Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0009527

Physical Location & Seq

Genomic Coordinates Forward (+)

34104198 .. 34108772

Gene Structure 4575 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000033913

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2454 bp

ATGAAGAAGCCGAGCAAGCCGACATTCCCACTACCGGACTCGGATCTTCAGCCGGAGCGGCCGCCCAGCAGGAGGAAAGCCCGGGGCTCGGGTTTGCCCCGGCTCAAGCGGGCCGGGCTTCCCACCGGGAAACGGAGCCGGCCCGAGACGCCTTTTCTCAAGTGGAAGATCGAGGAGGATAACGAGGAGAACGGGAAGGAGAGGCGGAAAGACCAAAATGACCTTGACGAGGAGGAGAGAGAAGAGGGAGGAGCGAGGAGGAAGGTCAAGAAGGGGAGAGAGGTGCCCTTGTCGGCCAGGAAGCTCGCTGCTGGACTCTGGAGGTTACAGTTGCCGGAGACCGGCGCTGAGAGACGGAGTGCCCAGCAGCTAGGGTTTCAGCCTGATGCAGGCCATATTGGAGCACCATTTCTCCGCCAACGCAATAGCAAAGGATTTGCTTCTGAAGCAAAGGATAATTTACAAAGCCCTGGTTCCACCTCAAGGAATGGATTCTTGCGCAAGTTATCCAACTCTGTCATGGAAGGTGCAACAAAATGGGATCCTGTCTGCTTAAAATCATCAGAAGAGGTACGCCAGATTTACAGCCAAATGAAGCTTCTTGATCAACAAGTGTCTGCTGTATCAGTGGTAAATGTACTTGAATCTGAATTAGAGCAGGCTCGAGCCCGCATTCAGGAGCTTGAGTTGGAGCGGCGTTCCTCAAAAAAGAAACTTGAACACTTCTTGAGGAACATGAATGAGGAAAAGGTTGCATGGCGGAGCAGAGAGCATGAGAAAATTCGTGCATTTATCGATGACATCAAGGTTGAATTGAACCGGGAAAGGAAGAGTCGTCAGAGAACTGAAATACTCAATTCCAAATTGGTTAATGAGCTTGCTGATGCTAAGTTATCTGCAAAGCGATACATGCAGGACTATGAAAAAGAAAGAAAGGCAAGAGAATTAATTGAGGAAGTATGTGATGAGCTTGCTAAGGAAATTGGAGAAGACAAGGCTGAAGTTGAAGCATTAAAGAGAGAATCTATGAAACTCAGAGATGACGTGGAAGAGGAAAGGAAGATGTTGCAGATGGCTGAGGTCTGGCGTGAGGAACGTGTTCAAATGAAGCTGGTTGACGCAAAGGTGGCAGTTGAGGAGAAGTATTCTCTGATGAACAAGCTTGTGGCAGATCTTGAGAATTTTTTGAAGTCAAGAAGTTCAACCCCAGATGTGAAGGAAATGAGAGAAGGAGAGTTTCTTCGACAGGCTGCTGCTGCTGTAAACATTCAAGACGTCAAGGACTTTTCTTATGAACCCCCCAATCCTGATGATATCTTTTCCGTGTTTGAAGAAGTTAATTTTGGTGAGCCTAATGAGAGGGAGATTGAACAGTGTGTTGCTTACAGTCCTGCTAGTCATGCTTCCAAAATTCGTACTGTGAGTCCTGAAGCTAATGGAATCGATAAAAACCGGATCCAGAGGCATGCAATTGCATATGTTGGTGAGAATGGTGACATAGAAGAAGATGAGAGTGGATGGGAAACTGTGAGCCATCTTGAGGATCAGGACTCAAGCTATTCACCAGACGGGAGTGCCCCATCGGTCAATAAGAATCACCGAGAGAGTAACGTCACAGATAGTGGAACCGAATGGGAAGAAGAAAATTATGGGGAGGAAACACCAATTACCGAAATCAGCGAGGTTTGCTCGGTGCCAATAAAGCAGTCGAAGAAGGTCTCAAGTATAGCAAGGCTTTGGAGATCTGGCCCAAATAATGAAGACACCTACAAGATTATCTCAGTAGAAGGAATAAACGGGAGGCTCTCAAATGGAAGGATATCCAAAGGGGATATTTTGTCGCCAGATCGAGGTTCAGGTAAAGGTGGTTTTAGCCCCTCTGATTTAGGGGGGCAGTGGAGTTCACCGGACTCTGGGAATCATCATATTCGGGGTATGAAAGGGTGCATCCCTCTTGGTGCGCAGAAGAACAGTTTGAAGGCAAGACTTTTGGAGGCAAGGGAGGGGGACTTGAGCTCTGACGTTCTGCAATACTGTATTTCGGAGAAATGTCTTGCCCATGCTTCTTACAAGTCGCCGCCTCATCCTGTGAAGTGTAAACTATCAACATTGATTTTGGTAAAATGTACTGTTAGGAGAGGGGGAAGCTCGAGCAGATTGCACCCAGAAGAAATGTTTTGCCCTAAGACCTCCTTTGAGGCACAAGATGTGAGGGAGATGACACCGAGAATGCTGCATTTGATGTTGACACAATCAACTGAGAAAGAGCCGAGGAGCCAATTTGTAGTGGAACAGGTTACACAATGTTGGAATAGAATATGCGCAAACCCTGCACAAAAAGTGCTTAATCTCAAGGGAAACTCCAAATCAATTTCCATTAATGCTGGGATACCTGATGAGAGAGGATTGAGCAATGAAGGGAGCCATGAGCGAGTGCTGGCTATAACTCCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

818

Amino Acids

92.35

Weight (kDa)

6.77

Isoelectric Point (pI)

55.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009527)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50660
fragaria_vesca	FvH4_3g22650 FvH4_3g22650 FvH4_3g22650 FvH4_3g22650 FvH4_3g22650
malus_domestica	MD03G1201300.v1.1 MD11G1218700.v1.1
prunus_persica	Prupe.4G212500_v2.0.a1
pyrus_communis	pycom03g15260 pycom11g19260
rosa_chinensis	RchiOBHm_Chr5g0039421
rosa_laevigata	RLG00000033913
rosa_multiflora	Rmu_co8501983.1_g000001
rosa_roxburghii	Rroxscaffold_1G00040560 Rroxscaffold_1G00041790
rosa_rugosa	Rorug05G0179100
rosa_samantha	Rh5AG265700 Rh5BG270300 Rh5CG303300 Rh5DG278300
rosa_wichuraiana	Rw5G024900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1278
Acc16I	TGCGCA	3 cut(s)	500, 1962, 2323
AccB1I	GGYRCC	2 cut(s)	283, 1693
AccBSI	CCGCTC	2 cut(s)	58, 694
AciI	CCGC	9 cut(s)	58, 62, 109, 205, 415, 670, 694, 760, 2078
AclWI	GGATC	6 cut(s)	51, 536, 549, 1450, 1463, 1551
AcoI	YGGCCR	2 cut(s)	59, 294
AcsI	RAATTY	3 cut(s)	780, 1180, 1410
AcuI	CTGAAG	4 cut(s)	32, 465, 1020, 1449
AcyI	GRCGYC	2 cut(s)	149, 1275
AfaI	GTAC	4 cut(s)	573, 639, 1417, 2128
AflIII	ACRYGT	1 cut(s)	1096
AjiI	CACGTC	1 cut(s)	1045
