polyadenylate-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G19350 AT5G19350 |
| fragaria_vesca | FvH4_1g30440 FvH4_1g30440 FvH4_1g30440 |
| malus_domestica | MD03G1176800.v1.1 MD11G1197600.v1.1 |
| prunus_persica | Prupe.5G028700_v2.0.a1 Prupe.5G028700_v2.0.a1 |
| pyrus_communis | pycom03g13400 pycom11g17020 |
| rosa_chinensis | RchiOBHm_Chr3g0491021 |
| rosa_laevigata | RLG00000022869 RLG00000022873 |
| rosa_multiflora | Rmu_sc0009408.1_g000001 Rmu_sc0019624.1_g000001 Rmu_ssc0000386.1_g000038 |
| rosa_roxburghii | Rroxscaffold_6G00393280 |
| rosa_rugosa | Rorug03G0245500 Rorug04G0070300 |
| rosa_samantha | Rh3AG295500 Rh3BG331400 Rh3CG328900 |
| rosa_wichuraiana | Rw3G026080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 370 |
| Acc36I | ACCTGC | 1 cut(s) | 173 |
| Acc65I | GGTACC | 2 cut(s) | 69, 905 |
| AccB1I | GGYRCC | 2 cut(s) | 69, 905 |
| AccI | GTMKAC | 1 cut(s) | 514 |
| AclWI | GGATC | 5 cut(s) | 680, 693, 920, 995, 1121 |
| AcoI | YGGCCR | 2 cut(s) | 223, 1039 |
| AcsI | RAATTY | 1 cut(s) | 251 |
| AcuI | CTGAAG | 2 cut(s) | 78, 828 |
| AcyI | GRCGYC | 1 cut(s) | 367 |
| AfaI | GTAC | 4 cut(s) | 71, 783, 900, 907 |
| AfeI | AGCGCT | 1 cut(s) | 10 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 232, 377, 1186 |
| AgsI | TTSAA | 3 cut(s) | 195, 1061, 1106 |
| AjiI | CACGTC | 1 cut(s) | 57 |
| AjnI | CCWGG | 3 cut(s) | 310, 901, 908 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 445, 477 |
| AluBI | AGCT | 5 cut(s) | 479, 815, 887, 1166, 1241 |
| AluI | AGCT | 5 cut(s) | 479, 815, 887, 1166, 1241 |
| Alw21I | GWGCWC | 1 cut(s) | 390 |
| AlwI | GGATC | 5 cut(s) | 680, 693, 920, 995, 1121 |
| Aor51HI | AGCGCT | 1 cut(s) | 10 |
| AoxI | GGCC | 5 cut(s) | 223, 380, 1039, 1188, 1202 |
| ApeKI | GCWGC | 9 cut(s) | 266, 269, 436, 533, 575, 941, 1073, 1163, 1234 |
| ApoI | RAATTY | 1 cut(s) | 251 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 279, 447 |
| Asp718I | GGTACC | 2 cut(s) | 69, 905 |
| AspLEI | GCGC | 1 cut(s) | 11 |
| AspS9I | GGNCC | 2 cut(s) | 380, 1188 |
| AsuHPI | GGTGA | 1 cut(s) | 199 |
| AsuII | TTCGAA | 1 cut(s) | 451 |
| BalI | TGGCCA | 2 cut(s) | 225, 1041 |
| BamHI | GGATCC | 1 cut(s) | 685 |
| BanI | GGYRCC | 2 cut(s) | 69, 905 |
| BanII | GRGCYC | 1 cut(s) | 881 |
| BbsI | GAAGAC | 1 cut(s) | 51 |
| Bbv12I | GWGCWC | 1 cut(s) | 390 |
| BbvCI | CCTCAGC | 1 cut(s) | 18 |
