Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009527

Physical Location & Seq

Genomic Coordinates Forward (+)

34112723 .. 34117357

Gene Structure 4635 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ31799

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGAAGAAGCCCAGCAAGCCGACATTCCCACTACCGGACTCGGATCTTCAGCCGGAGCGGCCGCCCAGCAGGAGGAGAGCCCGGGGCTCGGGTTTGCCCCGGCTCAAGCGGGCCGGGCTGCCCACCGGGAAACGGAGCCGGCCCGAGACGCCTTTACTCAAGTGGAAGATCGAGCATACCGAGGAGGAGAACGGGAAGGAGAGGCGGAAAGTCCAAAATGACCTTGTCGAGGAGGAGAGAGAAGAGGGAGGAGGAGGAGCAGCGAGGAGGAAGGGCAAGAAGGGGAGAGAGGTGCCCATGTCGGCCAGGAAGCTCGCCGCCGGACTCTGGAGGCTACAGTTGCCGGAGACCGGCGCCGAGCGACGGAGTGCCCAGCAGCTAGGGTTTCAGCCTGATGCAGGCCATATTGGAGCACCATTTCTCCGCCAACGCAATAGCAAAGGATTTGCTTCTGAAGCAAAGGATAATTTACAAAGCCCTGGTTCCACCTCAAGGAATGGATTCTTGCGCAAGTTATCCAACTCTGTCATGGAAGGTGCAACAAAATGGGATCCTGTCTGCTTAAAATCATCAGAAGAGGTACGCCAGATTTACAGCCAAATGAAGCTTCTTGACCAGCAAGCGTCTGCTGTATCAGTGGTAAATGTACTTGAATCTGAATTAGAGCAGGCTCGAGCCCGGATTCAGGAGCTTGAGTTGGAGCGGCGTTCCTCAAAAAAGAAACTCGAACACTTCTTGAGGAACATGAATGAGGAAAAGGTTGCATGGCGGAGCAGAGAGCATGAGAAAATTCGTGCATTTATCGATGACATCAAGGTTGAATTGAACCGGGAAAGGAAGAGTCGTCAGAGAACTGAAATACTCAATTCCAAATTGGTTAATGAGCTGGCTGATGCTAAGTTATCTGCAAAGCGATACATGCAGGACTATGAAAAAGAAAGAAAGGCAAGAGAATTAATTGAGGAAGTATGTGATGAGCTTGCTAAGGAAATTGGAGAAGACAAGGCTGAAGTTGAAGCATTAAAGAGAGAATCTATGAAACTCAGAGATGACGTGGAAGAGGAAAGGAAGATGTTGCAGATGGCTGAGGTCTGGCGTGAGGAACGTGTTCAAATGAAGCTGGTTGACGCAAAGGTGGCAGTTGAGGAGAAGTATTCTCTGATGAACAAGCTTGTGGCAGATCTTGAGATTTTTTTGAAGTCAAGAAGTTCAACCCCAGATGTGAAGGAAATGAGAGAAGGAGAGTTTCTTCGACGGGCTGCTGCTGCTGTAAACATTCAAGACGTCAAGGACTTTTCTTATGAACCCCCCAATCCTGATGATATCTTTTCTGTGTTTGAAGAAGTTAATTTTGGTGAGCCTAATGAGAGGGAGATTGAACAGTGTGTTGCTTACAGTCCTGCTAGTCATGCTTCCAAAATTCGTACTGTGAGTCCTGAAGCTAATGGAATCGATAAAAACCGGATCCAGAGGCACGCAATTGCATATGTTGGTGAGAATGGTGACATAGAAGAAGATGAGAGTGGATGGGAAACTGTGAGCCATCTTGAGGATCAGGACTCAAGCTATTCACCAGACGGGAGTGCCCCTTCGGTCAATAAGAATCACCGAGAGAGTAATGTCACAGATAGTGGAACCGACGAATGGGAAGAAGAAAATGATGGGGAGGAAACACCAATTACCGAAATCAGTGAGGTTTGCTCGGTGCCAATAAAGCAGTCGAAGAAGGTATCAAGTATAGCAAGGCTTTGGAGATCTGGCCCAAATAATGAAGACAACTACAAGATTATCTCGGTAGAAGGAATAAACGGTAGGCTCTCAAATGGAAGGATATCCAAAGGGGATATTTTGTCTCCGGATCGAGGTTCAGGTAAAGGTGGTTTGAGCCCCTCTGATTTAGTGGGGCAGTGGAGTTCACCAGACTCTGGGAATCATCATATTCGGGGTATGAAAGGGTGCATCCCTCTTGGTGCGCAGAAGAACAGTTTGAAGGCAAGACTTTTGGAGGCAAGGTTGGACAGTCAAAAAGTTCAACTGCGTCATGTGCTTAAACAGAAGATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

