Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0007612

Physical Location & Seq

Genomic Coordinates Forward (+)

15347711 .. 15354994

Gene Structure 7284 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g14090.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGGCGCTCGAGTCTTTTATTCTGGCTCCGAATAAGTACATTTCCGGGTCGAAATCATGGAATTTCTTGTGTTGCAATGGGCAAACAAAGTTTCCGGTGAAGGTTTTGCCGCGAAATAACCGGTACCCATTTCGATTTGGGCCGAATTGTATCGGTAGTGGCGGTTTTAAGAAGTTCTTAGCTCCAAGGTTAGAAGGAGTCGACGTGGTGGTTAATAAAGCTCGTTTGGAAGCTTTAGGCGAAGATAGTGGGAGTGTGGGTGGTACGAATGCTGTTTCGGGCTCAAAGTTTGATTTCGTTAAGGAATTGGTGAAGTGCGGAGTTGTTTTGGCAGCTGTGGTTTGTGGGGTTTTAATTTATGGGTGTAGAAGAGCTTTTGCTGTGGAGGGTGTGATCAATGCAGGCTATGGAGTTATTGGGCAGAGCATATTGTTGCTGAGGAATGCCTGGCCCAAGACATTGCTGGTTCTTCAGGTTTTCAAGGAGCAGGGTCTGATTTTGGCCGCGCTTTTGGGTCTCTCGGCGTTTTTTTCAATGGCGGAGACTTCAATTACAACGTTGTGGCCCTGGAAGGTGCGTGAGTTGGCTGAGAAAGAGTCTGAAAATGGCGTCTTCAAATTGCTTCGCAACGATGTTACTCGGTTCTTGACAACCATACTTATTGGCACAACTGTTGTCAATATTGGAGCAACTGCTTTAGTTACAGATGCTGCAACGGCAATATTTGGTGAAGCTGGTGTCACCGCAGCAACTGGAGTAATGACTGTTGCTATTTTGCTCCTCACTGAAATAACTCCAAAAAGTGTTGCTGTTCACAATCCCACAGAGGTTGCTAGGTTTGTGGTTAGGCCAGTGGCGTGGCTTTCTTTGGTATTATACCCCGTGGGGAGAATTGTTACATATCTATCGATGGGGATGCTAAAAATACTCGGATTAAAAGGAAGAAGTGAACCGTATGTTACTGAAGAGGAGTTAAAACTGATGCTGCGGGGGGCGGAGTTGAGTGGGGCAATAGAGGAGGAAGAACAGGATATGATCGAAAATGTGTTGGAGATTAAAGACACACATGTTAGAGAGGTGATGACGCCTCTCGTAGACGTAGTTGCCATCGATGCCAGTGCAACGCTAGTTGATTTTCACGACTTGTGGGTAACTCATCAATATTCAAGGGTACCTGTATTTGAACAGCGCATTGACAATATCGTAGGAATTGCATATGCAATGGATCTACTGGATTATGTTCAGAAGGGCGAGCTACTAGAAAGTACTAGTGTCGGGGATATGGCTCAGAAACCTGCTTACTTTGTGCCCGATTCAATGTCCGTTTGGAATCTCCTTAGGGAGTTCCGCATTCGAAAGGTTCACATGGCCGTAGTTCTTAACGAATACGGTGGAACTGTAGGGATAGTAACCCTGGAAGATGTGGTTGAGGAAATTGTTGGGGAAATATTTGATGAAAATGATTCAAAAGAGGAGATTCAGAAAAAAACTGGCTACATTGTGATGCGTGCAGAGGGGATATACGATGTGGATGCAAACACGTCTATTGATCAACTCTCTGAAGATCTAAATGTCAAGATGCCAGAGGGTCATCAATATGAGACTGTATCAGGTTTTATATGTGAGGCATTTGGATATATCCCAAGGACGGGTGAGAGCATTAAAATTGTTCTTGAGAATGAAAATGATGAGGAGATTGACGAGACCAAGTCTGACAATCAGGATAAAAAAGAAAAGCACCAAATTTTTAAAATTGAGATACTAGCAGGAAATGCCAGAAAGGTTGGTGCTGTTCGATTTGAAAGGATAGAGAACGATGCTGCTACATTGGAGACCGAAGAGGTGACCCGCTTGGTTCCCAAAATCATGAAAAGAAAGTGGAGTATCATAATCGGTCGATCAGGACTCAGACGGTACAGACTACGACGAGGATTCATTTCAGAAGAGACCACAGAATACCATATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBS CorC_HlyC DUF21

Protein Analysis

656

Amino Acids

72.73

Weight (kDa)

5.28

Isoelectric Point (pI)

36.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007612)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55930 AT1G55930 AT3G13070
malus_domestica	MD03G1188400.v1.1 MD11G1204000.v1.1
prunus_persica	Prupe.4G235000_v2.0.a1 Prupe.4G235000_v2.0.a1 Prupe.4G235000_v2.0.a1 Prupe.4G235000_v2.0.a1
pyrus_communis	pycom03g14090 pycom11g17690 pycom11g17700
rosa_chinensis	RchiOBHm_Chr1g0355491 RchiOBHm_Chr2g0115171 RchiOBHm_Chr5g0043101
rosa_laevigata	RLG00000031847
rosa_multiflora	Rmu_sc0001714.1_g000010 Rmu_sc0002079.1_g000010 Rmu_sc0008148.1_g000026
rosa_roxburghii	Rroxscaffold_1G00037630 Rroxscaffold_1G00037750
rosa_samantha	Rh2CG257200 Rh5BG295700
rosa_wichuraiana	Rw2G047580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1303
Acc65I	GGTACC	2 cut(s)	123, 1171
AccB1I	GGYRCC	2 cut(s)	123, 1171
AccI	GTMKAC	2 cut(s)	201, 1095
AccII	CGCG	2 cut(s)	112, 506
AclI	AACGTT	1 cut(s)	557
AclWI	GGATC	1 cut(s)	1233
AcoI	YGGCCR	2 cut(s)	501, 1368
AcsI	RAATTY	2 cut(s)	61, 1743
AcuI	CTGAAG	3 cut(s)	455, 984, 1581
AcyI	GRCGYC	2 cut(s)	609, 1085
AfaI	GTAC	6 cut(s)	38, 125, 265, 1173, 1267, 1916
AfiI	CCNNNNNNNGG	2 cut(s)	1648, 1649
AflIII	ACRYGT	2 cut(s)	1066, 1539
AgeI	ACCGGT	1 cut(s)	120
AgsI	TTSAA	9 cut(s)	481, 534, 549, 616, 1167, 1184, 1317, 1467, 1802
AhlI	ACTAGT	1 cut(s)	1268
AjiI	CACGTC	2 cut(s)	205, 1542
AjnI	CCWGG	3 cut(s)	446, 566, 1413
AluBI	AGCT	7 cut(s)	182, 221, 233, 335, 374, 734, 1255
AluI	AGCT	7 cut(s)	182, 221, 233, 335, 374, 734, 1255
Alw26I	GTCTC	6 cut(s)	521, 536, 1595, 1697, 1826, 1940
AlwI	GGATC	1 cut(s)	1233
AlwNI	CAGNNNCTG	3 cut(s)	493, 710, 752
Ama87I	CYCGRG	1 cut(s)	8
