BEST Arabidopsis thaliana protein match is
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G50660 |
| fragaria_vesca | FvH4_3g22650 FvH4_3g22650 FvH4_3g22650 FvH4_3g22650 FvH4_3g22650 |
| malus_domestica | MD03G1201300.v1.1 MD11G1218700.v1.1 |
| prunus_persica | Prupe.4G212500_v2.0.a1 |
| pyrus_communis | pycom03g15260 pycom11g19260 |
| rosa_chinensis | RchiOBHm_Chr5g0039421 |
| rosa_laevigata | RLG00000033913 |
| rosa_multiflora | Rmu_co8501983.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00040560 Rroxscaffold_1G00041790 |
| rosa_rugosa | Rorug05G0179100 |
| rosa_samantha | Rh5AG265700 Rh5BG270300 Rh5CG303300 Rh5DG278300 |
| rosa_wichuraiana | Rw5G024900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 424 |
| AccB1I | GGYRCC | 3 cut(s) | 103, 424, 1708 |
| AccII | CGCG | 1 cut(s) | 1796 |
| AclWI | GGATC | 7 cut(s) | 66, 557, 570, 1471, 1484, 1572, 1752 |
| AcoI | YGGCCR | 5 cut(s) | 190, 312, 385, 412, 1762 |
| AcsI | RAATTY | 3 cut(s) | 600, 1201, 1431 |
| AcuI | CTGAAG | 4 cut(s) | 270, 486, 1041, 1470 |
| AcyI | GRCGYC | 1 cut(s) | 167 |
| AfaI | GTAC | 4 cut(s) | 372, 426, 594, 660 |
| AflII | CTTAAG | 1 cut(s) | 748 |
| AflIII | ACRYGT | 1 cut(s) | 1117 |
| AgsI | TTSAA | 8 cut(s) | 124, 577, 665, 838, 1028, 1036, 1292, 1990 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 826 |
| AjnI | CCWGG | 2 cut(s) | 210, 314 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 603, 635 |
| Alw21I | GWGCWC | 3 cut(s) | 691, 744, 1975 |
| Alw26I | GTCTC | 5 cut(s) | 158, 350, 1477, 1639, 1919 |
| Alw44I | GTGCAC | 1 cut(s) | 1971 |
| AlwI | GGATC | 7 cut(s) | 66, 557, 570, 1471, 1484, 1572, 1752 |
| Ama87I | CYCGRG | 3 cut(s) | 99, 161, 684 |
| ApaLI | GTGCAC | 1 cut(s) | 1971 |
| ApeKI | GCWGC | 4 cut(s) | 343, 1271, 1274, 1277 |
| ApoI | RAATTY | 3 cut(s) | 600, 1201, 1431 |
| AseI | ATTAAT | 1 cut(s) | 968 |
| Asp718I | GGTACC | 1 cut(s) | 424 |
| AspA2I | CCTAGG | 1 cut(s) | 491 |
| AspLEI | GCGC | 2 cut(s) | 210, 1798 |
| AspS9I | GGNCC | 6 cut(s) | 115, 129, 197, 301, 495, 2029 |
| AsuC2I | CCSGG | 6 cut(s) | 100, 101, 108, 118, 375, 842 |
| AsuHPI | GGTGA | 4 cut(s) | 56, 1379, 1526, 1679 |
| AsuII | TTCGAA | 3 cut(s) | 1350, 1427, 1823 |
| AsuNHI | GCTAGC | 1 cut(s) | 1415 |
| AvaI | CYCGRG | 3 cut(s) | 99, 161, 684 |
