RecX family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G13226 |
| fragaria_vesca | FvH4_3g42180 FvH4_3g42180 FvH4_3g42180 FvH4_3g42180 |
| malus_domestica | MD03G1037000.v1.1 MD03G1037100.v1.1 |
| prunus_persica | Prupe.6G029100_v2.0.a1 Prupe.6G029900_v2.0.a1 Prupe.6G082900_v2.0.a1 Prupe.6G083000_v2.0.a1 |
| pyrus_communis | pycom03g02850 |
| rosa_chinensis | RchiOBHm_Chr5g0075451 |
| rosa_laevigata | RLG00000036564 |
| rosa_multiflora | Rmu_sc0000770.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00006050 |
| rosa_rugosa | Rorug05G0439700 |
| rosa_samantha | Rh5AG496700 Rh5BG518000 Rh5CG541500 Rh5DG531300 |
| rosa_wichuraiana | Rw5G046070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 321 |
| AciI | CCGC | 2 cut(s) | 41, 321 |
| AcuI | CTGAAG | 1 cut(s) | 296 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 78 |
| AflII | CTTAAG | 1 cut(s) | 73 |
| AgsI | TTSAA | 1 cut(s) | 239 |
| AluBI | AGCT | 4 cut(s) | 33, 214, 330, 345 |
| AluI | AGCT | 4 cut(s) | 33, 214, 330, 345 |
| AoxI | GGCC | 2 cut(s) | 16, 202 |
| AspS9I | GGNCC | 1 cut(s) | 83 |
| AvaII | GGWCC | 1 cut(s) | 83 |
| BbsI | GAAGAC | 1 cut(s) | 60 |
| BccI | CCATC | 1 cut(s) | 57 |
| BfrI | CTTAAG | 1 cut(s) | 73 |
| Bme18I | GGWCC | 1 cut(s) | 83 |
| BmgT120I | GGNCC | 1 cut(s) | 83 |
| BmiI | GGNNCC | 2 cut(s) | 84, 257 |
| BmsI | GCATC | 1 cut(s) | 124 |
| BpiI | GAAGAC | 1 cut(s) | 60 |
| BsaJI | CCNNGG | 2 cut(s) | 86, 259 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 78 |
| Bse1I | ACTGG | 1 cut(s) | 159 |
| BseDI | CCNNGG | 2 cut(s) | 86, 259 |
| BseGI | GGATG | 1 cut(s) | 190 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 78 |
| BseMII | CTCAG | 2 cut(s) | 129, 360 |
| BseNI | ACTGG | 1 cut(s) | 159 |
| BseRI | GAGGAG | 2 cut(s) | 179, 203 |
| BseYI | CCCAGC | 1 cut(s) | 330 |
| Bsh1236I | CGCG | 1 cut(s) | 321 |
| BshFI | GGCC | 2 cut(s) | 18, 204 |
| BslFI | GGGAC | 1 cut(s) | 96 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 78 |
| BsmFI | GGGAC | 1 cut(s) | 96 |
| BsnI | GGCC | 2 cut(s) | 18, 204 |
| BspACI | CCGC | 2 cut(s) | 41, 321 |
| BspANI | GGCC | 2 cut(s) | 18, 204 |
| BspCNI | CTCAG | 2 cut(s) | 130, 361 |
| BspFNI | CGCG | 1 cut(s) | 321 |
| BspLI | GGNNCC | 2 cut(s) | 84, 257 |
| BspTI | CTTAAG | 1 cut(s) | 73 |
| BsrI | ACTGG | 1 cut(s) | 159 |
| BssECI | CCNNGG | 2 cut(s) | 86, 259 |
| BssT1I | CCWWGG | 1 cut(s) | 86 |
| BstAFI | CTTAAG | 1 cut(s) | 73 |
| BstC8I | GCNNGC | 2 cut(s) | 16, 102 |
| BstDEI | CTNAG | 2 cut(s) | 138, 369 |
| BstF5I | GGATG | 1 cut(s) | 190 |
| BstFNI | CGCG | 1 cut(s) | 321 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 97, 143, 327 |
| BstUI | CGCG | 1 cut(s) | 321 |
| BstV2I | GAAGAC | 1 cut(s) | 60 |
| BsuRI | GGCC | 2 cut(s) | 18, 204 |
| BtsCI | GGATG | 1 cut(s) | 190 |
