Rmu_ssc0000161.1_g000026

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000161.1
OG0000074
Physical Location & Seq
Forward (+)
104216 .. 110372
6157 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000161.1_g000026.1.cds

Sequence Viewer

Length: 2460 bp
atggtgataagaataaggtgtttaggaagagatttgcttcgtggaatgaggatatctcgaactgactgccccacccagttcatggttatgtggtctaatcaccaagatttgttctatgtttctaagtttgtgacgcagcacaatcacgatcttgctatcggccctgaagttcatttccttcgctcccaccgtaatgttaagagacacgacattgcacaggttgagtccctcctgcaagcacatgtctctactagtcgagcaaatgaatttctttcccaaaagtcctatggatatcacaacatgcgattcactgagaaggatctttacaacaagcttcgtccaaagaatatgaaatatgatgcggagggtgatgcagaaaccgctgtaagaaggatgaaagcaaagggatcgaccgagaaagaattctggtttgagtacacaattgataaagacaggaggcttgcaaacatgttttggcgggaccatcaatcacttttggactacattgcgtacggggatgtgttgattgtagacagtacttacaagaccaacaggtatagtaagcctatggtgttgttcgtcgggtgcaacaatcaccgggccaccgttgtgtttggtattgcacttgtatgtgatgagaaagaggaaacttacgattgggtatttaatcagttcattgattcaatgcaacaaaaaaggcccttatcagtcattacagacggggacgaagctatgaagaatgctcttgagcgcgtcatgccccaaacgcgtcacagactctgtgcctggcacattggtagaaacattggccagaacctaaactgtgaagaagttatggaaggtattaggcaattgatgtttgcgttggtaaccgtacccgattgggagtctagatggcagtctcttattttgaataatgggcttgaaaacaatgcgtgggtggcttctctttataataagcgggatcgctgggcggaggcttattttagaggccactttttcggaggtatgtgtggaacacaaagttgcgagggtatgaattgtcagtttaaaaagcatatctccaggtatacaaagttgtctgatgttatgccacgattggggtggaaattgaatcggttaagggatcgtgtcatgcgggacaacttcaacataaaaaatagtacccctttgtttgatactcatatgaggggcttggaggagcaggcgtgcagaatatttacacatgacatatttattatgattaagtctcaaatcaaatttgaggggagaggcaacaatggaaacccggagtggttctgctcgtgcaagatgtttgagtccgacggcattccttgtgcgcacctgttctgtgtaatgaaagccgagttggtttcaaatttcccaaactgtctcattttgaagcgatggactcgtttagttggggaaacaacgttagcccctgcgatatcggtaatgtccaatgataagtctgcccagagtgcaagtcccacagttgtgaaggacccgttgatgttaagaacgaagggaacgttgagcaacagacaagggcatgccgacagtcaaggcaatggacattgttacaccccatatctgatataccctcattattcagttgcatggaattccttatggttaccgtttgcggggcgcctcaacccgctcttgacactagggactcaggattgtggagttttggctgtgaaagtccggatcgaagcaaggtttgctccggttgcagttttggggtttcgccgatttccggccattccggccacctccggccaccaggttagcatcgaaggtttggtttttgatgatgctagtgccggagtttggtggtcatcggaggaggtcgccgccggcgcgtggggaccacgcgccgccactgtagattgcgcgtggaggcgcgtaaagcagtgtgggtcccgcagggccacttcggattccagggtggaattgggggcgggtcttgtcagttggtatcagagcactaggtttctagattctgtagacttccttacttccttgctactatatatgcttaatgacgcctggtacctcccgagtgatggcccgaccgcggcggatccccatcgtgtgctcttcggtactatggctcgaaatcgccgagcacgtgagagaactccggttggggaagatgagccgatacctagggggtttgctgattcttttggacagttctttcggcagattgccgcagcactccccgggtcacgtactgactatccacccatccaaactctatcggtggttcgtcacgaatgggaaccatcagttctcgacttttcgtgtgcggggagtgatcacatttcaagtccttcgagcacaggtttacctacaaactactcgcagccaaccactggccaacccaaaagatgtatatcaaatcagcttaaggattgcatgtggcctgatatggagtttcccctgttatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

819

Amino Acids

93.59

Weight (kDa)

8.81

Isoelectric Point (pI)

44.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 954
Acc16I TGCGCA 1 cut(s) 1341
Acc65I GGTACC 1 cut(s) 2058
AccB1I GGYRCC 2 cut(s) 1650, 2058
AccB7I CCANNNNNTGG 2 cut(s) 82, 2384
AccBSI CCGCTC 1 cut(s) 1663
AccI GTMKAC 3 cut(s) 531, 1070, 2013
AccII CGCG 7 cut(s) 753, 769, 1868, 1881, 1901, 1911, 2084
AccIII TCCGGA 1 cut(s) 1710
AclI AACGTT 2 cut(s) 1433, 1532
AclWI GGATC 7 cut(s) 327, 415, 972, 1134, 1721, 2084, 2097
AcoI YGGCCR 5 cut(s) 808, 1764, 1773, 1783, 2386
AcsI RAATTY 5 cut(s) 266, 422, 1259, 1378, 1624
AcuI CTGAAG 1 cut(s) 186
AcvI CACGTG 1 cut(s) 2138
AcyI GRCGYC 2 cut(s) 1651, 2052
AfaI GTAC 8 cut(s) 437, 512, 538, 876, 1165, 2060, 2113, 2242
AfiI CCNNNNNNNGG 9 cut(s) 82, 1100, 1646, 1762, 1836, 1869, 2072, 2083, 2384
AflII CTTAAG 1 cut(s) 2417
AflIII ACRYGT 3 cut(s) 241, 468, 767
AgsI TTSAA 8 cut(s) 684, 913, 926, 1114, 1150, 1377, 1402, 2337
AhlI ACTAGT 1 cut(s) 251
AjnI CCWGG 5 cut(s) 785, 1064, 1788, 1949, 2054
AjuI GAANNNNNNNTTGG 2 cut(s) 1352, 1384
AleI CACNNNNGTG 2 cut(s) 608, 1496
AluBI AGCT 3 cut(s) 334, 731, 2416
AluI AGCT 3 cut(s) 334, 731, 2416
Alw21I GWGCWC 4 cut(s) 1994, 2106, 2137, 2351
Alw26I GTCTC 5 cut(s) 196, 250, 906, 1254, 1397
AlwI GGATC 7 cut(s) 327, 415, 972, 1134, 1721, 2084, 2097
AlwNI CAGNNNCTG 1 cut(s) 780
Ama87I CYCGRG 2 cut(s) 2065, 2231
Aor13HI TCCGGA 1 cut(s) 1710
ApeKI GCWGC 3 cut(s) 136, 2222, 2374
ApoI RAATTY 5 cut(s) 266, 422, 1259, 1378, 1624
ArsI GACNNNNNNTTYG 2 cut(s) 2190, 2222
Asp700I GAANNNNTTC 1 cut(s) 422
Asp718I GGTACC 1 cut(s) 2058
AspA2I CCTAGG 1 cut(s) 2174
AspLEI GCGC 7 cut(s) 753, 1342, 1653, 1868, 1883, 1901, 1911
AspS9I GGNCC 9 cut(s) 161, 481, 600, 699, 1504, 1874, 1926, 1935, 2075