| AvaII | GGWCC | 2 cut(s) | 495, 2029 |
| AvrII | CCTAGG | 1 cut(s) | 491 |
| BaeGI | GKGCMC | 4 cut(s) | 106, 219, 1600, 1975 |
| BalI | TGGCCA | 2 cut(s) | 387, 414 |
| BamHI | GGATCC | 2 cut(s) | 562, 1476 |
| BanI | GGYRCC | 3 cut(s) | 103, 424, 1708 |
| BanII | GRGCYC | 2 cut(s) | 691, 1574 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1822, 1854 |
| BbsI | GAAGAC | 2 cut(s) | 101, 1017 |
| Bbv12I | GWGCWC | 3 cut(s) | 691, 744, 1975 |
| BbvI | GCAGC | 4 cut(s) | 330, 1258, 1261, 1264 |
| BccI | CCATC | 2 cut(s) | 703, 1609 |
| BceAI | ACGGC | 2 cut(s) | 611, 731 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 93, 127, 224, 258, 1922, 1956 |
| BciT130I | CCWGG | 2 cut(s) | 212, 316 |
| BciVI | GTATCC | 1 cut(s) | 1864 |
| BcnI | CCSGG | 6 cut(s) | 100, 101, 108, 118, 375, 842 |
| BcoDI | GTCTC | 5 cut(s) | 158, 350, 1477, 1639, 1919 |
| BfaI | CTAG | 6 cut(s) | 392, 492, 674, 1416, 1799, 2062 |
| BfoI | RGCGCY | 1 cut(s) | 211 |
| BfrI | CTTAAG | 1 cut(s) | 748 |
| BfuI | GTATCC | 1 cut(s) | 1864 |
| BglII | AGATCT | 2 cut(s) | 1192, 2058 |
| BisI | GCNGC | 6 cut(s) | 327, 341, 344, 1272, 1275, 1278 |
| BlnI | CCTAGG | 1 cut(s) | 491 |
| BlpI | GCTNAGC | 2 cut(s) | 669, 1886 |
| BlsI | GCNGC | 6 cut(s) | 328, 342, 345, 1273, 1276, 1279 |
| Bme1390I | CCNGG | 8 cut(s) | 100, 101, 108, 118, 212, 316, 375, 842 |
| Bme18I | GGWCC | 2 cut(s) | 495, 2029 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 826 |
| BmeT110I | CYCGRG | 3 cut(s) | 99, 161, 684 |
| BmgT120I | GGNCC | 6 cut(s) | 115, 129, 197, 301, 495, 2029 |
| BmiI | GGNNCC | 8 cut(s) | 105, 155, 303, 364, 426, 564, 1478, 1710 |
| BmrFI | CCNGG | 8 cut(s) | 100, 101, 108, 118, 212, 316, 375, 842 |
| BmrI | ACTGGG | 1 cut(s) | 1851 |
| BmsI | GCATC | 3 cut(s) | 1129, 1942, 1968 |
| BmtI | GCTAGC | 1 cut(s) | 1419 |
| BmuI | ACTGGG | 1 cut(s) | 1851 |
| BpiI | GAAGAC | 2 cut(s) | 101, 1017 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1688, 1720 |
| BpmI | CTGGAG | 1 cut(s) | 1217 |
| Bpu10I | CCTNAGC | 1 cut(s) | 996 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 669, 1886 |
| Bpu14I | TTCGAA | 3 cut(s) | 1350, 1427, 1823 |
| BpuEI | CTTGAG | 5 cut(s) | 161, 487, 725, 758, 1558 |
| BpuMI | CCSGG | 6 cut(s) | 100, 101, 108, 118, 375, 842 |
| BsaBI | GATNNNNATC | 1 cut(s) | 517 |
