Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0009527

Physical Location & Seq

Genomic Coordinates Reverse (-)

16564484 .. 16567778

Gene Structure 3295 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g15260.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1392 bp

ATGAAGATACCCAGCAAGCCCCGCCACCCCTCACCAACATTCCCACCGCCGGACTCGGATCTTCACCTCCACAGACCCACCACCACCCGCAAGAAGACCCGGGCACCCGGTTCGGTCCGGTTGAAGCGGGCCGGACTTCCGACAGGAAAGCGGAGCCGACCCGAGACGCCTTTACTCAAGTGGAAGATCGACCAAGGCCCCGAAGAGCGCCAGGGGCACGGGGAGAGGGGAAGGGACCAAAATGCCCCTGAAGAGGAGAGAGTGGACGGAGGGAGGAGGAAGGGCAGGAAGGGAAAAGAGGCCTCCTTGTCGGCCAGGAAGTTGGCCGCCGGACTGTGGCGGCTGCAGTCGCCGGAGATGGGTTCCGGTATACCGGGACGGAATGGCCAGCTAGGGTTTCAGCCTGACATTGGCCATATCGGGGTACCATTTCTCCGTAATCGCAACAGTAAAACATATGCTTCTGAAGCAAATGATCTTTTACAAAGCCCTAGGTCCACCTCAAGAAATGGATTCTTGTCCAAGTTATCCAACTCTGTCATGGAGGGGCAAACAAAATGGGATCCAGTCTGCTTGAAAACATCAGATGAGGTACGGCAAATTTACAGCCAAATGAAGCTTCTTGACCAGCGAGTGAGTGCTGTATCAGTTGTATCTGTACTTGAAGCTGAGCTAGAGCAGGCTCGAGCTCGCATTCAGGAGCTTGAGATGGAACGGCGTTCCTCAAAAAAGAAACTTGAGCACTTCTTAAGGAATGTCAGTGAGGAAAGAGTTTCATGGAGGAGCAGAGAGCATGAGAAAGTCCGTGCATTTATTGATGACATCAAGTCTGAATTGAACCAGGAACGGAAGAGTCGTCAGAGAACTGAGATACTCAATTCCAAATTGGTTAATGAGCTTGCTGATGTCAAGTTATCAGCAAAGCGATACATGCAGGACTACGAGAAAGAAAGAAAGGCCAGAGAATTAATTGAGGAAGTATGTGATGAGCTTGCTAAGGAAATTGGAGAAGACAAGGCTGAAGTTGAAGCATTGAAGAGAGAATCCATGAAACTCAGAGAGGAAGTGGACGAGGAAAGGAAGATGTTGCAGATGGCGGAAGTCTGGCGGGAGGAACGTGTCCAAATGAAGCTTGTTGATGCAAAGGTGGCAGTTGAGGAGAGGTATTCTCTGATGAACAAGCTTGTGGCAGATCTGGAGAATTTTCTGACATCAAGAAGTGTAACGCCAGATGTGAAGGAAATGAGAGAAGTAGAGTATCTGCGACAGGCTGCTGCTGCTGTAAATATTCAAGAAGTCAAGGACTTTTCTTATGAACCCCCAAATCCTGATGATATCTTTTCTGTGTTCGAAGAAGTTAATTTCGGTGAGCCTAATGAGAGGGAGATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

464

Amino Acids

53.38

Weight (kDa)

8.99

Isoelectric Point (pI)