| BbvI | GCAGC | 8 cut(s) | 253, 281, 423, 545, 562, 928, 1060, 1175 |
| BccI | CCATC | 4 cut(s) | 31, 1012, 1105, 1199 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 959, 993 |
| BciT130I | CCWGG | 3 cut(s) | 312, 903, 910 |
| BfmI | CTRYAG | 2 cut(s) | 267, 636 |
| BfoI | RGCGCY | 1 cut(s) | 12 |
| BfuAI | ACCTGC | 1 cut(s) | 173 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1210 |
| BlpI | GCTNAGC | 1 cut(s) | 12 |
| Bme1390I | CCNGG | 3 cut(s) | 312, 903, 910 |
| BmgBI | CACGTC | 1 cut(s) | 57 |
| BmgT120I | GGNCC | 2 cut(s) | 380, 1188 |
| BmiI | GGNNCC | 6 cut(s) | 48, 71, 473, 687, 878, 907 |
| BmrFI | CCNGG | 3 cut(s) | 312, 903, 910 |
| BmrI | ACTGGG | 1 cut(s) | 349 |
| BmsI | GCATC | 7 cut(s) | 85, 364, 510, 809, 816, 961, 1060 |
| BmuI | ACTGGG | 1 cut(s) | 349 |
| BpiI | GAAGAC | 1 cut(s) | 51 |
| Bpu10I | CCTNAGC | 2 cut(s) | 18, 384 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 12 |
| Bpu14I | TTCGAA | 1 cut(s) | 451 |
| BpuEI | CTTGAG | 2 cut(s) | 493, 695 |
| BsaAI | YACGTR | 1 cut(s) | 209 |
| BsaBI | GATNNNNATC | 1 cut(s) | 524 |
| BsaHI | GRCGYC | 1 cut(s) | 367 |
| BsaJI | CCNNGG | 2 cut(s) | 909, 1131 |
| BsaWI | WCCGGW | 1 cut(s) | 1141 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 232, 377, 1186 |
| Bse118I | RCCGGY | 2 cut(s) | 179, 1200 |
| Bse1I | ACTGG | 3 cut(s) | 226, 344, 559 |
| Bse8I | GATNNNNATC | 1 cut(s) | 524 |
| BseBI | CCWGG | 3 cut(s) | 312, 903, 910 |
| BseDI | CCNNGG | 2 cut(s) | 909, 1131 |
| BseGI | GGATG | 4 cut(s) | 709, 776, 831, 1129 |
| BseJI | GATNNNNATC | 1 cut(s) | 524 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 232, 377, 1186 |
| BseMII | CTCAG | 5 cut(s) | 26, 32, 77, 375, 1205 |
| BseNI | ACTGG | 3 cut(s) | 226, 344, 559 |
| BseRI | GAGGAG | 1 cut(s) | 116 |
| BseXI | GCAGC | 8 cut(s) | 253, 281, 423, 545, 562, 928, 1060, 1175 |
| BseYI | CCCAGC | 2 cut(s) | 377, 601 |
| BsgI | GTGCAG | 1 cut(s) | 552 |
| BshFI | GGCC | 5 cut(s) | 225, 382, 1041, 1190, 1204 |
| BshNI | GGYRCC | 2 cut(s) | 69, 905 |
| BsiHKAI | GWGCWC | 1 cut(s) | 390 |
| BsiSI | CCGG | 4 cut(s) | 180, 230, 1142, 1201 |
| BslFI | GGGAC | 3 cut(s) | 313, 584, 805 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 232, 377, 1186 |
| BsmFI | GGGAC | 3 cut(s) | 313, 584, 805 |
| BsnI | GGCC | 5 cut(s) | 225, 382, 1041, 1190, 1204 |