| BsaHI | GRCGYC | 1 cut(s) | 167 |
| BsaJI | CCNNGG | 5 cut(s) | 99, 193, 211, 491, 1420 |
| BsaWI | WCCGGW | 2 cut(s) | 365, 1473 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 417, 447, 1997, 2027 |
| Bse1I | ACTGG | 3 cut(s) | 566, 1490, 1846 |
| Bse3DI | GCAATG | 1 cut(s) | 1462 |
| Bse8I | GATNNNNATC | 1 cut(s) | 517 |
| BseBI | CCWGG | 2 cut(s) | 212, 316 |
| BseDI | CCNNGG | 5 cut(s) | 99, 193, 211, 491, 1420 |
| BseGI | GGATG | 2 cut(s) | 1486, 1959 |
| BseJI | GATNNNNATC | 1 cut(s) | 517 |
| BseMI | GCAATG | 1 cut(s) | 1462 |
| BseMII | CTCAG | 6 cut(s) | 660, 858, 1069, 1472, 1650, 1914 |
| BseNI | ACTGG | 3 cut(s) | 566, 1490, 1846 |
| BseRI | GAGGAG | 3 cut(s) | 289, 796, 1172 |
| BseSI | GKGCMC | 4 cut(s) | 106, 219, 1600, 1975 |
| BseXI | GCAGC | 4 cut(s) | 330, 1258, 1261, 1264 |
| BseYI | CCCAGC | 1 cut(s) | 11 |
| Bsh1236I | CGCG | 1 cut(s) | 1796 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1474 |
| BshNI | GGYRCC | 3 cut(s) | 103, 424, 1708 |
| BsiEI | CGRYCG | 1 cut(s) | 1474 |
| BsiHKAI | GWGCWC | 3 cut(s) | 691, 744, 1975 |
| BsiHKCI | CYCGRG | 3 cut(s) | 99, 161, 684 |
| BslFI | GGGAC | 1 cut(s) | 390 |
| BsmAI | GTCTC | 5 cut(s) | 158, 350, 1477, 1639, 1919 |
| BsmBI | CGTCTC | 3 cut(s) | 158, 350, 1919 |
| BsmFI | GGGAC | 1 cut(s) | 390 |
| BsmI | GAATGC | 1 cut(s) | 693 |
| BsoBI | CYCGRG | 3 cut(s) | 99, 161, 684 |
| Bsp119I | TTCGAA | 3 cut(s) | 1350, 1427, 1823 |
| Bsp1286I | GDGCHC | 7 cut(s) | 106, 219, 691, 744, 1574, 1600, 1975 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 669, 1886 |
| Bsp19I | CCATGG | 1 cut(s) | 1420 |
| BspCNI | CTCAG | 6 cut(s) | 661, 859, 1068, 1473, 1649, 1915 |
| BspFNI | CGCG | 1 cut(s) | 1796 |
| BspLI | GGNNCC | 8 cut(s) | 105, 155, 303, 364, 426, 564, 1478, 1710 |
| BspOI | GCTAGC | 1 cut(s) | 1419 |
| BspPI | GGATC | 7 cut(s) | 66, 557, 570, 1471, 1484, 1572, 1752 |
| BspT104I | TTCGAA | 3 cut(s) | 1350, 1427, 1823 |
| BspT107I | GGYRCC | 3 cut(s) | 103, 424, 1708 |
| BspTI | CTTAAG | 1 cut(s) | 748 |
| BsrDI | GCAATG | 1 cut(s) | 1462 |
| BsrI | ACTGG | 3 cut(s) | 566, 1490, 1846 |
| BssECI | CCNNGG | 5 cut(s) | 99, 193, 211, 491, 1420 |
| BssNI | GRCGYC | 1 cut(s) | 167 |
| BssT1I | CCWWGG | 3 cut(s) | 193, 491, 1420 |
| Bst2UI | CCWGG | 2 cut(s) | 212, 316 |