687

Amino Acids

77.79

Weight (kDa)

7.2

Isoelectric Point (pI)

59.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009527)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50660
fragaria_vesca	FvH4_3g22650 FvH4_3g22650 FvH4_3g22650 FvH4_3g22650 FvH4_3g22650
malus_domestica	MD03G1201300.v1.1 MD11G1218700.v1.1
prunus_persica	Prupe.4G212500_v2.0.a1
pyrus_communis	pycom03g15260 pycom11g19260
rosa_chinensis	RchiOBHm_Chr5g0039421
rosa_laevigata	RLG00000033913
rosa_multiflora	Rmu_co8501983.1_g000001
rosa_roxburghii	Rroxscaffold_1G00040560 Rroxscaffold_1G00041790
rosa_rugosa	Rorug05G0179100
rosa_samantha	Rh5AG265700 Rh5BG270300 Rh5CG303300 Rh5DG278300
rosa_wichuraiana	Rw5G024900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1287
Acc16I	TGCGCA	2 cut(s)	509, 1974
AccB1I	GGYRCC	3 cut(s)	292, 353, 1705
AccB7I	CCANNNNNTGG	1 cut(s)	1925
AccBSI	CCGCTC	2 cut(s)	58, 703
AccIII	TCCGGA	1 cut(s)	1855
AciI	CCGC	8 cut(s)	58, 62, 109, 205, 318, 424, 703, 769
AclWI	GGATC	7 cut(s)	51, 545, 558, 1459, 1472, 1560, 1866
AcoI	YGGCCR	2 cut(s)	59, 303
AcsI	RAATTY	2 cut(s)	789, 1419
AcuI	CTGAAG	4 cut(s)	32, 474, 1029, 1458
AcyI	GRCGYC	3 cut(s)	149, 354, 1284
AfaI	GTAC	3 cut(s)	582, 648, 1426
AflIII	ACRYGT	1 cut(s)	1105
AjiI	CACGTC	1 cut(s)	1054
AjnI	CCWGG	2 cut(s)	305, 478
AjuI	GAANNNNNNNTTGG	4 cut(s)	591, 623, 1335, 1367
Alw21I	GWGCWC	1 cut(s)	415
Alw26I	GTCTC	3 cut(s)	140, 341, 1857
AlwI	GGATC	7 cut(s)	51, 545, 558, 1459, 1472, 1560, 1866
AlwNI	CAGNNNCTG	1 cut(s)	1925
Ama87I	CYCGRG	4 cut(s)	81, 88, 143, 672
Aor13HI	TCCGGA	1 cut(s)	1855
AoxI	GGCC	6 cut(s)	59, 111, 140, 303, 400, 1759
ApeKI	GCWGC	6 cut(s)	118, 260, 376, 1259, 1262, 1265
ApoI	RAATTY	2 cut(s)	789, 1419
AseI	ATTAAT	1 cut(s)	956
Asp700I	GAANNNNTTC	2 cut(s)	500, 1107
AspLEI	GCGC	3 cut(s)	356, 510, 1975
AspS9I	GGNCC	3 cut(s)	111, 141, 1760
AsuC2I	CCSGG	7 cut(s)	82, 83, 100, 115, 127, 679, 830
AsuHPI	GGTGA	6 cut(s)	1367, 1505, 1514, 1563, 1598, 1908
AvaI	CYCGRG	4 cut(s)	81, 88, 143, 672
BaeGI	GKGCMC	3 cut(s)	297, 373, 1588
BamHI	GGATCC	2 cut(s)	550, 1464
BanI	GGYRCC	3 cut(s)	292, 353, 1705
BanII	GRGCYC	4 cut(s)	82, 89, 679, 1889
BbsI	GAAGAC	2 cut(s)	1005, 1779
Bbv12I	GWGCWC	1 cut(s)	415
BbvCI	CCTCAGC	1 cut(s)	1086
