Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0009527

Physical Location & Seq

Genomic Coordinates Forward (+)

33684937 .. 33688588

Gene Structure 3652 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG270300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2058 bp

ATGAAGAAGCCCAGCAAGCCGACATTCCCACTACCGGACTCGGATCTTCAGCCGGAGCGGCCGCCCAGCAGGAGGAGAGCCCGGGGCTCGGGTTTGCCCCGGCTCAAGCGGGCCGGGCTGCCCACCGGGAAACGGAGCCGGCCCGAGACGCCTTTACTCAAGTGGAAGATCGAGGATACCGAGGAGGAGAACGGGAAGGAGAGGCGCAAAGACCAAAATGACCTTGACGAGGAGGAGAGAGAAGAGGGAGGAGGAGGAGCAGCGAGGAGGAAGGGCAAGAAGGGGAGAGAGGTGCCCATGTCGGCCAGGAAGCTCGCCGCCGGACTCTGGAGGCTACAGTTGCCGGAGACCCGCGCCGAGAGACGGAGTGCCCAGCAGCTAGGGTTTCAGCCTGATGCAGGCCATATTGGAGCACCATTTCTCCGCCAACGCAATAGCAAAGGATTTGCTTCTGAAGCAAAGGATAATTTACAAAGCCCTGGAACCACCTCAAGGAATGGATTCTTGCGCAAGTTATCCAACTCTGTCATGGAAGGTGCAACAAAATGGGATCCTGTCTGCTTAAAATCATCCGAAGAGGTACGCCAGATTTACAGCCAAATGAAGCTTCTTGACCAGCAAGCGTCTGCTGTATCAGTGGTAAATGTACTTGAATCTGAATTAGAGCAGGCTCGAGCCCGCATTCAGGAGCTTGAGTTGGAGCGGCGTTCCTCAAAAAAGAAACTCGAACACTTCTTGAGGAATATGAATGAGGAAAAGGTTGCATGGCGGAGCAGAGAGCATGAGAAAATTCGTGCATTTATCGATGACATCAAGGTTGAATTGAACCGGGAAAGGAAGAGTCGTCAGAGAACTGAAATACTCAATTCCAAATTGGTTAATGAGCTTGCTGATGCTAAGTTATCTGCAAAGCGATACATGCAGGACTATGAAAAAGAAAGAAAGGCAAGAGAATTAATTGAGGAAGTATGTGATGAGCTTGCTAAGGAAATTGGAGAAGACAAGGCTGAAGTTGAAGCATTAAAGAGAGAATCTATGAAACTCAGAGATGACGTGGAAGAGGAAAGGAAGATGTTGCAGATGGCTGAGGTCTGGCGTGAGGAACGTGTTCAAATGAAGCTGGTTGACGCAAAGGTGGCAGTTGAGGAGAAGTATTCTCTGATGAACAAGCTTGTGGCAGATCTTGAGAATTTTTTGAAGTCAAGAAGTTCAACCCCAGATGTGAAGGAAATGAGAGAAGGAGAGTTTCTTCGACAGGTTGCTGCCACTGTAAACATTCAAGACGTCAAGGACTTTTCTTATGAACCCCCCAATCCTGATGATATCTTTTCCGTGTTTGAAGAAGTTAATTTTGGTGAGCCTAATGAGAGGGAGATTGAACAGTGTGTTGCTTACAGTCCTGCTAGTCATGCTTCCAAAATTCGTACTGTGAGTCCTGAAGCTAATGGAATCGATAAAAACCGGATCCAGAGGCACGCAATTGCATATGTTGGTGAGAATGGTGACATAGAAGAAGATGAGAGTGGATGGGAAACTGTGAGCCATCTTGAGGATCAGGACTCAAGCTATTCACCAGACGGGAGTGCCCCATCGGTCAATAAGAATCACCGAGAGAGTAATGTCACAGATAGTGGAACCGAATGGGAAGAAGAAAATGATGGGGAGGAAACACCAATTACCGAAATCAGTGAGGTTTGCTCGGTGCCAATAAAGCAGTCGAAGAAGGTATCAAGTATAGCAAGGCTTTGGAGATCTGGCCCAAATAATGAAGACAACTACAAGATTATCTCGGTAGAAGGAATAAACGGTAGGCTCTCAAATGGAAGGATATCCAAAGGGGATATTTTGTCTCCGGATCGAGGTTCAGGTAAAGGTGGTTTTAGCCCCTCTGATTTGGGGCAGTGGAGTTCACCAGACTCTGGGAATCATCATATTCGGGGTATGAAAGGGTGCATCCCTCTTGGTGCGCAGAAGAACAGTTTGAAGGCAAGACTTTTGGAGGCAAGGTTGGACAGTCAAAAAGTTCAACTGCGTCATGTGCTTAAACAGAAGATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

685

Amino Acids

77.77

Weight (kDa)

6.65

Isoelectric Point (pI)

59.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009527)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50660
fragaria_vesca	FvH4_3g22650 FvH4_3g22650 FvH4_3g22650 FvH4_3g22650 FvH4_3g22650
malus_domestica	MD03G1201300.v1.1 MD11G1218700.v1.1
prunus_persica	Prupe.4G212500_v2.0.a1
pyrus_communis	pycom03g15260 pycom11g19260
rosa_chinensis	RchiOBHm_Chr5g0039421
rosa_laevigata	RLG00000033913
rosa_multiflora	Rmu_co8501983.1_g000001
rosa_roxburghii	Rroxscaffold_1G00040560 Rroxscaffold_1G00041790
rosa_rugosa	Rorug05G0179100
rosa_samantha	Rh5AG265700 Rh5BG270300 Rh5CG303300 Rh5DG278300
rosa_wichuraiana	Rw5G024900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1287
Acc16I	TGCGCA	2 cut(s)	509, 1968
AccB1I	GGYRCC	2 cut(s)	292, 1702
AccB7I	CCANNNNNTGG	1 cut(s)	1919
AccBSI	CCGCTC	2 cut(s)	58, 703
AccII	CGCG	1 cut(s)	354
AccIII	TCCGGA	1 cut(s)	1852
AciI	CCGC	9 cut(s)	58, 62, 109, 318, 352, 424, 679, 703, 769
AclWI	GGATC	7 cut(s)	51, 545, 558, 1459, 1472, 1560, 1863
AcoI	YGGCCR	2 cut(s)	59, 303
AcsI	RAATTY	3 cut(s)	789, 1189, 1419
AcuI	CTGAAG	4 cut(s)	32, 474, 1029, 1458
AcyI	GRCGYC	2 cut(s)	149, 1284
AfaI	GTAC	3 cut(s)	582, 648, 1426
AflIII	ACRYGT	1 cut(s)	1105
AjiI	CACGTC	1 cut(s)	1054
AjnI	CCWGG	2 cut(s)	305, 478
AjuI	GAANNNNNNNTTGG	4 cut(s)	591, 623, 1335, 1367
Alw21I	GWGCWC	1 cut(s)	415
Alw26I	GTCTC	4 cut(s)	140, 341, 355, 1854
AlwI	GGATC	7 cut(s)	51, 545, 558, 1459, 1472, 1560, 1863
AlwNI	CAGNNNCTG	1 cut(s)	1919
Ama87I	CYCGRG	4 cut(s)	81, 88, 143, 672
Aor13HI	TCCGGA	1 cut(s)	1852
AoxI	GGCC	6 cut(s)	59, 111, 140, 303, 400, 1756
ApeKI	GCWGC	4 cut(s)	118, 260, 376, 1262
ApoI	RAATTY	3 cut(s)	789, 1189, 1419
AseI	ATTAAT	1 cut(s)	956
Asp700I	GAANNNNTTC	2 cut(s)	500, 1107
AspLEI	GCGC	4 cut(s)	207, 356, 510, 1969
AspS9I	GGNCC	3 cut(s)	111, 141, 1757
AsuC2I	CCSGG	6 cut(s)	82, 83, 100, 115, 127, 830
AsuHPI	GGTGA	6 cut(s)	1367, 1505, 1514, 1563, 1598, 1902
AvaI	CYCGRG	4 cut(s)	81, 88, 143, 672
BaeGI	GKGCMC	3 cut(s)	297, 373, 1588
BamHI	GGATCC	2 cut(s)	550, 1464
BanI	GGYRCC	2 cut(s)	292, 1702
BanII	GRGCYC	3 cut(s)	82, 89, 679
BbsI	GAAGAC	2 cut(s)	1005, 1776
Bbv12I	GWGCWC	1 cut(s)	415
BbvCI	CCTCAGC	1 cut(s)	1086
