Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0007580

Physical Location & Seq

Genomic Coordinates Reverse (-)

35995293 .. 36002074

Gene Structure 6782 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG295500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1200 bp

ATGATGAACGCGCAGGCTCAGCCGGCAATGGCAGGTCCTCAGGGTTACCCTCATCATCAGCCTACTTCAGTCGAAGAGGTCAGAACCCTCTGGATTGGTGATCTACAGTACTGGGTCGACGAGAACTACCTCACTACTTGCTTTGCTCACACCGGCGAGGTGATTTCTATAAAGATCATACGTAACAAAATCACTGGGCAGCCCGAGGGTTACGGCTTTGTGGAGTTTGTCTCACACGCCGCGGCCGAAAGGATTCTGCATGCTTACAATGGCACTCAAATGCCTGGAACTGAGCAGACTTTTAGGTTGAATTGGGCTTCTTTCGGTATCGGCGAACGGCGTCCTGATGCTGGCCCTGAGCACTCCATTTTCGTAGGGGATTTGGCCCCTGATGTCACCGATTATGTGCTGCAAGAGACTTTTCGGAATACGTATCCGTCCGTTAGAGGTGCCAAGGTTGTCACTGATCCAAACACTGGACGCTCCAAAGGTTATGGCTTTGTCAAGTTTGCTGATGAGGCGGAAAGGAACCGTGCTATGACCGAAATGAATGGTGTTTATTGCTCGACTAGGCCGATGCGGATCAGTGCAGCAACACCAAAGAAAACCACTGGTTTTCAGCAGCAGTATGCTGCAGCAAAAGCTGTATATCCTGTTCCGGCATACACTACACCAGCAGTTCCAGTAGTACCAACAGCAGATTATGATGCAAACAACACTACGATTTTTGTTGGAAACTTGGATCCTAATATTACTGAGGAGGAATTGAAGCAAACTTTTTTGCAATTTGGAGATATTGTCTATGTCAAGATTCCTGCAGGCAAAGGCTGTGGTTTTGTACAGTTTGGGACAAGGGCGTCTGCTGAAGAAGCTATACAAAGGATGCAAGGAAAGATGATTGGCCAACAAGTGGTCCGCATTTCTTGGGGTAGGAGCCCAACAGCTAAACAGGATGTACCTGGTAGCTGGGGCCAGCAAGTAGATCCAAATCAATGGAGTGCATATTATGGTTATGGTCAAGGCTATGATCCCTATGCCTATGGAGCTTCTCAAGATCCATCGTTGTATGCATACAGTGGATATGCCGGTTATGGCCAATATCCTCAACAGGCATGTCTATTTAAATTCAGTTTTGGATGGATGCATATGGTTGCTTTCAATCAGATTTTAATTTTTCTTTTTCTTGTAATGTTGGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006950 GO:0008143 GO:0008150 GO:0009266 GO:0009408 GO:0009628 GO:0009987 GO:0010494 GO:0032991 GO:0033554 GO:0034605 GO:0035770 GO:0036464 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051716 GO:0070717 GO:0097159 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1

Protein Analysis

399

Amino Acids

44.34

Weight (kDa)

6.0

Isoelectric Point (pI)