| Bsp119I | TTCGAA | 1 cut(s) | 451 |
| Bsp1286I | GDGCHC | 2 cut(s) | 390, 881 |
| Bsp1407I | TGTACA | 1 cut(s) | 781 |
| Bsp143I | GATC | 5 cut(s) | 685, 840, 925, 1000, 1126 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 12 |
| BspANI | GGCC | 5 cut(s) | 225, 382, 1041, 1190, 1204 |
| BspCNI | CTCAG | 5 cut(s) | 25, 31, 76, 376, 1206 |
| BspLI | GGNNCC | 6 cut(s) | 48, 71, 473, 687, 878, 907 |
| BspMAI | CTGCAG | 1 cut(s) | 271 |
| BspMI | ACCTGC | 1 cut(s) | 173 |
| BspPI | GGATC | 5 cut(s) | 680, 693, 920, 995, 1121 |
| BspT104I | TTCGAA | 1 cut(s) | 451 |
| BspT107I | GGYRCC | 2 cut(s) | 69, 905 |
| BsrFI | RCCGGY | 2 cut(s) | 179, 1200 |
| BsrGI | TGTACA | 1 cut(s) | 781 |
| BsrI | ACTGG | 3 cut(s) | 226, 344, 559 |
| BssAI | RCCGGY | 2 cut(s) | 179, 1200 |
| BssECI | CCNNGG | 2 cut(s) | 909, 1131 |
| BssMI | GATC | 5 cut(s) | 685, 840, 925, 1000, 1126 |
| BssNI | GRCGYC | 1 cut(s) | 367 |
| BssT1I | CCWWGG | 1 cut(s) | 1131 |
| Bst2UI | CCWGG | 3 cut(s) | 312, 903, 910 |
| Bst4CI | ACNGT | 2 cut(s) | 135, 786 |
| Bst6I | CTCTTC | 1 cut(s) | 1110 |
| BstACI | GRCGYC | 1 cut(s) | 367 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1022 |
| BstAUI | TGTACA | 1 cut(s) | 781 |
| BstBAI | YACGTR | 1 cut(s) | 209 |
| BstBI | TTCGAA | 1 cut(s) | 451 |
| BstC8I | GCNNGC | 7 cut(s) | 227, 288, 921, 1033, 1177, 1202, 1239 |
| BstDEI | CTNAG | 6 cut(s) | 12, 18, 63, 384, 1214, 1242 |
| BstF5I | GGATG | 4 cut(s) | 709, 776, 831, 1129 |
| BstH2I | RGCGCY | 1 cut(s) | 12 |
| BstHHI | GCGC | 1 cut(s) | 11 |
| BstKTI | GATC | 5 cut(s) | 688, 843, 928, 1003, 1129 |
| BstMBI | GATC | 5 cut(s) | 685, 840, 925, 1000, 1126 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 22, 584, 812, 986, 1022, 1079, 1088, 1172, 1210 |
| BstNI | CCWGG | 3 cut(s) | 312, 903, 910 |
| BstNSI | RCATGY | 1 cut(s) | 290 |
| BstSCI | CCNGG | 3 cut(s) | 310, 901, 908 |
| BstSFI | CTRYAG | 2 cut(s) | 267, 636 |
| BstSNI | TACGTA | 1 cut(s) | 209 |
| BstV1I | GCAGC | 8 cut(s) | 253, 281, 423, 545, 562, 928, 1060, 1175 |
| BstV2I | GAAGAC | 1 cut(s) | 51 |
| BstX2I | RGATCY | 2 cut(s) | 685, 925 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 936 |
| BstYI | RGATCY | 2 cut(s) | 685, 925 |
| BsuRI | GGCC | 5 cut(s) | 225, 382, 1041, 1190, 1204 |
| BtrI | CACGTC | 1 cut(s) | 57 |
| BtsCI | GGATG | 4 cut(s) | 709, 776, 831, 1129 |
