Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0007612

Physical Location & Seq

Genomic Coordinates Forward (+)

25758824 .. 25766962

Gene Structure 8139 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1188400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

ATGGCGCTCGAGTCTTTTATTCTATCTCCGAATAAGTTCATTTCCGGGTCGAAATCATGGAATTTCTTGTGTTGCAATGGGCAAACAAAGTTTCCGGTGAAGGTTTTGCTGCGAAATAACCGGTACCCATTTCGATTTGGGCCGAATTGTATCGGTAGTGGCGGTTTTAAGAAGTTCTTGGCTCCAAGGTTAGAAGGACTCGACGTGGTGGTTAATAAAGCTCGTTTGGAAGCTTTAGGCGAAGATAGTGGGAGTGTGGGTGGTACGAATGCTGTTTCGGGTTCAAAGTTTGATTTCGTTAAGGAATTGGTGAAGTGCGGAGTTGTTTTGGCAGCTGTGGTTTGTGGGGTTTTAATTTATGGGTGTAGAAGAGCTTTTGCTGTGGAGGGTGTGATCAATGCAGGCTACGGGGTTATTGGGCAGAGCATATTGTTGCTGAGGAATGCCTGGCCCAAGACATTGCTGGTACTTCAGGTTTTCAAAGAGCAGGGTTTGATTTTGGCCGCGCTTTTGGGTCTCTCGGCGTTTTTTTCAATGGCGGAGACTTCAATTACAACGTTGTGGCCCTGGAAGGTGCGTGAGTTGGCTGAGAAAGAGTCTGAAAATGGCGTCTTCAAATTGCTTCGCAACGATGTTACTCGGTTCTTGACAACCATACTTATTGGCACAACTGTTGTCAATATTGGAGCAACTGCTTTAGTTACAGATGCTGCAACGGCAATATTTGGTGAAGCTGGTGTCACCGCAGCAACTGGAGTAATGACTGTTGCTATTTTGCTCCTCACTGAAATAACTCCAAAAAGTGTTGCTGTTCACAATCCCACAGAGGTTGCTAGGTTTGTGGTTAGGCCAGTGGCGTGGCTTTCTTTGGTATTATACCCCGTGGGGAGAATTGTTACATATCTATCGATGGGGATACTAAAAATACTTGGATTAAAAGGAAGAAGTGAACCGTATGTTACCGAAGAGGAGTTAAAACTGATGCTGCGGGGGGCAGAGTTGAGTGGGGCAATAGAGGAGGAGGAACAGGATATGATCGAAAATGTGTTGGAGATTAAAGACACACATGTTAGAGAGGTGATGACGCCTCTCGTAGATGTAGTTGCCATCGATGCCAGTGCAACGCTAGTTGATTTTCACGACTTGTGGGTAACTCATCAATATTCAAGGGTACCTGTATTTGAACAGCGCGTTGACAATATCGTAGGAATTGCATATGCAATGGATCTACTGGATTATGTTCAGAAGGGTGAGCTACTAGAAAGTACTAGTGTCGGGGATATGGCTCAGAAACCTGCTTACTTTGTGCCCGATTCAATGTCCGTTTGGAATCTCCTTAGGGAGTTCCGCATTCGAAAGGTTCACATGGCCGTAGTTCTTAACGAATACGGTGGAACTGTAGGGATAGTAACCCTGGAAGATGTGGTTGAGGAAATTGTTGGGGAAATATTTGACGAAAATGATTCAAAGGAGGAGATTCAGAAAAAAACTGGCTACATTGTGATGCGTGCAGAGGGGATATATGATGTGGATGCAAACACGTCTATTGATCAACTCTCTGAAGATCTAAATGTCAAGATGCCAGAGGGTCATCAATATGAGACTGTATCAGGTTTTATATGTGAGGCATTTGGATATATCCCAAGGACGGGTGAGAGCATCAAAGTTGTTCTTGAAAATGAAAATGATGAGGCGATTGACGAGACCAAGTCTGACAATCAGGATAAAAAAGAAAAGCACCAAATTTTTAAAATTGAGATACTAGCTGGAAATGCCAGAAAGGTTGGTGCTGTTCGATTTGAAAGGATAGAGAACGATGCTGCTACATTGGAGACCAAAGAGGTGACCCGCTTGGTTCCCAAAATCATGAAAAGAAAGTGGAGTGGTGATCAGGACTCAGACGGTACAGACTATGACGAGGATTCATTTCAGAAGAGACCACAGAATACCATATCTGATGAACATGAAGACGCTGTTGATAATGTCAGTAGACATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBS CorC_HlyC DUF21

