAAGCTACACACAACAACCATCCTACAATGCACAGATTGAAGTCAACTTTAAGCCGAAGCTACAGTATGAAAAGGCAACCATCAACTATGACTGCGGATACAACAGCTCCAAGTGTTCCACCTAATGAATCGACAATGTCCCTTAGGTTAAGCAGTCGCCAGATTACCCTTCTGCTTTCATCTATCTGGGCACAGTCCATCTCCCCTTTAAATACGCCTGAAAACTATCAAGCAATTGCTCATACCTACAGCCTTGTGTTGCTATATGCTCGGACTAAGAACACATCCCATGAGACTCTGATCCGAAGTTTTCAGTTAGCATTTTCATTAAGGAGCATTTCTCTTGGAGGAGGGTTGCAGCCGTCAAGACGCAGATCTCTCTTTACCTTGGCAACATCGATGATTATCTTCTCGGCTAATGCGTACAACATTGTTGCCCTTGCTCCTTCTGCTAAAGCAGCACTTACAAATGAAACAGTTGATCCATTTCTACGGTTAGTTGATGACTCCAAGTTACAGGCTGTTGAATCTAGCCCTGACCAACCAAGGAAAGTTTATGGATCAAAAGAAGATGATGAAGATGCTTTAAGGTCACTTTCGGGTTTAGAAAAAGCTGATAATACTCACACTAAGGAATCATTCGCTACCATGATAGTGAAGACAGTGGCAAAGTCCTCAGATGAATTGTCAACTATGAGGCAGCAGTTACTTACCGATTTTCTTCCTGATGATACATGTCCATTGGGAGCTCCGTTGAGCACGGAGACACCCATACAAATCGACCGTTCTCGCTTACCAGATAATGCAGCTCCTGATACTGTTGAGCCTCCAATGTTCATAATTGATGATGACGCTTTACCGAATGCACCTGAAAGTCAAACAGATCCTAACACAAAATTGGCCGCAGAAAATCTGAGCCTCATTAGTGTCAATGAGCTTTTAGATTCGGACCTGTATGGGCATTATCCTACACTGAGTGAAACCAAAAAGAAGGATCGCAGGAGAACTATGTTAGAATTTCTGGATTCTTCCATACCTTCGGATTCCTTCTTCGAATATGAACAGAGAATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

979

Amino Acids

109.53

Weight (kDa)

8.21

Isoelectric Point (pI)

49.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EFR3_ARM PF21052 91 - 180 3.4e-15 EFR3, armadillo repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1316
AccI GTMKAC 2 cut(s) 409, 1210
AccII CGCG 1 cut(s) 1835
AccIII TCCGGA 1 cut(s) 133
AciI CCGC 8 cut(s) 154, 601, 910, 1201, 1835, 1853, 1961, 2769
AclWI GGATC 6 cut(s) 390, 2161, 2342, 2434, 2744, 2868
AcoI YGGCCR 1 cut(s) 2766
AcuI CTGAAG 2 cut(s) 735, 1659
AcyI GRCGYC 1 cut(s) 810
AdeI CACNNNGTG 2 cut(s) 334, 2843
AfaI GTAC 4 cut(s) 514, 906, 1417, 2291
AfiI CCNNNNNNNGG 2 cut(s) 768, 968
AflIII ACRYGT 2 cut(s) 1365, 2600
AjnI CCWGG 3 cut(s) 779, 841, 1532
AloI GAACNNNNNNTCC 2 cut(s) 911, 943
Alw21I GWGCWC 3 cut(s) 1546, 2617, 2627
Alw26I GTCTC 6 cut(s) 963, 1186, 1314, 1733, 2153, 2624
Alw44I GTGCAC 1 cut(s) 1542
AlwI GGATC 6 cut(s) 390, 2161, 2342, 2434, 2744, 2868
AlwNI CAGNNNCTG 2 cut(s) 1331, 2678
Ama87I CYCGRG 1 cut(s) 1134
Aor13HI TCCGGA 1 cut(s) 133
AoxI GGCC 1 cut(s) 2766
ApaLI GTGCAC 1 cut(s) 1542
AspS9I GGNCC 2 cut(s) 1328, 2815
AsuHPI GGTGA 2 cut(s) 659, 1775
AsuII TTCGAA 1 cut(s) 2919