AjnI	CCWGG	2 cut(s)	296, 469
AjuI	GAANNNNNNNTTGG	4 cut(s)	582, 614, 1326, 1358
Alw21I	GWGCWC	2 cut(s)	406, 2018
Alw26I	GTCTC	4 cut(s)	140, 332, 346, 1723
AlwI	GGATC	6 cut(s)	51, 536, 549, 1450, 1463, 1551
Ama87I	CYCGRG	5 cut(s)	81, 88, 143, 663, 2149
AoxI	GGCC	6 cut(s)	59, 111, 140, 294, 391, 1747
ApeKI	GCWGC	6 cut(s)	308, 367, 1250, 1253, 1256, 2233
ApoI	RAATTY	3 cut(s)	780, 1180, 1410
AseI	ATTAAT	2 cut(s)	947, 2379
Asp700I	GAANNNNTTC	2 cut(s)	491, 1098
AspLEI	GCGC	4 cut(s)	347, 501, 1963, 2324
AspS9I	GGNCC	3 cut(s)	111, 141, 1748
AsuC2I	CCSGG	6 cut(s)	82, 83, 100, 115, 127, 821
AsuHPI	GGTGA	6 cut(s)	1358, 1496, 1505, 1554, 1589, 1896
AvaI	CYCGRG	5 cut(s)	81, 88, 143, 663, 2149
BaeGI	GKGCMC	3 cut(s)	288, 364, 1579
BamHI	GGATCC	2 cut(s)	541, 1455
BanI	GGYRCC	2 cut(s)	283, 1693
BanII	GRGCYC	3 cut(s)	89, 670, 2018
BbsI	GAAGAC	2 cut(s)	996, 1767
Bbv12I	GWGCWC	2 cut(s)	406, 2018
BbvCI	CCTCAGC	1 cut(s)	1077
BbvI	GCAGC	6 cut(s)	295, 379, 1237, 1240, 1243, 2220
BccI	CCATC	4 cut(s)	1066, 1512, 1542, 1588
BcgI	CGANNNNNNTGC	4 cut(s)	2140, 2174, 2215, 2249
BciT130I	CCWGG	2 cut(s)	298, 471
BciVI	GTATCC	1 cut(s)	2382
BclI	TGATCA	1 cut(s)	604
BcnI	CCSGG	6 cut(s)	82, 83, 100, 115, 127, 821
BcoDI	GTCTC	4 cut(s)	140, 332, 346, 1723
BfaI	CTAG	3 cut(s)	371, 1395, 2452
BfoI	RGCGCY	1 cut(s)	348
BfuI	GTATCC	1 cut(s)	2382
BglI	GCCNNNNNGGC	1 cut(s)	58
BglII	AGATCT	2 cut(s)	1171, 1742
Bme1390I	CCNGG	8 cut(s)	82, 83, 100, 115, 127, 298, 471, 821
BmeT110I	CYCGRG	5 cut(s)	81, 88, 143, 663, 2149
BmgBI	CACGTC	1 cut(s)	1045
BmgT120I	GGNCC	3 cut(s)	111, 141, 1748
BmiI	GGNNCC	9 cut(s)	137, 285, 475, 543, 1457, 1627, 1695, 2276, 2423
BmrFI	CCNGG	8 cut(s)	82, 83, 100, 115, 127, 298, 471, 821
BmsI	GCATC	3 cut(s)	376, 874, 1956
BpiI	GAAGAC	2 cut(s)	996, 1767
BplI	GAGNNNNNCTC	2 cut(s)	1673, 1705
BpmI	CTGGAG	1 cut(s)	340
Bpu10I	CCTNAGC	2 cut(s)	975, 1077
BpuMI	CCSGG	6 cut(s)	82, 83, 100, 115, 127, 821
Bsa29I	ATCGAT	2 cut(s)	795, 1443
BsaHI	GRCGYC	2 cut(s)	149, 1275
BsaI	GGTCTC	2 cut(s)	332, 1723
BsaJI	CCNNGG	5 cut(s)	81, 82, 98, 469, 2270