BbvI	GCAGC	6 cut(s)	105, 272, 388, 1246, 1249, 1252
BccI	CCATC	4 cut(s)	1075, 1521, 1551, 1655
BciT130I	CCWGG	2 cut(s)	307, 480
BcnI	CCSGG	7 cut(s)	82, 83, 100, 115, 127, 679, 830
BcoDI	GTCTC	3 cut(s)	140, 341, 1857
BfaI	CTAG	3 cut(s)	380, 1404, 2062
BfmI	CTRYAG	1 cut(s)	335
BfoI	RGCGCY	1 cut(s)	357
BglI	GCCNNNNNGGC	1 cut(s)	58
BglII	AGATCT	3 cut(s)	1180, 1754, 2058
Bme1390I	CCNGG	9 cut(s)	82, 83, 100, 115, 127, 307, 480, 679, 830
BmeT110I	CYCGRG	4 cut(s)	81, 88, 143, 672
BmgBI	CACGTC	1 cut(s)	1054
BmgT120I	GGNCC	3 cut(s)	111, 141, 1760
BmiI	GGNNCC	8 cut(s)	137, 294, 355, 484, 552, 1466, 1636, 1707
BmrFI	CCNGG	9 cut(s)	82, 83, 100, 115, 127, 307, 480, 679, 830
BmsI	GCATC	3 cut(s)	385, 883, 1968
BpiI	GAAGAC	2 cut(s)	1005, 1779
BplI	GAGNNNNNCTC	2 cut(s)	1685, 1717
BpmI	CTGGAG	1 cut(s)	349
Bpu10I	CCTNAGC	2 cut(s)	984, 1086
BpuEI	CTTGAG	8 cut(s)	89, 143, 475, 713, 757, 1205, 1546, 1568
BpuMI	CCSGG	7 cut(s)	82, 83, 100, 115, 127, 679, 830
Bsa29I	ATCGAT	2 cut(s)	804, 1452
BsaHI	GRCGYC	3 cut(s)	149, 354, 1284
BsaI	GGTCTC	1 cut(s)	341
BsaJI	CCNNGG	5 cut(s)	81, 82, 98, 180, 478
BsaWI	WCCGGW	3 cut(s)	34, 1461, 1855
BsaXI	ACNNNNNCTCC	6 cut(s)	405, 435, 680, 710, 1997, 2027
Bse118I	RCCGGY	2 cut(s)	138, 350
BseAI	TCCGGA	1 cut(s)	1855
BseBI	CCWGG	2 cut(s)	307, 480
BseCI	ATCGAT	2 cut(s)	804, 1452
BseDI	CCNNGG	5 cut(s)	81, 82, 98, 180, 478
BseGI	GGATG	2 cut(s)	1532, 1959
BseMII	CTCAG	2 cut(s)	1057, 1077
BseSI	GKGCMC	3 cut(s)	297, 373, 1588
BseX3I	CGGCCG	1 cut(s)	59
BseXI	GCAGC	6 cut(s)	105, 272, 388, 1246, 1249, 1252
BseYI	CCCAGC	3 cut(s)	11, 65, 372
Bsh1285I	CGRYCG	1 cut(s)	62
BshFI	GGCC	6 cut(s)	61, 113, 142, 305, 402, 1761
BshNI	GGYRCC	3 cut(s)	292, 353, 1705
BshVI	ATCGAT	2 cut(s)	804, 1452
BsiEI	CGRYCG	1 cut(s)	62
BsiHKAI	GWGCWC	1 cut(s)	415
BsiHKCI	CYCGRG	4 cut(s)	81, 88, 143, 672
BsmAI	GTCTC	3 cut(s)	140, 341, 1857
BsmBI	CGTCTC	1 cut(s)	140
BsnI	GGCC	6 cut(s)	61, 113, 142, 305, 402, 1761
Bso31I	GGTCTC	1 cut(s)	341
BsoBI	CYCGRG	4 cut(s)	81, 88, 143, 672
Bsp1286I	GDGCHC	8 cut(s)	82, 89, 297, 373, 415, 679, 1588, 1889
Bsp13I	TCCGGA	1 cut(s)	1855
Bsp143I	GATC	9 cut(s)	43, 168, 550, 1180, 1464, 1552, 1754, 1858, 2058
BspACI	CCGC	8 cut(s)	58, 62, 109, 205, 318, 424, 703, 769