AsuC2I CCSGG 4 cut(s) 599, 1289, 2232, 2233
AsuHPI GGTGA 4 cut(s) 16, 92, 380, 587
AvaI CYCGRG 2 cut(s) 2065, 2231
AvaII GGWCC 4 cut(s) 481, 1504, 1874, 1926
AvrII CCTAGG 1 cut(s) 2174
BalI TGGCCA 2 cut(s) 810, 2388
BamHI GGATCC 1 cut(s) 2089
BanI GGYRCC 2 cut(s) 1650, 2058
BarI GAAGNNNNNNTAC 2 cut(s) 308, 340
BauI CACGAG 1 cut(s) 1303
BbrPI CACGTG 1 cut(s) 2138
Bbv12I GWGCWC 4 cut(s) 1994, 2106, 2137, 2351
BbvI GCAGC 3 cut(s) 148, 2234, 2386
BccI CCATC 7 cut(s) 492, 888, 1401, 2066, 2103, 2264, 2302
BceAI ACGGC 1 cut(s) 1342
BcgI CGANNNNNNTGC 4 cut(s) 48, 82, 390, 424
BciT130I CCWGG 5 cut(s) 787, 1066, 1790, 1951, 2056
BclI TGATCA 1 cut(s) 2326
BcnI CCSGG 4 cut(s) 599, 1289, 2232, 2233
BcoDI GTCTC 5 cut(s) 196, 250, 906, 1254, 1397
BcuI ACTAGT 1 cut(s) 251
BfaI CTAG 7 cut(s) 252, 891, 1673, 1824, 1995, 2003, 2175
BfmI CTRYAG 2 cut(s) 1890, 2010
BfoI RGCGCY 1 cut(s) 1654
BfrI CTTAAG 1 cut(s) 2417
BglI GCCNNNNNGGC 1 cut(s) 1772
BisI GCNGC 7 cut(s) 137, 1860, 1884, 2085, 2220, 2223, 2375
BlnI CCTAGG 1 cut(s) 2174
BlsI GCNGC 7 cut(s) 138, 1861, 1885, 2086, 2221, 2224, 2376
BmcAI AGTACT 1 cut(s) 538
Bme1390I CCNGG 9 cut(s) 599, 787, 1066, 1289, 1790, 1951, 2056, 2232, 2233
Bme18I GGWCC 4 cut(s) 481, 1504, 1874, 1926
BmeT110I CYCGRG 2 cut(s) 2065, 2231
BmgT120I GGNCC 9 cut(s) 161, 481, 600, 699, 1504, 1874, 1926, 1935, 2075
BmiI GGNNCC 9 cut(s) 482, 1506, 1652, 1875, 1927, 1928, 2060, 2091, 2292
BmrFI CCNGG 9 cut(s) 599, 787, 1066, 1289, 1790, 1951, 2056, 2232, 2233
BmrI ACTGGG 1 cut(s) 70
BmsI GCATC 4 cut(s) 349, 361, 1806, 1810
BmuI ACTGGG 1 cut(s) 70
BplI GAGNNNNNCTC 2 cut(s) 40, 72
BpmI CTGGAG 1 cut(s) 1048
BpuEI CTTGAG 1 cut(s) 767
BpuMI CCSGG 4 cut(s) 599, 1289, 2232, 2233
BsaAI YACGTR 2 cut(s) 2138, 2240
BsaBI GATNNNNATC 2 cut(s) 2094, 2404
BsaHI GRCGYC 2 cut(s) 1651, 2052
BsaJI CCNNGG 5 cut(s) 1950, 2082, 2174, 2230, 2231
BsaWI WCCGGW 3 cut(s) 1710, 1732, 2149
BsaXI ACNNNNNCTCC 2 cut(s) 1193, 1223
Bsc4I CCNNNNNNNGG 9 cut(s) 82, 1100, 1646, 1762, 1836, 1869, 2072, 2083, 2384
Bse118I RCCGGY 1 cut(s) 1862
Bse1I ACTGG 2 cut(s) 76, 2389
Bse3DI GCAATG 3 cut(s) 210, 504, 1576
Bse8I GATNNNNATC 2 cut(s) 2094, 2404
BseAI TCCGGA 1 cut(s) 1710
BseBI CCWGG 5 cut(s) 787, 1066, 1790, 1951, 2056
BseDI CCNNGG 5 cut(s) 1950, 2082, 2174, 2230, 2231