BsaWI	WCCGGW	3 cut(s)	34, 1452, 1906
BsaXI	ACNNNNNCTCC	4 cut(s)	396, 426, 671, 701
Bse118I	RCCGGY	2 cut(s)	138, 341
Bse3DI	GCAATG	1 cut(s)	2419
BseBI	CCWGG	2 cut(s)	298, 471
BseCI	ATCGAT	2 cut(s)	795, 1443
BseDI	CCNNGG	5 cut(s)	81, 82, 98, 469, 2270
BseGI	GGATG	3 cut(s)	1523, 1947, 2083
BseMI	GCAATG	1 cut(s)	2419
BseMII	CTCAG	5 cut(s)	339, 1048, 1068, 1794, 2250
BseRI	GAGGAG	8 cut(s)	188, 200, 245, 248, 264, 271, 1151, 2287
BseSI	GKGCMC	3 cut(s)	288, 364, 1579
BseX3I	CGGCCG	1 cut(s)	59
BseXI	GCAGC	6 cut(s)	295, 379, 1237, 1240, 1243, 2220
BseYI	CCCAGC	3 cut(s)	65, 363, 2384
BsgI	GTGCAG	1 cut(s)	2316
Bsh1285I	CGRYCG	1 cut(s)	62
BshFI	GGCC	6 cut(s)	61, 113, 142, 296, 393, 1749
BshNI	GGYRCC	2 cut(s)	283, 1693
BshVI	ATCGAT	2 cut(s)	795, 1443
BsiEI	CGRYCG	1 cut(s)	62
BsiHKAI	GWGCWC	2 cut(s)	406, 2018
BsiHKCI	CYCGRG	5 cut(s)	81, 88, 143, 663, 2149
BslFI	GGGAC	1 cut(s)	2021
BsmAI	GTCTC	4 cut(s)	140, 332, 346, 1723
BsmBI	CGTCTC	2 cut(s)	140, 346
BsmFI	GGGAC	1 cut(s)	2021
BsmI	GAATGC	2 cut(s)	672, 2235
BsnI	GGCC	6 cut(s)	61, 113, 142, 296, 393, 1749
Bso31I	GGTCTC	2 cut(s)	332, 1723
BsoBI	CYCGRG	5 cut(s)	81, 88, 143, 663, 2149
Bsp1286I	GDGCHC	7 cut(s)	89, 288, 364, 406, 670, 1579, 2018
Bsp143I	GATC	9 cut(s)	43, 168, 541, 604, 1171, 1455, 1543, 1742, 1846
BspACI	CCGC	9 cut(s)	58, 62, 109, 205, 415, 670, 694, 760, 2078
BspANI	GGCC	6 cut(s)	61, 113, 142, 296, 393, 1749
BspCNI	CTCAG	5 cut(s)	340, 1047, 1069, 1793, 2251
BspDI	ATCGAT	2 cut(s)	795, 1443
BspLI	GGNNCC	9 cut(s)	137, 285, 475, 543, 1457, 1627, 1695, 2276, 2423
BspPI	GGATC	6 cut(s)	51, 536, 549, 1450, 1463, 1551
BspT107I	GGYRCC	2 cut(s)	283, 1693
BspTNI	GGTCTC	2 cut(s)	332, 1723
BsrBI	CCGCTC	2 cut(s)	58, 694
BsrDI	GCAATG	1 cut(s)	2419
BsrFI	RCCGGY	2 cut(s)	138, 341
BssAI	RCCGGY	2 cut(s)	138, 341
BssECI	CCNNGG	5 cut(s)	81, 82, 98, 469, 2270
BssMI	GATC	9 cut(s)	43, 168, 541, 604, 1171, 1455, 1543, 1742, 1846
BssNI	GRCGYC	2 cut(s)	149, 1275
Bst2UI	CCWGG	2 cut(s)	298, 471
Bst4CI	ACNGT	8 cut(s)	330, 1374, 1388, 1420, 1528, 1973, 2036, 2131