36.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	30 - 98	1e-13	RNA recognition motif
RRM_1	PF00076	123 - 188	2.5e-16	RNA recognition motif
RRM_1	PF00076	242 - 305	6.4e-19	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007580)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19350 AT5G19350
fragaria_vesca	FvH4_1g30440 FvH4_1g30440 FvH4_1g30440
malus_domestica	MD03G1176800.v1.1 MD11G1197600.v1.1
prunus_persica	Prupe.5G028700_v2.0.a1 Prupe.5G028700_v2.0.a1
pyrus_communis	pycom03g13400 pycom11g17020
rosa_chinensis	RchiOBHm_Chr3g0491021
rosa_laevigata	RLG00000022869 RLG00000022873
rosa_multiflora	Rmu_sc0009408.1_g000001 Rmu_sc0019624.1_g000001 Rmu_ssc0000386.1_g000038
rosa_roxburghii	Rroxscaffold_6G00393280
rosa_rugosa	Rorug03G0245500 Rorug04G0070300
rosa_samantha	Rh3AG295500 Rh3BG331400 Rh3CG328900
rosa_wichuraiana	Rw3G026080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	856
Acc36I	ACCTGC	1 cut(s)	23
AccB1I	GGYRCC	1 cut(s)	449
AccB7I	CCANNNNNTGG	2 cut(s)	476, 910
AccI	GTMKAC	1 cut(s)	117
AccII	CGCG	2 cut(s)	11, 242
AciI	CCGC	5 cut(s)	240, 242, 521, 580, 916
AclWI	GGATC	7 cut(s)	461, 590, 737, 750, 977, 1022, 1049
AcoI	YGGCCR	3 cut(s)	243, 901, 1093
AcsI	RAATTY	1 cut(s)	1124
AcuI	CTGAAG	2 cut(s)	51, 885
AcyI	GRCGYC	2 cut(s)	340, 857
AfaI	GTAC	4 cut(s)	110, 690, 840, 957
AfiI	CCNNNNNNNGG	3 cut(s)	350, 476, 910
AgsI	TTSAA	3 cut(s)	310, 769, 1159
AjnI	CCWGG	2 cut(s)	283, 958
AluBI	AGCT	5 cut(s)	644, 872, 944, 966, 1046
AluI	AGCT	5 cut(s)	644, 872, 944, 966, 1046
Alw21I	GWGCWC	1 cut(s)	363
Alw26I	GTCTC	2 cut(s)	235, 410
AlwI	GGATC	7 cut(s)	461, 590, 737, 750, 977, 1022, 1049
Ama87I	CYCGRG	1 cut(s)	203
AoxI	GGCC	7 cut(s)	243, 352, 384, 572, 901, 970, 1093
ApeKI	GCWGC	6 cut(s)	199, 409, 590, 622, 632, 635
ApoI	RAATTY	1 cut(s)	1124
Asp700I	GAANNNNTTC	1 cut(s)	252
AspLEI	GCGC	1 cut(s)	13
AspS9I	GGNCC	5 cut(s)	35, 353, 385, 913, 970
AsuHPI	GGTGA	3 cut(s)	110, 172, 388
AvaI	CYCGRG	1 cut(s)	203
AvaII	GGWCC	2 cut(s)	35, 913
AxyI	CCTNAGG	1 cut(s)	39
BalI	TGGCCA	2 cut(s)	903, 1095
BamHI	GGATCC	1 cut(s)	742
BanI	GGYRCC	1 cut(s)	449
BanII	GRGCYC	1 cut(s)	938
BarI	GAAGNNNNNNTAC	2 cut(s)	858, 890
Bbv12I	GWGCWC	1 cut(s)	363
BbvI	GCAGC	6 cut(s)	211, 396, 602, 619, 634, 647
BccI	CCATC	2 cut(s)	1066, 1131