| Bst4CI | ACNGT | 6 cut(s) | 336, 449, 1409, 1441, 1549, 2021 |
| Bst6I | CTCTTC | 3 cut(s) | 246, 845, 1031 |
| BstACI | GRCGYC | 1 cut(s) | 167 |
| BstAFI | CTTAAG | 1 cut(s) | 748 |
| BstBI | TTCGAA | 3 cut(s) | 1350, 1427, 1823 |
| BstDEI | CTNAG | 8 cut(s) | 669, 867, 996, 1055, 1481, 1636, 1886, 1923 |
| BstDSI | CCRYGG | 1 cut(s) | 1420 |
| BstF5I | GGATG | 2 cut(s) | 1486, 1959 |
| BstFNI | CGCG | 1 cut(s) | 1796 |
| BstH2I | RGCGCY | 1 cut(s) | 211 |
| BstHHI | GCGC | 2 cut(s) | 210, 1798 |
| BstMAI | GTCTC | 5 cut(s) | 158, 350, 1477, 1639, 1919 |
| BstMCI | CGRYCG | 1 cut(s) | 1474 |
| BstNI | CCWGG | 2 cut(s) | 212, 316 |
| BstNSI | RCATGY | 1 cut(s) | 934 |
| BstSCI | CCNGG | 8 cut(s) | 98, 99, 106, 116, 210, 314, 373, 840 |
| BstSLI | GKGCMC | 4 cut(s) | 106, 219, 1600, 1975 |
| BstUI | CGCG | 1 cut(s) | 1796 |
| BstV1I | GCAGC | 4 cut(s) | 330, 1258, 1261, 1264 |
| BstV2I | GAAGAC | 2 cut(s) | 101, 1017 |
| BstX2I | RGATCY | 6 cut(s) | 58, 562, 1192, 1476, 1757, 2058 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1772 |
| BstYI | RGATCY | 6 cut(s) | 58, 562, 1192, 1476, 1757, 2058 |
| BsuI | GTATCC | 1 cut(s) | 1864 |
| BtgI | CCRYGG | 1 cut(s) | 1420 |
| BtsCI | GGATG | 2 cut(s) | 1486, 1959 |
| BtsI | GCAGTG | 2 cut(s) | 1400, 1916 |
| BtsIMutI | CAGTG | 3 cut(s) | 766, 1400, 1916 |
| CfoI | GCGC | 2 cut(s) | 210, 1798 |
| Cfr13I | GGNCC | 6 cut(s) | 115, 129, 197, 301, 495, 2029 |
| Cfr9I | CCCGGG | 1 cut(s) | 99 |
| CseI | GACGC | 2 cut(s) | 175, 2027 |
| Csp6I | GTAC | 4 cut(s) | 371, 425, 593, 659 |
| CviAII | CATG | 7 cut(s) | 541, 777, 794, 931, 1048, 1421, 2042 |
| CviQI | GTAC | 4 cut(s) | 371, 425, 593, 659 |
| DdeI | CTNAG | 8 cut(s) | 669, 867, 996, 1055, 1481, 1636, 1886, 1923 |
| DriI | GACNNNNNGTC | 1 cut(s) | 826 |
| EaeI | YGGCCR | 5 cut(s) | 190, 312, 385, 412, 1762 |
| Eam1104I | CTCTTC | 3 cut(s) | 246, 845, 1031 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 826 |
| EarI | CTCTTC | 3 cut(s) | 246, 845, 1031 |
| Ecl136II | GAGCTC | 1 cut(s) | 689 |
| Eco130I | CCWWGG | 3 cut(s) | 193, 491, 1420 |
| Eco24I | GRGCYC | 2 cut(s) | 691, 1574 |
| Eco32I | GATATC | 2 cut(s) | 1336, 1836 |
| Eco47I | GGWCC | 2 cut(s) | 495, 2029 |
| Eco53kI | GAGCTC | 1 cut(s) | 689 |
| Eco57I | CTGAAG | 4 cut(s) | 270, 486, 1041, 1470 |
| Eco88I | CYCGRG | 3 cut(s) | 99, 161, 684 |