BbvI	GCAGC	4 cut(s)	105, 272, 388, 1249
BccI	CCATC	5 cut(s)	1075, 1521, 1551, 1597, 1652
BciT130I	CCWGG	2 cut(s)	307, 480
BciVI	GTATCC	1 cut(s)	169
BcnI	CCSGG	6 cut(s)	82, 83, 100, 115, 127, 830
BcoDI	GTCTC	4 cut(s)	140, 341, 355, 1854
BfaI	CTAG	3 cut(s)	380, 1404, 2056
BfmI	CTRYAG	1 cut(s)	335
BfuI	GTATCC	1 cut(s)	169
BglI	GCCNNNNNGGC	1 cut(s)	58
BglII	AGATCT	3 cut(s)	1180, 1751, 2052
BisI	GCNGC	8 cut(s)	59, 62, 119, 261, 318, 377, 704, 1263
BlsI	GCNGC	8 cut(s)	60, 63, 120, 262, 319, 378, 705, 1264
Bme1390I	CCNGG	8 cut(s)	82, 83, 100, 115, 127, 307, 480, 830
BmeT110I	CYCGRG	4 cut(s)	81, 88, 143, 672
BmgBI	CACGTC	1 cut(s)	1054
BmgT120I	GGNCC	3 cut(s)	111, 141, 1757
BmiI	GGNNCC	7 cut(s)	137, 294, 484, 552, 1466, 1636, 1704
BmrFI	CCNGG	8 cut(s)	82, 83, 100, 115, 127, 307, 480, 830
BmsI	GCATC	3 cut(s)	385, 883, 1962
BpiI	GAAGAC	2 cut(s)	1005, 1776
BplI	GAGNNNNNCTC	2 cut(s)	1682, 1714
BpmI	CTGGAG	1 cut(s)	349
Bpu10I	CCTNAGC	2 cut(s)	984, 1086
BpuEI	CTTGAG	8 cut(s)	89, 143, 475, 713, 757, 1205, 1546, 1568
BpuMI	CCSGG	6 cut(s)	82, 83, 100, 115, 127, 830
Bsa29I	ATCGAT	2 cut(s)	804, 1452
BsaHI	GRCGYC	2 cut(s)	149, 1284
BsaI	GGTCTC	1 cut(s)	341
BsaJI	CCNNGG	5 cut(s)	81, 82, 98, 180, 478
BsaWI	WCCGGW	3 cut(s)	34, 1461, 1852
BsaXI	ACNNNNNCTCC	6 cut(s)	405, 435, 680, 710, 1991, 2021
Bse118I	RCCGGY	1 cut(s)	138
BseAI	TCCGGA	1 cut(s)	1852
BseBI	CCWGG	2 cut(s)	307, 480
BseCI	ATCGAT	2 cut(s)	804, 1452
BseDI	CCNNGG	5 cut(s)	81, 82, 98, 180, 478
BseGI	GGATG	3 cut(s)	569, 1532, 1953
BseMII	CTCAG	2 cut(s)	1057, 1077
BseSI	GKGCMC	3 cut(s)	297, 373, 1588
BseX3I	CGGCCG	1 cut(s)	59
BseXI	GCAGC	4 cut(s)	105, 272, 388, 1249
BseYI	CCCAGC	3 cut(s)	11, 65, 372
Bsh1236I	CGCG	1 cut(s)	354
Bsh1285I	CGRYCG	1 cut(s)	62
BshFI	GGCC	6 cut(s)	61, 113, 142, 305, 402, 1758
BshNI	GGYRCC	2 cut(s)	292, 1702
BshVI	ATCGAT	2 cut(s)	804, 1452
BsiEI	CGRYCG	1 cut(s)	62
BsiHKAI	GWGCWC	1 cut(s)	415
BsiHKCI	CYCGRG	4 cut(s)	81, 88, 143, 672
BsmAI	GTCTC	4 cut(s)	140, 341, 355, 1854
BsmBI	CGTCTC	2 cut(s)	140, 355
BsmI	GAATGC	1 cut(s)	681
BsnI	GGCC	6 cut(s)	61, 113, 142, 305, 402, 1758
Bso31I	GGTCTC	1 cut(s)	341
BsoBI	CYCGRG	4 cut(s)	81, 88, 143, 672
Bsp1286I	GDGCHC	7 cut(s)	82, 89, 297, 373, 415, 679, 1588
Bsp13I	TCCGGA	1 cut(s)	1852