53.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009527)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50660
fragaria_vesca	FvH4_3g22650 FvH4_3g22650 FvH4_3g22650 FvH4_3g22650 FvH4_3g22650
malus_domestica	MD03G1201300.v1.1 MD11G1218700.v1.1
prunus_persica	Prupe.4G212500_v2.0.a1
pyrus_communis	pycom03g15260 pycom11g19260
rosa_chinensis	RchiOBHm_Chr5g0039421
rosa_laevigata	RLG00000033913
rosa_multiflora	Rmu_co8501983.1_g000001
rosa_roxburghii	Rroxscaffold_1G00040560 Rroxscaffold_1G00041790
rosa_rugosa	Rorug05G0179100
rosa_samantha	Rh5AG265700 Rh5BG270300 Rh5CG303300 Rh5DG278300
rosa_wichuraiana	Rw5G024900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	424
AccB1I	GGYRCC	2 cut(s)	103, 424
AccI	GTMKAC	1 cut(s)	370
AciI	CCGC	9 cut(s)	22, 47, 88, 127, 151, 327, 340, 1097, 1108
AclWI	GGATC	3 cut(s)	66, 557, 570
AcoI	YGGCCR	4 cut(s)	312, 324, 385, 412
AcsI	RAATTY	2 cut(s)	600, 1201
AcuI	CTGAAG	3 cut(s)	270, 486, 1041
AcyI	GRCGYC	1 cut(s)	167
AfaI	GTAC	3 cut(s)	426, 594, 660
AfiI	CCNNNNNNNGG	6 cut(s)	49, 253, 336, 359, 410, 421
AflII	CTTAAG	1 cut(s)	748
AflIII	ACRYGT	1 cut(s)	1117
AgsI	TTSAA	7 cut(s)	124, 577, 665, 838, 1028, 1036, 1292
AhdI	GACNNNNNGTC	1 cut(s)	826
AjnI	CCWGG	3 cut(s)	210, 314, 840
AjuI	GAANNNNNNNTTGG	2 cut(s)	603, 635
Alw21I	GWGCWC	2 cut(s)	691, 744
Alw26I	GTCTC	1 cut(s)	158
AlwI	GGATC	3 cut(s)	66, 557, 570
Ama87I	CYCGRG	3 cut(s)	99, 161, 684
AoxI	GGCC	8 cut(s)	129, 196, 300, 312, 324, 385, 412, 957
ApeKI	GCWGC	4 cut(s)	343, 1271, 1274, 1277
ApoI	RAATTY	2 cut(s)	600, 1201
AseI	ATTAAT	1 cut(s)	968
Asp718I	GGTACC	1 cut(s)	424
AspA2I	CCTAGG	1 cut(s)	491
AspLEI	GCGC	1 cut(s)	210
AspS9I	GGNCC	5 cut(s)	115, 129, 197, 235, 495
AsuC2I	CCSGG	4 cut(s)	100, 101, 108, 375
AsuHPI	GGTGA	3 cut(s)	24, 56, 1379
AsuII	TTCGAA	1 cut(s)	1350
AvaI	CYCGRG	3 cut(s)	99, 161, 684
AvaII	GGWCC	3 cut(s)	115, 235, 495
AvrII	CCTAGG	1 cut(s)	491
BaeGI	GKGCMC	2 cut(s)	106, 219
BalI	TGGCCA	2 cut(s)	387, 414
BamHI	GGATCC	1 cut(s)	562
BanI	GGYRCC	2 cut(s)	103, 424
BanII	GRGCYC	1 cut(s)	691
BbsI	GAAGAC	2 cut(s)	101, 1017
Bbv12I	GWGCWC	2 cut(s)	691, 744
BbvI	GCAGC	4 cut(s)	330, 1258, 1261, 1264
