Rorug05G0179100

BEST Arabidopsis thaliana protein match is

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000074
Physical Location & Seq
Reverse (-)
17034266 .. 17041486
7221 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0179100.1

Sequence Viewer

Length: 2583 bp
ATGGTTAATGTGATGATCATGTTTGCTGGTTTTCAAGATCATCAGGAGAAAGCAAAGTACATTCTGATCATTAACCATGGGTTTAGGTTTGATCAACTCTTAATTTTCTTCCTGATCATTCTTTCAAGCTTGTGGAGTTGTCGTGTTGCTGCTGCAGCAGACAATATTCGGGACACACTCAAAATTGGCGACAGTCTCAATTCCTCAAGTGCTTTAGTTTCTGCCTCTGGGAAGTTCACTCTGCTTTTCTTGCCAAACGGTTCAAGTTCCAACTACAGGTATCTAAATATTAGGCGGTACAATGTAACTGATGCGAATAAGGCGTGGGTTGCCAACCGAGACTCACCTGTTTTATACCCTCTTGGAGTTCTTACCTTGGACTCCAACAACACATTAAAGATCATTACAAACAACGAAGGTGGCGGTGGCGATCCTCCTATAGTGCTTGGCTCTGCGCCAAAAAGTAGTAGTAATGTTGTGGCTACTCTGTTGGATTCTGGCAATTTTATCCTACAACAGCTGAACTCCGATGGATCAATGAAGCAGGTGTGGTGGCAAAGCTTTGATTATCCAACAGACACCTTTTTACCAGGCATGAAGTTAGGTGTCAACCATAGCAATGGGCACATTTGGTCTCTTACATCATGGACATCCGCTTACTACCCACCGCCGGGGCCTTTCACTCTAGATTGGGACCCGACTGCCCGCCAGTTGGAAATTCGGAGAGAAGGGGTGGTTTATTGGAGAAGCGGAAACTATAGTGCTACAACCAACAGATTCCAAAACATTTTGCCGAATGCGAAGGTTAGCTTCAGGTTTAGCATTGTTTCAAATGAGAATGAAGACTACCTCACTTACAGTTCTGAAGATGGTGCATATGAGTTACCAGAATGGTTTCTAAATTTCGATGGGAGGCTTTCTAATTATTATGGAGCGGGAATTGATATTGCACGAGCAGATCAGTGTGGAGGCTACAGCACAGATGAACTAGGGTGCCAGACAAGTGGCCGGCCAACTACCTGTATGGCAGATTTCGGCAGTCCATTTGTGCCAAAAAAGGGTTATTTTCAACCAATCACCTCAAGTTCAACTTCAAGATGCCCATACTCGCTCAACTTTGTATCAAACGGAAGTTACAGTGGTACTAGTATTGATTGTAAGAATACTTGTTTGCAAAACTGTGACTGCCTTGGATTCGACTTTCTATTTGATAATCAGACAGGATGCCGATTTTGGAGTGTGGACTGTGAATTCGTTGAAGACCGCACTCAACCTGGTAATGCAAGCAGTTTGGTTTTAACAAAGCTAATGCCAACAGCAAAATCACCAGCGCCAAAGTCACCACCAAGCAAAAGTGGTGCAACGCATAAATGGATTTGGATTGGGGTTGCTATTAGTGCTGCTCTAGTGATAATGGCCTTTTCCGTCTTGTGCTATCTACGAAGAAGAAGAAGAAGACAATCTAAACTTTCAGGTGAGGGTAAGATCGACCAGAATGAATTGCTGAACTTCAGGAGTTCTAAGAGGCCTACTGATTTGAATGGACTTCAAAATGATGGAAAGATGGGACATGATTTGAGTGTATTTAGCTATGCATCTGTGATGGCTGCCACAATCAACTTCGCTGAAGAAAACAAGCTTGGAGAAGGGGGCTTTGGACCTGTCTATAAGGGGAAATTGGCAACGGGAGAAGAAGTAGCTGTGAAGAGGCTTTCAAAATGTTCAGGGCAAGGAACACTAGAGTTTAAGAATGAATTGATCCTCATATATGAACTTCAACACACAAACCTTGTTCAGCTTTTTGGATTTTCCATTCACGGTGAAGAGAGGATGTTGATATATGAGTACATGCCAAACAAAAGTCTGGACTACTTTTTATTTGATTCAGTCAGAGGTGTTTTTCTAGATTGGAGAAAGCGTTTCAGCATAATTGAAGGAATTGCTCAAGGATTGCTTTATTTGCACAAATTCTCAAGAACAAGAGTAATTCATAGAGATTTAAAAGCCAGTAACGTACTACTTGATGAAAATATGAACCCCAAAATTTCGGATTTTGGTATGGCTAGGATTTTCTCCATTAATGAACTGGAAGCAAATACTAGTAGGATTGTTGGGACACGTGGTTACATGCCTCCTGAGTACGCAATGGAAGGAATTTTCTCTACAAAATCCGATGTCTACAGTTTTGGAGTGTTGGTGCTTGAAATCATAAGTGGTAGGAAAAACAATAGCTTCTACAATGATGATCGCGCCATCAATTTAGTAGGATATGCATGGGAGTTGTGGAAAGAAGGCGCAGGGCTACAACTAATGGATCCAGCACTAGCTGATTCGTGTACTAACAAAGATCAACTATTAAGATGCGTTCAAGTTGGTCTTCTATGCGTGGAGGATAGTGCAGCGAATCGACCTACCATGTCAGATGTGCTCTCCGGGTTGACAAATGAAAGCTCACCATTACCTGCACCTACAAAGCCAGCATTTTCTACAGATAGACATGCGGTCACCAGTACTATAGCTGAAAAGGAACCACAAATTTTATCTGTAAATGATCTGACCATTTCCGCTTGTGATGGACGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

860

Amino Acids

95.55

Weight (kDa)

6.32

Isoelectric Point (pI)

44.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 109 - 216 4.2e-25 D-mannose binding lectin
Pkinase PF00069 542 - 742 9.8e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 544 - 748 2.8e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 535
Acc36I ACCTGC 2 cut(s) 535, 2470
AccB1I GGYRCC 1 cut(s) 993
AccBSI CCGCTC 1 cut(s) 935
AccI GTMKAC 1 cut(s) 2178
AccII CGCG 1 cut(s) 2250
AclWI GGATC 5 cut(s) 425, 541, 1753, 2309, 2322
AcoI YGGCCR 2 cut(s) 1006, 1010
AcsI RAATTY 7 cut(s) 717, 901, 1250, 1967, 2043, 2154, 2535
AcuI CTGAAG 4 cut(s) 796, 885, 1495, 1647
AcvI CACGTG 1 cut(s) 2120
AfaI GTAC 8 cut(s) 59, 299, 1144, 1847, 2016, 2141, 2338, 2512
AfiI CCNNNNNNNGG 5 cut(s) 276, 670, 671, 712, 1058
AflIII ACRYGT 1 cut(s) 2117
AhdI GACNNNNNGTC 1 cut(s) 2501
AhlI ACTAGT 2 cut(s) 1145, 2099
AjnI CCWGG 2 cut(s) 589, 1273
AjuI GAANNNNNNNTTGG 4 cut(s) 1623, 1638, 1655, 1670
Alw21I GWGCWC 1 cut(s) 2430
Alw26I GTCTC 3 cut(s) 200, 333, 639
AlwI GGATC 5 cut(s) 425, 541, 1753, 2309, 2322
AoxI GGCC 5 cut(s) 674, 1006, 1010, 1416, 1526
ApeKI GCWGC 6 cut(s) 149, 152, 155, 1400, 1607, 2399
ApoI RAATTY 7 cut(s) 717, 901, 1250, 1967, 2043, 2154, 2535
ArsI GACNNNNNNTTYG 4 cut(s) 1190, 1222, 1235, 1267
AseI ATTAAT 1 cut(s) 2079
Asp700I GAANNNNTTC 1 cut(s) 894
AspLEI GCGC 4 cut(s) 457, 1333, 2252, 2297