AvaI CYCGRG 1 cut(s) 1134
AvaII GGWCC 2 cut(s) 1328, 2815
AxyI CCTNAGG 2 cut(s) 1479, 2009
BaeGI GKGCMC 2 cut(s) 1546, 2059
BanII GRGCYC 1 cut(s) 2617
BbsI GAAGAC 1 cut(s) 2531
Bbv12I GWGCWC 3 cut(s) 1546, 2617, 2627
BbvCI CCTCAGC 1 cut(s) 1863
BceAI ACGGC 3 cut(s) 923, 1801, 2212
BciT130I CCWGG 3 cut(s) 781, 843, 1534
BciVI GTATCC 1 cut(s) 1957
BclI TGATCA 2 cut(s) 436, 1066
BcoDI GTCTC 6 cut(s) 963, 1186, 1314, 1733, 2153, 2624
BfaI CTAG 4 cut(s) 1103, 1856, 2397, 2938
BfmI CTRYAG 2 cut(s) 1927, 2113
BfuAI ACCTGC 1 cut(s) 1316
BfuI GTATCC 1 cut(s) 1957
BglII AGATCT 1 cut(s) 2240
Bme1390I CCNGG 3 cut(s) 781, 843, 1534
Bme18I GGWCC 2 cut(s) 1328, 2815
BmeT110I CYCGRG 1 cut(s) 1134
BmgT120I GGNCC 2 cut(s) 1328, 2815
BmiI GGNNCC 2 cut(s) 1262, 1707
BmrFI CCNGG 3 cut(s) 781, 843, 1534
BmsI GCATC 3 cut(s) 461, 1069, 2437
BoxI GACNNNNGTC 1 cut(s) 1326
BpiI GAAGAC 1 cut(s) 2531
BplI GAGNNNNNCTC 2 cut(s) 2191, 2223
BpmI CTGGAG 2 cut(s) 308, 802
Bpu10I CCTNAGC 1 cut(s) 1863
Bpu14I TTCGAA 1 cut(s) 2919
BpuEI CTTGAG 3 cut(s) 331, 549, 1633
Bsa29I ATCGAT 1 cut(s) 2264
BsaAI YACGTR 1 cut(s) 461
BsaBI GATNNNNATC 2 cut(s) 1807, 2270
BsaHI GRCGYC 1 cut(s) 810
BsaI GGTCTC 2 cut(s) 963, 1733
BsaJI CCNNGG 5 cut(s) 841, 888, 1533, 2253, 2411
BsaWI WCCGGW 2 cut(s) 133, 357
BsaXI ACNNNNNCTCC 4 cut(s) 1761, 1791, 1957, 1987
Bsc4I CCNNNNNNNGG 2 cut(s) 768, 968
Bse1I ACTGG 1 cut(s) 1423
Bse21I CCTNAGG 2 cut(s) 1479, 2009
Bse3DI GCAATG 4 cut(s) 62, 417, 597, 1213
Bse8I GATNNNNATC 2 cut(s) 1807, 2270
BseAI TCCGGA 1 cut(s) 133
BseBI CCWGG 3 cut(s) 781, 843, 1534
BseCI ATCGAT 1 cut(s) 2264
BseDI CCNNGG 5 cut(s) 841, 888, 1533, 2253, 2411
BseJI GATNNNNATC 2 cut(s) 1807, 2270
BseLI CCNNNNNNNGG 2 cut(s) 768, 968
BseMI GCAATG 4 cut(s) 62, 417, 597, 1213
BseMII CTCAG 6 cut(s) 309, 1470, 1854, 2556, 2771, 2831
BseNI ACTGG 1 cut(s) 1423
BseRI GAGGAG 3 cut(s) 183, 726, 2229
BseSI GKGCMC 2 cut(s) 1546, 2059
BseYI CCCAGC 1 cut(s) 608
Bsh1236I CGCG 1 cut(s) 1835
Bsh1285I CGRYCG 1 cut(s) 2650
BshFI GGCC 1 cut(s) 2768
BshVI ATCGAT 1 cut(s) 2264
BsiEI CGRYCG 1 cut(s) 2650
BsiHKAI GWGCWC 3 cut(s) 1546, 2617, 2627
BsiHKCI CYCGRG 1 cut(s) 1134
BsiSI CCGG 2 cut(s) 134, 358
BslFI GGGAC 2 cut(s) 1255, 1990
BslI CCNNNNNNNGG 2 cut(s) 768, 968
BsmAI GTCTC 6 cut(s) 963, 1186, 1314, 1733, 2153, 2624