BccI	CCATC	3 cut(s)	352, 703, 1087
BceAI	ACGGC	2 cut(s)	611, 731
BcgI	CGANNNNNNTGC	2 cut(s)	93, 127
BciT130I	CCWGG	3 cut(s)	212, 316, 842
BcnI	CCSGG	4 cut(s)	100, 101, 108, 375
BcoDI	GTCTC	1 cut(s)	158
BfaI	CTAG	3 cut(s)	392, 492, 674
BfmI	CTRYAG	1 cut(s)	344
BfoI	RGCGCY	1 cut(s)	211
BfrI	CTTAAG	1 cut(s)	748
BglII	AGATCT	1 cut(s)	1192
BisI	GCNGC	6 cut(s)	327, 341, 344, 1272, 1275, 1278
BlnI	CCTAGG	1 cut(s)	491
BlpI	GCTNAGC	1 cut(s)	669
BlsI	GCNGC	6 cut(s)	328, 342, 345, 1273, 1276, 1279
Bme1390I	CCNGG	7 cut(s)	100, 101, 108, 212, 316, 375, 842
Bme18I	GGWCC	3 cut(s)	115, 235, 495
BmeRI	GACNNNNNGTC	1 cut(s)	826
BmeT110I	CYCGRG	3 cut(s)	99, 161, 684
BmgT120I	GGNCC	5 cut(s)	115, 129, 197, 235, 495
BmiI	GGNNCC	7 cut(s)	105, 155, 199, 236, 364, 426, 564
BmrFI	CCNGG	7 cut(s)	100, 101, 108, 212, 316, 375, 842
BmsI	GCATC	1 cut(s)	1129
BpiI	GAAGAC	2 cut(s)	101, 1017
BplI	GAGNNNNNCTC	2 cut(s)	1153, 1185
BpmI	CTGGAG	1 cut(s)	1217
Bpu10I	CCTNAGC	1 cut(s)	996
Bpu1102I	GCTNAGC	1 cut(s)	669
Bpu14I	TTCGAA	1 cut(s)	1350
BpuEI	CTTGAG	4 cut(s)	161, 487, 725, 758
BpuMI	CCSGG	4 cut(s)	100, 101, 108, 375
BsaHI	GRCGYC	1 cut(s)	167
BsaJI	CCNNGG	4 cut(s)	99, 193, 211, 491
BsaWI	WCCGGW	2 cut(s)	117, 365
BsaXI	ACNNNNNCTCC	2 cut(s)	417, 447
Bsc4I	CCNNNNNNNGG	6 cut(s)	49, 253, 336, 359, 410, 421
Bse1I	ACTGG	1 cut(s)	566
BseBI	CCWGG	3 cut(s)	212, 316, 842
BseDI	CCNNGG	4 cut(s)	99, 193, 211, 491
BseLI	CCNNNNNNNGG	6 cut(s)	49, 253, 336, 359, 410, 421
BseMII	CTCAG	3 cut(s)	660, 858, 1069
BseNI	ACTGG	1 cut(s)	566
BseRI	GAGGAG	4 cut(s)	269, 289, 796, 1172
BseSI	GKGCMC	2 cut(s)	106, 219
BseXI	GCAGC	4 cut(s)	330, 1258, 1261, 1264
BseYI	CCCAGC	1 cut(s)	11
BshFI	GGCC	8 cut(s)	131, 198, 302, 314, 326, 387, 414, 959
BshNI	GGYRCC	2 cut(s)	103, 424
BsiHKAI	GWGCWC	2 cut(s)	691, 744
BsiHKCI	CYCGRG	3 cut(s)	99, 161, 684
BsiSI	CCGG	9 cut(s)	50, 100, 108, 118, 132, 330, 353, 366, 374
BslFI	GGGAC	2 cut(s)	248, 390
BslI	CCNNNNNNNGG	6 cut(s)	49, 253, 336, 359, 410, 421
BsmAI	GTCTC	1 cut(s)	158
BsmBI	CGTCTC	1 cut(s)	158
BsmFI	GGGAC	2 cut(s)	248, 390
BsmI	GAATGC	1 cut(s)	693
BsnI	GGCC	8 cut(s)	131, 198, 302, 314, 326, 387, 414, 959
BsoBI	CYCGRG	3 cut(s)	99, 161, 684