Protein Analysis

666

Amino Acids

73.58

Weight (kDa)

4.99

Isoelectric Point (pI)

34.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CNNM	PF01595	165 - 342	4.7e-49	Cyclin M transmembrane N-terminal domain
CBS	PF00571	425 - 480	5.2e-08	CBS domain
CorC_HlyC	PF03471	503 - 602	5.1e-15	Transporter associated domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007612)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55930 AT1G55930 AT3G13070
malus_domestica	MD03G1188400.v1.1 MD11G1204000.v1.1
prunus_persica	Prupe.4G235000_v2.0.a1 Prupe.4G235000_v2.0.a1 Prupe.4G235000_v2.0.a1 Prupe.4G235000_v2.0.a1
pyrus_communis	pycom03g14090 pycom11g17690 pycom11g17700
rosa_chinensis	RchiOBHm_Chr1g0355491 RchiOBHm_Chr2g0115171 RchiOBHm_Chr5g0043101
rosa_laevigata	RLG00000031847
rosa_multiflora	Rmu_sc0001714.1_g000010 Rmu_sc0002079.1_g000010 Rmu_sc0008148.1_g000026
rosa_roxburghii	Rroxscaffold_1G00037630 Rroxscaffold_1G00037750
rosa_samantha	Rh2CG257200 Rh5BG295700
rosa_wichuraiana	Rw2G047580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1303
Acc65I	GGTACC	2 cut(s)	123, 1171
AccB1I	GGYRCC	2 cut(s)	123, 1171
AccI	GTMKAC	1 cut(s)	1990
AccII	CGCG	2 cut(s)	506, 1191
AciI	CCGC	8 cut(s)	162, 318, 504, 539, 744, 988, 1348, 1849
AclI	AACGTT	1 cut(s)	557
AclWI	GGATC	1 cut(s)	1233
AcoI	YGGCCR	2 cut(s)	501, 1368
AcsI	RAATTY	2 cut(s)	61, 1743
AcuI	CTGAAG	2 cut(s)	455, 1581
AcyI	GRCGYC	2 cut(s)	609, 1085
AfaI	GTAC	6 cut(s)	125, 265, 468, 1173, 1267, 1906
AfiI	CCNNNNNNNGG	2 cut(s)	1648, 1649
AflIII	ACRYGT	2 cut(s)	1066, 1539
AgeI	ACCGGT	1 cut(s)	120
AhlI	ACTAGT	1 cut(s)	1268
AjiI	CACGTC	2 cut(s)	205, 1542
AjnI	CCWGG	3 cut(s)	446, 566, 1413
AluBI	AGCT	7 cut(s)	221, 233, 335, 374, 734, 1255, 1766
AluI	AGCT	7 cut(s)	221, 233, 335, 374, 734, 1255, 1766
Alw26I	GTCTC	6 cut(s)	521, 536, 1595, 1697, 1826, 1930