| EcoICRI | GAGCTC | 1 cut(s) | 689 |
| EcoO109I | RGGNCCY | 1 cut(s) | 301 |
| EcoRII | CCWGG | 2 cut(s) | 210, 314 |
| EcoRV | GATATC | 2 cut(s) | 1336, 1836 |
| EcoT14I | CCWWGG | 3 cut(s) | 193, 491, 1420 |
| EcoT38I | GRGCYC | 2 cut(s) | 691, 1574 |
| ErhI | CCWWGG | 3 cut(s) | 193, 491, 1420 |
| Esp3I | CGTCTC | 3 cut(s) | 158, 350, 1919 |
| FaeI | CATG | 7 cut(s) | 544, 780, 797, 934, 1051, 1424, 2045 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1869, 1901 |
| FaqI | GGGAC | 1 cut(s) | 390 |
| FatI | CATG | 7 cut(s) | 540, 776, 793, 930, 1047, 1420, 2041 |
| FauI | CCCGC | 6 cut(s) | 29, 95, 120, 1101, 1874, 1971 |
| FauNDI | CATATG | 1 cut(s) | 457 |
| Fnu4HI | GCNGC | 6 cut(s) | 327, 341, 344, 1272, 1275, 1278 |
| FokI | GGATG | 2 cut(s) | 1473, 1946 |
| FriOI | GRGCYC | 2 cut(s) | 691, 1574 |
| Fsp4HI | GCNGC | 6 cut(s) | 327, 341, 344, 1272, 1275, 1278 |
| FspBI | CTAG | 6 cut(s) | 392, 492, 674, 1416, 1799, 2062 |
| GlaI | GCGC | 2 cut(s) | 209, 1797 |
| GluI | GCNGC | 6 cut(s) | 327, 341, 344, 1272, 1275, 1278 |
| GsaI | CCCAGC | 1 cut(s) | 15 |
| GsuI | CTGGAG | 1 cut(s) | 1217 |
| HaeII | RGCGCY | 1 cut(s) | 211 |
| HgaI | GACGC | 2 cut(s) | 175, 2027 |
| HhaI | GCGC | 2 cut(s) | 210, 1798 |
| Hin1I | GRCGYC | 1 cut(s) | 167 |
| Hin1II | CATG | 7 cut(s) | 544, 780, 797, 934, 1051, 1424, 2045 |
| Hin6I | GCGC | 2 cut(s) | 208, 1796 |
| HinP1I | GCGC | 2 cut(s) | 208, 1796 |
| HindIII | AAGCTT | 4 cut(s) | 617, 1130, 1181, 1997 |
| HinfI | GANTC | 7 cut(s) | 53, 513, 853, 1043, 1444, 1461, 1615 |
| HphI | GGTGA | 4 cut(s) | 56, 1379, 1526, 1679 |
| Hpy166II | GTNNAC | 5 cut(s) | 265, 371, 498, 1069, 1973 |
| Hpy8I | GTNNAC | 5 cut(s) | 265, 371, 498, 1069, 1973 |
| HpyCH4III | ACNGT | 6 cut(s) | 336, 449, 1409, 1441, 1549, 2021 |
| HpyCH4IV | ACGT | 1 cut(s) | 1117 |
| HpyCH4V | TGCA | 8 cut(s) | 346, 809, 934, 1090, 1142, 1496, 1959, 1973 |
| HpyF3I | CTNAG | 8 cut(s) | 669, 867, 996, 1055, 1481, 1636, 1886, 1923 |
| HpySE526I | ACGT | 1 cut(s) | 1117 |
| Hsp92I | GRCGYC | 1 cut(s) | 167 |
| Hsp92II | CATG | 7 cut(s) | 544, 780, 797, 934, 1051, 1424, 2045 |
| HspAI | GCGC | 2 cut(s) | 208, 1796 |
| KpnI | GGTACC | 1 cut(s) | 428 |
| LmnI | GCTCC | 3 cut(s) | 153, 700, 783 |
| Lsp1109I | GCAGC | 4 cut(s) | 330, 1258, 1261, 1264 |