Bsp119I	TTCGAA	1 cut(s)	1350
Bsp1286I	GDGCHC	4 cut(s)	106, 219, 691, 744
Bsp143I	GATC	5 cut(s)	58, 186, 475, 562, 1192
Bsp1720I	GCTNAGC	1 cut(s)	669
BspACI	CCGC	9 cut(s)	22, 47, 88, 127, 151, 327, 340, 1097, 1108
BspANI	GGCC	8 cut(s)	131, 198, 302, 314, 326, 387, 414, 959
BspCNI	CTCAG	3 cut(s)	661, 859, 1068
BspLI	GGNNCC	7 cut(s)	105, 155, 199, 236, 364, 426, 564
BspMAI	CTGCAG	1 cut(s)	348
BspPI	GGATC	3 cut(s)	66, 557, 570
BspQI	GCTCTTC	1 cut(s)	198
BspT104I	TTCGAA	1 cut(s)	1350
BspT107I	GGYRCC	2 cut(s)	103, 424
BspTI	CTTAAG	1 cut(s)	748
BsrI	ACTGG	1 cut(s)	566
BssECI	CCNNGG	4 cut(s)	99, 193, 211, 491
BssMI	GATC	5 cut(s)	58, 186, 475, 562, 1192
BssNAI	GTATAC	1 cut(s)	371
BssNI	GRCGYC	1 cut(s)	167
BssT1I	CCWWGG	2 cut(s)	193, 491
Bst1107I	GTATAC	1 cut(s)	371
Bst2UI	CCWGG	3 cut(s)	212, 316, 842
Bst4CI	ACNGT	2 cut(s)	336, 449
Bst6I	CTCTTC	4 cut(s)	198, 246, 845, 1031
BstACI	GRCGYC	1 cut(s)	167
BstAFI	CTTAAG	1 cut(s)	748
BstBI	TTCGAA	1 cut(s)	1350
BstC8I	GCNNGC	7 cut(s)	17, 129, 389, 681, 691, 900, 993
BstDEI	CTNAG	4 cut(s)	669, 867, 996, 1055
BstH2I	RGCGCY	1 cut(s)	211
BstHHI	GCGC	1 cut(s)	210
BstKTI	GATC	5 cut(s)	61, 189, 478, 565, 1195
BstMAI	GTCTC	1 cut(s)	158
BstMBI	GATC	5 cut(s)	58, 186, 475, 562, 1192
BstMWI	GCNNNNNNNGC	7 cut(s)	21, 214, 349, 467, 931, 1148, 1277
BstNI	CCWGG	3 cut(s)	212, 316, 842
BstNSI	RCATGY	1 cut(s)	934
BstSCI	CCNGG	7 cut(s)	98, 99, 106, 210, 314, 373, 840
BstSFI	CTRYAG	1 cut(s)	344
BstSLI	GKGCMC	2 cut(s)	106, 219
BstV1I	GCAGC	4 cut(s)	330, 1258, 1261, 1264
BstV2I	GAAGAC	2 cut(s)	101, 1017
BstX2I	RGATCY	3 cut(s)	58, 562, 1192
BstXI	CCANNNNNNTGG	1 cut(s)	322
BstYI	RGATCY	3 cut(s)	58, 562, 1192
BstZ17I	GTATAC	1 cut(s)	371
BsuRI	GGCC	8 cut(s)	131, 198, 302, 314, 326, 387, 414, 959
BtsIMutI	CAGTG	1 cut(s)	766
Cac8I	GCNNGC	7 cut(s)	17, 129, 389, 681, 691, 900, 993
CfoI	GCGC	1 cut(s)	210
Cfr13I	GGNCC	5 cut(s)	115, 129, 197, 235, 495
Cfr9I	CCCGGG	1 cut(s)	99
CpoI	CGGWCCG	1 cut(s)	115
CseI	GACGC	1 cut(s)	175
Csp6I	GTAC	3 cut(s)	425, 593, 659
CspI	CGGWCCG	1 cut(s)	115
CviAII	CATG	5 cut(s)	541, 777, 794, 931, 1048
CviQI	GTAC	3 cut(s)	425, 593, 659
DdeI	CTNAG	4 cut(s)	669, 867, 996, 1055