BsmBI CGTCTC 1 cut(s) 1314
BsmFI GGGAC 2 cut(s) 1255, 1990
BsmI GAATGC 1 cut(s) 2734
BsnI GGCC 1 cut(s) 2768
Bso31I GGTCTC 2 cut(s) 963, 1733
BsoBI CYCGRG 1 cut(s) 1134
Bsp119I TTCGAA 1 cut(s) 2919
Bsp1286I GDGCHC 4 cut(s) 1546, 2059, 2617, 2627
Bsp13I TCCGGA 1 cut(s) 133
BspACI CCGC 8 cut(s) 154, 601, 910, 1201, 1835, 1853, 1961, 2769
BspANI GGCC 1 cut(s) 2768
BspCNI CTCAG 6 cut(s) 310, 1471, 1855, 2555, 2772, 2832
BspDI ATCGAT 1 cut(s) 2264
BspEI TCCGGA 1 cut(s) 133
BspFNI CGCG 1 cut(s) 1835
BspHI TCATGA 1 cut(s) 1735
BspLI GGNNCC 2 cut(s) 1262, 1707
BspMI ACCTGC 1 cut(s) 1316
BspPI GGATC 6 cut(s) 390, 2161, 2342, 2434, 2744, 2868
BspT104I TTCGAA 1 cut(s) 2919
BspTNI GGTCTC 2 cut(s) 963, 1733
BsrDI GCAATG 4 cut(s) 62, 417, 597, 1213
BsrI ACTGG 1 cut(s) 1423
BssECI CCNNGG 5 cut(s) 841, 888, 1533, 2253, 2411
BssNAI GTATAC 1 cut(s) 1211
BssNI GRCGYC 1 cut(s) 810
BssT1I CCWWGG 3 cut(s) 888, 2253, 2411
Bst1107I GTATAC 1 cut(s) 1211
Bst2UI CCWGG 3 cut(s) 781, 843, 1534
BstACI GRCGYC 1 cut(s) 810
BstAPI GCANNNNNTGC 1 cut(s) 68
BstBAI YACGTR 1 cut(s) 461
BstBI TTCGAA 1 cut(s) 2919
BstC8I GCNNGC 5 cut(s) 69, 111, 603, 975, 1131
BstFNI CGCG 1 cut(s) 1835
BstMAI GTCTC 6 cut(s) 963, 1186, 1314, 1733, 2153, 2624
BstMCI CGRYCG 1 cut(s) 2650
BstMWI GCNNNNNNNGC 5 cut(s) 68, 893, 1868, 2315, 2324
BstNI CCWGG 3 cut(s) 781, 843, 1534
BstNSI RCATGY 2 cut(s) 1369, 2604
BstPAI GACNNNNGTC 1 cut(s) 1326
BstSCI CCNGG 3 cut(s) 779, 841, 1532
BstSFI CTRYAG 2 cut(s) 1927, 2113
BstSLI GKGCMC 2 cut(s) 1546, 2059
BstSNI TACGTA 1 cut(s) 461
BstUI CGCG 1 cut(s) 1835
BstV2I GAAGAC 1 cut(s) 2531
BstX2I RGATCY 2 cut(s) 2240, 2749
BstYI RGATCY 2 cut(s) 2240, 2749
BstZ17I GTATAC 1 cut(s) 1211
Bsu15I ATCGAT 1 cut(s) 2264
Bsu36I CCTNAGG 2 cut(s) 1479, 2009
BsuI GTATCC 1 cut(s) 1957
BsuRI GGCC 1 cut(s) 2768
BsuTUI ATCGAT 1 cut(s) 2264
BtsI GCAGTG 1 cut(s) 1287
BtsIMutI CAGTG 3 cut(s) 1287, 2535, 2837
BveI ACCTGC 1 cut(s) 1316
Cac8I GCNNGC 5 cut(s) 69, 111, 603, 975, 1131
CaiI CAGNNNCTG 2 cut(s) 1331, 2678
CciI TCATGA 1 cut(s) 1735
Cfr13I GGNCC 2 cut(s) 1328, 2815
ClaI ATCGAT 1 cut(s) 2264
CseI GACGC 4 cut(s) 799, 1331, 2244, 2726
Csp6I GTAC 4 cut(s) 513, 905, 1416, 2290
CspCI CAANNNNNGTGG 2 cut(s) 1111, 1146
CviQI GTAC 4 cut(s) 513, 905, 1416, 2290
DraI TTTAAA 1 cut(s) 2076