BceAI	ACGGC	2 cut(s)	229, 353
BciT130I	CCWGG	2 cut(s)	285, 960
BciVI	GTATCC	1 cut(s)	444
BcoDI	GTCTC	2 cut(s)	235, 410
BfaI	CTAG	1 cut(s)	570
BfmI	CTRYAG	3 cut(s)	104, 633, 816
BfuAI	ACCTGC	1 cut(s)	23
BfuI	GTATCC	1 cut(s)	444
BisI	GCNGC	8 cut(s)	200, 240, 243, 410, 591, 623, 633, 636
BlpI	GCTNAGC	1 cut(s)	18
BlsI	GCNGC	8 cut(s)	201, 241, 244, 411, 592, 624, 634, 637
BmcAI	AGTACT	1 cut(s)	110
Bme1390I	CCNGG	2 cut(s)	285, 960
Bme18I	GGWCC	2 cut(s)	35, 913
BmeT110I	CYCGRG	1 cut(s)	203
BmgT120I	GGNCC	5 cut(s)	35, 353, 385, 913, 970
BmiI	GGNNCC	6 cut(s)	387, 451, 530, 744, 935, 971
BmrFI	CCNGG	2 cut(s)	285, 960
BmrI	ACTGGG	2 cut(s)	121, 204
BmsI	GCATC	5 cut(s)	337, 567, 697, 873, 1131
BmuI	ACTGGG	2 cut(s)	121, 204
BplI	GAGNNNNNCTC	2 cut(s)	215, 247
Bpu10I	CCTNAGC	1 cut(s)	357
Bpu1102I	GCTNAGC	1 cut(s)	18
BpuEI	CTTGAG	1 cut(s)	1035
BsaAI	YACGTR	2 cut(s)	182, 432
BsaBI	GATNNNNATC	2 cut(s)	581, 987
BsaHI	GRCGYC	2 cut(s)	340, 857
BsaJI	CCNNGG	3 cut(s)	204, 240, 453
BsaXI	ACNNNNNCTCC	2 cut(s)	783, 813
Bsc4I	CCNNNNNNNGG	3 cut(s)	350, 476, 910
Bse118I	RCCGGY	3 cut(s)	22, 152, 1085
Bse1I	ACTGG	5 cut(s)	116, 199, 481, 616, 683
Bse21I	CCTNAGG	1 cut(s)	39
Bse3DI	GCAATG	1 cut(s)	33
Bse8I	GATNNNNATC	2 cut(s)	581, 987
BseBI	CCWGG	2 cut(s)	285, 960
BseDI	CCNNGG	3 cut(s)	204, 240, 453
BseGI	GGATG	4 cut(s)	888, 958, 1142, 1146
BseJI	GATNNNNATC	2 cut(s)	581, 987
BseLI	CCNNNNNNNGG	3 cut(s)	350, 476, 910
BseMI	GCAATG	1 cut(s)	33
BseMII	CTCAG	5 cut(s)	32, 53, 282, 348, 747
BseNI	ACTGG	5 cut(s)	116, 199, 481, 616, 683
BseRI	GAGGAG	1 cut(s)	773
BseX3I	CGGCCG	1 cut(s)	243
BseXI	GCAGC	6 cut(s)	211, 396, 602, 619, 634, 647
BseYI	CCCAGC	1 cut(s)	966
BsgI	GTGCAG	1 cut(s)	609
Bsh1236I	CGCG	2 cut(s)	11, 242
Bsh1285I	CGRYCG	1 cut(s)	246
BshFI	GGCC	7 cut(s)	245, 354, 386, 574, 903, 972, 1095
BshNI	GGYRCC	1 cut(s)	449
BsiEI	CGRYCG	1 cut(s)	246
BsiHKAI	GWGCWC	1 cut(s)	363
BsiHKCI	CYCGRG	1 cut(s)	203
BsiSI	CCGG	4 cut(s)	23, 153, 659, 1086
BslFI	GGGAC	1 cut(s)	862
BslI	CCNNNNNNNGG	3 cut(s)	350, 476, 910
BsmAI	GTCTC	2 cut(s)	235, 410
BsmFI	GGGAC	1 cut(s)	862
BsnI	GGCC	7 cut(s)	245, 354, 386, 574, 903, 972, 1095
BsoBI	CYCGRG	1 cut(s)	203
Bsp1286I	GDGCHC	2 cut(s)	363, 938
Bsp1407I	TGTACA	1 cut(s)	838