AoxI	GGCC	6 cut(s)	140, 449, 501, 563, 848, 1368
ApeKI	GCWGC	5 cut(s)	332, 710, 746, 985, 1820
ApoI	RAATTY	2 cut(s)	61, 1743
AsiGI	ACCGGT	1 cut(s)	120
Asp718I	GGTACC	2 cut(s)	123, 1171
AspLEI	GCGC	3 cut(s)	7, 508, 1191
AspS9I	GGNCC	3 cut(s)	140, 450, 564
AsuC2I	CCSGG	1 cut(s)	46
AsuHPI	GGTGA	7 cut(s)	109, 322, 733, 740, 1090, 1664, 1855
AsuII	TTCGAA	1 cut(s)	1354
AvaI	CYCGRG	1 cut(s)	8
AxyI	CCTNAGG	1 cut(s)	1337
BaeGI	GKGCMC	1 cut(s)	1311
BanI	GGYRCC	2 cut(s)	123, 1171
BanII	GRGCYC	1 cut(s)	284
BbsI	GAAGAC	1 cut(s)	604
BbvCI	CCTCAGC	1 cut(s)	437
BbvI	GCAGC	5 cut(s)	344, 697, 758, 972, 1807
BccI	CCATC	2 cut(s)	904, 1115
BceAI	ACGGC	2 cut(s)	732, 1355
BcgI	CGANNNNNNTGC	6 cut(s)	898, 932, 1100, 1134, 1514, 1548
BciT130I	CCWGG	3 cut(s)	448, 568, 1415
BclI	TGATCA	2 cut(s)	393, 1549
BcnI	CCSGG	1 cut(s)	46
BcoDI	GTCTC	6 cut(s)	521, 536, 1595, 1697, 1826, 1940
BcuI	ACTAGT	1 cut(s)	1268
BfaI	CTAG	5 cut(s)	834, 1127, 1259, 1269, 1763
BfmI	CTRYAG	1 cut(s)	1398
BfoI	RGCGCY	1 cut(s)	8
BfuAI	ACCTGC	1 cut(s)	1303
BglII	AGATCT	1 cut(s)	1564
BisI	GCNGC	7 cut(s)	110, 333, 504, 711, 747, 986, 1821
BlsI	GCNGC	7 cut(s)	111, 334, 505, 712, 748, 987, 1822
BmcAI	AGTACT	1 cut(s)	1267
Bme1390I	CCNGG	4 cut(s)	46, 448, 568, 1415
BmeT110I	CYCGRG	1 cut(s)	8
BmgBI	CACGTC	2 cut(s)	205, 1542
BmgT120I	GGNCC	3 cut(s)	140, 450, 564
BmiI	GGNNCC	4 cut(s)	27, 125, 1173, 1857
BmrFI	CCNGG	4 cut(s)	46, 448, 568, 1415
BmsI	GCATC	8 cut(s)	697, 906, 972, 1102, 1494, 1522, 1569, 1807
BpiI	GAAGAC	1 cut(s)	604
BpmI	CTGGAG	1 cut(s)	774
Bpu10I	CCTNAGC	1 cut(s)	437
Bpu14I	TTCGAA	1 cut(s)	1354
BpuEI	CTTGAG	1 cut(s)	1694
BpuMI	CCSGG	1 cut(s)	46
Bsa29I	ATCGAT	2 cut(s)	908, 1110
BsaHI	GRCGYC	2 cut(s)	609, 1085
BsaI	GGTCTC	4 cut(s)	521, 1697, 1826, 1940
BsaJI	CCNNGG	5 cut(s)	185, 566, 882, 1413, 1643
BsaWI	WCCGGW	2 cut(s)	94, 120
BsaXI	ACNNNNNCTCC	4 cut(s)	189, 219, 244, 274
Bsc4I	CCNNNNNNNGG	2 cut(s)	1648, 1649
Bse118I	RCCGGY	1 cut(s)	120
Bse1I	ACTGG	5 cut(s)	757, 851, 1116, 1236, 1495
Bse21I	CCTNAGG	1 cut(s)	1337