Bst6I	CTCTTC	4 cut(s)	237, 561, 824, 1044
BstACI	GRCGYC	2 cut(s)	149, 1275
BstAPI	GCANNNNNTGC	1 cut(s)	2330
BstDEI	CTNAG	8 cut(s)	348, 888, 975, 1034, 1077, 1780, 2184, 2259
BstENI	CCTNNNNNAGG	2 cut(s)	227, 387
BstF5I	GGATG	3 cut(s)	1523, 1947, 2083
BstH2I	RGCGCY	1 cut(s)	348
BstHHI	GCGC	4 cut(s)	347, 501, 1963, 2324
BstKTI	GATC	9 cut(s)	46, 171, 544, 607, 1174, 1458, 1546, 1745, 1849
BstMAI	GTCTC	4 cut(s)	140, 332, 346, 1723
BstMBI	GATC	9 cut(s)	43, 168, 541, 604, 1171, 1455, 1543, 1742, 1846
BstMCI	CGRYCG	1 cut(s)	62
BstNI	CCWGG	2 cut(s)	298, 471
BstNSI	RCATGY	2 cut(s)	913, 1469
BstSCI	CCNGG	8 cut(s)	80, 81, 98, 113, 125, 296, 469, 819
BstSLI	GKGCMC	3 cut(s)	288, 364, 1579
BstV1I	GCAGC	6 cut(s)	295, 379, 1237, 1240, 1243, 2220
BstV2I	GAAGAC	2 cut(s)	996, 1767
BstX2I	RGATCY	5 cut(s)	43, 541, 1171, 1455, 1742
BstYI	RGATCY	5 cut(s)	43, 541, 1171, 1455, 1742
BstZI	CGGCCG	1 cut(s)	59
Bsu15I	ATCGAT	2 cut(s)	795, 1443
BsuI	GTATCC	1 cut(s)	2382
BsuRI	GGCC	6 cut(s)	61, 113, 142, 296, 393, 1749
BsuTUI	ATCGAT	2 cut(s)	795, 1443
BtrI	CACGTC	1 cut(s)	1045
BtsCI	GGATG	3 cut(s)	1523, 1947, 2083
BtsI	GCAGTG	1 cut(s)	1901
BtsIMutI	CAGTG	3 cut(s)	633, 1379, 1901
CciNI	GCGGCCGC	1 cut(s)	59
CfoI	GCGC	4 cut(s)	347, 501, 1963, 2324
Cfr10I	RCCGGY	2 cut(s)	138, 341
Cfr13I	GGNCC	3 cut(s)	111, 141, 1748
Cfr9I	CCCGGG	1 cut(s)	81
ClaI	ATCGAT	2 cut(s)	795, 1443
CseI	GACGC	2 cut(s)	157, 1127
Csp6I	GTAC	4 cut(s)	572, 638, 1416, 2127
CviAII	CATG	9 cut(s)	520, 736, 756, 773, 910, 1400, 1466, 2060, 2426
CviQI	GTAC	4 cut(s)	572, 638, 1416, 2127
DdeI	CTNAG	8 cut(s)	348, 888, 975, 1034, 1077, 1780, 2184, 2259
DpnI	GATC	9 cut(s)	45, 170, 543, 606, 1173, 1457, 1545, 1744, 1848
DpnII	GATC	9 cut(s)	43, 168, 541, 604, 1171, 1455, 1543, 1742, 1846
EaeI	YGGCCR	2 cut(s)	59, 294
EagI	CGGCCG	1 cut(s)	59
Eam1104I	CTCTTC	4 cut(s)	237, 561, 824, 1044
EarI	CTCTTC	4 cut(s)	237, 561, 824, 1044
EciI	GGCGGA	3 cut(s)	220, 404, 775
Ecl136II	GAGCTC	1 cut(s)	2016
EclXI	CGGCCG	1 cut(s)	59