DraIII CACNNNGTG 2 cut(s) 334, 2843
EaeI YGGCCR 1 cut(s) 2766
Ecl136II GAGCTC 1 cut(s) 2615
Eco105I TACGTA 1 cut(s) 461
Eco130I CCWWGG 3 cut(s) 888, 2253, 2411
Eco24I GRGCYC 1 cut(s) 2617
Eco31I GGTCTC 2 cut(s) 963, 1733
Eco47I GGWCC 2 cut(s) 1328, 2815
Eco53kI GAGCTC 1 cut(s) 2615
Eco57I CTGAAG 2 cut(s) 735, 1659
Eco81I CCTNAGG 2 cut(s) 1479, 2009
Eco88I CYCGRG 1 cut(s) 1134
EcoICRI GAGCTC 1 cut(s) 2615
EcoO109I RGGNCCY 1 cut(s) 1328
EcoRI GAATTC 1 cut(s) 650
EcoRII CCWGG 3 cut(s) 779, 841, 1532
EcoT14I CCWWGG 3 cut(s) 888, 2253, 2411
EcoT38I GRGCYC 1 cut(s) 2617
ErhI CCWWGG 3 cut(s) 888, 2253, 2411
Esp3I CGTCTC 1 cut(s) 1314
FalI AAGNNNNNCTT 2 cut(s) 2313, 2345
FaqI GGGAC 2 cut(s) 1255, 1990
FauI CCCGC 2 cut(s) 594, 903
FbaI TGATCA 2 cut(s) 436, 1066
FblI GTMKAC 2 cut(s) 409, 1210
FriOI GRGCYC 1 cut(s) 2617
FspBI CTAG 4 cut(s) 1103, 1856, 2397, 2938
GsaI CCCAGC 1 cut(s) 612
GsuI CTGGAG 2 cut(s) 308, 802
HaeIII GGCC 1 cut(s) 2768
HapII CCGG 2 cut(s) 134, 358
HgaI GACGC 4 cut(s) 799, 1331, 2244, 2726
Hin1I GRCGYC 1 cut(s) 810
HincII GTYRAC 3 cut(s) 1305, 1911, 2556
HindII GTYRAC 3 cut(s) 1305, 1911, 2556
HpaI GTTAAC 1 cut(s) 1305
HpaII CCGG 2 cut(s) 134, 358
HphI GGTGA 2 cut(s) 659, 1775
Hpy166II GTNNAC 8 cut(s) 167, 410, 1211, 1305, 1411, 1544, 1911, 2556
Hpy8I GTNNAC 8 cut(s) 167, 410, 1211, 1305, 1411, 1544, 1911, 2556
HpyCH4IV ACGT 1 cut(s) 460
HpyF10VI GCNNNNNNNGC 5 cut(s) 68, 893, 1868, 2315, 2324
HpySE526I ACGT 1 cut(s) 460
Hsp92I GRCGYC 1 cut(s) 810
Kpn2I TCCGGA 1 cut(s) 133
Ksp22I TGATCA 2 cut(s) 436, 1066
KspAI GTTAAC 1 cut(s) 1305
LweI GCATC 3 cut(s) 461, 1069, 2437
MaeI CTAG 4 cut(s) 1103, 1856, 2397, 2938
MaeII ACGT 1 cut(s) 460
MaeIII GTNAC 7 cut(s) 95, 299, 1249, 1777, 2379, 2457, 2571
MfeI CAATTG 1 cut(s) 2100
MflI RGATCY 2 cut(s) 2240, 2749
MhlI GDGCHC 4 cut(s) 1546, 2059, 2617, 2627
MlyI GAGTC 2 cut(s) 2155, 2366
MroI TCCGGA 1 cut(s) 133
MslI CAYNNNNRTG 3 cut(s) 590, 1074, 2519
MspA1I CMGCKG 2 cut(s) 608, 1679
MspI CCGG 2 cut(s) 134, 358
MspR9I CCNGG 3 cut(s) 781, 843, 1534
MunI CAATTG 1 cut(s) 2100
Mva1269I GAATGC 1 cut(s) 2734
MvaI CCWGG 3 cut(s) 781, 843, 1534
MvnI CGCG 1 cut(s) 1835
MwoI GCNNNNNNNGC 5 cut(s) 68, 893, 1868, 2315, 2324
NlaIV GGNNCC 2 cut(s) 1262, 1707
NmeAIII GCCGAG 2 cut(s) 139, 2258
NmuCI GTSAC 1 cut(s) 2457