Bsp143I	GATC	9 cut(s)	43, 168, 550, 1180, 1464, 1552, 1751, 1855, 2052
BspACI	CCGC	9 cut(s)	58, 62, 109, 318, 352, 424, 679, 703, 769
BspANI	GGCC	6 cut(s)	61, 113, 142, 305, 402, 1758
BspCNI	CTCAG	2 cut(s)	1056, 1078
BspDI	ATCGAT	2 cut(s)	804, 1452
BspEI	TCCGGA	1 cut(s)	1852
BspFNI	CGCG	1 cut(s)	354
BspLI	GGNNCC	7 cut(s)	137, 294, 484, 552, 1466, 1636, 1704
BspPI	GGATC	7 cut(s)	51, 545, 558, 1459, 1472, 1560, 1863
BspT107I	GGYRCC	2 cut(s)	292, 1702
BspTNI	GGTCTC	1 cut(s)	341
BsrBI	CCGCTC	2 cut(s)	58, 703
BsrFI	RCCGGY	1 cut(s)	138
BssAI	RCCGGY	1 cut(s)	138
BssECI	CCNNGG	5 cut(s)	81, 82, 98, 180, 478
BssMI	GATC	9 cut(s)	43, 168, 550, 1180, 1464, 1552, 1751, 1855, 2052
BssNI	GRCGYC	2 cut(s)	149, 1284
Bst2UI	CCWGG	2 cut(s)	307, 480
Bst4CI	ACNGT	9 cut(s)	339, 1270, 1383, 1397, 1429, 1537, 1808, 1979, 2015
Bst6I	CTCTTC	4 cut(s)	237, 570, 833, 1053
BstACI	GRCGYC	2 cut(s)	149, 1284
BstDEI	CTNAG	4 cut(s)	897, 984, 1043, 1086
BstENI	CCTNNNNNAGG	2 cut(s)	227, 396
BstF5I	GGATG	3 cut(s)	569, 1532, 1953
BstFNI	CGCG	1 cut(s)	354
BstHHI	GCGC	4 cut(s)	207, 356, 510, 1969
BstKTI	GATC	9 cut(s)	46, 171, 553, 1183, 1467, 1555, 1754, 1858, 2055
BstMAI	GTCTC	4 cut(s)	140, 341, 355, 1854
BstMBI	GATC	9 cut(s)	43, 168, 550, 1180, 1464, 1552, 1751, 1855, 2052
BstMCI	CGRYCG	1 cut(s)	62
BstNI	CCWGG	2 cut(s)	307, 480
BstNSI	RCATGY	1 cut(s)	922
BstSCI	CCNGG	8 cut(s)	80, 81, 98, 113, 125, 305, 478, 828
BstSFI	CTRYAG	1 cut(s)	335
BstSLI	GKGCMC	3 cut(s)	297, 373, 1588
BstUI	CGCG	1 cut(s)	354
BstV1I	GCAGC	4 cut(s)	105, 272, 388, 1249
BstV2I	GAAGAC	2 cut(s)	1005, 1776
BstX2I	RGATCY	6 cut(s)	43, 550, 1180, 1464, 1751, 2052
BstYI	RGATCY	6 cut(s)	43, 550, 1180, 1464, 1751, 2052
BstZI	CGGCCG	1 cut(s)	59
Bsu15I	ATCGAT	2 cut(s)	804, 1452
BsuI	GTATCC	1 cut(s)	169
BsuRI	GGCC	6 cut(s)	61, 113, 142, 305, 402, 1758
BsuTUI	ATCGAT	2 cut(s)	804, 1452
BtrI	CACGTC	1 cut(s)	1054
BtsCI	GGATG	3 cut(s)	569, 1532, 1953
BtsI	GCAGTG	1 cut(s)	1907
BtsIMutI	CAGTG	5 cut(s)	642, 1266, 1388, 1693, 1907
CaiI	CAGNNNCTG	1 cut(s)	1919
CciNI	GCGGCCGC	1 cut(s)	59
CfoI	GCGC	4 cut(s)	207, 356, 510, 1969
Cfr10I	RCCGGY	1 cut(s)	138
Cfr13I	GGNCC	3 cut(s)	111, 141, 1757
Cfr9I	CCCGGG	1 cut(s)	81
ClaI	ATCGAT	2 cut(s)	804, 1452
CseI	GACGC	4 cut(s)	157, 612, 1136, 2021