Bse3DI	GCAATG	3 cut(s)	82, 458, 1227
BseBI	CCWGG	3 cut(s)	448, 568, 1415
BseCI	ATCGAT	2 cut(s)	908, 1110
BseDI	CCNNGG	5 cut(s)	185, 566, 882, 1413, 1643
BseGI	GGATG	2 cut(s)	921, 1537
BseLI	CCNNNNNNNGG	2 cut(s)	1648, 1649
BseMI	GCAATG	3 cut(s)	82, 458, 1227
BseMII	CTCAG	4 cut(s)	428, 579, 1301, 1921
BseNI	ACTGG	5 cut(s)	757, 851, 1116, 1236, 1495
BseRI	GAGGAG	5 cut(s)	770, 983, 1031, 1487, 1706
BseSI	GKGCMC	1 cut(s)	1311
BseXI	GCAGC	5 cut(s)	344, 697, 758, 972, 1807
BsgI	GTGCAG	1 cut(s)	1530
Bsh1236I	CGCG	2 cut(s)	112, 506
Bsh1285I	CGRYCG	1 cut(s)	1897
BshFI	GGCC	6 cut(s)	142, 451, 503, 565, 850, 1370
BshNI	GGYRCC	2 cut(s)	123, 1171
BshTI	ACCGGT	1 cut(s)	120
BshVI	ATCGAT	2 cut(s)	908, 1110
BsiEI	CGRYCG	1 cut(s)	1897
BsiHKCI	CYCGRG	1 cut(s)	8
BsiSI	CCGG	3 cut(s)	45, 95, 121
BslI	CCNNNNNNNGG	2 cut(s)	1648, 1649
BsmAI	GTCTC	6 cut(s)	521, 536, 1595, 1697, 1826, 1940
BsmI	GAATGC	3 cut(s)	274, 448, 1350
BsnI	GGCC	6 cut(s)	142, 451, 503, 565, 850, 1370
Bso31I	GGTCTC	4 cut(s)	521, 1697, 1826, 1940
BsoBI	CYCGRG	1 cut(s)	8
Bsp119I	TTCGAA	1 cut(s)	1354
Bsp1286I	GDGCHC	2 cut(s)	284, 1311
Bsp143I	GATC	6 cut(s)	393, 1035, 1225, 1549, 1564, 1898
BspANI	GGCC	6 cut(s)	142, 451, 503, 565, 850, 1370
BspCNI	CTCAG	4 cut(s)	429, 580, 1300, 1920
BspDI	ATCGAT	2 cut(s)	908, 1110
BspFNI	CGCG	2 cut(s)	112, 506
BspHI	TCATGA	1 cut(s)	1866
BspLI	GGNNCC	4 cut(s)	27, 125, 1173, 1857
BspMI	ACCTGC	1 cut(s)	1303
BspPI	GGATC	1 cut(s)	1233
BspQI	GCTCTTC	1 cut(s)	364
BspT104I	TTCGAA	1 cut(s)	1354
BspT107I	GGYRCC	2 cut(s)	123, 1171
BspTNI	GGTCTC	4 cut(s)	521, 1697, 1826, 1940
BsrDI	GCAATG	3 cut(s)	82, 458, 1227
BsrFI	RCCGGY	1 cut(s)	120
BsrI	ACTGG	5 cut(s)	757, 851, 1116, 1236, 1495
BssAI	RCCGGY	1 cut(s)	120
BssECI	CCNNGG	5 cut(s)	185, 566, 882, 1413, 1643
BssMI	GATC	6 cut(s)	393, 1035, 1225, 1549, 1564, 1898
BssNI	GRCGYC	2 cut(s)	609, 1085
BssT1I	CCWWGG	2 cut(s)	185, 1643
Bst2UI	CCWGG	3 cut(s)	448, 568, 1415
Bst4CI	ACNGT	7 cut(s)	673, 766, 954, 1391, 1399, 1606, 1914
Bst6I	CTCTTC	4 cut(s)	364, 960, 1833, 1938