| BtsIMutI | CAGTG | 4 cut(s) | 102, 219, 535, 552 |
| BveI | ACCTGC | 1 cut(s) | 173 |
| Cac8I | GCNNGC | 7 cut(s) | 227, 288, 921, 1033, 1177, 1202, 1239 |
| CfoI | GCGC | 1 cut(s) | 11 |
| Cfr10I | RCCGGY | 2 cut(s) | 179, 1200 |
| Cfr13I | GGNCC | 2 cut(s) | 380, 1188 |
| CsiI | ACCWGGT | 1 cut(s) | 901 |
| Csp6I | GTAC | 4 cut(s) | 70, 782, 899, 906 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 78, 113, 652, 687, 754, 789 |
| CviAII | CATG | 2 cut(s) | 263, 287 |
| CviQI | GTAC | 4 cut(s) | 70, 782, 899, 906 |
| DdeI | CTNAG | 6 cut(s) | 12, 18, 63, 384, 1214, 1242 |
| DpnI | GATC | 5 cut(s) | 687, 842, 927, 1002, 1128 |
| DpnII | GATC | 5 cut(s) | 685, 840, 925, 1000, 1126 |
| EaeI | YGGCCR | 2 cut(s) | 223, 1039 |
| Eam1104I | CTCTTC | 1 cut(s) | 1110 |
| EarI | CTCTTC | 1 cut(s) | 1110 |
| EciI | GGCGGA | 1 cut(s) | 713 |
| Eco105I | TACGTA | 1 cut(s) | 209 |
| Eco130I | CCWWGG | 1 cut(s) | 1131 |
| Eco24I | GRGCYC | 1 cut(s) | 881 |
| Eco47III | AGCGCT | 1 cut(s) | 10 |
| Eco57I | CTGAAG | 2 cut(s) | 78, 828 |
| EcoRII | CCWGG | 3 cut(s) | 310, 901, 908 |
| EcoT14I | CCWWGG | 1 cut(s) | 1131 |
| EcoT22I | ATGCAT | 1 cut(s) | 1018 |
| EcoT38I | GRGCYC | 1 cut(s) | 881 |
| ErhI | CCWWGG | 1 cut(s) | 1131 |
| FaeI | CATG | 2 cut(s) | 266, 290 |
| FaqI | GGGAC | 3 cut(s) | 313, 584, 805 |
| FatI | CATG | 2 cut(s) | 262, 286 |
| FauI | CCCGC | 2 cut(s) | 1075, 1184 |
| FauNDI | CATATG | 2 cut(s) | 1018, 1027 |
| FblI | GTMKAC | 1 cut(s) | 514 |
| FokI | GGATG | 4 cut(s) | 716, 783, 838, 1136 |
| FriOI | GRGCYC | 1 cut(s) | 881 |
| GlaI | GCGC | 1 cut(s) | 10 |
| GsaI | CCCAGC | 2 cut(s) | 381, 605 |
| HaeII | RGCGCY | 1 cut(s) | 12 |
| HaeIII | GGCC | 5 cut(s) | 225, 382, 1041, 1190, 1204 |
| HapII | CCGG | 4 cut(s) | 180, 230, 1142, 1201 |
| HhaI | GCGC | 1 cut(s) | 11 |
| Hin1I | GRCGYC | 1 cut(s) | 367 |
| Hin1II | CATG | 2 cut(s) | 266, 290 |
| Hin6I | GCGC | 1 cut(s) | 9 |
| HinP1I | GCGC | 1 cut(s) | 9 |
| HincII | GTYRAC | 1 cut(s) | 848 |
| HindII | GTYRAC | 1 cut(s) | 848 |
| HindIII | AAGCTT | 1 cut(s) | 1239 |
| HinfI | GANTC | 2 cut(s) | 754, 994 |
| HpaII | CCGG | 4 cut(s) | 180, 230, 1142, 1201 |
| HphI | GGTGA | 1 cut(s) | 199 |
| Hpy166II | GTNNAC | 4 cut(s) | 145, 515, 655, 848 |
| Hpy188I | TCNGA | 2 cut(s) | 110, 487 |
| Hpy188III | TCNNGA | 6 cut(s) | 118, 371, 464, 751, 998, 1067 |
| Hpy8I | GTNNAC | 4 cut(s) | 145, 515, 655, 848 |