BseGI GGATG 3 cut(s) 399, 523, 2256
BseJI GATNNNNATC 2 cut(s) 2094, 2404
BseLI CCNNNNNNNGG 9 cut(s) 82, 1100, 1646, 1762, 1836, 1869, 2072, 2083, 2384
BseMI GCAATG 3 cut(s) 210, 504, 1576
BseMII CTCAG 2 cut(s) 303, 1694
BseNI ACTGG 2 cut(s) 76, 2389
BseRI GAGGAG 2 cut(s) 1214, 1865
BseXI GCAGC 3 cut(s) 148, 2234, 2386
BseYI CCCAGC 1 cut(s) 969
BsgI GTGCAG 1 cut(s) 1231
Bsh1236I CGCG 7 cut(s) 753, 769, 1868, 1881, 1901, 1911, 2084
Bsh1285I CGRYCG 2 cut(s) 414, 2082
BshNI GGYRCC 2 cut(s) 1650, 2058
BsiEI CGRYCG 2 cut(s) 414, 2082
BsiHKAI GWGCWC 4 cut(s) 1994, 2106, 2137, 2351
BsiHKCI CYCGRG 2 cut(s) 2065, 2231
BsiWI CGTACG 1 cut(s) 510
BslFI GGGAC 8 cut(s) 211, 494, 737, 1154, 1473, 1690, 1887, 1912
BslI CCNNNNNNNGG 9 cut(s) 82, 1100, 1646, 1762, 1836, 1869, 2072, 2083, 2384
BsmAI GTCTC 5 cut(s) 196, 250, 906, 1254, 1397
BsmFI GGGAC 8 cut(s) 211, 494, 737, 1154, 1473, 1690, 1887, 1912
BsmI GAATGC 2 cut(s) 745, 1329
BsoBI CYCGRG 2 cut(s) 2065, 2231
Bsp1286I GDGCHC 4 cut(s) 1994, 2106, 2137, 2351
Bsp13I TCCGGA 1 cut(s) 1710
Bsp143I GATC 8 cut(s) 148, 319, 407, 964, 1126, 1713, 2089, 2326
BspCNI CTCAG 2 cut(s) 304, 1693
BspEI TCCGGA 1 cut(s) 1710
BspFNI CGCG 7 cut(s) 753, 769, 1868, 1881, 1901, 1911, 2084
BspLI GGNNCC 9 cut(s) 482, 1506, 1652, 1875, 1927, 1928, 2060, 2091, 2292
BspPI GGATC 7 cut(s) 327, 415, 972, 1134, 1721, 2084, 2097
BspQI GCTCTTC 1 cut(s) 2111
BspT107I GGYRCC 2 cut(s) 1650, 2058
BspTI CTTAAG 1 cut(s) 2417
BsrBI CCGCTC 1 cut(s) 1663
BsrDI GCAATG 3 cut(s) 210, 504, 1576
BsrFI RCCGGY 1 cut(s) 1862
BsrI ACTGG 2 cut(s) 76, 2389
BssAI RCCGGY 1 cut(s) 1862
BssECI CCNNGG 5 cut(s) 1950, 2082, 2174, 2230, 2231
BssMI GATC 8 cut(s) 148, 319, 407, 964, 1126, 1713, 2089, 2326
BssNAI GTATAC 1 cut(s) 1071
BssNI GRCGYC 2 cut(s) 1651, 2052
BssSI CACGAG 1 cut(s) 1303
BssT1I CCWWGG 1 cut(s) 2174
Bst1107I GTATAC 1 cut(s) 1071
Bst2BI CACGAG 1 cut(s) 1303
Bst2UI CCWGG 5 cut(s) 787, 1066, 1790, 1951, 2056
Bst6I CTCTTC 2 cut(s) 22, 2111
BstACI GRCGYC 2 cut(s) 1651, 2052
BstAFI CTTAAG 1 cut(s) 2417
BstAPI GCANNNNNTGC 1 cut(s) 1727
BstBAI YACGTR 2 cut(s) 2138, 2240
BstC8I GCNNGC 6 cut(s) 237, 462, 1206, 1210, 1554, 1864
BstDEI CTNAG 3 cut(s) 123, 312, 1680
BstDSI CCRYGG 1 cut(s) 2082
BstEII GGTNACC 2 cut(s) 868, 1635
BstF5I GGATG 3 cut(s) 399, 523, 2256