AlwI	GGATC	1 cut(s)	1233
AlwNI	CAGNNNCTG	2 cut(s)	710, 752
Ama87I	CYCGRG	1 cut(s)	8
AoxI	GGCC	6 cut(s)	140, 449, 501, 563, 848, 1368
ApeKI	GCWGC	6 cut(s)	109, 332, 710, 746, 985, 1820
ApoI	RAATTY	2 cut(s)	61, 1743
AsiGI	ACCGGT	1 cut(s)	120
Asp700I	GAANNNNTTC	1 cut(s)	35
Asp718I	GGTACC	2 cut(s)	123, 1171
AspLEI	GCGC	3 cut(s)	7, 508, 1191
AspS9I	GGNCC	3 cut(s)	140, 450, 564
AsuC2I	CCSGG	1 cut(s)	46
AsuHPI	GGTGA	9 cut(s)	109, 322, 733, 740, 1090, 1262, 1664, 1855, 1898
AsuII	TTCGAA	1 cut(s)	1354
AvaI	CYCGRG	1 cut(s)	8
AxyI	CCTNAGG	1 cut(s)	1337
BaeGI	GKGCMC	1 cut(s)	1311
BanI	GGYRCC	2 cut(s)	123, 1171
BbsI	GAAGAC	2 cut(s)	604, 1974
BbvCI	CCTCAGC	1 cut(s)	437
BbvI	GCAGC	6 cut(s)	96, 344, 697, 758, 972, 1807
BccI	CCATC	2 cut(s)	904, 1115
BceAI	ACGGC	2 cut(s)	732, 1355
BcgI	CGANNNNNNTGC	2 cut(s)	1100, 1134
BciT130I	CCWGG	3 cut(s)	448, 568, 1415
BciVI	GTATCC	1 cut(s)	909
BclI	TGATCA	3 cut(s)	393, 1549, 1888
BcnI	CCSGG	1 cut(s)	46
BcoDI	GTCTC	6 cut(s)	521, 536, 1595, 1697, 1826, 1930
BcuI	ACTAGT	1 cut(s)	1268
BfaI	CTAG	5 cut(s)	834, 1127, 1259, 1269, 1763
BfmI	CTRYAG	1 cut(s)	1398
BfoI	RGCGCY	1 cut(s)	8
BfuAI	ACCTGC	1 cut(s)	1303
BfuI	GTATCC	1 cut(s)	909
BglII	AGATCT	1 cut(s)	1564
BisI	GCNGC	7 cut(s)	110, 333, 504, 711, 747, 986, 1821
BlsI	GCNGC	7 cut(s)	111, 334, 505, 712, 748, 987, 1822
BmcAI	AGTACT	1 cut(s)	1267
Bme1390I	CCNGG	4 cut(s)	46, 448, 568, 1415
BmeT110I	CYCGRG	1 cut(s)	8
BmgBI	CACGTC	2 cut(s)	205, 1542
BmgT120I	GGNCC	3 cut(s)	140, 450, 564
BmiI	GGNNCC	4 cut(s)	125, 183, 1173, 1857
BmrFI	CCNGG	4 cut(s)	46, 448, 568, 1415
BmsI	GCATC	8 cut(s)	697, 972, 1102, 1494, 1522, 1569, 1668, 1807
BpiI	GAAGAC	2 cut(s)	604, 1974
BpmI	CTGGAG	1 cut(s)	774
Bpu10I	CCTNAGC	1 cut(s)	437
Bpu14I	TTCGAA	1 cut(s)	1354
BpuMI	CCSGG	1 cut(s)	46
Bsa29I	ATCGAT	2 cut(s)	908, 1110
BsaHI	GRCGYC	2 cut(s)	609, 1085
BsaI	GGTCTC	4 cut(s)	521, 1697, 1826, 1930
BsaJI	CCNNGG	5 cut(s)	185, 566, 882, 1413, 1643
BsaWI	WCCGGW	2 cut(s)	94, 120
BsaXI	ACNNNNNCTCC	2 cut(s)	244, 274
Bsc4I	CCNNNNNNNGG	2 cut(s)	1648, 1649
Bse118I	RCCGGY	1 cut(s)	120
Bse1I	ACTGG	5 cut(s)	757, 851, 1116, 1236, 1495