DpnI	GATC	5 cut(s)	60, 188, 477, 564, 1194
DpnII	GATC	5 cut(s)	58, 186, 475, 562, 1192
DriI	GACNNNNNGTC	1 cut(s)	826
EaeI	YGGCCR	4 cut(s)	312, 324, 385, 412
Eam1104I	CTCTTC	4 cut(s)	198, 246, 845, 1031
Eam1105I	GACNNNNNGTC	1 cut(s)	826
EarI	CTCTTC	4 cut(s)	198, 246, 845, 1031
EciI	GGCGGA	1 cut(s)	1112
Ecl136II	GAGCTC	1 cut(s)	689
Eco130I	CCWWGG	2 cut(s)	193, 491
Eco147I	AGGCCT	1 cut(s)	302
Eco24I	GRGCYC	1 cut(s)	691
Eco32I	GATATC	1 cut(s)	1336
Eco47I	GGWCC	3 cut(s)	115, 235, 495
Eco53kI	GAGCTC	1 cut(s)	689
Eco57I	CTGAAG	3 cut(s)	270, 486, 1041
Eco88I	CYCGRG	3 cut(s)	99, 161, 684
EcoICRI	GAGCTC	1 cut(s)	689
EcoO109I	RGGNCCY	1 cut(s)	197
EcoRII	CCWGG	3 cut(s)	210, 314, 840
EcoRV	GATATC	1 cut(s)	1336
EcoT14I	CCWWGG	2 cut(s)	193, 491
EcoT38I	GRGCYC	1 cut(s)	691
ErhI	CCWWGG	2 cut(s)	193, 491
Esp3I	CGTCTC	1 cut(s)	158
FaeI	CATG	5 cut(s)	544, 780, 797, 934, 1051
FaqI	GGGAC	2 cut(s)	248, 390
FatI	CATG	5 cut(s)	540, 776, 793, 930, 1047
FauI	CCCGC	4 cut(s)	29, 95, 120, 1101
FauNDI	CATATG	1 cut(s)	457
FblI	GTMKAC	1 cut(s)	370
Fnu4HI	GCNGC	6 cut(s)	327, 341, 344, 1272, 1275, 1278
FriOI	GRGCYC	1 cut(s)	691
Fsp4HI	GCNGC	6 cut(s)	327, 341, 344, 1272, 1275, 1278
FspBI	CTAG	3 cut(s)	392, 492, 674
GlaI	GCGC	1 cut(s)	209
GluI	GCNGC	6 cut(s)	327, 341, 344, 1272, 1275, 1278
GsaI	CCCAGC	1 cut(s)	15
GsuI	CTGGAG	1 cut(s)	1217
HaeII	RGCGCY	1 cut(s)	211
HaeIII	GGCC	8 cut(s)	131, 198, 302, 314, 326, 387, 414, 959
HapII	CCGG	9 cut(s)	50, 100, 108, 118, 132, 330, 353, 366, 374
HgaI	GACGC	1 cut(s)	175
HhaI	GCGC	1 cut(s)	210
Hin1I	GRCGYC	1 cut(s)	167
Hin1II	CATG	5 cut(s)	544, 780, 797, 934, 1051
Hin6I	GCGC	1 cut(s)	208
HinP1I	GCGC	1 cut(s)	208
HindIII	AAGCTT	3 cut(s)	617, 1130, 1181
HinfI	GANTC	4 cut(s)	53, 513, 853, 1043
HpaII	CCGG	9 cut(s)	50, 100, 108, 118, 132, 330, 353, 366, 374
HphI	GGTGA	3 cut(s)	24, 56, 1379
Hpy166II	GTNNAC	4 cut(s)	265, 371, 498, 1069
Hpy188I	TCNGA	9 cut(s)	58, 141, 466, 586, 832, 861, 1058, 1173, 1209
Hpy188III	TCNNGA	7 cut(s)	504, 623, 698, 1196, 1215, 1292, 1328
Hpy8I	GTNNAC	4 cut(s)	265, 371, 498, 1069
HpyAV	CCTTC	4 cut(s)	225, 274, 283, 1231
HpyCH4III	ACNGT	2 cut(s)	336, 449