NspI RCATGY 2 cut(s) 1369, 2604
NspV TTCGAA 1 cut(s) 2919
PacI TTAATTAA 1 cut(s) 1056
PaeR7I CTCGAG 1 cut(s) 1134
PagI TCATGA 1 cut(s) 1735
PciI ACATGT 2 cut(s) 1365, 2600
PcsI WCGNNNNNNNCGW 1 cut(s) 2285
PctI GAATGC 1 cut(s) 2734
PflFI GACNNNGTC 1 cut(s) 2002
PfoI TCCNGGA 1 cut(s) 779
PleI GAGTC 2 cut(s) 2155, 2366
PpsI GAGTC 2 cut(s) 2155, 2366
Ppu21I YACGTR 1 cut(s) 461
PpuMI RGGWCCY 1 cut(s) 1328
PscI ACATGT 2 cut(s) 1365, 2600
PshAI GACNNNNGTC 1 cut(s) 1326
Psp124BI GAGCTC 1 cut(s) 2617
Psp5II RGGWCCY 1 cut(s) 1328
Psp6I CCWGG 3 cut(s) 779, 841, 1532
PspFI CCCAGC 1 cut(s) 608
PspGI CCWGG 3 cut(s) 779, 841, 1532
PspN4I GGNNCC 2 cut(s) 1262, 1707
PspPI GGNCC 2 cut(s) 1328, 2815
PspPPI RGGWCCY 1 cut(s) 1328
PstNI CAGNNNCTG 2 cut(s) 1331, 2678
PsuI RGATCY 2 cut(s) 2240, 2749
PsyI GACNNNGTC 1 cut(s) 2002
PvuII CAGCTG 2 cut(s) 608, 1679
RsaI GTAC 4 cut(s) 514, 906, 1417, 2291
RsaNI GTAC 4 cut(s) 513, 905, 1416, 2290
RseI CAYNNNNRTG 3 cut(s) 590, 1074, 2519
SacI GAGCTC 1 cut(s) 2617
Sau96I GGNCC 2 cut(s) 1328, 2815
SchI GAGTC 2 cut(s) 2155, 2366
ScrFI CCNGG 3 cut(s) 781, 843, 1534
SduI GDGCHC 4 cut(s) 1546, 2059, 2617, 2627
SfaNI GCATC 3 cut(s) 461, 1069, 2437
SfcI CTRYAG 2 cut(s) 1927, 2113
Sfr274I CTCGAG 1 cut(s) 1134
SfuI TTCGAA 1 cut(s) 2919
SinI GGWCC 2 cut(s) 1328, 2815
SlaI CTCGAG 1 cut(s) 1134
SmiMI CAYNNNNRTG 3 cut(s) 590, 1074, 2519
SmlI CTYRAG 5 cut(s) 13, 310, 564, 1134, 1648
SmoI CTYRAG 5 cut(s) 13, 310, 564, 1134, 1648
SnaBI TACGTA 1 cut(s) 461
SsiI CCGC 8 cut(s) 154, 601, 910, 1201, 1835, 1853, 1961, 2769
SspI AATATT 1 cut(s) 1375
SspMI CTAG 4 cut(s) 1103, 1856, 2397, 2938
SstI GAGCTC 1 cut(s) 2617
StyD4I CCNGG 3 cut(s) 779, 841, 1532
StyI CCWWGG 3 cut(s) 888, 2253, 2411
TaiI ACGT 1 cut(s) 463
TaqI TCGA 8 cut(s) 486, 1135, 1273, 1790, 1997, 2264, 2646, 2919
TauI GCSGC 3 cut(s) 1838, 1855, 2771
TscAI CASTG 3 cut(s) 1287, 2535, 2844
TseFI GTSAC 1 cut(s) 2457
Tsp45I GTSAC 1 cut(s) 2457
TspGWI ACGGA 3 cut(s) 188, 2607, 2642
TspRI CASTG 3 cut(s) 1287, 2535, 2844
Tth111I GACNNNGTC 1 cut(s) 2002
VneI GTGCAC 1 cut(s) 1542
VpaK11BI GGWCC 2 cut(s) 1328, 2815
XceI RCATGY 2 cut(s) 1369, 2604
XhoI CTCGAG 1 cut(s) 1134
XmiI GTMKAC 2 cut(s) 409, 1210
XspI CTAG 4 cut(s) 1103, 1856, 2397, 2938
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.