Bse21I	CCTNAGG	1 cut(s)	1337
Bse3DI	GCAATG	3 cut(s)	82, 458, 1227
BseBI	CCWGG	3 cut(s)	448, 568, 1415
BseCI	ATCGAT	2 cut(s)	908, 1110
BseDI	CCNNGG	5 cut(s)	185, 566, 882, 1413, 1643
BseGI	GGATG	1 cut(s)	1537
BseLI	CCNNNNNNNGG	2 cut(s)	1648, 1649
BseMI	GCAATG	3 cut(s)	82, 458, 1227
BseMII	CTCAG	4 cut(s)	428, 579, 1301, 1911
BseNI	ACTGG	5 cut(s)	757, 851, 1116, 1236, 1495
BseRI	GAGGAG	5 cut(s)	770, 983, 1031, 1034, 1487
BseSI	GKGCMC	1 cut(s)	1311
BseXI	GCAGC	6 cut(s)	96, 344, 697, 758, 972, 1807
BsgI	GTGCAG	1 cut(s)	1530
Bsh1236I	CGCG	2 cut(s)	506, 1191
BshFI	GGCC	6 cut(s)	142, 451, 503, 565, 850, 1370
BshNI	GGYRCC	2 cut(s)	123, 1171
BshTI	ACCGGT	1 cut(s)	120
BshVI	ATCGAT	2 cut(s)	908, 1110
BsiHKCI	CYCGRG	1 cut(s)	8
BsiSI	CCGG	3 cut(s)	45, 95, 121
BslI	CCNNNNNNNGG	2 cut(s)	1648, 1649
BsmAI	GTCTC	6 cut(s)	521, 536, 1595, 1697, 1826, 1930
BsmI	GAATGC	3 cut(s)	274, 448, 1350
BsnI	GGCC	6 cut(s)	142, 451, 503, 565, 850, 1370
Bso31I	GGTCTC	4 cut(s)	521, 1697, 1826, 1930
BsoBI	CYCGRG	1 cut(s)	8
Bsp119I	TTCGAA	1 cut(s)	1354
Bsp1286I	GDGCHC	1 cut(s)	1311
Bsp143I	GATC	6 cut(s)	393, 1035, 1225, 1549, 1564, 1888
BspACI	CCGC	8 cut(s)	162, 318, 504, 539, 744, 988, 1348, 1849
BspANI	GGCC	6 cut(s)	142, 451, 503, 565, 850, 1370
BspCNI	CTCAG	4 cut(s)	429, 580, 1300, 1910
BspDI	ATCGAT	2 cut(s)	908, 1110
BspFNI	CGCG	2 cut(s)	506, 1191
BspHI	TCATGA	1 cut(s)	1866
BspLI	GGNNCC	4 cut(s)	125, 183, 1173, 1857
BspMI	ACCTGC	1 cut(s)	1303
BspPI	GGATC	1 cut(s)	1233
BspQI	GCTCTTC	1 cut(s)	364
BspT104I	TTCGAA	1 cut(s)	1354
BspT107I	GGYRCC	2 cut(s)	123, 1171
BspTNI	GGTCTC	4 cut(s)	521, 1697, 1826, 1930
BsrDI	GCAATG	3 cut(s)	82, 458, 1227
BsrFI	RCCGGY	1 cut(s)	120
BsrI	ACTGG	5 cut(s)	757, 851, 1116, 1236, 1495
BssAI	RCCGGY	1 cut(s)	120
BssECI	CCNNGG	5 cut(s)	185, 566, 882, 1413, 1643
BssMI	GATC	6 cut(s)	393, 1035, 1225, 1549, 1564, 1888
BssNI	GRCGYC	2 cut(s)	609, 1085
BssT1I	CCWWGG	2 cut(s)	185, 1643
Bst2UI	CCWGG	3 cut(s)	448, 568, 1415
Bst4CI	ACNGT	7 cut(s)	673, 766, 954, 1391, 1399, 1606, 1904
Bst6I	CTCTTC	3 cut(s)	364, 960, 1928
BstACI	GRCGYC	2 cut(s)	609, 1085