| BtsI | GCAGTG | 1 cut(s) | 257 |
| BtsIMutI | CAGTG | 1 cut(s) | 257 |
| Cac8I | GCNNGC | 2 cut(s) | 16, 102 |
| Cfr13I | GGNCC | 1 cut(s) | 83 |
| CviAII | CATG | 1 cut(s) | 200 |
| CviJI | RGCY | 9 cut(s) | 18, 33, 204, 214, 242, 256, 310, 330, 345 |
| CviKI_1 | RGCY | 9 cut(s) | 18, 33, 204, 214, 242, 256, 310, 330, 345 |
| DdeI | CTNAG | 2 cut(s) | 138, 369 |
| Eco130I | CCWWGG | 1 cut(s) | 86 |
| Eco147I | AGGCCT | 1 cut(s) | 18 |
| Eco47I | GGWCC | 1 cut(s) | 83 |
| Eco57I | CTGAAG | 1 cut(s) | 296 |
| EcoT14I | CCWWGG | 1 cut(s) | 86 |
| ErhI | CCWWGG | 1 cut(s) | 86 |
| FaeI | CATG | 1 cut(s) | 203 |
| FaiI | YATR | 3 cut(s) | 39, 201, 350 |
| FaqI | GGGAC | 1 cut(s) | 96 |
| FatI | CATG | 1 cut(s) | 199 |
| FokI | GGATG | 1 cut(s) | 197 |
| GsaI | CCCAGC | 1 cut(s) | 334 |
| HaeIII | GGCC | 2 cut(s) | 18, 204 |
| Hin1II | CATG | 1 cut(s) | 203 |
| HinfI | GANTC | 2 cut(s) | 324, 365 |
| Hpy188I | TCNGA | 2 cut(s) | 260, 370 |
| Hpy188III | TCNNGA | 2 cut(s) | 60, 266 |
| HpyAV | CCTTC | 1 cut(s) | 136 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 97, 143, 327 |
| HpyF3I | CTNAG | 2 cut(s) | 138, 369 |
| Hsp92II | CATG | 1 cut(s) | 203 |
| LmnI | GCTCC | 1 cut(s) | 261 |
| LpnPI | CCDG | 5 cut(s) | 73, 140, 189, 218, 316 |
| LweI | GCATC | 1 cut(s) | 124 |
| MboII | GAAGA | 1 cut(s) | 60 |
| MluCI | AATT | 3 cut(s) | 147, 195, 226 |
| MnlI | CCTC | 6 cut(s) | 157, 160, 175, 181, 253, 254 |
| MseI | TTAA | 5 cut(s) | 74, 111, 150, 194, 353 |
| MspA1I | CMGCKG | 1 cut(s) | 330 |
| MspCI | CTTAAG | 1 cut(s) | 73 |
| MvnI | CGCG | 1 cut(s) | 321 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 97, 143, 327 |
| NlaIII | CATG | 1 cut(s) | 203 |
| NlaIV | GGNNCC | 2 cut(s) | 84, 257 |
| PceI | AGGCCT | 1 cut(s) | 18 |
| PfeI | GAWTC | 2 cut(s) | 324, 365 |
| PspFI | CCCAGC | 1 cut(s) | 330 |
| PspN4I | GGNNCC | 2 cut(s) | 84, 257 |
| PspPI | GGNCC | 1 cut(s) | 83 |
| PvuII | CAGCTG | 1 cut(s) | 330 |
| SaqAI | TTAA | 5 cut(s) | 74, 111, 150, 194, 353 |
| Sau96I | GGNCC | 1 cut(s) | 83 |
| SetI | ASST | 5 cut(s) | 35, 216, 265, 332, 347 |
| SfaNI | GCATC | 1 cut(s) | 124 |
| SinI | GGWCC | 1 cut(s) | 83 |
| SmlI | CTYRAG | 1 cut(s) | 73 |
| SmoI | CTYRAG | 1 cut(s) | 73 |
| Sse9I | AATT | 3 cut(s) | 147, 195, 226 |
| SseBI | AGGCCT | 1 cut(s) | 18 |
| SsiI | CCGC | 2 cut(s) | 41, 321 |
| StuI | AGGCCT | 1 cut(s) | 18 |
| StyI | CCWWGG | 1 cut(s) | 86 |
| TaqI | TCGA | 1 cut(s) | 209 |
| TasI | AATT | 3 cut(s) | 147, 195, 226 |
| TfiI | GAWTC | 2 cut(s) | 324, 365 |
| Tru1I | TTAA | 5 cut(s) | 74, 111, 150, 194, 353 |
| Tru9I | TTAA | 5 cut(s) | 74, 111, 150, 194, 353 |
| TscAI | CASTG | 1 cut(s) | 257 |
| TspDTI | ATGAA | 2 cut(s) | 188, 337 |
| TspRI | CASTG | 1 cut(s) | 257 |
| Vha464I | CTTAAG | 1 cut(s) | 73 |
| VpaK11BI | GGWCC | 1 cut(s) | 83 |