| HpyAV | CCTTC | 1 cut(s) | 1055 |
| HpyCH4III | ACNGT | 2 cut(s) | 135, 786 |
| HpyCH4IV | ACGT | 6 cut(s) | 56, 208, 367, 651, 897, 1146 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 22, 584, 812, 986, 1022, 1079, 1088, 1172, 1210 |
| HpyF3I | CTNAG | 6 cut(s) | 12, 18, 63, 384, 1214, 1242 |
| HpySE526I | ACGT | 6 cut(s) | 56, 208, 367, 651, 897, 1146 |
| Hsp92I | GRCGYC | 1 cut(s) | 367 |
| Hsp92II | CATG | 2 cut(s) | 266, 290 |
| HspAI | GCGC | 1 cut(s) | 9 |
| KpnI | GGTACC | 2 cut(s) | 73, 909 |
| KroI | GCCGGC | 1 cut(s) | 1200 |
| KroNI | GCCGGC | 1 cut(s) | 1202 |
| Kzo9I | GATC | 5 cut(s) | 685, 840, 925, 1000, 1126 |
| LmnI | GCTCC | 2 cut(s) | 52, 876 |
| Lsp1109I | GCAGC | 8 cut(s) | 253, 281, 423, 545, 562, 928, 1060, 1175 |
| LweI | GCATC | 7 cut(s) | 85, 364, 510, 809, 816, 961, 1060 |
| MabI | ACCWGGT | 1 cut(s) | 901 |
| MaeII | ACGT | 6 cut(s) | 56, 208, 367, 651, 897, 1146 |
| MaeIII | GTNAC | 2 cut(s) | 421, 677 |
| MalI | GATC | 5 cut(s) | 687, 842, 927, 1002, 1128 |
| MboI | GATC | 5 cut(s) | 685, 840, 925, 1000, 1126 |
| MboII | GAAGA | 4 cut(s) | 51, 556, 821, 1127 |
| MflI | RGATCY | 2 cut(s) | 685, 925 |
| MhlI | GDGCHC | 2 cut(s) | 390, 881 |
| MlsI | TGGCCA | 2 cut(s) | 225, 1041 |
| MluCI | AATT | 2 cut(s) | 251, 457 |
| MluNI | TGGCCA | 2 cut(s) | 225, 1041 |
| MlyI | GAGTC | 1 cut(s) | 988 |
| MmeI | TCCRAC | 1 cut(s) | 1101 |
| Mox20I | TGGCCA | 2 cut(s) | 225, 1041 |
| Mph1103I | ATGCAT | 1 cut(s) | 1018 |
| MroNI | GCCGGC | 1 cut(s) | 1200 |
| MroXI | GAANNNNTTC | 2 cut(s) | 279, 447 |
| MscI | TGGCCA | 2 cut(s) | 225, 1041 |
| MseI | TTAA | 1 cut(s) | 1157 |
| Msp20I | TGGCCA | 2 cut(s) | 225, 1041 |
| MspA1I | CMGCKG | 1 cut(s) | 272 |
| MspI | CCGG | 4 cut(s) | 180, 230, 1142, 1201 |
| MspR9I | CCNGG | 3 cut(s) | 312, 903, 910 |
| MvaI | CCWGG | 3 cut(s) | 312, 903, 910 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 22, 584, 812, 986, 1022, 1079, 1088, 1172, 1210 |
| NaeI | GCCGGC | 1 cut(s) | 1202 |
| NdeI | CATATG | 2 cut(s) | 1018, 1027 |
| NdeII | GATC | 5 cut(s) | 685, 840, 925, 1000, 1126 |
| NgoMIV | GCCGGC | 1 cut(s) | 1200 |
| NlaIII | CATG | 2 cut(s) | 266, 290 |
| NlaIV | GGNNCC | 6 cut(s) | 48, 71, 473, 687, 878, 907 |
| NmeAIII | GCCGAG | 1 cut(s) | 51 |
| NsiI | ATGCAT | 1 cut(s) | 1018 |
| NspI | RCATGY | 1 cut(s) | 290 |