| LweI | GCATC | 3 cut(s) | 1129, 1942, 1968 |
| MaeI | CTAG | 6 cut(s) | 392, 492, 674, 1416, 1799, 2062 |
| MaeII | ACGT | 1 cut(s) | 1117 |
| MaeIII | GTNAC | 1 cut(s) | 1222 |
| MfeI | CAATTG | 1 cut(s) | 2033 |
| MflI | RGATCY | 6 cut(s) | 58, 562, 1192, 1476, 1757, 2058 |
| MhlI | GDGCHC | 7 cut(s) | 106, 219, 691, 744, 1574, 1600, 1975 |
| MlsI | TGGCCA | 2 cut(s) | 387, 414 |
| MluNI | TGGCCA | 2 cut(s) | 387, 414 |
| MlyI | GAGTC | 3 cut(s) | 47, 862, 1453 |
| MmeI | TCCRAC | 3 cut(s) | 164, 555, 1995 |
| Mox20I | TGGCCA | 2 cut(s) | 387, 414 |
| MscI | TGGCCA | 2 cut(s) | 387, 414 |
| MseI | TTAA | 5 cut(s) | 749, 891, 968, 1359, 2049 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1512 |
| Msp20I | TGGCCA | 2 cut(s) | 387, 414 |
| MspCI | CTTAAG | 1 cut(s) | 748 |
| MspR9I | CCNGG | 8 cut(s) | 100, 101, 108, 118, 212, 316, 375, 842 |
| MunI | CAATTG | 1 cut(s) | 2033 |
| Mva1269I | GAATGC | 1 cut(s) | 693 |
| MvaI | CCWGG | 2 cut(s) | 212, 316 |
| MvnI | CGCG | 1 cut(s) | 1796 |
| NciI | CCSGG | 6 cut(s) | 100, 101, 108, 118, 375, 842 |
| NcoI | CCATGG | 1 cut(s) | 1420 |
| NdeI | CATATG | 1 cut(s) | 457 |
| NheI | GCTAGC | 1 cut(s) | 1415 |
| NlaIII | CATG | 7 cut(s) | 544, 780, 797, 934, 1051, 1424, 2045 |
| NlaIV | GGNNCC | 8 cut(s) | 105, 155, 303, 364, 426, 564, 1478, 1710 |
| NmeAIII | GCCGAG | 1 cut(s) | 1646 |
| NspI | RCATGY | 1 cut(s) | 934 |
| NspV | TTCGAA | 3 cut(s) | 1350, 1427, 1823 |
| PaeR7I | CTCGAG | 1 cut(s) | 684 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 853 |
| PctI | GAATGC | 1 cut(s) | 693 |
| PfeI | GAWTC | 4 cut(s) | 513, 1043, 1461, 1615 |
| PkrI | GCNGC | 6 cut(s) | 328, 342, 345, 1273, 1276, 1279 |
| PleI | GAGTC | 3 cut(s) | 47, 861, 1452 |
| PpsI | GAGTC | 3 cut(s) | 47, 861, 1452 |
| PshBI | ATTAAT | 1 cut(s) | 968 |
| Psp124BI | GAGCTC | 1 cut(s) | 691 |
| Psp6I | CCWGG | 2 cut(s) | 210, 314 |
| PspFI | CCCAGC | 1 cut(s) | 11 |
| PspGI | CCWGG | 2 cut(s) | 210, 314 |
| PspN4I | GGNNCC | 8 cut(s) | 105, 155, 303, 364, 426, 564, 1478, 1710 |
| PspPI | GGNCC | 6 cut(s) | 115, 129, 197, 301, 495, 2029 |
| PspXI | VCTCGAGB | 1 cut(s) | 684 |
| PsuI | RGATCY | 6 cut(s) | 58, 562, 1192, 1476, 1757, 2058 |
| RsaI | GTAC | 4 cut(s) | 372, 426, 594, 660 |