BstBI	TTCGAA	1 cut(s)	1354
BstC8I	GCNNGC	2 cut(s)	403, 1509
BstDEI	CTNAG	5 cut(s)	437, 588, 1287, 1337, 1897
BstDSI	CCRYGG	1 cut(s)	882
BstEII	GGTNACC	1 cut(s)	1843
BstF5I	GGATG	1 cut(s)	1537
BstFNI	CGCG	2 cut(s)	506, 1191
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	3 cut(s)	7, 508, 1191
BstKTI	GATC	6 cut(s)	396, 1038, 1228, 1552, 1567, 1891
BstMAI	GTCTC	6 cut(s)	521, 536, 1595, 1697, 1826, 1930
BstMBI	GATC	6 cut(s)	393, 1035, 1225, 1549, 1564, 1888
BstMWI	GCNNNNNNNGC	3 cut(s)	716, 1112, 1772
BstNI	CCWGG	3 cut(s)	448, 568, 1415
BstNSI	RCATGY	1 cut(s)	1070
BstPI	GGTNACC	1 cut(s)	1843
BstSCI	CCNGG	4 cut(s)	44, 446, 566, 1413
BstSFI	CTRYAG	1 cut(s)	1398
BstSLI	GKGCMC	1 cut(s)	1311
BstUI	CGCG	2 cut(s)	506, 1191
BstV1I	GCAGC	6 cut(s)	96, 344, 697, 758, 972, 1807
BstV2I	GAAGAC	2 cut(s)	604, 1974
BstX2I	RGATCY	2 cut(s)	1225, 1564
BstXI	CCANNNNNNTGG	1 cut(s)	858
BstYI	RGATCY	2 cut(s)	1225, 1564
Bsu15I	ATCGAT	2 cut(s)	908, 1110
Bsu36I	CCTNAGG	1 cut(s)	1337
BsuI	GTATCC	1 cut(s)	909
BsuRI	GGCC	6 cut(s)	142, 451, 503, 565, 850, 1370
BsuTUI	ATCGAT	2 cut(s)	908, 1110
BtgI	CCRYGG	1 cut(s)	882
BtrI	CACGTC	2 cut(s)	205, 1542
BtsCI	GGATG	1 cut(s)	1537
BtsIMutI	CAGTG	3 cut(s)	783, 858, 1123
BveI	ACCTGC	1 cut(s)	1303
Cac8I	GCNNGC	2 cut(s)	403, 1509
CaiI	CAGNNNCTG	2 cut(s)	710, 752
CciI	TCATGA	1 cut(s)	1866
CfoI	GCGC	3 cut(s)	7, 508, 1191
Cfr10I	RCCGGY	1 cut(s)	120
Cfr13I	GGNCC	3 cut(s)	140, 450, 564
ClaI	ATCGAT	2 cut(s)	908, 1110
CseI	GACGC	3 cut(s)	598, 1093, 1979
Csp6I	GTAC	6 cut(s)	124, 264, 467, 1172, 1266, 1905
CspAI	ACCGGT	1 cut(s)	120
CspCI	CAANNNNNGTGG	2 cut(s)	811, 846
CviAII	CATG	5 cut(s)	57, 1067, 1366, 1867, 1964
CviQI	GTAC	6 cut(s)	124, 264, 467, 1172, 1266, 1905
DdeI	CTNAG	5 cut(s)	437, 588, 1287, 1337, 1897
DpnI	GATC	6 cut(s)	395, 1037, 1227, 1551, 1566, 1890
DpnII	GATC	6 cut(s)	393, 1035, 1225, 1549, 1564, 1888
DraI	TTTAAA	1 cut(s)	1750
EaeI	YGGCCR	2 cut(s)	501, 1368
Eam1104I	CTCTTC	3 cut(s)	364, 960, 1928
EarI	CTCTTC	3 cut(s)	364, 960, 1928
EciI	GGCGGA	1 cut(s)	554
Eco130I	CCWWGG	2 cut(s)	185, 1643
Eco31I	GGTCTC	4 cut(s)	521, 1697, 1826, 1930