Bsp143I	GATC	8 cut(s)	100, 174, 466, 582, 742, 982, 1027, 1054
Bsp1720I	GCTNAGC	1 cut(s)	18
BspACI	CCGC	5 cut(s)	240, 242, 521, 580, 916
BspANI	GGCC	7 cut(s)	245, 354, 386, 574, 903, 972, 1095
BspCNI	CTCAG	5 cut(s)	31, 52, 283, 349, 748
BspFNI	CGCG	2 cut(s)	11, 242
BspLI	GGNNCC	6 cut(s)	387, 451, 530, 744, 935, 971
BspMAI	CTGCAG	2 cut(s)	637, 820
BspMI	ACCTGC	1 cut(s)	23
BspPI	GGATC	7 cut(s)	461, 590, 737, 750, 977, 1022, 1049
BspT107I	GGYRCC	1 cut(s)	449
BsrDI	GCAATG	1 cut(s)	33
BsrFI	RCCGGY	3 cut(s)	22, 152, 1085
BsrGI	TGTACA	1 cut(s)	838
BsrI	ACTGG	5 cut(s)	116, 199, 481, 616, 683
BssAI	RCCGGY	3 cut(s)	22, 152, 1085
BssECI	CCNNGG	3 cut(s)	204, 240, 453
BssMI	GATC	8 cut(s)	100, 174, 466, 582, 742, 982, 1027, 1054
BssNI	GRCGYC	2 cut(s)	340, 857
BssT1I	CCWWGG	1 cut(s)	453
Bst2UI	CCWGG	2 cut(s)	285, 960
Bst4CI	ACNGT	4 cut(s)	108, 533, 843, 1076
Bst6I	CTCTTC	1 cut(s)	69
BstACI	GRCGYC	2 cut(s)	340, 857
BstAUI	TGTACA	1 cut(s)	838
BstBAI	YACGTR	2 cut(s)	182, 432
BstC8I	GCNNGC	6 cut(s)	15, 24, 261, 352, 820, 974
BstDEI	CTNAG	5 cut(s)	18, 39, 291, 357, 756
BstDSI	CCRYGG	1 cut(s)	240
BstEII	GGTNACC	1 cut(s)	44
BstF5I	GGATG	4 cut(s)	888, 958, 1142, 1146
BstFNI	CGCG	2 cut(s)	11, 242
BstHHI	GCGC	1 cut(s)	13
BstKTI	GATC	8 cut(s)	103, 177, 469, 585, 745, 985, 1030, 1057
BstMAI	GTCTC	2 cut(s)	235, 410
BstMBI	GATC	8 cut(s)	100, 174, 466, 582, 742, 982, 1027, 1054
BstMCI	CGRYCG	1 cut(s)	246
BstMWI	GCNNNNNNNGC	6 cut(s)	19, 23, 518, 641, 869, 1043
BstNI	CCWGG	2 cut(s)	285, 960
BstNSI	RCATGY	2 cut(s)	263, 1116
BstPI	GGTNACC	1 cut(s)	44
BstSCI	CCNGG	2 cut(s)	283, 958
BstSFI	CTRYAG	3 cut(s)	104, 633, 816
BstSNI	TACGTA	2 cut(s)	182, 432
BstUI	CGCG	2 cut(s)	11, 242
BstV1I	GCAGC	6 cut(s)	211, 396, 602, 619, 634, 647
BstX2I	RGATCY	3 cut(s)	742, 982, 1054
BstXI	CCANNNNNNTGG	1 cut(s)	993
BstYI	RGATCY	3 cut(s)	742, 982, 1054
BstZI	CGGCCG	1 cut(s)	243
Bsu36I	CCTNAGG	1 cut(s)	39
BsuI	GTATCC	1 cut(s)	444
BsuRI	GGCC	7 cut(s)	245, 354, 386, 574, 903, 972, 1095
BtgI	CCRYGG	1 cut(s)	240
BtsCI	GGATG	4 cut(s)	888, 958, 1142, 1146
BtsIMutI	CAGTG	6 cut(s)	192, 462, 474, 592, 609, 1081
BveI	ACCTGC	1 cut(s)	23
Cac8I	GCNNGC	6 cut(s)	15, 24, 261, 352, 820, 974
CfoI	GCGC	1 cut(s)	13
Cfr10I	RCCGGY	3 cut(s)	22, 152, 1085
Cfr13I	GGNCC	5 cut(s)	35, 353, 385, 913, 970