AspS9I GGNCC 3 cut(s) 674, 694, 1658
AsuC2I CCSGG 2 cut(s) 672, 2434
AsuHPI GGTGA 8 cut(s) 336, 1069, 1317, 1332, 1487, 1832, 2445, 2497
AvaII GGWCC 2 cut(s) 694, 1658
BaeGI GKGCMC 1 cut(s) 627
BamHI GGATCC 1 cut(s) 2314
BanI GGYRCC 1 cut(s) 993
BauI CACGAG 1 cut(s) 951
BbrPI CACGTG 1 cut(s) 2120
BbsI GAAGAC 4 cut(s) 849, 1266, 1462, 2369
Bbv12I GWGCWC 1 cut(s) 2430
BbvI GCAGC 6 cut(s) 136, 139, 167, 1387, 1594, 2411
BccI CCATC 8 cut(s) 524, 863, 902, 1550, 1558, 1597, 2261, 2567
BciT130I CCWGG 2 cut(s) 591, 1275
BclI TGATCA 4 cut(s) 15, 66, 91, 114
BcnI CCSGG 2 cut(s) 672, 2434
BcoDI GTCTC 3 cut(s) 200, 333, 639
BcuI ACTAGT 2 cut(s) 1145, 2099
BfaI CTAG 9 cut(s) 686, 989, 1146, 1406, 1739, 1904, 2064, 2100, 2324
BfmI CTRYAG 8 cut(s) 153, 274, 438, 757, 973, 2179, 2487, 2514
BfoI RGCGCY 1 cut(s) 1334
BfuAI ACCTGC 2 cut(s) 535, 2470
BisI GCNGC 6 cut(s) 150, 153, 156, 1401, 1608, 2400
BlsI GCNGC 6 cut(s) 151, 154, 157, 1402, 1609, 2401
BmcAI AGTACT 1 cut(s) 2512
Bme1390I CCNGG 4 cut(s) 591, 672, 1275, 2434
Bme18I GGWCC 2 cut(s) 694, 1658
BmeRI GACNNNNNGTC 1 cut(s) 2501
BmgT120I GGNCC 3 cut(s) 674, 694, 1658
BmiI GGNNCC 6 cut(s) 675, 695, 696, 995, 2316, 2529
BmrFI CCNGG 4 cut(s) 591, 672, 1275, 2434
BmsI GCATC 5 cut(s) 301, 1088, 1214, 1604, 2351
BpiI GAAGAC 4 cut(s) 849, 1266, 1462, 2369
BpuEI CTTGAG 4 cut(s) 190, 1066, 1929, 1957
BpuMI CCSGG 2 cut(s) 672, 2434
BsaAI YACGTR 1 cut(s) 2120
BsaI GGTCTC 1 cut(s) 639
BsaJI CCNNGG 4 cut(s) 76, 375, 671, 1189
BsaXI ACNNNNNCTCC 8 cut(s) 127, 157, 1680, 1710, 1903, 1933, 2181, 2211
Bsc4I CCNNNNNNNGG 5 cut(s) 276, 670, 671, 712, 1058
Bse118I RCCGGY 1 cut(s) 1008
Bse1I ACTGG 4 cut(s) 709, 2007, 2091, 2508
Bse3DI GCAATG 2 cut(s) 625, 2151
BseBI CCWGG 2 cut(s) 591, 1275
BseDI CCNNGG 4 cut(s) 76, 375, 671, 1189
BseGI GGATG 3 cut(s) 650, 1229, 1836
BseLI CCNNNNNNNGG 5 cut(s) 276, 670, 671, 712, 1058
BseMI GCAATG 2 cut(s) 625, 2151
BseMII CTCAG 1 cut(s) 2127
BseNI ACTGG 4 cut(s) 709, 2007, 2091, 2508
BseSI GKGCMC 1 cut(s) 627
BseXI GCAGC 6 cut(s) 136, 139, 167, 1387, 1594, 2411
BsgI GTGCAG 2 cut(s) 2418, 2448
Bsh1236I CGCG 1 cut(s) 2250
BshFI GGCC 5 cut(s) 676, 1008, 1012, 1418, 1528
BshNI GGYRCC 1 cut(s) 993