BstFNI CGCG 7 cut(s) 753, 769, 1868, 1881, 1901, 1911, 2084
BstH2I RGCGCY 1 cut(s) 1654
BstHHI GCGC 7 cut(s) 753, 1342, 1653, 1868, 1883, 1901, 1911
BstKTI GATC 8 cut(s) 151, 322, 410, 967, 1129, 1716, 2092, 2329
BstMAI GTCTC 5 cut(s) 196, 250, 906, 1254, 1397
BstMBI GATC 8 cut(s) 148, 319, 407, 964, 1126, 1713, 2089, 2326
BstMCI CGRYCG 2 cut(s) 414, 2082
BstNI CCWGG 5 cut(s) 787, 1066, 1790, 1951, 2056
BstNSI RCATGY 5 cut(s) 245, 304, 472, 1556, 2431
BstPI GGTNACC 2 cut(s) 868, 1635
BstSCI CCNGG 9 cut(s) 597, 785, 1064, 1287, 1788, 1949, 2054, 2230, 2231
BstSFI CTRYAG 2 cut(s) 1890, 2010
BstUI CGCG 7 cut(s) 753, 769, 1868, 1881, 1901, 1911, 2084
BstV1I GCAGC 3 cut(s) 148, 2234, 2386
BstX2I RGATCY 2 cut(s) 319, 2089
BstYI RGATCY 2 cut(s) 319, 2089
BstZ17I GTATAC 1 cut(s) 1071
BtgI CCRYGG 1 cut(s) 2082
BtgZI GCGATG 1 cut(s) 1420
BtsCI GGATG 3 cut(s) 399, 523, 2256
BtsI GCAGTG 1 cut(s) 1925
BtsIMutI CAGTG 4 cut(s) 309, 1887, 1925, 2382
Cac8I GCNNGC 6 cut(s) 237, 462, 1206, 1210, 1554, 1864
CaiI CAGNNNCTG 1 cut(s) 780
CfoI GCGC 7 cut(s) 753, 1342, 1653, 1868, 1883, 1901, 1911
Cfr10I RCCGGY 1 cut(s) 1862
Cfr13I GGNCC 9 cut(s) 161, 481, 600, 699, 1504, 1874, 1926, 1935, 2075
Cfr42I CCGCGG 1 cut(s) 2085
Cfr9I CCCGGG 1 cut(s) 2231
CseI GACGC 4 cut(s) 142, 742, 758, 2060
CsiI ACCWGGT 1 cut(s) 1788
Csp6I GTAC 8 cut(s) 436, 511, 537, 875, 1164, 2059, 2112, 2241
CviQI GTAC 8 cut(s) 436, 511, 537, 875, 1164, 2059, 2112, 2241
DdeI CTNAG 3 cut(s) 123, 312, 1680
DinI GGCGCC 1 cut(s) 1652
DpnI GATC 8 cut(s) 150, 321, 409, 966, 1128, 1715, 2091, 2328
DpnII GATC 8 cut(s) 148, 319, 407, 964, 1126, 1713, 2089, 2326
DraI TTTAAA 1 cut(s) 1051
EaeI YGGCCR 5 cut(s) 808, 1764, 1773, 1783, 2386
Eam1104I CTCTTC 2 cut(s) 22, 2111
EarI CTCTTC 2 cut(s) 22, 2111
EciI GGCGGA 2 cut(s) 989, 2102
Eco130I CCWWGG 1 cut(s) 2174
Eco32I GATATC 3 cut(s) 54, 293, 1449
Eco47I GGWCC 4 cut(s) 481, 1504, 1874, 1926
Eco57I CTGAAG 1 cut(s) 186
Eco72I CACGTG 1 cut(s) 2138
Eco88I CYCGRG 2 cut(s) 2065, 2231
Eco91I GGTNACC 2 cut(s) 868, 1635
EcoO109I RGGNCCY 3 cut(s) 699, 1504, 1926
EcoO65I GGTNACC 2 cut(s) 868, 1635
EcoRI GAATTC 2 cut(s) 422, 1624
EcoRII CCWGG 5 cut(s) 785, 1064, 1788, 1949, 2054
EcoRV GATATC 3 cut(s) 54, 293, 1449
EcoT14I CCWWGG 1 cut(s) 2174
EgeI GGCGCC 1 cut(s) 1652