BstACI	GRCGYC	2 cut(s)	609, 1085
BstAPI	GCANNNNNTGC	1 cut(s)	1772
BstBI	TTCGAA	1 cut(s)	1354
BstC8I	GCNNGC	3 cut(s)	403, 1253, 1509
BstDEI	CTNAG	6 cut(s)	178, 437, 588, 1287, 1337, 1907
BstDSI	CCRYGG	1 cut(s)	882
BstEII	GGTNACC	1 cut(s)	1843
BstF5I	GGATG	2 cut(s)	921, 1537
BstFNI	CGCG	2 cut(s)	112, 506
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	3 cut(s)	7, 508, 1191
BstKTI	GATC	6 cut(s)	396, 1038, 1228, 1552, 1567, 1901
BstMAI	GTCTC	6 cut(s)	521, 536, 1595, 1697, 1826, 1940
BstMBI	GATC	6 cut(s)	393, 1035, 1225, 1549, 1564, 1898
BstMCI	CGRYCG	1 cut(s)	1897
BstMWI	GCNNNNNNNGC	3 cut(s)	716, 1112, 1772
BstNI	CCWGG	3 cut(s)	448, 568, 1415
BstNSI	RCATGY	1 cut(s)	1070
BstPI	GGTNACC	1 cut(s)	1843
BstSCI	CCNGG	4 cut(s)	44, 446, 566, 1413
BstSFI	CTRYAG	1 cut(s)	1398
BstSLI	GKGCMC	1 cut(s)	1311
BstUI	CGCG	2 cut(s)	112, 506
BstV1I	GCAGC	5 cut(s)	344, 697, 758, 972, 1807
BstV2I	GAAGAC	1 cut(s)	604
BstX2I	RGATCY	2 cut(s)	1225, 1564
BstXI	CCANNNNNNTGG	1 cut(s)	858
BstYI	RGATCY	2 cut(s)	1225, 1564
Bsu15I	ATCGAT	2 cut(s)	908, 1110
Bsu36I	CCTNAGG	1 cut(s)	1337
BsuRI	GGCC	6 cut(s)	142, 451, 503, 565, 850, 1370
BsuTUI	ATCGAT	2 cut(s)	908, 1110
BtgI	CCRYGG	1 cut(s)	882
BtrI	CACGTC	2 cut(s)	205, 1542
BtsCI	GGATG	2 cut(s)	921, 1537
BtsIMutI	CAGTG	3 cut(s)	783, 858, 1123
BveI	ACCTGC	1 cut(s)	1303
Cac8I	GCNNGC	3 cut(s)	403, 1253, 1509
CaiI	CAGNNNCTG	3 cut(s)	493, 710, 752
CciI	TCATGA	1 cut(s)	1866
CfoI	GCGC	3 cut(s)	7, 508, 1191
Cfr10I	RCCGGY	1 cut(s)	120
Cfr13I	GGNCC	3 cut(s)	140, 450, 564
ClaI	ATCGAT	2 cut(s)	908, 1110
CseI	GACGC	2 cut(s)	598, 1093
Csp6I	GTAC	6 cut(s)	37, 124, 264, 1172, 1266, 1915
CspAI	ACCGGT	1 cut(s)	120
CspCI	CAANNNNNGTGG	2 cut(s)	811, 846
CviAII	CATG	4 cut(s)	57, 1067, 1366, 1867
CviQI	GTAC	6 cut(s)	37, 124, 264, 1172, 1266, 1915
DdeI	CTNAG	6 cut(s)	178, 437, 588, 1287, 1337, 1907
DpnI	GATC	6 cut(s)	395, 1037, 1227, 1551, 1566, 1900
DpnII	GATC	6 cut(s)	393, 1035, 1225, 1549, 1564, 1898
DraI	TTTAAA	1 cut(s)	1750
EaeI	YGGCCR	2 cut(s)	501, 1368
Eam1104I	CTCTTC	4 cut(s)	364, 960, 1833, 1938