Eco24I	GRGCYC	3 cut(s)	89, 670, 2018
Eco31I	GGTCTC	2 cut(s)	332, 1723
Eco32I	GATATC	2 cut(s)	1315, 1821
Eco52I	CGGCCG	1 cut(s)	59
Eco53kI	GAGCTC	1 cut(s)	2016
Eco57I	CTGAAG	4 cut(s)	32, 465, 1020, 1449
Eco88I	CYCGRG	5 cut(s)	81, 88, 143, 663, 2149
EcoICRI	GAGCTC	1 cut(s)	2016
EcoNI	CCTNNNNNAGG	2 cut(s)	227, 387
EcoRII	CCWGG	2 cut(s)	296, 469
EcoRV	GATATC	2 cut(s)	1315, 1821
EcoT38I	GRGCYC	3 cut(s)	89, 670, 2018
Esp3I	CGTCTC	2 cut(s)	140, 346
FaeI	CATG	9 cut(s)	523, 739, 759, 776, 913, 1403, 1469, 2063, 2429
FalI	AAGNNNNNCTT	2 cut(s)	2177, 2209
FaqI	GGGAC	1 cut(s)	2021
FatI	CATG	9 cut(s)	519, 735, 755, 772, 909, 1399, 1465, 2059, 2425
FauI	CCCGC	2 cut(s)	102, 677
FauNDI	CATATG	1 cut(s)	1477
FbaI	TGATCA	1 cut(s)	604
FokI	GGATG	3 cut(s)	1530, 1934, 2070
FriOI	GRGCYC	3 cut(s)	89, 670, 2018
FspBI	CTAG	3 cut(s)	371, 1395, 2452
FspI	TGCGCA	3 cut(s)	500, 1962, 2323
GlaI	GCGC	4 cut(s)	346, 500, 1962, 2323
GsaI	CCCAGC	3 cut(s)	69, 367, 2388
GsuI	CTGGAG	1 cut(s)	340
HaeII	RGCGCY	1 cut(s)	348
HaeIII	GGCC	6 cut(s)	61, 113, 142, 296, 393, 1749
HgaI	GACGC	2 cut(s)	157, 1127
HhaI	GCGC	4 cut(s)	347, 501, 1963, 2324
Hin1I	GRCGYC	2 cut(s)	149, 1275
Hin1II	CATG	9 cut(s)	523, 739, 759, 776, 913, 1403, 1469, 2063, 2429
Hin6I	GCGC	4 cut(s)	345, 499, 1961, 2322
HinP1I	GCGC	4 cut(s)	345, 499, 1961, 2322
HincII	GTYRAC	2 cut(s)	1117, 2247
HindII	GTYRAC	2 cut(s)	1117, 2247
HindIII	AAGCTT	2 cut(s)	596, 1160
HphI	GGTGA	6 cut(s)	1358, 1496, 1505, 1554, 1589, 1896
Hpy166II	GTNNAC	5 cut(s)	1117, 1264, 1904, 2099, 2247
Hpy8I	GTNNAC	5 cut(s)	1117, 1264, 1904, 2099, 2247
HpyCH4III	ACNGT	8 cut(s)	330, 1374, 1388, 1420, 1528, 1973, 2036, 2131
HpyCH4IV	ACGT	5 cut(s)	1044, 1096, 1275, 1611, 2022
HpyF3I	CTNAG	8 cut(s)	348, 888, 975, 1034, 1077, 1780, 2184, 2259
HpySE526I	ACGT	5 cut(s)	1044, 1096, 1275, 1611, 2022
Hsp92I	GRCGYC	2 cut(s)	149, 1275
Hsp92II	CATG	9 cut(s)	523, 739, 759, 776, 913, 1403, 1469, 2063, 2429
HspAI	GCGC	4 cut(s)	345, 499, 1961, 2322
KroI	GCCGGC	1 cut(s)	138
KroNI	GCCGGC	1 cut(s)	140