| RsaNI | GTAC | 4 cut(s) | 371, 425, 593, 659 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1512 |
| SacI | GAGCTC | 1 cut(s) | 691 |
| SaqAI | TTAA | 5 cut(s) | 749, 891, 968, 1359, 2049 |
| SatI | GCNGC | 6 cut(s) | 327, 341, 344, 1272, 1275, 1278 |
| Sau96I | GGNCC | 6 cut(s) | 115, 129, 197, 301, 495, 2029 |
| SchI | GAGTC | 3 cut(s) | 47, 862, 1453 |
| ScrFI | CCNGG | 8 cut(s) | 100, 101, 108, 118, 212, 316, 375, 842 |
| SduI | GDGCHC | 7 cut(s) | 106, 219, 691, 744, 1574, 1600, 1975 |
| SfaNI | GCATC | 3 cut(s) | 1129, 1942, 1968 |
| Sfr274I | CTCGAG | 1 cut(s) | 684 |
| SfuI | TTCGAA | 3 cut(s) | 1350, 1427, 1823 |
| SinI | GGWCC | 2 cut(s) | 495, 2029 |
| SlaI | CTCGAG | 1 cut(s) | 684 |
| SmaI | CCCGGG | 1 cut(s) | 101 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1512 |
| SmlI | CTYRAG | 7 cut(s) | 176, 502, 684, 704, 737, 748, 1573 |
| SmoI | CTYRAG | 7 cut(s) | 176, 502, 684, 704, 737, 748, 1573 |
| SspI | AATATT | 1 cut(s) | 1288 |
| SspMI | CTAG | 6 cut(s) | 392, 492, 674, 1416, 1799, 2062 |
| SstI | GAGCTC | 1 cut(s) | 691 |
| StyD4I | CCNGG | 8 cut(s) | 98, 99, 106, 116, 210, 314, 373, 840 |
| StyI | CCWWGG | 3 cut(s) | 193, 491, 1420 |
| TaaI | ACNGT | 6 cut(s) | 336, 449, 1409, 1441, 1549, 2021 |
| TaiI | ACGT | 1 cut(s) | 1120 |
| TaqI | TCGA | 6 cut(s) | 685, 1350, 1427, 1560, 1823, 1942 |
| TatI | WGTACW | 1 cut(s) | 658 |
| TauI | GCSGC | 2 cut(s) | 329, 343 |
| TfiI | GAWTC | 4 cut(s) | 513, 1043, 1461, 1615 |
| Tru1I | TTAA | 5 cut(s) | 749, 891, 968, 1359, 2049 |
| Tru9I | TTAA | 5 cut(s) | 749, 891, 968, 1359, 2049 |
| TscAI | CASTG | 3 cut(s) | 766, 1400, 1916 |
| TseI | GCWGC | 4 cut(s) | 343, 1271, 1274, 1277 |
| TspDTI | ATGAA | 9 cut(s) | 17, 629, 765, 1064, 1142, 1190, 1329, 1424, 1964 |
| TspGWI | ACGGA | 4 cut(s) | 394, 425, 794, 862 |
| TspMI | CCCGGG | 1 cut(s) | 99 |
| TspRI | CASTG | 3 cut(s) | 766, 1400, 1916 |
| Vha464I | CTTAAG | 1 cut(s) | 748 |
| VneI | GTGCAC | 1 cut(s) | 1971 |
| VpaK11BI | GGWCC | 2 cut(s) | 495, 2029 |
| VspI | ATTAAT | 1 cut(s) | 968 |
| XapI | RAATTY | 3 cut(s) | 600, 1201, 1431 |
| XceI | RCATGY | 1 cut(s) | 934 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 538 |
| XhoI | CTCGAG | 1 cut(s) | 684 |
| XmaI | CCCGGG | 1 cut(s) | 99 |
| XmaJI | CCTAGG | 1 cut(s) | 491 |
| XspI | CTAG | 6 cut(s) | 392, 492, 674, 1416, 1799, 2062 |