EarI	CTCTTC	4 cut(s)	364, 960, 1833, 1938
EciI	GGCGGA	2 cut(s)	554, 1010
Eco130I	CCWWGG	2 cut(s)	185, 1643
Eco24I	GRGCYC	1 cut(s)	284
Eco31I	GGTCTC	4 cut(s)	521, 1697, 1826, 1940
Eco57I	CTGAAG	3 cut(s)	455, 984, 1581
Eco81I	CCTNAGG	1 cut(s)	1337
Eco88I	CYCGRG	1 cut(s)	8
Eco91I	GGTNACC	1 cut(s)	1843
EcoO65I	GGTNACC	1 cut(s)	1843
EcoRII	CCWGG	3 cut(s)	446, 566, 1413
EcoT14I	CCWWGG	2 cut(s)	185, 1643
EcoT38I	GRGCYC	1 cut(s)	284
ErhI	CCWWGG	2 cut(s)	185, 1643
FaeI	CATG	4 cut(s)	60, 1070, 1369, 1870
FalI	AAGNNNNNCTT	2 cut(s)	161, 193
FatI	CATG	4 cut(s)	56, 1066, 1365, 1866
FauI	CCCGC	2 cut(s)	981, 1856
FauNDI	CATATG	1 cut(s)	1216
FbaI	TGATCA	2 cut(s)	393, 1549
FblI	GTMKAC	2 cut(s)	201, 1095
Fnu4HI	GCNGC	7 cut(s)	110, 333, 504, 711, 747, 986, 1821
FokI	GGATG	2 cut(s)	928, 1544
FriOI	GRGCYC	1 cut(s)	284
Fsp4HI	GCNGC	7 cut(s)	110, 333, 504, 711, 747, 986, 1821
FspBI	CTAG	5 cut(s)	834, 1127, 1259, 1269, 1763
GlaI	GCGC	3 cut(s)	6, 507, 1190
GluI	GCNGC	7 cut(s)	110, 333, 504, 711, 747, 986, 1821
GsuI	CTGGAG	1 cut(s)	774
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	6 cut(s)	142, 451, 503, 565, 850, 1370
HapII	CCGG	3 cut(s)	45, 95, 121
HgaI	GACGC	2 cut(s)	598, 1093
HhaI	GCGC	3 cut(s)	7, 508, 1191
Hin1I	GRCGYC	2 cut(s)	609, 1085
Hin1II	CATG	4 cut(s)	60, 1070, 1369, 1870
Hin6I	GCGC	3 cut(s)	5, 506, 1189
HinP1I	GCGC	3 cut(s)	5, 506, 1189
HincII	GTYRAC	1 cut(s)	202
HindII	GTYRAC	1 cut(s)	202
HindIII	AAGCTT	1 cut(s)	231
HinfI	GANTC	9 cut(s)	11, 198, 596, 1313, 1330, 1463, 1477, 1905, 1932
HpaII	CCGG	3 cut(s)	45, 95, 121
HphI	GGTGA	7 cut(s)	109, 322, 733, 740, 1090, 1664, 1855
Hpy166II	GTNNAC	5 cut(s)	202, 814, 950, 1096, 1363
Hpy188III	TCNNGA	7 cut(s)	646, 1139, 1576, 1673, 1721, 1867, 1902
Hpy8I	GTNNAC	5 cut(s)	202, 814, 950, 1096, 1363
Hpy99I	CGWCG	2 cut(s)	206, 1929
HpyAV	CCTTC	4 cut(s)	94, 188, 565, 1240
HpyCH4III	ACNGT	7 cut(s)	673, 766, 954, 1391, 1399, 1606, 1914
HpyCH4IV	ACGT	4 cut(s)	204, 557, 1098, 1541
HpyCH4V	TGCA	8 cut(s)	75, 401, 713, 1121, 1214, 1220, 1511, 1535