Cfr42I	CCGCGG	1 cut(s)	243
CseI	GACGC	3 cut(s)	329, 489, 846
CsiI	ACCWGGT	1 cut(s)	958
Csp6I	GTAC	4 cut(s)	109, 689, 839, 956
CspCI	CAANNNNNGTGG	2 cut(s)	811, 846
CviAII	CATG	2 cut(s)	260, 1113
CviQI	GTAC	4 cut(s)	109, 689, 839, 956
DdeI	CTNAG	5 cut(s)	18, 39, 291, 357, 756
DpnI	GATC	8 cut(s)	102, 176, 468, 584, 744, 984, 1029, 1056
DpnII	GATC	8 cut(s)	100, 174, 466, 582, 742, 982, 1027, 1054
DraI	TTTAAA	1 cut(s)	1123
DrdI	GACNNNNNNGTC	1 cut(s)	856
DseDI	GACNNNNNNGTC	1 cut(s)	856
EaeI	YGGCCR	3 cut(s)	243, 901, 1093
EagI	CGGCCG	1 cut(s)	243
Eam1104I	CTCTTC	1 cut(s)	69
EarI	CTCTTC	1 cut(s)	69
EciI	GGCGGA	1 cut(s)	536
EclXI	CGGCCG	1 cut(s)	243
Eco105I	TACGTA	2 cut(s)	182, 432
Eco130I	CCWWGG	1 cut(s)	453
Eco24I	GRGCYC	1 cut(s)	938
Eco47I	GGWCC	2 cut(s)	35, 913
Eco52I	CGGCCG	1 cut(s)	243
Eco57I	CTGAAG	2 cut(s)	51, 885
Eco81I	CCTNAGG	1 cut(s)	39
Eco88I	CYCGRG	1 cut(s)	203
Eco91I	GGTNACC	1 cut(s)	44
EcoO109I	RGGNCCY	1 cut(s)	35
EcoO65I	GGTNACC	1 cut(s)	44
EcoRII	CCWGG	2 cut(s)	283, 958
EcoT14I	CCWWGG	1 cut(s)	453
EcoT22I	ATGCAT	2 cut(s)	1072, 1146
EcoT38I	GRGCYC	1 cut(s)	938
ErhI	CCWWGG	1 cut(s)	453
FaeI	CATG	2 cut(s)	263, 1116
FaqI	GGGAC	1 cut(s)	862
FatI	CATG	2 cut(s)	259, 1112
FauNDI	CATATG	1 cut(s)	1146
FblI	GTMKAC	1 cut(s)	117
Fnu4HI	GCNGC	8 cut(s)	200, 240, 243, 410, 591, 623, 633, 636
FokI	GGATG	4 cut(s)	895, 965, 1149, 1153
FriOI	GRGCYC	1 cut(s)	938
Fsp4HI	GCNGC	8 cut(s)	200, 240, 243, 410, 591, 623, 633, 636
FspBI	CTAG	1 cut(s)	570
GlaI	GCGC	1 cut(s)	12
GluI	GCNGC	8 cut(s)	200, 240, 243, 410, 591, 623, 633, 636
GsaI	CCCAGC	1 cut(s)	970
HaeIII	GGCC	7 cut(s)	245, 354, 386, 574, 903, 972, 1095
HapII	CCGG	4 cut(s)	23, 153, 659, 1086
HgaI	GACGC	3 cut(s)	329, 489, 846
HhaI	GCGC	1 cut(s)	13
Hin1I	GRCGYC	2 cut(s)	340, 857
Hin1II	CATG	2 cut(s)	263, 1116
Hin6I	GCGC	1 cut(s)	11
HinP1I	GCGC	1 cut(s)	11
HincII	GTYRAC	1 cut(s)	118
HindII	GTYRAC	1 cut(s)	118
HinfI	GANTC	2 cut(s)	253, 811
HpaII	CCGG	4 cut(s)	23, 153, 659, 1086
HphI	GGTGA	3 cut(s)	110, 172, 388
Hpy166II	GTNNAC	1 cut(s)	118
Hpy188I	TCNGA	3 cut(s)	83, 426, 1164
Hpy188III	TCNNGA	4 cut(s)	91, 344, 808, 1052
Hpy8I	GTNNAC	1 cut(s)	118
Hpy99I	CGWCG	1 cut(s)	122
HpyCH4III	ACNGT	4 cut(s)	108, 533, 843, 1076
HpyCH4IV	ACGT	2 cut(s)	181, 431