BspANI	GGCC	6 cut(s)	61, 113, 142, 305, 402, 1761
BspCNI	CTCAG	2 cut(s)	1056, 1078
BspDI	ATCGAT	2 cut(s)	804, 1452
BspEI	TCCGGA	1 cut(s)	1855
BspLI	GGNNCC	8 cut(s)	137, 294, 355, 484, 552, 1466, 1636, 1707
BspPI	GGATC	7 cut(s)	51, 545, 558, 1459, 1472, 1560, 1866
BspT107I	GGYRCC	3 cut(s)	292, 353, 1705
BspTNI	GGTCTC	1 cut(s)	341
BsrBI	CCGCTC	2 cut(s)	58, 703
BsrFI	RCCGGY	2 cut(s)	138, 350
BssAI	RCCGGY	2 cut(s)	138, 350
BssECI	CCNNGG	5 cut(s)	81, 82, 98, 180, 478
BssMI	GATC	9 cut(s)	43, 168, 550, 1180, 1464, 1552, 1754, 1858, 2058
BssNI	GRCGYC	3 cut(s)	149, 354, 1284
Bst2UI	CCWGG	2 cut(s)	307, 480
Bst4CI	ACNGT	8 cut(s)	339, 1383, 1397, 1429, 1537, 1811, 1985, 2021
Bst6I	CTCTTC	4 cut(s)	237, 570, 833, 1053
BstACI	GRCGYC	3 cut(s)	149, 354, 1284
BstDEI	CTNAG	4 cut(s)	897, 984, 1043, 1086
BstENI	CCTNNNNNAGG	2 cut(s)	227, 396
BstF5I	GGATG	2 cut(s)	1532, 1959
BstH2I	RGCGCY	1 cut(s)	357
BstHHI	GCGC	3 cut(s)	356, 510, 1975
BstKTI	GATC	9 cut(s)	46, 171, 553, 1183, 1467, 1555, 1757, 1861, 2061
BstMAI	GTCTC	3 cut(s)	140, 341, 1857
BstMBI	GATC	9 cut(s)	43, 168, 550, 1180, 1464, 1552, 1754, 1858, 2058
BstMCI	CGRYCG	1 cut(s)	62
BstNI	CCWGG	2 cut(s)	307, 480
BstNSI	RCATGY	1 cut(s)	922
BstSCI	CCNGG	9 cut(s)	80, 81, 98, 113, 125, 305, 478, 677, 828
BstSFI	CTRYAG	1 cut(s)	335
BstSLI	GKGCMC	3 cut(s)	297, 373, 1588
BstV1I	GCAGC	6 cut(s)	105, 272, 388, 1246, 1249, 1252
BstV2I	GAAGAC	2 cut(s)	1005, 1779
BstX2I	RGATCY	6 cut(s)	43, 550, 1180, 1464, 1754, 2058
BstYI	RGATCY	6 cut(s)	43, 550, 1180, 1464, 1754, 2058
BstZI	CGGCCG	1 cut(s)	59
Bsu15I	ATCGAT	2 cut(s)	804, 1452
BsuRI	GGCC	6 cut(s)	61, 113, 142, 305, 402, 1761
BsuTUI	ATCGAT	2 cut(s)	804, 1452
BtrI	CACGTC	1 cut(s)	1054
BtsCI	GGATG	2 cut(s)	1532, 1959
BtsI	GCAGTG	1 cut(s)	1913
BtsIMutI	CAGTG	4 cut(s)	642, 1388, 1696, 1913
CaiI	CAGNNNCTG	1 cut(s)	1925
CciNI	GCGGCCGC	1 cut(s)	59
CfoI	GCGC	3 cut(s)	356, 510, 1975
Cfr10I	RCCGGY	2 cut(s)	138, 350
Cfr13I	GGNCC	3 cut(s)	111, 141, 1760
Cfr9I	CCCGGG	1 cut(s)	81
ClaI	ATCGAT	2 cut(s)	804, 1452
CseI	GACGC	4 cut(s)	157, 612, 1136, 2027
Csp6I	GTAC	3 cut(s)	581, 647, 1425
CviAII	CATG	8 cut(s)	298, 529, 745, 765, 782, 919, 1409, 2042
CviQI	GTAC	3 cut(s)	581, 647, 1425