HpyF10VI	GCNNNNNNNGC	3 cut(s)	716, 1112, 1772
HpyF3I	CTNAG	6 cut(s)	178, 437, 588, 1287, 1337, 1907
HpySE526I	ACGT	4 cut(s)	204, 557, 1098, 1541
Hsp92I	GRCGYC	2 cut(s)	609, 1085
Hsp92II	CATG	4 cut(s)	60, 1070, 1369, 1870
HspAI	GCGC	3 cut(s)	5, 506, 1189
KpnI	GGTACC	2 cut(s)	127, 1175
Ksp22I	TGATCA	2 cut(s)	393, 1549
Kzo9I	GATC	6 cut(s)	393, 1035, 1225, 1549, 1564, 1898
LguI	GCTCTTC	1 cut(s)	364
LmnI	GCTCC	5 cut(s)	31, 187, 484, 686, 783
Lsp1109I	GCAGC	5 cut(s)	344, 697, 758, 972, 1807
LweI	GCATC	8 cut(s)	697, 906, 972, 1102, 1494, 1522, 1569, 1807
MaeI	CTAG	5 cut(s)	834, 1127, 1259, 1269, 1763
MaeII	ACGT	4 cut(s)	204, 557, 1098, 1541
MaeIII	GTNAC	8 cut(s)	634, 700, 739, 895, 958, 1150, 1408, 1843
MalI	GATC	6 cut(s)	395, 1037, 1227, 1551, 1566, 1900
MboI	GATC	6 cut(s)	393, 1035, 1225, 1549, 1564, 1898
MflI	RGATCY	2 cut(s)	1225, 1564
MhlI	GDGCHC	2 cut(s)	284, 1311
MlyI	GAGTC	4 cut(s)	20, 207, 605, 1899
MmeI	TCCRAC	1 cut(s)	1029
MslI	CAYNNNNRTG	2 cut(s)	1502, 1596
MspA1I	CMGCKG	1 cut(s)	335
MspI	CCGG	3 cut(s)	45, 95, 121
MspR9I	CCNGG	4 cut(s)	46, 448, 568, 1415
Mva1269I	GAATGC	3 cut(s)	274, 448, 1350
MvaI	CCWGG	3 cut(s)	448, 568, 1415
MvnI	CGCG	2 cut(s)	112, 506
MwoI	GCNNNNNNNGC	3 cut(s)	716, 1112, 1772
NciI	CCSGG	1 cut(s)	46
NdeI	CATATG	1 cut(s)	1216
NdeII	GATC	6 cut(s)	393, 1035, 1225, 1549, 1564, 1898
NlaIII	CATG	4 cut(s)	60, 1070, 1369, 1870
NlaIV	GGNNCC	4 cut(s)	27, 125, 1173, 1857
NmeAIII	GCCGAG	1 cut(s)	500
NmuCI	GTSAC	2 cut(s)	739, 1843
NspI	RCATGY	1 cut(s)	1070
NspV	TTCGAA	1 cut(s)	1354
PaeR7I	CTCGAG	1 cut(s)	8
PagI	TCATGA	1 cut(s)	1866
PciI	ACATGT	1 cut(s)	1066
PciSI	GCTCTTC	1 cut(s)	364
PctI	GAATGC	3 cut(s)	274, 448, 1350
PfeI	GAWTC	5 cut(s)	1313, 1330, 1463, 1477, 1932
PflFI	GACNNNGTC	1 cut(s)	1708
PinAI	ACCGGT	1 cut(s)	120
PkrI	GCNGC	7 cut(s)	111, 334, 505, 712, 748, 987, 1822
PleI	GAGTC	4 cut(s)	19, 206, 604, 1899
PpsI	GAGTC	4 cut(s)	19, 206, 604, 1899
PscI	ACATGT	1 cut(s)	1066
Psp1406I	AACGTT	1 cut(s)	557
Psp6I	CCWGG	3 cut(s)	446, 566, 1413