HpyF10VI	GCNNNNNNNGC	6 cut(s)	19, 23, 518, 641, 869, 1043
HpyF3I	CTNAG	5 cut(s)	18, 39, 291, 357, 756
HpySE526I	ACGT	2 cut(s)	181, 431
Hsp92I	GRCGYC	2 cut(s)	340, 857
Hsp92II	CATG	2 cut(s)	263, 1116
HspAI	GCGC	1 cut(s)	11
KroI	GCCGGC	1 cut(s)	22
KroNI	GCCGGC	1 cut(s)	24
KspI	CCGCGG	1 cut(s)	243
Kzo9I	GATC	8 cut(s)	100, 174, 466, 582, 742, 982, 1027, 1054
LmnI	GCTCC	3 cut(s)	488, 933, 1043
Lsp1109I	GCAGC	6 cut(s)	211, 396, 602, 619, 634, 647
LweI	GCATC	5 cut(s)	337, 567, 697, 873, 1131
MabI	ACCWGGT	1 cut(s)	958
MaeI	CTAG	1 cut(s)	570
MaeII	ACGT	2 cut(s)	181, 431
MaeIII	GTNAC	5 cut(s)	44, 182, 209, 394, 460
MalI	GATC	8 cut(s)	102, 176, 468, 584, 744, 984, 1029, 1056
MboI	GATC	8 cut(s)	100, 174, 466, 582, 742, 982, 1027, 1054
MboII	GAAGA	2 cut(s)	86, 878
MflI	RGATCY	3 cut(s)	742, 982, 1054
MhlI	GDGCHC	2 cut(s)	363, 938
MlsI	TGGCCA	2 cut(s)	903, 1095
MluCI	AATT	5 cut(s)	310, 764, 785, 1124, 1170
MluNI	TGGCCA	2 cut(s)	903, 1095
MmeI	TCCRAC	1 cut(s)	712
Mox20I	TGGCCA	2 cut(s)	903, 1095
Mph1103I	ATGCAT	2 cut(s)	1072, 1146
MroNI	GCCGGC	1 cut(s)	22
MroXI	GAANNNNTTC	1 cut(s)	252
MscI	TGGCCA	2 cut(s)	903, 1095
MseI	TTAA	3 cut(s)	1122, 1169, 1198
MslI	CAYNNNNRTG	1 cut(s)	278
Msp20I	TGGCCA	2 cut(s)	903, 1095
MspA1I	CMGCKG	1 cut(s)	242
MspI	CCGG	4 cut(s)	23, 153, 659, 1086
MspR9I	CCNGG	2 cut(s)	285, 960
MvaI	CCWGG	2 cut(s)	285, 960
MvnI	CGCG	2 cut(s)	11, 242
MwoI	GCNNNNNNNGC	6 cut(s)	19, 23, 518, 641, 869, 1043
NaeI	GCCGGC	1 cut(s)	24
NdeI	CATATG	1 cut(s)	1146
NdeII	GATC	8 cut(s)	100, 174, 466, 582, 742, 982, 1027, 1054
NgoMIV	GCCGGC	1 cut(s)	22
NlaIII	CATG	2 cut(s)	263, 1116
NlaIV	GGNNCC	6 cut(s)	387, 451, 530, 744, 935, 971
NmuCI	GTSAC	2 cut(s)	394, 460
NsiI	ATGCAT	2 cut(s)	1072, 1146
NspI	RCATGY	2 cut(s)	263, 1116
PaeI	GCATGC	1 cut(s)	263
PcsI	WCGNNNNNNNCGW	3 cut(s)	243, 330, 572
PdiI	GCCGGC	1 cut(s)	24
PdmI	GAANNNNTTC	1 cut(s)	252
PfeI	GAWTC	2 cut(s)	253, 811
PflMI	CCANNNNNTGG	2 cut(s)	476, 910
PkrI	GCNGC	8 cut(s)	201, 241, 244, 411, 592, 624, 634, 637
Ppu21I	YACGTR	2 cut(s)	182, 432
PpuMI	RGGWCCY	1 cut(s)	35
Psp5II	RGGWCCY	1 cut(s)	35
Psp6I	CCWGG	2 cut(s)	283, 958
PspEI	GGTNACC	1 cut(s)	44
PspFI	CCCAGC	1 cut(s)	966
PspGI	CCWGG	2 cut(s)	283, 958
PspN4I	GGNNCC	6 cut(s)	387, 451, 530, 744, 935, 971