Eco57I	CTGAAG	2 cut(s)	455, 1581
Eco81I	CCTNAGG	1 cut(s)	1337
Eco88I	CYCGRG	1 cut(s)	8
Eco91I	GGTNACC	1 cut(s)	1843
EcoO65I	GGTNACC	1 cut(s)	1843
EcoRII	CCWGG	3 cut(s)	446, 566, 1413
EcoT14I	CCWWGG	2 cut(s)	185, 1643
ErhI	CCWWGG	2 cut(s)	185, 1643
FaeI	CATG	5 cut(s)	60, 1070, 1369, 1870, 1967
FalI	AAGNNNNNCTT	4 cut(s)	161, 193, 1656, 1688
FatI	CATG	5 cut(s)	56, 1066, 1365, 1866, 1963
FauI	CCCGC	2 cut(s)	981, 1856
FauNDI	CATATG	1 cut(s)	1216
FbaI	TGATCA	3 cut(s)	393, 1549, 1888
FblI	GTMKAC	1 cut(s)	1990
Fnu4HI	GCNGC	7 cut(s)	110, 333, 504, 711, 747, 986, 1821
FokI	GGATG	1 cut(s)	1544
Fsp4HI	GCNGC	7 cut(s)	110, 333, 504, 711, 747, 986, 1821
FspBI	CTAG	5 cut(s)	834, 1127, 1259, 1269, 1763
GlaI	GCGC	3 cut(s)	6, 507, 1190
GluI	GCNGC	7 cut(s)	110, 333, 504, 711, 747, 986, 1821
GsuI	CTGGAG	1 cut(s)	774
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	6 cut(s)	142, 451, 503, 565, 850, 1370
HapII	CCGG	3 cut(s)	45, 95, 121
HgaI	GACGC	3 cut(s)	598, 1093, 1979
HhaI	GCGC	3 cut(s)	7, 508, 1191
Hin1I	GRCGYC	2 cut(s)	609, 1085
Hin1II	CATG	5 cut(s)	60, 1070, 1369, 1870, 1967
Hin6I	GCGC	3 cut(s)	5, 506, 1189
HinP1I	GCGC	3 cut(s)	5, 506, 1189
HincII	GTYRAC	1 cut(s)	1195
HindII	GTYRAC	1 cut(s)	1195
HindIII	AAGCTT	1 cut(s)	231
HinfI	GANTC	9 cut(s)	11, 198, 596, 1313, 1330, 1463, 1477, 1895, 1922
HpaII	CCGG	3 cut(s)	45, 95, 121
HphI	GGTGA	9 cut(s)	109, 322, 733, 740, 1090, 1262, 1664, 1855, 1898
Hpy166II	GTNNAC	5 cut(s)	814, 950, 1195, 1363, 1991
Hpy188III	TCNNGA	7 cut(s)	646, 1139, 1576, 1673, 1721, 1867, 1892
Hpy8I	GTNNAC	5 cut(s)	814, 950, 1195, 1363, 1991
Hpy99I	CGWCG	1 cut(s)	206
HpyAV	CCTTC	4 cut(s)	94, 188, 565, 1240
HpyCH4III	ACNGT	7 cut(s)	673, 766, 954, 1391, 1399, 1606, 1904
HpyCH4IV	ACGT	3 cut(s)	204, 557, 1541
HpyCH4V	TGCA	8 cut(s)	75, 401, 713, 1121, 1214, 1220, 1511, 1535
HpyF10VI	GCNNNNNNNGC	3 cut(s)	716, 1112, 1772
HpyF3I	CTNAG	5 cut(s)	437, 588, 1287, 1337, 1897
HpySE526I	ACGT	3 cut(s)	204, 557, 1541
Hsp92I	GRCGYC	2 cut(s)	609, 1085
Hsp92II	CATG	5 cut(s)	60, 1070, 1369, 1870, 1967
HspAI	GCGC	3 cut(s)	5, 506, 1189
KpnI	GGTACC	2 cut(s)	127, 1175