Csp6I	GTAC	3 cut(s)	581, 647, 1425
CviAII	CATG	7 cut(s)	298, 529, 765, 782, 919, 1409, 2036
CviQI	GTAC	3 cut(s)	581, 647, 1425
DdeI	CTNAG	4 cut(s)	897, 984, 1043, 1086
DpnI	GATC	9 cut(s)	45, 170, 552, 1182, 1466, 1554, 1753, 1857, 2054
DpnII	GATC	9 cut(s)	43, 168, 550, 1180, 1464, 1552, 1751, 1855, 2052
EaeI	YGGCCR	2 cut(s)	59, 303
EagI	CGGCCG	1 cut(s)	59
Eam1104I	CTCTTC	4 cut(s)	237, 570, 833, 1053
EarI	CTCTTC	4 cut(s)	237, 570, 833, 1053
EciI	GGCGGA	2 cut(s)	413, 784
EclXI	CGGCCG	1 cut(s)	59
Eco24I	GRGCYC	3 cut(s)	82, 89, 679
Eco31I	GGTCTC	1 cut(s)	341
Eco32I	GATATC	2 cut(s)	1324, 1830
Eco52I	CGGCCG	1 cut(s)	59
Eco57I	CTGAAG	4 cut(s)	32, 474, 1029, 1458
Eco88I	CYCGRG	4 cut(s)	81, 88, 143, 672
EcoNI	CCTNNNNNAGG	2 cut(s)	227, 396
EcoRII	CCWGG	2 cut(s)	305, 478
EcoRV	GATATC	2 cut(s)	1324, 1830
EcoT38I	GRGCYC	3 cut(s)	82, 89, 679
Esp3I	CGTCTC	2 cut(s)	140, 355
FaeI	CATG	7 cut(s)	301, 532, 768, 785, 922, 1412, 2039
FatI	CATG	7 cut(s)	297, 528, 764, 781, 918, 1408, 2035
FauI	CCCGC	3 cut(s)	102, 359, 686
FauNDI	CATATG	1 cut(s)	1486
Fnu4HI	GCNGC	8 cut(s)	59, 62, 119, 261, 318, 377, 704, 1263
FokI	GGATG	3 cut(s)	556, 1539, 1940
FriOI	GRGCYC	3 cut(s)	82, 89, 679
Fsp4HI	GCNGC	8 cut(s)	59, 62, 119, 261, 318, 377, 704, 1263
FspBI	CTAG	3 cut(s)	380, 1404, 2056
FspI	TGCGCA	2 cut(s)	509, 1968
GlaI	GCGC	4 cut(s)	206, 355, 509, 1968
GluI	GCNGC	8 cut(s)	59, 62, 119, 261, 318, 377, 704, 1263
GsaI	CCCAGC	3 cut(s)	15, 69, 376
GsuI	CTGGAG	1 cut(s)	349
HaeIII	GGCC	6 cut(s)	61, 113, 142, 305, 402, 1758
HgaI	GACGC	4 cut(s)	157, 612, 1136, 2021
HhaI	GCGC	4 cut(s)	207, 356, 510, 1969
Hin1I	GRCGYC	2 cut(s)	149, 1284
Hin1II	CATG	7 cut(s)	301, 532, 768, 785, 922, 1412, 2039
Hin6I	GCGC	4 cut(s)	205, 354, 508, 1967
HinP1I	GCGC	4 cut(s)	205, 354, 508, 1967
HincII	GTYRAC	1 cut(s)	1126
HindII	GTYRAC	1 cut(s)	1126
HindIII	AAGCTT	2 cut(s)	605, 1169
HphI	GGTGA	6 cut(s)	1367, 1505, 1514, 1563, 1598, 1902
Hpy166II	GTNNAC	3 cut(s)	1126, 1273, 1910
Hpy188I	TCNGA	8 cut(s)	43, 454, 574, 658, 849, 1046, 1161, 1891
Hpy8I	GTNNAC	3 cut(s)	1126, 1273, 1910
HpyCH4III	ACNGT	9 cut(s)	339, 1270, 1383, 1397, 1429, 1537, 1808, 1979, 2015
HpyCH4IV	ACGT	3 cut(s)	1053, 1105, 1284
HpyCH4V	TGCA	9 cut(s)	398, 539, 764, 797, 908, 922, 1078, 1484, 1953