EheI GGCGCC 1 cut(s) 1652
ErhI CCWWGG 1 cut(s) 2174
FaqI GGGAC 8 cut(s) 211, 494, 737, 1154, 1473, 1690, 1887, 1912
FauI CCCGC 8 cut(s) 471, 954, 1131, 1639, 1668, 1937, 1960, 2311
FauNDI CATATG 1 cut(s) 1185
FbaI TGATCA 1 cut(s) 2326
FblI GTMKAC 3 cut(s) 531, 1070, 2013
Fnu4HI GCNGC 7 cut(s) 137, 1860, 1884, 2085, 2220, 2223, 2375
FokI GGATG 3 cut(s) 406, 530, 2243
Fsp4HI GCNGC 7 cut(s) 137, 1860, 1884, 2085, 2220, 2223, 2375
FspAI RTGCGCAY 1 cut(s) 1341
FspBI CTAG 7 cut(s) 252, 891, 1673, 1824, 1995, 2003, 2175
FspI TGCGCA 1 cut(s) 1341
GlaI GCGC 7 cut(s) 752, 1341, 1652, 1867, 1882, 1900, 1910
GluI GCNGC 7 cut(s) 137, 1860, 1884, 2085, 2220, 2223, 2375
GsaI CCCAGC 1 cut(s) 973
GsuI CTGGAG 1 cut(s) 1048
HaeII RGCGCY 1 cut(s) 1654
HgaI GACGC 4 cut(s) 142, 742, 758, 2060
HhaI GCGC 7 cut(s) 753, 1342, 1653, 1868, 1883, 1901, 1911
Hin1I GRCGYC 2 cut(s) 1651, 2052
Hin6I GCGC 7 cut(s) 751, 1340, 1651, 1866, 1881, 1899, 1909
HinP1I GCGC 7 cut(s) 751, 1340, 1651, 1866, 1881, 1899, 1909
HindIII AAGCTT 1 cut(s) 332
HphI GGTGA 4 cut(s) 16, 92, 380, 587
Hpy166II GTNNAC 5 cut(s) 438, 532, 1071, 2014, 2357
Hpy188I TCNGA 7 cut(s) 1004, 1084, 1324, 1596, 1849, 1945, 1989
Hpy8I GTNNAC 5 cut(s) 438, 532, 1071, 2014, 2357
Hpy99I CGWCG 2 cut(s) 584, 1328
HpyAV CCTTC 8 cut(s) 188, 310, 384, 833, 1495, 1519, 1796, 2352
HpyCH4IV ACGT 4 cut(s) 1433, 1532, 2137, 2239
HpyF3I CTNAG 3 cut(s) 123, 312, 1680
HpySE526I ACGT 4 cut(s) 1433, 1532, 2137, 2239
Hsp92I GRCGYC 2 cut(s) 1651, 2052
HspAI GCGC 7 cut(s) 751, 1340, 1651, 1866, 1881, 1899, 1909
KasI GGCGCC 1 cut(s) 1650
KflI GGGWCCC 1 cut(s) 1926
Kpn2I TCCGGA 1 cut(s) 1710
KpnI GGTACC 1 cut(s) 2062
KroI GCCGGC 1 cut(s) 1862
KroNI GCCGGC 1 cut(s) 1864
Ksp22I TGATCA 1 cut(s) 2326
KspI CCGCGG 1 cut(s) 2085
Kzo9I GATC 8 cut(s) 148, 319, 407, 964, 1126, 1713, 2089, 2326
LguI GCTCTTC 1 cut(s) 2111
LmnI GCTCC 3 cut(s) 188, 1201, 1735
Lsp1109I GCAGC 3 cut(s) 148, 2234, 2386
LweI GCATC 4 cut(s) 349, 361, 1806, 1810
MabI ACCWGGT 1 cut(s) 1788
MaeI CTAG 7 cut(s) 252, 891, 1673, 1824, 1995, 2003, 2175
MaeII ACGT 4 cut(s) 1433, 1532, 2137, 2239
MaeIII GTNAC 7 cut(s) 130, 770, 868, 1580, 1635, 2235, 2279
MalI GATC 8 cut(s) 150, 321, 409, 966, 1128, 1715, 2091, 2328
MbiI CCGCTC 1 cut(s) 1663
MboI GATC 8 cut(s) 148, 319, 407, 964, 1126, 1713, 2089, 2326