DdeI	CTNAG	4 cut(s)	897, 984, 1043, 1086
DinI	GGCGCC	1 cut(s)	355
DpnI	GATC	9 cut(s)	45, 170, 552, 1182, 1466, 1554, 1756, 1860, 2060
DpnII	GATC	9 cut(s)	43, 168, 550, 1180, 1464, 1552, 1754, 1858, 2058
EaeI	YGGCCR	2 cut(s)	59, 303
EagI	CGGCCG	1 cut(s)	59
Eam1104I	CTCTTC	4 cut(s)	237, 570, 833, 1053
EarI	CTCTTC	4 cut(s)	237, 570, 833, 1053
EciI	GGCGGA	3 cut(s)	220, 413, 784
EclXI	CGGCCG	1 cut(s)	59
Eco24I	GRGCYC	4 cut(s)	82, 89, 679, 1889
Eco31I	GGTCTC	1 cut(s)	341
Eco32I	GATATC	2 cut(s)	1324, 1833
Eco52I	CGGCCG	1 cut(s)	59
Eco57I	CTGAAG	4 cut(s)	32, 474, 1029, 1458
Eco88I	CYCGRG	4 cut(s)	81, 88, 143, 672
EcoNI	CCTNNNNNAGG	2 cut(s)	227, 396
EcoRII	CCWGG	2 cut(s)	305, 478
EcoRV	GATATC	2 cut(s)	1324, 1833
EcoT38I	GRGCYC	4 cut(s)	82, 89, 679, 1889
EgeI	GGCGCC	1 cut(s)	355
EheI	GGCGCC	1 cut(s)	355
Esp3I	CGTCTC	1 cut(s)	140
FaeI	CATG	8 cut(s)	301, 532, 748, 768, 785, 922, 1412, 2045
FatI	CATG	8 cut(s)	297, 528, 744, 764, 781, 918, 1408, 2041
FauI	CCCGC	1 cut(s)	102
FauNDI	CATATG	1 cut(s)	1486
FokI	GGATG	2 cut(s)	1539, 1946
FriOI	GRGCYC	4 cut(s)	82, 89, 679, 1889
FspBI	CTAG	3 cut(s)	380, 1404, 2062
FspI	TGCGCA	2 cut(s)	509, 1974
GlaI	GCGC	3 cut(s)	355, 509, 1974
GsaI	CCCAGC	3 cut(s)	15, 69, 376
GsuI	CTGGAG	1 cut(s)	349
HaeII	RGCGCY	1 cut(s)	357
HaeIII	GGCC	6 cut(s)	61, 113, 142, 305, 402, 1761
HgaI	GACGC	4 cut(s)	157, 612, 1136, 2027
HhaI	GCGC	3 cut(s)	356, 510, 1975
Hin1I	GRCGYC	3 cut(s)	149, 354, 1284
Hin1II	CATG	8 cut(s)	301, 532, 748, 768, 785, 922, 1412, 2045
Hin6I	GCGC	3 cut(s)	354, 508, 1973
HinP1I	GCGC	3 cut(s)	354, 508, 1973
HincII	GTYRAC	1 cut(s)	1126
HindII	GTYRAC	1 cut(s)	1126
HindIII	AAGCTT	2 cut(s)	605, 1169
HphI	GGTGA	6 cut(s)	1367, 1505, 1514, 1563, 1598, 1908
Hpy166II	GTNNAC	3 cut(s)	1126, 1273, 1916
Hpy188I	TCNGA	8 cut(s)	43, 454, 574, 658, 849, 1046, 1161, 1894
Hpy8I	GTNNAC	3 cut(s)	1126, 1273, 1916
Hpy99I	CGWCG	3 cut(s)	366, 1257, 1643
HpyCH4III	ACNGT	8 cut(s)	339, 1383, 1397, 1429, 1537, 1811, 1985, 2021
HpyCH4IV	ACGT	3 cut(s)	1053, 1105, 1284
HpyCH4V	TGCA	9 cut(s)	398, 539, 764, 797, 908, 922, 1078, 1484, 1959
HpyF3I	CTNAG	4 cut(s)	897, 984, 1043, 1086
HpySE526I	ACGT	3 cut(s)	1053, 1105, 1284
Hsp92I	GRCGYC	3 cut(s)	149, 354, 1284