PspEI	GGTNACC	1 cut(s)	1843
PspGI	CCWGG	3 cut(s)	446, 566, 1413
PspN4I	GGNNCC	4 cut(s)	27, 125, 1173, 1857
PspPI	GGNCC	3 cut(s)	140, 450, 564
PspXI	VCTCGAGB	1 cut(s)	8
PstNI	CAGNNNCTG	3 cut(s)	493, 710, 752
PsuI	RGATCY	2 cut(s)	1225, 1564
PsyI	GACNNNGTC	1 cut(s)	1708
PvuII	CAGCTG	1 cut(s)	335
RsaI	GTAC	6 cut(s)	38, 125, 265, 1173, 1267, 1916
RsaNI	GTAC	6 cut(s)	37, 124, 264, 1172, 1266, 1915
RseI	CAYNNNNRTG	2 cut(s)	1502, 1596
SalI	GTCGAC	1 cut(s)	200
SapI	GCTCTTC	1 cut(s)	364
SatI	GCNGC	7 cut(s)	110, 333, 504, 711, 747, 986, 1821
Sau3AI	GATC	6 cut(s)	393, 1035, 1225, 1549, 1564, 1898
Sau96I	GGNCC	3 cut(s)	140, 450, 564
ScaI	AGTACT	1 cut(s)	1267
SchI	GAGTC	4 cut(s)	20, 207, 605, 1899
ScrFI	CCNGG	4 cut(s)	46, 448, 568, 1415
SduI	GDGCHC	2 cut(s)	284, 1311
SfaNI	GCATC	8 cut(s)	697, 906, 972, 1102, 1494, 1522, 1569, 1807
SfcI	CTRYAG	1 cut(s)	1398
Sfr274I	CTCGAG	1 cut(s)	8
SfuI	TTCGAA	1 cut(s)	1354
SlaI	CTCGAG	1 cut(s)	8
SmiMI	CAYNNNNRTG	2 cut(s)	1502, 1596
SmlI	CTYRAG	2 cut(s)	8, 1673
SmoI	CTYRAG	2 cut(s)	8, 1673
SpeI	ACTAGT	1 cut(s)	1268
SspI	AATATT	4 cut(s)	682, 723, 1163, 1449
SspMI	CTAG	5 cut(s)	834, 1127, 1259, 1269, 1763
StyD4I	CCNGG	4 cut(s)	44, 446, 566, 1413
StyI	CCWWGG	2 cut(s)	185, 1643
TaaI	ACNGT	7 cut(s)	673, 766, 954, 1391, 1399, 1606, 1914
TaiI	ACGT	4 cut(s)	207, 560, 1101, 1544
TaqII	GACCGA	2 cut(s)	1850, 1883
TatI	WGTACW	2 cut(s)	36, 1265
TauI	GCSGC	2 cut(s)	112, 506
TfiI	GAWTC	5 cut(s)	1313, 1330, 1463, 1477, 1932
TscAI	CASTG	3 cut(s)	790, 858, 1123
TseFI	GTSAC	2 cut(s)	739, 1843
TseI	GCWGC	5 cut(s)	332, 710, 746, 985, 1820
Tsp45I	GTSAC	2 cut(s)	739, 1843
TspDTI	ATGAA	4 cut(s)	1470, 1695, 1883, 1924
TspGWI	ACGGA	1 cut(s)	1312
TspRI	CASTG	3 cut(s)	790, 858, 1123
Tth111I	GACNNNGTC	1 cut(s)	1708
XapI	RAATTY	2 cut(s)	61, 1743
XceI	RCATGY	1 cut(s)	1070
XcmI	CCANNNNNNNNNTGG	1 cut(s)	460
XhoI	CTCGAG	1 cut(s)	8
XmiI	GTMKAC	2 cut(s)	201, 1095
XspI	CTAG	5 cut(s)	834, 1127, 1259, 1269, 1763
ZrmI	AGTACT	1 cut(s)	1267

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.