PspPI	GGNCC	5 cut(s)	35, 353, 385, 913, 970
PspPPI	RGGWCCY	1 cut(s)	35
PsrI	GAACNNNNNNTAC	2 cut(s)	639, 671
PstI	CTGCAG	2 cut(s)	637, 820
PsuI	RGATCY	3 cut(s)	742, 982, 1054
RsaI	GTAC	4 cut(s)	110, 690, 840, 957
RsaNI	GTAC	4 cut(s)	109, 689, 839, 956
RseI	CAYNNNNRTG	1 cut(s)	278
SacII	CCGCGG	1 cut(s)	243
SalI	GTCGAC	1 cut(s)	116
SaqAI	TTAA	3 cut(s)	1122, 1169, 1198
SatI	GCNGC	8 cut(s)	200, 240, 243, 410, 591, 623, 633, 636
Sau3AI	GATC	8 cut(s)	100, 174, 466, 582, 742, 982, 1027, 1054
Sau96I	GGNCC	5 cut(s)	35, 353, 385, 913, 970
SbfI	CCTGCAGG	1 cut(s)	820
ScaI	AGTACT	1 cut(s)	110
ScrFI	CCNGG	2 cut(s)	285, 960
SdaI	CCTGCAGG	1 cut(s)	820
SduI	GDGCHC	2 cut(s)	363, 938
SexAI	ACCWGGT	1 cut(s)	958
SfaNI	GCATC	5 cut(s)	337, 567, 697, 873, 1131
SfcI	CTRYAG	3 cut(s)	104, 633, 816
Sfr303I	CCGCGG	1 cut(s)	243
SgrAI	CRCCGGYG	1 cut(s)	152
SgrBI	CCGCGG	1 cut(s)	243
SinI	GGWCC	2 cut(s)	35, 913
SmiI	ATTTAAAT	1 cut(s)	1123
SmiMI	CAYNNNNRTG	1 cut(s)	278
SmlI	CTYRAG	1 cut(s)	1050
SmoI	CTYRAG	1 cut(s)	1050
SnaBI	TACGTA	2 cut(s)	182, 432
SphI	GCATGC	1 cut(s)	263
Sse8387I	CCTGCAGG	1 cut(s)	820
Sse9I	AATT	5 cut(s)	310, 764, 785, 1124, 1170
SsiI	CCGC	5 cut(s)	240, 242, 521, 580, 916
SspI	AATATT	1 cut(s)	751
SspMI	CTAG	1 cut(s)	570
StyD4I	CCNGG	2 cut(s)	283, 958
StyI	CCWWGG	1 cut(s)	453
SwaI	ATTTAAAT	1 cut(s)	1123
TaaI	ACNGT	4 cut(s)	108, 533, 843, 1076
TaiI	ACGT	2 cut(s)	184, 434
TaqI	TCGA	3 cut(s)	72, 117, 566
TaqII	GACCGA	1 cut(s)	557
TasI	AATT	5 cut(s)	310, 764, 785, 1124, 1170
TatI	WGTACW	2 cut(s)	108, 838
TauI	GCSGC	2 cut(s)	242, 245
TfiI	GAWTC	2 cut(s)	253, 811
Tru1I	TTAA	3 cut(s)	1122, 1169, 1198
Tru9I	TTAA	3 cut(s)	1122, 1169, 1198
TscAI	CASTG	6 cut(s)	199, 469, 481, 592, 616, 1081
TseFI	GTSAC	2 cut(s)	394, 460
TseI	GCWGC	6 cut(s)	199, 409, 590, 622, 632, 635
Tsp45I	GTSAC	2 cut(s)	394, 460
TspDTI	ATGAA	2 cut(s)	20, 563
TspGWI	ACGGA	2 cut(s)	426, 430
TspRI	CASTG	6 cut(s)	199, 469, 481, 592, 616, 1081
Van91I	CCANNNNNTGG	2 cut(s)	476, 910
VpaK11BI	GGWCC	2 cut(s)	35, 913
XapI	RAATTY	1 cut(s)	1124
XceI	RCATGY	2 cut(s)	263, 1116
XmiI	GTMKAC	1 cut(s)	117
XmnI	GAANNNNTTC	1 cut(s)	252
XspI	CTAG	1 cut(s)	570
ZrmI	AGTACT	1 cut(s)	110
Zsp2I	ATGCAT	2 cut(s)	1072, 1146

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.