Hsp92II	CATG	8 cut(s)	301, 532, 748, 768, 785, 922, 1412, 2045
HspAI	GCGC	3 cut(s)	354, 508, 1973
KasI	GGCGCC	1 cut(s)	353
Kpn2I	TCCGGA	1 cut(s)	1855
KroI	GCCGGC	1 cut(s)	138
KroNI	GCCGGC	1 cut(s)	140
Kzo9I	GATC	9 cut(s)	43, 168, 550, 1180, 1464, 1552, 1754, 1858, 2058
LmnI	GCTCC	7 cut(s)	55, 135, 257, 410, 688, 700, 771
Lsp1109I	GCAGC	6 cut(s)	105, 272, 388, 1246, 1249, 1252
LweI	GCATC	3 cut(s)	385, 883, 1968
MaeI	CTAG	3 cut(s)	380, 1404, 2062
MaeII	ACGT	3 cut(s)	1053, 1105, 1284
MaeIII	GTNAC	2 cut(s)	1502, 1621
MalI	GATC	9 cut(s)	45, 170, 552, 1182, 1466, 1554, 1756, 1860, 2060
MbiI	CCGCTC	2 cut(s)	58, 703
MboI	GATC	9 cut(s)	43, 168, 550, 1180, 1464, 1552, 1754, 1858, 2058
MfeI	CAATTG	1 cut(s)	1479
MflI	RGATCY	6 cut(s)	43, 550, 1180, 1464, 1754, 2058
MhlI	GDGCHC	8 cut(s)	82, 89, 297, 373, 415, 679, 1588, 1889
Mly113I	GGCGCC	1 cut(s)	354
MlyI	GAGTC	6 cut(s)	32, 318, 850, 1441, 1553, 1916
MmeI	TCCRAC	3 cut(s)	543, 678, 1995
MroI	TCCGGA	1 cut(s)	1855
MroNI	GCCGGC	1 cut(s)	138
MroXI	GAANNNNTTC	2 cut(s)	500, 1107
MseI	TTAA	6 cut(s)	563, 879, 956, 1022, 1347, 2049
MspR9I	CCNGG	9 cut(s)	82, 83, 100, 115, 127, 307, 480, 679, 830
MunI	CAATTG	1 cut(s)	1479
MvaI	CCWGG	2 cut(s)	307, 480
NaeI	GCCGGC	1 cut(s)	140
NarI	GGCGCC	1 cut(s)	354
NciI	CCSGG	7 cut(s)	82, 83, 100, 115, 127, 679, 830
NdeI	CATATG	1 cut(s)	1486
NdeII	GATC	9 cut(s)	43, 168, 550, 1180, 1464, 1552, 1754, 1858, 2058
NgoMIV	GCCGGC	1 cut(s)	138
NlaIII	CATG	8 cut(s)	301, 532, 748, 768, 785, 922, 1412, 2045
NlaIV	GGNNCC	8 cut(s)	137, 294, 355, 484, 552, 1466, 1636, 1707
NmeAIII	GCCGAG	1 cut(s)	382
NmuCI	GTSAC	2 cut(s)	1502, 1621
NotI	GCGGCCGC	1 cut(s)	59
NsbI	TGCGCA	2 cut(s)	509, 1974
NspI	RCATGY	1 cut(s)	922
PaeR7I	CTCGAG	1 cut(s)	672
PcsI	WCGNNNNNNNCGW	1 cut(s)	177
PdiI	GCCGGC	1 cut(s)	140
PdmI	GAANNNNTTC	2 cut(s)	500, 1107
PfeI	GAWTC	7 cut(s)	501, 653, 682, 1031, 1449, 1603, 1930
PflFI	GACNNNGTC	1 cut(s)	224
PflMI	CCANNNNNTGG	1 cut(s)	1925
PleI	GAGTC	6 cut(s)	32, 318, 849, 1440, 1553, 1916
PluTI	GGCGCC	1 cut(s)	357
PpsI	GAGTC	6 cut(s)	32, 318, 849, 1440, 1553, 1916
PshBI	ATTAAT	1 cut(s)	956
Psp6I	CCWGG	2 cut(s)	305, 478
PspFI	CCCAGC	3 cut(s)	11, 65, 372
PspGI	CCWGG	2 cut(s)	305, 478