BsiHKAI GWGCWC 1 cut(s) 2430
BsiSI CCGG 3 cut(s) 671, 1009, 2433
BslFI GGGAC 4 cut(s) 185, 707, 1581, 2128
BslI CCNNNNNNNGG 5 cut(s) 276, 670, 671, 712, 1058
BsmAI GTCTC 3 cut(s) 200, 333, 639
BsmFI GGGAC 4 cut(s) 185, 707, 1581, 2128
BsmI GAATGC 1 cut(s) 802
BsnI GGCC 5 cut(s) 676, 1008, 1012, 1418, 1528
Bso31I GGTCTC 1 cut(s) 639
Bsp1286I GDGCHC 2 cut(s) 627, 2430
Bsp19I CCATGG 1 cut(s) 76
BspANI GGCC 5 cut(s) 676, 1008, 1012, 1418, 1528
BspCNI CTCAG 1 cut(s) 2128
BspFNI CGCG 1 cut(s) 2250
BspLI GGNNCC 6 cut(s) 675, 695, 696, 995, 2316, 2529
BspMAI CTGCAG 1 cut(s) 157
BspMI ACCTGC 2 cut(s) 535, 2470
BspPI GGATC 5 cut(s) 425, 541, 1753, 2309, 2322
BspT107I GGYRCC 1 cut(s) 993
BspTNI GGTCTC 1 cut(s) 639
BsrBI CCGCTC 1 cut(s) 935
BsrDI GCAATG 2 cut(s) 625, 2151
BsrFI RCCGGY 1 cut(s) 1008
BsrI ACTGG 4 cut(s) 709, 2007, 2091, 2508
BssAI RCCGGY 1 cut(s) 1008
BssECI CCNNGG 4 cut(s) 76, 375, 671, 1189
BssSI CACGAG 1 cut(s) 951
BssT1I CCWWGG 3 cut(s) 76, 375, 1189
Bst2BI CACGAG 1 cut(s) 951
Bst2UI CCWGG 2 cut(s) 591, 1275
Bst4CI ACNGT 8 cut(s) 194, 260, 860, 1139, 1181, 1247, 1820, 2183
Bst6I CTCTTC 2 cut(s) 1700, 1818
BstBAI YACGTR 1 cut(s) 2120
BstC8I GCNNGC 4 cut(s) 706, 1010, 1285, 2478
BstDEI CTNAG 2 cut(s) 1521, 2136
BstDSI CCRYGG 1 cut(s) 76
BstEII GGTNACC 1 cut(s) 2503
BstF5I GGATG 3 cut(s) 650, 1229, 1836
BstFNI CGCG 1 cut(s) 2250
BstH2I RGCGCY 1 cut(s) 1334
BstHHI GCGC 4 cut(s) 457, 1333, 2252, 2297
BstMAI GTCTC 3 cut(s) 200, 333, 639
BstMWI GCNNNNNNNGC 6 cut(s) 155, 250, 320, 329, 1397, 1960
BstNI CCWGG 2 cut(s) 591, 1275
BstNSI RCATGY 3 cut(s) 1852, 2131, 2501
BstPI GGTNACC 1 cut(s) 2503
BstSCI CCNGG 4 cut(s) 589, 670, 1273, 2432
BstSFI CTRYAG 8 cut(s) 153, 274, 438, 757, 973, 2179, 2487, 2514
BstSLI GKGCMC 1 cut(s) 627
BstUI CGCG 1 cut(s) 2250
BstV1I GCAGC 6 cut(s) 136, 139, 167, 1387, 1594, 2411
BstV2I GAAGAC 4 cut(s) 849, 1266, 1462, 2369
BstX2I RGATCY 1 cut(s) 2314
BstXI CCANNNNNNTGG 2 cut(s) 620, 1004
BstYI RGATCY 1 cut(s) 2314
BsuRI GGCC 5 cut(s) 676, 1008, 1012, 1418, 1528
BtgI CCRYGG 1 cut(s) 76
BtsCI GGATG 3 cut(s) 650, 1229, 1836
BtsIMutI CAGTG 2 cut(s) 968, 1144
BveI ACCTGC 2 cut(s) 535, 2470