HpyCH4IV	ACGT	1 cut(s)	1117
HpyCH4V	TGCA	5 cut(s)	346, 809, 934, 1090, 1142
HpyF10VI	GCNNNNNNNGC	7 cut(s)	21, 214, 349, 467, 931, 1148, 1277
HpyF3I	CTNAG	4 cut(s)	669, 867, 996, 1055
HpySE526I	ACGT	1 cut(s)	1117
Hsp92I	GRCGYC	1 cut(s)	167
Hsp92II	CATG	5 cut(s)	544, 780, 797, 934, 1051
HspAI	GCGC	1 cut(s)	208
KpnI	GGTACC	1 cut(s)	428
Kzo9I	GATC	5 cut(s)	58, 186, 475, 562, 1192
LguI	GCTCTTC	1 cut(s)	198
LmnI	GCTCC	3 cut(s)	153, 700, 783
Lsp1109I	GCAGC	4 cut(s)	330, 1258, 1261, 1264
LweI	GCATC	1 cut(s)	1129
MaeI	CTAG	3 cut(s)	392, 492, 674
MaeII	ACGT	1 cut(s)	1117
MaeIII	GTNAC	1 cut(s)	1222
MalI	GATC	5 cut(s)	60, 188, 477, 564, 1194
MboI	GATC	5 cut(s)	58, 186, 475, 562, 1192
MflI	RGATCY	3 cut(s)	58, 562, 1192
MhlI	GDGCHC	4 cut(s)	106, 219, 691, 744
MlsI	TGGCCA	2 cut(s)	387, 414
MluCI	AATT	9 cut(s)	600, 833, 877, 884, 965, 969, 1002, 1201, 1360
MluNI	TGGCCA	2 cut(s)	387, 414
MlyI	GAGTC	2 cut(s)	47, 862
MmeI	TCCRAC	2 cut(s)	164, 555
Mox20I	TGGCCA	2 cut(s)	387, 414
MscI	TGGCCA	2 cut(s)	387, 414
MseI	TTAA	4 cut(s)	749, 891, 968, 1359
Msp20I	TGGCCA	2 cut(s)	387, 414
MspCI	CTTAAG	1 cut(s)	748
MspI	CCGG	9 cut(s)	50, 100, 108, 118, 132, 330, 353, 366, 374
MspR9I	CCNGG	7 cut(s)	100, 101, 108, 212, 316, 375, 842
Mva1269I	GAATGC	1 cut(s)	693
MvaI	CCWGG	3 cut(s)	212, 316, 842
MwoI	GCNNNNNNNGC	7 cut(s)	21, 214, 349, 467, 931, 1148, 1277
NciI	CCSGG	4 cut(s)	100, 101, 108, 375
NdeI	CATATG	1 cut(s)	457
NdeII	GATC	5 cut(s)	58, 186, 475, 562, 1192
NlaIII	CATG	5 cut(s)	544, 780, 797, 934, 1051
NlaIV	GGNNCC	7 cut(s)	105, 155, 199, 236, 364, 426, 564
NspI	RCATGY	1 cut(s)	934
NspV	TTCGAA	1 cut(s)	1350
PaeR7I	CTCGAG	1 cut(s)	684
PceI	AGGCCT	1 cut(s)	302
PciSI	GCTCTTC	1 cut(s)	198
PcsI	WCGNNNNNNNCGW	1 cut(s)	853
PctI	GAATGC	1 cut(s)	693
PfeI	GAWTC	2 cut(s)	513, 1043
PkrI	GCNGC	6 cut(s)	328, 342, 345, 1273, 1276, 1279
PleI	GAGTC	2 cut(s)	47, 861
PpsI	GAGTC	2 cut(s)	47, 861
PshBI	ATTAAT	1 cut(s)	968
Psp124BI	GAGCTC	1 cut(s)	691
Psp6I	CCWGG	3 cut(s)	210, 314, 840
PspFI	CCCAGC	1 cut(s)	11
PspGI	CCWGG	3 cut(s)	210, 314, 840
PspN4I	GGNNCC	7 cut(s)	105, 155, 199, 236, 364, 426, 564
PspPI	GGNCC	5 cut(s)	115, 129, 197, 235, 495