PspN4I	GGNNCC	8 cut(s)	137, 294, 355, 484, 552, 1466, 1636, 1707
PspPI	GGNCC	3 cut(s)	111, 141, 1760
PspXI	VCTCGAGB	1 cut(s)	672
PstNI	CAGNNNCTG	1 cut(s)	1925
PsuI	RGATCY	6 cut(s)	43, 550, 1180, 1464, 1754, 2058
PsyI	GACNNNGTC	1 cut(s)	224
RsaI	GTAC	3 cut(s)	582, 648, 1426
RsaNI	GTAC	3 cut(s)	581, 647, 1425
SaqAI	TTAA	6 cut(s)	563, 879, 956, 1022, 1347, 2049
Sau3AI	GATC	9 cut(s)	43, 168, 550, 1180, 1464, 1552, 1754, 1858, 2058
Sau96I	GGNCC	3 cut(s)	111, 141, 1760
SchI	GAGTC	6 cut(s)	32, 318, 850, 1441, 1553, 1916
ScrFI	CCNGG	9 cut(s)	82, 83, 100, 115, 127, 307, 480, 679, 830
SduI	GDGCHC	8 cut(s)	82, 89, 297, 373, 415, 679, 1588, 1889
SfaNI	GCATC	3 cut(s)	385, 883, 1968
SfcI	CTRYAG	1 cut(s)	335
SfoI	GGCGCC	1 cut(s)	355
Sfr274I	CTCGAG	1 cut(s)	672
SlaI	CTCGAG	1 cut(s)	672
SmaI	CCCGGG	1 cut(s)	83
SmlI	CTYRAG	9 cut(s)	104, 158, 490, 672, 692, 736, 1184, 1547, 1561
SmoI	CTYRAG	9 cut(s)	104, 158, 490, 672, 692, 736, 1184, 1547, 1561
SsiI	CCGC	8 cut(s)	58, 62, 109, 205, 318, 424, 703, 769
SspDI	GGCGCC	1 cut(s)	353
SspMI	CTAG	3 cut(s)	380, 1404, 2062
StyD4I	CCNGG	9 cut(s)	80, 81, 98, 113, 125, 305, 478, 677, 828
TaaI	ACNGT	8 cut(s)	339, 1383, 1397, 1429, 1537, 1811, 1985, 2021
TaiI	ACGT	3 cut(s)	1056, 1108, 1287
TaqI	TCGA	9 cut(s)	171, 228, 673, 726, 804, 1252, 1452, 1721, 1861
TaqII	GACCGA	1 cut(s)	1582
TatI	WGTACW	1 cut(s)	646
TauI	GCSGC	4 cut(s)	61, 64, 320, 706
TfiI	GAWTC	7 cut(s)	501, 653, 682, 1031, 1449, 1603, 1930
Tru1I	TTAA	6 cut(s)	563, 879, 956, 1022, 1347, 2049
Tru9I	TTAA	6 cut(s)	563, 879, 956, 1022, 1347, 2049
TscAI	CASTG	4 cut(s)	642, 1388, 1696, 1913
TseFI	GTSAC	2 cut(s)	1502, 1621
TseI	GCWGC	6 cut(s)	118, 260, 376, 1259, 1262, 1265
Tsp45I	GTSAC	2 cut(s)	1502, 1621
TspGWI	ACGGA	2 cut(s)	148, 379
TspMI	CCCGGG	1 cut(s)	81
TspRI	CASTG	4 cut(s)	642, 1388, 1696, 1913
Tth111I	GACNNNGTC	1 cut(s)	224
Van91I	CCANNNNNTGG	1 cut(s)	1925
VspI	ATTAAT	1 cut(s)	956
XagI	CCTNNNNNAGG	2 cut(s)	227, 396
XapI	RAATTY	2 cut(s)	789, 1419
XceI	RCATGY	1 cut(s)	922
XcmI	CCANNNNNNNNNTGG	1 cut(s)	526
XhoI	CTCGAG	1 cut(s)	672
XmaI	CCCGGG	1 cut(s)	81
XmnI	GAANNNNTTC	2 cut(s)	500, 1107
XspI	CTAG	3 cut(s)	380, 1404, 2062
ZraI	GACGTC	1 cut(s)	1285

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.