Ksp22I	TGATCA	1 cut(s)	604
Kzo9I	GATC	9 cut(s)	43, 168, 541, 604, 1171, 1455, 1543, 1742, 1846
LmnI	GCTCC	9 cut(s)	55, 135, 251, 401, 679, 691, 762, 2274, 2421
Lsp1109I	GCAGC	6 cut(s)	295, 379, 1237, 1240, 1243, 2220
LweI	GCATC	3 cut(s)	376, 874, 1956
MaeI	CTAG	3 cut(s)	371, 1395, 2452
MaeII	ACGT	5 cut(s)	1044, 1096, 1275, 1611, 2022
MaeIII	GTNAC	5 cut(s)	324, 1493, 1607, 1612, 2296
MalI	GATC	9 cut(s)	45, 170, 543, 606, 1173, 1457, 1545, 1744, 1848
MbiI	CCGCTC	2 cut(s)	58, 694
MboI	GATC	9 cut(s)	43, 168, 541, 604, 1171, 1455, 1543, 1742, 1846
MfeI	CAATTG	1 cut(s)	1470
MflI	RGATCY	5 cut(s)	43, 541, 1171, 1455, 1742
MhlI	GDGCHC	7 cut(s)	89, 288, 364, 406, 670, 1579, 2018
MlyI	GAGTC	6 cut(s)	32, 309, 841, 1432, 1544, 1904
MmeI	TCCRAC	3 cut(s)	534, 669, 2288
MroNI	GCCGGC	1 cut(s)	138
MroXI	GAANNNNTTC	2 cut(s)	491, 1098
MseI	TTAA	7 cut(s)	554, 870, 947, 1013, 1338, 2346, 2379
MspR9I	CCNGG	8 cut(s)	82, 83, 100, 115, 127, 298, 471, 821
MunI	CAATTG	1 cut(s)	1470
Mva1269I	GAATGC	2 cut(s)	672, 2235
MvaI	CCWGG	2 cut(s)	298, 471
NaeI	GCCGGC	1 cut(s)	140
NciI	CCSGG	6 cut(s)	82, 83, 100, 115, 127, 821
NdeI	CATATG	1 cut(s)	1477
NdeII	GATC	9 cut(s)	43, 168, 541, 604, 1171, 1455, 1543, 1742, 1846
NgoMIV	GCCGGC	1 cut(s)	138
NlaIII	CATG	9 cut(s)	523, 739, 759, 776, 913, 1403, 1469, 2063, 2429
NlaIV	GGNNCC	9 cut(s)	137, 285, 475, 543, 1457, 1627, 1695, 2276, 2423
NmeAIII	GCCGAG	2 cut(s)	36, 2295
NmuCI	GTSAC	2 cut(s)	1493, 1612
NotI	GCGGCCGC	1 cut(s)	59
NsbI	TGCGCA	3 cut(s)	500, 1962, 2323
NspI	RCATGY	2 cut(s)	913, 1469
PaeI	GCATGC	1 cut(s)	1469
PaeR7I	CTCGAG	2 cut(s)	663, 2149
PctI	GAATGC	2 cut(s)	672, 2235
PdiI	GCCGGC	1 cut(s)	140
PdmI	GAANNNNTTC	2 cut(s)	491, 1098
PfeI	GAWTC	6 cut(s)	492, 644, 1022, 1440, 1594, 1918
PleI	GAGTC	6 cut(s)	32, 309, 840, 1431, 1544, 1904
PpsI	GAGTC	6 cut(s)	32, 309, 840, 1431, 1544, 1904
PshBI	ATTAAT	2 cut(s)	947, 2379
Psp124BI	GAGCTC	1 cut(s)	2018
Psp6I	CCWGG	2 cut(s)	296, 469
PspFI	CCCAGC	3 cut(s)	65, 363, 2384
PspGI	CCWGG	2 cut(s)	296, 469