Ksp22I	TGATCA	3 cut(s)	393, 1549, 1888
Kzo9I	GATC	6 cut(s)	393, 1035, 1225, 1549, 1564, 1888
LguI	GCTCTTC	1 cut(s)	364
LmnI	GCTCC	3 cut(s)	187, 686, 783
Lsp1109I	GCAGC	6 cut(s)	96, 344, 697, 758, 972, 1807
LweI	GCATC	8 cut(s)	697, 972, 1102, 1494, 1522, 1569, 1668, 1807
MaeI	CTAG	5 cut(s)	834, 1127, 1259, 1269, 1763
MaeII	ACGT	3 cut(s)	204, 557, 1541
MaeIII	GTNAC	8 cut(s)	634, 700, 739, 895, 958, 1150, 1408, 1843
MalI	GATC	6 cut(s)	395, 1037, 1227, 1551, 1566, 1890
MboI	GATC	6 cut(s)	393, 1035, 1225, 1549, 1564, 1888
MboII	GAAGA	9 cut(s)	254, 381, 604, 954, 977, 1430, 1574, 1945, 1979
MflI	RGATCY	2 cut(s)	1225, 1564
MhlI	GDGCHC	1 cut(s)	1311
MlyI	GAGTC	4 cut(s)	20, 192, 605, 1889
MmeI	TCCRAC	1 cut(s)	1029
MroXI	GAANNNNTTC	1 cut(s)	35
MseI	TTAA	9 cut(s)	168, 213, 300, 353, 935, 974, 1056, 1380, 1749
MslI	CAYNNNNRTG	2 cut(s)	1502, 1596
MspA1I	CMGCKG	1 cut(s)	335
MspI	CCGG	3 cut(s)	45, 95, 121
MspR9I	CCNGG	4 cut(s)	46, 448, 568, 1415
Mva1269I	GAATGC	3 cut(s)	274, 448, 1350
MvaI	CCWGG	3 cut(s)	448, 568, 1415
MvnI	CGCG	2 cut(s)	506, 1191
MwoI	GCNNNNNNNGC	3 cut(s)	716, 1112, 1772
NciI	CCSGG	1 cut(s)	46
NdeI	CATATG	1 cut(s)	1216
NdeII	GATC	6 cut(s)	393, 1035, 1225, 1549, 1564, 1888
NlaIII	CATG	5 cut(s)	60, 1070, 1369, 1870, 1967
NlaIV	GGNNCC	4 cut(s)	125, 183, 1173, 1857
NmeAIII	GCCGAG	1 cut(s)	500
NmuCI	GTSAC	2 cut(s)	739, 1843
NspI	RCATGY	1 cut(s)	1070
NspV	TTCGAA	1 cut(s)	1354
PaeR7I	CTCGAG	1 cut(s)	8
PagI	TCATGA	1 cut(s)	1866
PciI	ACATGT	1 cut(s)	1066
PciSI	GCTCTTC	1 cut(s)	364
PctI	GAATGC	3 cut(s)	274, 448, 1350
PdmI	GAANNNNTTC	1 cut(s)	35
PfeI	GAWTC	5 cut(s)	1313, 1330, 1463, 1477, 1922
PflFI	GACNNNGTC	1 cut(s)	1708
PinAI	ACCGGT	1 cut(s)	120
PkrI	GCNGC	7 cut(s)	111, 334, 505, 712, 748, 987, 1822
PleI	GAGTC	4 cut(s)	19, 192, 604, 1889
PpsI	GAGTC	4 cut(s)	19, 192, 604, 1889
PscI	ACATGT	1 cut(s)	1066
Psp1406I	AACGTT	1 cut(s)	557
Psp6I	CCWGG	3 cut(s)	446, 566, 1413
PspEI	GGTNACC	1 cut(s)	1843
PspGI	CCWGG	3 cut(s)	446, 566, 1413
PspN4I	GGNNCC	4 cut(s)	125, 183, 1173, 1857
PspPI	GGNCC	3 cut(s)	140, 450, 564
PspXI	VCTCGAGB	1 cut(s)	8
PstNI	CAGNNNCTG	2 cut(s)	710, 752