Cac8I GCNNGC 4 cut(s) 706, 1010, 1285, 2478
CfoI GCGC 4 cut(s) 457, 1333, 2252, 2297
Cfr10I RCCGGY 1 cut(s) 1008
Cfr13I GGNCC 3 cut(s) 674, 694, 1658
CsiI ACCWGGT 1 cut(s) 1273
Csp6I GTAC 8 cut(s) 58, 298, 1143, 1846, 2015, 2140, 2337, 2511
CspCI CAANNNNNGTGG 2 cut(s) 400, 435
CviQI GTAC 8 cut(s) 58, 298, 1143, 1846, 2015, 2140, 2337, 2511
DdeI CTNAG 2 cut(s) 1521, 2136
DraI TTTAAA 1 cut(s) 2001
DriI GACNNNNNGTC 1 cut(s) 2501
EaeI YGGCCR 2 cut(s) 1006, 1010
Eam1104I CTCTTC 2 cut(s) 1700, 1818
Eam1105I GACNNNNNGTC 1 cut(s) 2501
EarI CTCTTC 2 cut(s) 1700, 1818
Eco130I CCWWGG 3 cut(s) 76, 375, 1189
Eco147I AGGCCT 1 cut(s) 1528
Eco31I GGTCTC 1 cut(s) 639
Eco47I GGWCC 2 cut(s) 694, 1658
Eco57I CTGAAG 4 cut(s) 796, 885, 1495, 1647
Eco72I CACGTG 1 cut(s) 2120
Eco91I GGTNACC 1 cut(s) 2503
EcoO109I RGGNCCY 2 cut(s) 674, 694
EcoO65I GGTNACC 1 cut(s) 2503
EcoRI GAATTC 1 cut(s) 1250
EcoRII CCWGG 2 cut(s) 589, 1273
EcoT14I CCWWGG 3 cut(s) 76, 375, 1189
EcoT22I ATGCAT 2 cut(s) 1597, 2275
ErhI CCWWGG 3 cut(s) 76, 375, 1189
FalI AAGNNNNNCTT 8 cut(s) 794, 826, 1075, 1107, 1938, 1970, 2361, 2393
FaqI GGGAC 4 cut(s) 185, 707, 1581, 2128
FauI CCCGC 2 cut(s) 713, 928
FauNDI CATATG 1 cut(s) 877
FbaI TGATCA 4 cut(s) 15, 66, 91, 114
FblI GTMKAC 1 cut(s) 2178
Fnu4HI GCNGC 6 cut(s) 150, 153, 156, 1401, 1608, 2400
FokI GGATG 3 cut(s) 637, 1236, 1843
FseI GGCCGGCC 1 cut(s) 1012
Fsp4HI GCNGC 6 cut(s) 150, 153, 156, 1401, 1608, 2400
FspBI CTAG 9 cut(s) 686, 989, 1146, 1406, 1739, 1904, 2064, 2100, 2324
GlaI GCGC 4 cut(s) 456, 1332, 2251, 2296
GluI GCNGC 6 cut(s) 150, 153, 156, 1401, 1608, 2400
HaeII RGCGCY 1 cut(s) 1334
HaeIII GGCC 5 cut(s) 676, 1008, 1012, 1418, 1528
HapII CCGG 3 cut(s) 671, 1009, 2433
HhaI GCGC 4 cut(s) 457, 1333, 2252, 2297
Hin6I GCGC 4 cut(s) 455, 1331, 2250, 2295
HinP1I GCGC 4 cut(s) 455, 1331, 2250, 2295
HincII GTYRAC 2 cut(s) 610, 2439
HindII GTYRAC 2 cut(s) 610, 2439
HindIII AAGCTT 3 cut(s) 127, 559, 1637
HinfI GANTC 8 cut(s) 341, 380, 494, 777, 1194, 1883, 2330, 2404
HpaII CCGG 3 cut(s) 671, 1009, 2433
HphI GGTGA 8 cut(s) 336, 1069, 1317, 1332, 1487, 1832, 2445, 2497
Hpy166II GTNNAC 6 cut(s) 237, 610, 1243, 2179, 2337, 2439