MboII GAAGA 5 cut(s) 39, 748, 839, 2098, 2171
MfeI CAATTG 2 cut(s) 441, 851
MflI RGATCY 2 cut(s) 319, 2089
MhlI GDGCHC 4 cut(s) 1994, 2106, 2137, 2351
MlsI TGGCCA 2 cut(s) 810, 2388
MluI ACGCGT 1 cut(s) 767
MluNI TGGCCA 2 cut(s) 810, 2388
Mly113I GGCGCC 1 cut(s) 1651
MlyI GAGTC 6 cut(s) 233, 771, 896, 1328, 1405, 1672
MmeI TCCRAC 1 cut(s) 1347
Mox20I TGGCCA 2 cut(s) 810, 2388
MreI CGCCGGCG 1 cut(s) 1862
MroI TCCGGA 1 cut(s) 1710
MroNI GCCGGC 1 cut(s) 1862
MroXI GAANNNNTTC 1 cut(s) 422
MscI TGGCCA 2 cut(s) 810, 2388
MseI TTAA 8 cut(s) 198, 666, 1050, 1121, 1245, 1517, 2046, 2418
MslI CAYNNNNRTG 5 cut(s) 86, 192, 608, 628, 1496
Msp20I TGGCCA 2 cut(s) 810, 2388
MspA1I CMGCKG 2 cut(s) 383, 2084
MspCI CTTAAG 1 cut(s) 2417
MspR9I CCNGG 9 cut(s) 599, 787, 1066, 1289, 1790, 1951, 2056, 2232, 2233
MunI CAATTG 2 cut(s) 441, 851
Mva1269I GAATGC 2 cut(s) 745, 1329
MvaI CCWGG 5 cut(s) 787, 1066, 1790, 1951, 2056
MvnI CGCG 7 cut(s) 753, 769, 1868, 1881, 1901, 1911, 2084
NaeI GCCGGC 1 cut(s) 1864
NarI GGCGCC 1 cut(s) 1651
NciI CCSGG 4 cut(s) 599, 1289, 2232, 2233
NdeI CATATG 1 cut(s) 1185
NdeII GATC 8 cut(s) 148, 319, 407, 964, 1126, 1713, 2089, 2326
NgoMIV GCCGGC 1 cut(s) 1862
NlaIV GGNNCC 9 cut(s) 482, 1506, 1652, 1875, 1927, 1928, 2060, 2091, 2292
NmeAIII GCCGAG 2 cut(s) 1390, 2156
NmuCI GTSAC 4 cut(s) 130, 770, 2235, 2279
NsbI TGCGCA 1 cut(s) 1341
NspI RCATGY 5 cut(s) 245, 304, 472, 1556, 2431
OliI CACNNNNGTG 2 cut(s) 608, 1496
PaeI GCATGC 1 cut(s) 1556
PciI ACATGT 2 cut(s) 241, 468
PciSI GCTCTTC 1 cut(s) 2111
PcsI WCGNNNNNNNCGW 4 cut(s) 187, 1529, 2128, 2134
PctI GAATGC 2 cut(s) 745, 1329
PdiI GCCGGC 1 cut(s) 1864
PdmI GAANNNNTTC 1 cut(s) 422
PfeI GAWTC 6 cut(s) 306, 680, 1114, 1946, 2006, 2189
Pfl23II CGTACG 1 cut(s) 510
PflMI CCANNNNNTGG 2 cut(s) 82, 2384
PkrI GCNGC 7 cut(s) 138, 1861, 1885, 2086, 2221, 2224, 2376
PleI GAGTC 6 cut(s) 232, 771, 895, 1327, 1405, 1672
PluTI GGCGCC 1 cut(s) 1654
PmaCI CACGTG 1 cut(s) 2138
PmlI CACGTG 1 cut(s) 2138
PpsI GAGTC 6 cut(s) 232, 771, 895, 1327, 1405, 1672
Ppu21I YACGTR 2 cut(s) 2138, 2240
PpuMI RGGWCCY 2 cut(s) 1504, 1926
PscI ACATGT 2 cut(s) 241, 468
PsiI TTATAA 1 cut(s) 954
Psp1406I AACGTT 2 cut(s) 1433, 1532
Psp5II RGGWCCY 2 cut(s) 1504, 1926
Psp6I CCWGG 5 cut(s) 785, 1064, 1788, 1949, 2054