HpyF3I	CTNAG	4 cut(s)	897, 984, 1043, 1086
HpySE526I	ACGT	3 cut(s)	1053, 1105, 1284
Hsp92I	GRCGYC	2 cut(s)	149, 1284
Hsp92II	CATG	7 cut(s)	301, 532, 768, 785, 922, 1412, 2039
HspAI	GCGC	4 cut(s)	205, 354, 508, 1967
Kpn2I	TCCGGA	1 cut(s)	1852
KroI	GCCGGC	1 cut(s)	138
KroNI	GCCGGC	1 cut(s)	140
Kzo9I	GATC	9 cut(s)	43, 168, 550, 1180, 1464, 1552, 1751, 1855, 2052
LmnI	GCTCC	7 cut(s)	55, 135, 257, 410, 688, 700, 771
Lsp1109I	GCAGC	4 cut(s)	105, 272, 388, 1249
LweI	GCATC	3 cut(s)	385, 883, 1962
MaeI	CTAG	3 cut(s)	380, 1404, 2056
MaeII	ACGT	3 cut(s)	1053, 1105, 1284
MaeIII	GTNAC	2 cut(s)	1502, 1621
MalI	GATC	9 cut(s)	45, 170, 552, 1182, 1466, 1554, 1753, 1857, 2054
MbiI	CCGCTC	2 cut(s)	58, 703
MboI	GATC	9 cut(s)	43, 168, 550, 1180, 1464, 1552, 1751, 1855, 2052
MfeI	CAATTG	1 cut(s)	1479
MflI	RGATCY	6 cut(s)	43, 550, 1180, 1464, 1751, 2052
MhlI	GDGCHC	7 cut(s)	82, 89, 297, 373, 415, 679, 1588
MlyI	GAGTC	6 cut(s)	32, 318, 850, 1441, 1553, 1910
MmeI	TCCRAC	3 cut(s)	543, 678, 1989
MroI	TCCGGA	1 cut(s)	1852
MroNI	GCCGGC	1 cut(s)	138
MroXI	GAANNNNTTC	2 cut(s)	500, 1107
MseI	TTAA	6 cut(s)	563, 879, 956, 1022, 1347, 2043
MspR9I	CCNGG	8 cut(s)	82, 83, 100, 115, 127, 307, 480, 830
MunI	CAATTG	1 cut(s)	1479
Mva1269I	GAATGC	1 cut(s)	681
MvaI	CCWGG	2 cut(s)	307, 480
MvnI	CGCG	1 cut(s)	354
NaeI	GCCGGC	1 cut(s)	140
NciI	CCSGG	6 cut(s)	82, 83, 100, 115, 127, 830
NdeI	CATATG	1 cut(s)	1486
NdeII	GATC	9 cut(s)	43, 168, 550, 1180, 1464, 1552, 1751, 1855, 2052
NgoMIV	GCCGGC	1 cut(s)	138
NlaIII	CATG	7 cut(s)	301, 532, 768, 785, 922, 1412, 2039
NlaIV	GGNNCC	7 cut(s)	137, 294, 484, 552, 1466, 1636, 1704
NmeAIII	GCCGAG	1 cut(s)	382
NmuCI	GTSAC	2 cut(s)	1502, 1621
NotI	GCGGCCGC	1 cut(s)	59
NsbI	TGCGCA	2 cut(s)	509, 1968
NspI	RCATGY	1 cut(s)	922
PaeR7I	CTCGAG	1 cut(s)	672
PcsI	WCGNNNNNNNCGW	1 cut(s)	177
PctI	GAATGC	1 cut(s)	681
PdiI	GCCGGC	1 cut(s)	140
PdmI	GAANNNNTTC	2 cut(s)	500, 1107
PfeI	GAWTC	6 cut(s)	501, 653, 1031, 1449, 1603, 1924
PflMI	CCANNNNNTGG	1 cut(s)	1919
PkrI	GCNGC	8 cut(s)	60, 63, 120, 262, 319, 378, 705, 1264
PleI	GAGTC	6 cut(s)	32, 318, 849, 1440, 1553, 1910
PpsI	GAGTC	6 cut(s)	32, 318, 849, 1440, 1553, 1910
PshBI	ATTAAT	1 cut(s)	956
Psp6I	CCWGG	2 cut(s)	305, 478