Hpy8I GTNNAC 6 cut(s) 237, 610, 1243, 2179, 2337, 2439
HpyAV CCTTC 7 cut(s) 410, 722, 796, 1640, 1928, 2144, 2285
HpyCH4III ACNGT 8 cut(s) 194, 260, 860, 1139, 1181, 1247, 1820, 2183
HpyCH4IV ACGT 3 cut(s) 2013, 2119, 2578
HpyF10VI GCNNNNNNNGC 6 cut(s) 155, 250, 320, 329, 1397, 1960
HpyF3I CTNAG 2 cut(s) 1521, 2136
HpySE526I ACGT 3 cut(s) 2013, 2119, 2578
HspAI GCGC 4 cut(s) 455, 1331, 2250, 2295
KflI GGGWCCC 1 cut(s) 694
KroI GCCGGC 1 cut(s) 1008
KroNI GCCGGC 1 cut(s) 1010
Ksp22I TGATCA 4 cut(s) 15, 66, 91, 114
LmnI GCTCC 1 cut(s) 932
Lsp1109I GCAGC 6 cut(s) 136, 139, 167, 1387, 1594, 2411
LweI GCATC 5 cut(s) 301, 1088, 1214, 1604, 2351
MabI ACCWGGT 1 cut(s) 1273
MaeI CTAG 9 cut(s) 686, 989, 1146, 1406, 1739, 1904, 2064, 2100, 2324
MaeII ACGT 3 cut(s) 2013, 2119, 2578
MaeIII GTNAC 8 cut(s) 304, 882, 1133, 1181, 1338, 2009, 2123, 2503
MbiI CCGCTC 1 cut(s) 935
MflI RGATCY 1 cut(s) 2314
MhlI GDGCHC 2 cut(s) 627, 2430
MlyI GAGTC 2 cut(s) 335, 374
MmeI TCCRAC 5 cut(s) 294, 408, 471, 596, 693
Mph1103I ATGCAT 2 cut(s) 1597, 2275
MroNI GCCGGC 1 cut(s) 1008
MroXI GAANNNNTTC 1 cut(s) 894
MslI CAYNNNNRTG 1 cut(s) 618
MspA1I CMGCKG 1 cut(s) 520
MspI CCGG 3 cut(s) 671, 1009, 2433
MspR9I CCNGG 4 cut(s) 591, 672, 1275, 2434
Mva1269I GAATGC 1 cut(s) 802
MvaI CCWGG 2 cut(s) 591, 1275
MvnI CGCG 1 cut(s) 2250
MwoI GCNNNNNNNGC 6 cut(s) 155, 250, 320, 329, 1397, 1960
NaeI GCCGGC 1 cut(s) 1010
NciI CCSGG 2 cut(s) 672, 2434
NcoI CCATGG 1 cut(s) 76
NdeI CATATG 1 cut(s) 877
NgoMIV GCCGGC 1 cut(s) 1008
NlaIV GGNNCC 6 cut(s) 675, 695, 696, 995, 2316, 2529
NmuCI GTSAC 3 cut(s) 1181, 1338, 2503
NsiI ATGCAT 2 cut(s) 1597, 2275
NspI RCATGY 3 cut(s) 1852, 2131, 2501
PaqCI CACCTGC 1 cut(s) 535
PceI AGGCCT 1 cut(s) 1528
PctI GAATGC 1 cut(s) 802
PdiI GCCGGC 1 cut(s) 1010
PdmI GAANNNNTTC 1 cut(s) 894
PfeI GAWTC 6 cut(s) 494, 777, 1194, 1883, 2330, 2404
PkrI GCNGC 6 cut(s) 151, 154, 157, 1402, 1609, 2401
PleI GAGTC 2 cut(s) 335, 374
PmaCI CACGTG 1 cut(s) 2120
PmlI CACGTG 1 cut(s) 2120
PpsI GAGTC 2 cut(s) 335, 374
Ppu21I YACGTR 1 cut(s) 2120
PpuMI RGGWCCY 1 cut(s) 694
PshBI ATTAAT 1 cut(s) 2079
Psp5II RGGWCCY 1 cut(s) 694
Psp6I CCWGG 2 cut(s) 589, 1273