| NspV | TTCGAA | 1 cut(s) | 451 |
| PaeI | GCATGC | 1 cut(s) | 290 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1179 |
| PdiI | GCCGGC | 1 cut(s) | 1202 |
| PdmI | GAANNNNTTC | 2 cut(s) | 279, 447 |
| PfeI | GAWTC | 1 cut(s) | 754 |
| PleI | GAGTC | 1 cut(s) | 988 |
| PpsI | GAGTC | 1 cut(s) | 988 |
| Ppu21I | YACGTR | 1 cut(s) | 209 |
| Psp6I | CCWGG | 3 cut(s) | 310, 901, 908 |
| PspFI | CCCAGC | 2 cut(s) | 377, 601 |
| PspGI | CCWGG | 3 cut(s) | 310, 901, 908 |
| PspN4I | GGNNCC | 6 cut(s) | 48, 71, 473, 687, 878, 907 |
| PspPI | GGNCC | 2 cut(s) | 380, 1188 |
| PstI | CTGCAG | 1 cut(s) | 271 |
| PsuI | RGATCY | 2 cut(s) | 685, 925 |
| RsaI | GTAC | 4 cut(s) | 71, 783, 900, 907 |
| RsaNI | GTAC | 4 cut(s) | 70, 782, 899, 906 |
| SaqAI | TTAA | 1 cut(s) | 1157 |
| Sau3AI | GATC | 5 cut(s) | 685, 840, 925, 1000, 1126 |
| Sau96I | GGNCC | 2 cut(s) | 380, 1188 |
| SchI | GAGTC | 1 cut(s) | 988 |
| ScrFI | CCNGG | 3 cut(s) | 312, 903, 910 |
| SduI | GDGCHC | 2 cut(s) | 390, 881 |
| SexAI | ACCWGGT | 1 cut(s) | 901 |
| SfaNI | GCATC | 7 cut(s) | 85, 364, 510, 809, 816, 961, 1060 |
| SfcI | CTRYAG | 2 cut(s) | 267, 636 |
| SfuI | TTCGAA | 1 cut(s) | 451 |
| SgrAI | CRCCGGYG | 1 cut(s) | 179 |
| SmlI | CTYRAG | 2 cut(s) | 508, 710 |
| SmoI | CTYRAG | 2 cut(s) | 508, 710 |
| SnaBI | TACGTA | 1 cut(s) | 209 |
| SphI | GCATGC | 1 cut(s) | 290 |
| Sse9I | AATT | 2 cut(s) | 251, 457 |
| StyD4I | CCNGG | 3 cut(s) | 310, 901, 908 |
| StyI | CCWWGG | 1 cut(s) | 1131 |
| TaaI | ACNGT | 2 cut(s) | 135, 786 |
| TaiI | ACGT | 6 cut(s) | 59, 211, 370, 654, 900, 1149 |
| TaqI | TCGA | 1 cut(s) | 451 |
| TaqII | GACCGA | 2 cut(s) | 532, 833 |
| TasI | AATT | 2 cut(s) | 251, 457 |
| TatI | WGTACW | 1 cut(s) | 781 |
| TauI | GCSGC | 5 cut(s) | 25, 44, 47, 581, 992 |
| TfiI | GAWTC | 1 cut(s) | 754 |
| Tru1I | TTAA | 1 cut(s) | 1157 |
| Tru9I | TTAA | 1 cut(s) | 1157 |
| TscAI | CASTG | 4 cut(s) | 102, 226, 535, 559 |
| TseI | GCWGC | 9 cut(s) | 266, 269, 436, 533, 575, 941, 1073, 1163, 1234 |
| TspDTI | ATGAA | 2 cut(s) | 506, 720 |
| TspGWI | ACGGA | 1 cut(s) | 848 |
| TspRI | CASTG | 4 cut(s) | 102, 226, 535, 559 |
| XapI | RAATTY | 1 cut(s) | 251 |
| XceI | RCATGY | 1 cut(s) | 290 |
| XmiI | GTMKAC | 1 cut(s) | 514 |
| XmnI | GAANNNNTTC | 2 cut(s) | 279, 447 |
| ZraI | GACGTC | 1 cut(s) | 368 |
| Zsp2I | ATGCAT | 1 cut(s) | 1018 |