PsuI	RGATCY	2 cut(s)	1225, 1564
PsyI	GACNNNGTC	1 cut(s)	1708
PvuII	CAGCTG	1 cut(s)	335
RsaI	GTAC	6 cut(s)	125, 265, 468, 1173, 1267, 1906
RsaNI	GTAC	6 cut(s)	124, 264, 467, 1172, 1266, 1905
RseI	CAYNNNNRTG	2 cut(s)	1502, 1596
SapI	GCTCTTC	1 cut(s)	364
SaqAI	TTAA	9 cut(s)	168, 213, 300, 353, 935, 974, 1056, 1380, 1749
SatI	GCNGC	7 cut(s)	110, 333, 504, 711, 747, 986, 1821
Sau3AI	GATC	6 cut(s)	393, 1035, 1225, 1549, 1564, 1888
Sau96I	GGNCC	3 cut(s)	140, 450, 564
ScaI	AGTACT	1 cut(s)	1267
SchI	GAGTC	4 cut(s)	20, 192, 605, 1889
ScrFI	CCNGG	4 cut(s)	46, 448, 568, 1415
SduI	GDGCHC	1 cut(s)	1311
SfaNI	GCATC	8 cut(s)	697, 972, 1102, 1494, 1522, 1569, 1668, 1807
SfcI	CTRYAG	1 cut(s)	1398
Sfr274I	CTCGAG	1 cut(s)	8
SfuI	TTCGAA	1 cut(s)	1354
SlaI	CTCGAG	1 cut(s)	8
SmiMI	CAYNNNNRTG	2 cut(s)	1502, 1596
SmlI	CTYRAG	1 cut(s)	8
SmoI	CTYRAG	1 cut(s)	8
SpeI	ACTAGT	1 cut(s)	1268
SsiI	CCGC	8 cut(s)	162, 318, 504, 539, 744, 988, 1348, 1849
SspI	AATATT	4 cut(s)	682, 723, 1163, 1449
SspMI	CTAG	5 cut(s)	834, 1127, 1259, 1269, 1763
StyD4I	CCNGG	4 cut(s)	44, 446, 566, 1413
StyI	CCWWGG	2 cut(s)	185, 1643
TaaI	ACNGT	7 cut(s)	673, 766, 954, 1391, 1399, 1606, 1904
TaiI	ACGT	3 cut(s)	207, 560, 1544
TaqI	TCGA	9 cut(s)	9, 50, 133, 201, 908, 1038, 1110, 1354, 1795
TatI	WGTACW	1 cut(s)	1265
TauI	GCSGC	1 cut(s)	506
TfiI	GAWTC	5 cut(s)	1313, 1330, 1463, 1477, 1922
Tru1I	TTAA	9 cut(s)	168, 213, 300, 353, 935, 974, 1056, 1380, 1749
Tru9I	TTAA	9 cut(s)	168, 213, 300, 353, 935, 974, 1056, 1380, 1749
TscAI	CASTG	3 cut(s)	790, 858, 1123
TseFI	GTSAC	2 cut(s)	739, 1843
TseI	GCWGC	6 cut(s)	109, 332, 710, 746, 985, 1820
Tsp45I	GTSAC	2 cut(s)	739, 1843
TspDTI	ATGAA	6 cut(s)	28, 1695, 1883, 1914, 1974, 1980
TspGWI	ACGGA	1 cut(s)	1312
TspRI	CASTG	3 cut(s)	790, 858, 1123
Tth111I	GACNNNGTC	1 cut(s)	1708
XapI	RAATTY	2 cut(s)	61, 1743
XceI	RCATGY	1 cut(s)	1070
XcmI	CCANNNNNNNNNTGG	1 cut(s)	460
XhoI	CTCGAG	1 cut(s)	8
XmiI	GTMKAC	1 cut(s)	1990
XmnI	GAANNNNTTC	1 cut(s)	35
XspI	CTAG	5 cut(s)	834, 1127, 1259, 1269, 1763
ZrmI	AGTACT	1 cut(s)	1267

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.