PspCI CACGTG 1 cut(s) 2120
PspEI GGTNACC 1 cut(s) 2503
PspGI CCWGG 2 cut(s) 589, 1273
PspN4I GGNNCC 6 cut(s) 675, 695, 696, 995, 2316, 2529
PspPI GGNCC 3 cut(s) 674, 694, 1658
PspPPI RGGWCCY 1 cut(s) 694
PstI CTGCAG 1 cut(s) 157
PsuI RGATCY 1 cut(s) 2314
PvuII CAGCTG 1 cut(s) 520
RigI GGCCGGCC 1 cut(s) 1012
RsaI GTAC 8 cut(s) 59, 299, 1144, 1847, 2016, 2141, 2338, 2512
RsaNI GTAC 8 cut(s) 58, 298, 1143, 1846, 2015, 2140, 2337, 2511
RseI CAYNNNNRTG 1 cut(s) 618
SatI GCNGC 6 cut(s) 150, 153, 156, 1401, 1608, 2400
Sau96I GGNCC 3 cut(s) 674, 694, 1658
ScaI AGTACT 1 cut(s) 2512
SchI GAGTC 2 cut(s) 335, 374
ScrFI CCNGG 4 cut(s) 591, 672, 1275, 2434
SduI GDGCHC 2 cut(s) 627, 2430
SexAI ACCWGGT 1 cut(s) 1273
SfaNI GCATC 5 cut(s) 301, 1088, 1214, 1604, 2351
SfcI CTRYAG 8 cut(s) 153, 274, 438, 757, 973, 2179, 2487, 2514
SinI GGWCC 2 cut(s) 694, 1658
SmiMI CAYNNNNRTG 1 cut(s) 618
SmlI CTYRAG 4 cut(s) 205, 1081, 1944, 1972
SmoI CTYRAG 4 cut(s) 205, 1081, 1944, 1972
SpeI ACTAGT 2 cut(s) 1145, 2099
SseBI AGGCCT 1 cut(s) 1528
SspI AATATT 2 cut(s) 166, 289
SspMI CTAG 9 cut(s) 686, 989, 1146, 1406, 1739, 1904, 2064, 2100, 2324
StuI AGGCCT 1 cut(s) 1528
StyD4I CCNGG 4 cut(s) 589, 670, 1273, 2432
StyI CCWWGG 3 cut(s) 76, 375, 1189
TaaI ACNGT 8 cut(s) 194, 260, 860, 1139, 1181, 1247, 1820, 2183
TaiI ACGT 3 cut(s) 2016, 2122, 2581
TaqI TCGA 4 cut(s) 906, 1197, 1488, 2407
TatI WGTACW 4 cut(s) 57, 1845, 2336, 2510
TfiI GAWTC 6 cut(s) 494, 777, 1194, 1883, 2330, 2404
TscAI CASTG 2 cut(s) 968, 1144
TseFI GTSAC 3 cut(s) 1181, 1338, 2503
TseI GCWGC 6 cut(s) 149, 152, 155, 1400, 1607, 2399
Tsp45I GTSAC 3 cut(s) 1181, 1338, 2503
TspGWI ACGGA 2 cut(s) 1143, 1414
TspRI CASTG 2 cut(s) 968, 1144
VpaK11BI GGWCC 2 cut(s) 694, 1658
VspI ATTAAT 1 cut(s) 2079
XapI RAATTY 7 cut(s) 717, 901, 1250, 1967, 2043, 2154, 2535
XbaI TCTAGA 2 cut(s) 685, 1903
XceI RCATGY 3 cut(s) 1852, 2131, 2501
XcmI CCANNNNNNNNNTGG 1 cut(s) 2083
XmiI GTMKAC 1 cut(s) 2178
XmnI GAANNNNTTC 1 cut(s) 894
XspI CTAG 9 cut(s) 686, 989, 1146, 1406, 1739, 1904, 2064, 2100, 2324
ZrmI AGTACT 1 cut(s) 2512
Zsp2I ATGCAT 2 cut(s) 1597, 2275
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.