PspFI	CCCAGC	3 cut(s)	11, 65, 372
PspGI	CCWGG	2 cut(s)	305, 478
PspN4I	GGNNCC	7 cut(s)	137, 294, 484, 552, 1466, 1636, 1704
PspPI	GGNCC	3 cut(s)	111, 141, 1757
PspXI	VCTCGAGB	1 cut(s)	672
PstNI	CAGNNNCTG	1 cut(s)	1919
PsuI	RGATCY	6 cut(s)	43, 550, 1180, 1464, 1751, 2052
RsaI	GTAC	3 cut(s)	582, 648, 1426
RsaNI	GTAC	3 cut(s)	581, 647, 1425
SaqAI	TTAA	6 cut(s)	563, 879, 956, 1022, 1347, 2043
SatI	GCNGC	8 cut(s)	59, 62, 119, 261, 318, 377, 704, 1263
Sau3AI	GATC	9 cut(s)	43, 168, 550, 1180, 1464, 1552, 1751, 1855, 2052
Sau96I	GGNCC	3 cut(s)	111, 141, 1757
SchI	GAGTC	6 cut(s)	32, 318, 850, 1441, 1553, 1910
ScrFI	CCNGG	8 cut(s)	82, 83, 100, 115, 127, 307, 480, 830
SduI	GDGCHC	7 cut(s)	82, 89, 297, 373, 415, 679, 1588
SfaNI	GCATC	3 cut(s)	385, 883, 1962
SfcI	CTRYAG	1 cut(s)	335
Sfr274I	CTCGAG	1 cut(s)	672
SlaI	CTCGAG	1 cut(s)	672
SmaI	CCCGGG	1 cut(s)	83
SmlI	CTYRAG	9 cut(s)	104, 158, 490, 672, 692, 736, 1184, 1547, 1561
SmoI	CTYRAG	9 cut(s)	104, 158, 490, 672, 692, 736, 1184, 1547, 1561
SsiI	CCGC	9 cut(s)	58, 62, 109, 318, 352, 424, 679, 703, 769
SspMI	CTAG	3 cut(s)	380, 1404, 2056
StyD4I	CCNGG	8 cut(s)	80, 81, 98, 113, 125, 305, 478, 828
TaaI	ACNGT	9 cut(s)	339, 1270, 1383, 1397, 1429, 1537, 1808, 1979, 2015
TaiI	ACGT	3 cut(s)	1056, 1108, 1287
TaqI	TCGA	8 cut(s)	171, 673, 726, 804, 1252, 1452, 1718, 1858
TaqII	GACCGA	1 cut(s)	1582
TatI	WGTACW	1 cut(s)	646
TauI	GCSGC	4 cut(s)	61, 64, 320, 706
TfiI	GAWTC	6 cut(s)	501, 653, 1031, 1449, 1603, 1924
Tru1I	TTAA	6 cut(s)	563, 879, 956, 1022, 1347, 2043
Tru9I	TTAA	6 cut(s)	563, 879, 956, 1022, 1347, 2043
TscAI	CASTG	5 cut(s)	642, 1273, 1388, 1693, 1907
TseFI	GTSAC	2 cut(s)	1502, 1621
TseI	GCWGC	4 cut(s)	118, 260, 376, 1262
Tsp45I	GTSAC	2 cut(s)	1502, 1621
TspGWI	ACGGA	3 cut(s)	148, 379, 1321
TspMI	CCCGGG	1 cut(s)	81
TspRI	CASTG	5 cut(s)	642, 1273, 1388, 1693, 1907
Van91I	CCANNNNNTGG	1 cut(s)	1919
VspI	ATTAAT	1 cut(s)	956
XagI	CCTNNNNNAGG	2 cut(s)	227, 396
XapI	RAATTY	3 cut(s)	789, 1189, 1419
XceI	RCATGY	1 cut(s)	922
XcmI	CCANNNNNNNNNTGG	1 cut(s)	526
XhoI	CTCGAG	1 cut(s)	672
XmaI	CCCGGG	1 cut(s)	81
XmnI	GAANNNNTTC	2 cut(s)	500, 1107
XspI	CTAG	3 cut(s)	380, 1404, 2056
ZraI	GACGTC	1 cut(s)	1285

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.