PspN4I	GGNNCC	9 cut(s)	137, 285, 475, 543, 1457, 1627, 1695, 2276, 2423
PspPI	GGNCC	3 cut(s)	111, 141, 1748
PspXI	VCTCGAGB	2 cut(s)	663, 2149
PsuI	RGATCY	5 cut(s)	43, 541, 1171, 1455, 1742
RsaI	GTAC	4 cut(s)	573, 639, 1417, 2128
RsaNI	GTAC	4 cut(s)	572, 638, 1416, 2127
SacI	GAGCTC	1 cut(s)	2018
SaqAI	TTAA	7 cut(s)	554, 870, 947, 1013, 1338, 2346, 2379
Sau3AI	GATC	9 cut(s)	43, 168, 541, 604, 1171, 1455, 1543, 1742, 1846
Sau96I	GGNCC	3 cut(s)	111, 141, 1748
SchI	GAGTC	6 cut(s)	32, 309, 841, 1432, 1544, 1904
ScrFI	CCNGG	8 cut(s)	82, 83, 100, 115, 127, 298, 471, 821
SduI	GDGCHC	7 cut(s)	89, 288, 364, 406, 670, 1579, 2018
SfaNI	GCATC	3 cut(s)	376, 874, 1956
Sfr274I	CTCGAG	2 cut(s)	663, 2149
SlaI	CTCGAG	2 cut(s)	663, 2149
SmaI	CCCGGG	1 cut(s)	83
SphI	GCATGC	1 cut(s)	1469
SsiI	CCGC	9 cut(s)	58, 62, 109, 205, 415, 670, 694, 760, 2078
SspMI	CTAG	3 cut(s)	371, 1395, 2452
SstI	GAGCTC	1 cut(s)	2018
StyD4I	CCNGG	8 cut(s)	80, 81, 98, 113, 125, 296, 469, 819
TaaI	ACNGT	8 cut(s)	330, 1374, 1388, 1420, 1528, 1973, 2036, 2131
TaiI	ACGT	5 cut(s)	1047, 1099, 1278, 1614, 2025
TaqI	TCGA	8 cut(s)	171, 664, 795, 1243, 1443, 1709, 1849, 2150
TaqII	GACCGA	1 cut(s)	1573
TatI	WGTACW	2 cut(s)	637, 2126
TauI	GCSGC	4 cut(s)	61, 64, 697, 2080
TfiI	GAWTC	6 cut(s)	492, 644, 1022, 1440, 1594, 1918
Tru1I	TTAA	7 cut(s)	554, 870, 947, 1013, 1338, 2346, 2379
Tru9I	TTAA	7 cut(s)	554, 870, 947, 1013, 1338, 2346, 2379
TscAI	CASTG	3 cut(s)	633, 1379, 1901
TseFI	GTSAC	2 cut(s)	1493, 1612
TseI	GCWGC	6 cut(s)	308, 367, 1250, 1253, 1256, 2233
Tsp45I	GTSAC	2 cut(s)	1493, 1612
TspGWI	ACGGA	3 cut(s)	148, 370, 1312
TspMI	CCCGGG	1 cut(s)	81
TspRI	CASTG	3 cut(s)	633, 1379, 1901
VspI	ATTAAT	2 cut(s)	947, 2379
XagI	CCTNNNNNAGG	2 cut(s)	227, 387
XapI	RAATTY	3 cut(s)	780, 1180, 1410
XceI	RCATGY	2 cut(s)	913, 1469
XcmI	CCANNNNNNNNNTGG	1 cut(s)	517
XhoI	CTCGAG	2 cut(s)	663, 2149
XmaI	CCCGGG	1 cut(s)	81
XmnI	GAANNNNTTC	2 cut(s)	491, 1098
XspI	CTAG	3 cut(s)	371, 1395, 2452
ZraI	GACGTC	1 cut(s)	1276

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.