PspXI	VCTCGAGB	1 cut(s)	684
PstI	CTGCAG	1 cut(s)	348
PsuI	RGATCY	3 cut(s)	58, 562, 1192
RsaI	GTAC	3 cut(s)	426, 594, 660
RsaNI	GTAC	3 cut(s)	425, 593, 659
Rsr2I	CGGWCCG	1 cut(s)	115
RsrII	CGGWCCG	1 cut(s)	115
SacI	GAGCTC	1 cut(s)	691
SapI	GCTCTTC	1 cut(s)	198
SaqAI	TTAA	4 cut(s)	749, 891, 968, 1359
SatI	GCNGC	6 cut(s)	327, 341, 344, 1272, 1275, 1278
Sau3AI	GATC	5 cut(s)	58, 186, 475, 562, 1192
Sau96I	GGNCC	5 cut(s)	115, 129, 197, 235, 495
SchI	GAGTC	2 cut(s)	47, 862
ScrFI	CCNGG	7 cut(s)	100, 101, 108, 212, 316, 375, 842
SduI	GDGCHC	4 cut(s)	106, 219, 691, 744
SfaNI	GCATC	1 cut(s)	1129
SfcI	CTRYAG	1 cut(s)	344
Sfr274I	CTCGAG	1 cut(s)	684
SfuI	TTCGAA	1 cut(s)	1350
SinI	GGWCC	3 cut(s)	115, 235, 495
SlaI	CTCGAG	1 cut(s)	684
SmaI	CCCGGG	1 cut(s)	101
SmlI	CTYRAG	6 cut(s)	176, 502, 684, 704, 737, 748
SmoI	CTYRAG	6 cut(s)	176, 502, 684, 704, 737, 748
Sse9I	AATT	9 cut(s)	600, 833, 877, 884, 965, 969, 1002, 1201, 1360
SseBI	AGGCCT	1 cut(s)	302
SsiI	CCGC	9 cut(s)	22, 47, 88, 127, 151, 327, 340, 1097, 1108
SspI	AATATT	1 cut(s)	1288
SspMI	CTAG	3 cut(s)	392, 492, 674
SstI	GAGCTC	1 cut(s)	691
StuI	AGGCCT	1 cut(s)	302
StyD4I	CCNGG	7 cut(s)	98, 99, 106, 210, 314, 373, 840
StyI	CCWWGG	2 cut(s)	193, 491
TaaI	ACNGT	2 cut(s)	336, 449
TaiI	ACGT	1 cut(s)	1120
TaqI	TCGA	3 cut(s)	189, 685, 1350
TaqII	GACCGA	1 cut(s)	103
TasI	AATT	9 cut(s)	600, 833, 877, 884, 965, 969, 1002, 1201, 1360
TatI	WGTACW	1 cut(s)	658
TauI	GCSGC	2 cut(s)	329, 343
TfiI	GAWTC	2 cut(s)	513, 1043
Tru1I	TTAA	4 cut(s)	749, 891, 968, 1359
Tru9I	TTAA	4 cut(s)	749, 891, 968, 1359
TscAI	CASTG	1 cut(s)	766
TseI	GCWGC	4 cut(s)	343, 1271, 1274, 1277
TspDTI	ATGAA	7 cut(s)	17, 629, 765, 1064, 1142, 1190, 1329
TspGWI	ACGGA	5 cut(s)	282, 394, 425, 794, 862
TspMI	CCCGGG	1 cut(s)	99
TspRI	CASTG	1 cut(s)	766
Vha464I	CTTAAG	1 cut(s)	748
VpaK11BI	GGWCC	3 cut(s)	115, 235, 495
VspI	ATTAAT	1 cut(s)	968
XapI	RAATTY	2 cut(s)	600, 1201
XceI	RCATGY	1 cut(s)	934
XcmI	CCANNNNNNNNNTGG	1 cut(s)	538
XhoI	CTCGAG	1 cut(s)	684
XmaI	CCCGGG	1 cut(s)	99
XmaJI	CCTAGG	1 cut(s)	491
XmiI	GTMKAC	1 cut(s)	370
XspI	CTAG	3 cut(s)	392, 492, 674

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.