PspCI CACGTG 1 cut(s) 2138
PspEI GGTNACC 2 cut(s) 868, 1635
PspFI CCCAGC 1 cut(s) 969
PspGI CCWGG 5 cut(s) 785, 1064, 1788, 1949, 2054
PspLI CGTACG 1 cut(s) 510
PspN4I GGNNCC 9 cut(s) 482, 1506, 1652, 1875, 1927, 1928, 2060, 2091, 2292
PspPI GGNCC 9 cut(s) 161, 481, 600, 699, 1504, 1874, 1926, 1935, 2075
PspPPI RGGWCCY 2 cut(s) 1504, 1926
PstNI CAGNNNCTG 1 cut(s) 780
PsuI RGATCY 2 cut(s) 319, 2089
RsaI GTAC 8 cut(s) 437, 512, 538, 876, 1165, 2060, 2113, 2242
RsaNI GTAC 8 cut(s) 436, 511, 537, 875, 1164, 2059, 2112, 2241
RseI CAYNNNNRTG 5 cut(s) 86, 192, 608, 628, 1496
SacII CCGCGG 1 cut(s) 2085
SapI GCTCTTC 1 cut(s) 2111
SaqAI TTAA 8 cut(s) 198, 666, 1050, 1121, 1245, 1517, 2046, 2418
SatI GCNGC 7 cut(s) 137, 1860, 1884, 2085, 2220, 2223, 2375
Sau3AI GATC 8 cut(s) 148, 319, 407, 964, 1126, 1713, 2089, 2326
Sau96I GGNCC 9 cut(s) 161, 481, 600, 699, 1504, 1874, 1926, 1935, 2075
ScaI AGTACT 1 cut(s) 538
SchI GAGTC 6 cut(s) 233, 771, 896, 1328, 1405, 1672
ScrFI CCNGG 9 cut(s) 599, 787, 1066, 1289, 1790, 1951, 2056, 2232, 2233
SduI GDGCHC 4 cut(s) 1994, 2106, 2137, 2351
SexAI ACCWGGT 1 cut(s) 1788
SfaNI GCATC 4 cut(s) 349, 361, 1806, 1810
SfcI CTRYAG 2 cut(s) 1890, 2010
SfiI GGCCNNNNNGGCC 1 cut(s) 1772
SfoI GGCGCC 1 cut(s) 1652
Sfr303I CCGCGG 1 cut(s) 2085
SgrAI CRCCGGYG 1 cut(s) 1862
SgrBI CCGCGG 1 cut(s) 2085
SinI GGWCC 4 cut(s) 481, 1504, 1874, 1926
SmaI CCCGGG 1 cut(s) 2233
SmiMI CAYNNNNRTG 5 cut(s) 86, 192, 608, 628, 1496
SmlI CTYRAG 2 cut(s) 746, 2417
SmoI CTYRAG 2 cut(s) 746, 2417
SpeI ACTAGT 1 cut(s) 251
SphI GCATGC 1 cut(s) 1556
SspDI GGCGCC 1 cut(s) 1650
SspI AATATT 1 cut(s) 1218
SspMI CTAG 7 cut(s) 252, 891, 1673, 1824, 1995, 2003, 2175
StyD4I CCNGG 9 cut(s) 597, 785, 1064, 1287, 1788, 1949, 2054, 2230, 2231
StyI CCWWGG 1 cut(s) 2174
TaiI ACGT 4 cut(s) 1436, 1535, 2140, 2242
TaqI TCGA 8 cut(s) 58, 256, 410, 1716, 1800, 2122, 2304, 2345
TaqII GACCGA 1 cut(s) 428
TatI WGTACW 2 cut(s) 435, 536
TauI GCSGC 4 cut(s) 1862, 1886, 2087, 2222
TfiI GAWTC 6 cut(s) 306, 680, 1114, 1946, 2006, 2189
Tru1I TTAA 8 cut(s) 198, 666, 1050, 1121, 1245, 1517, 2046, 2418
Tru9I TTAA 8 cut(s) 198, 666, 1050, 1121, 1245, 1517, 2046, 2418
TscAI CASTG 4 cut(s) 316, 1894, 1925, 2389
TseFI GTSAC 4 cut(s) 130, 770, 2235, 2279
TseI GCWGC 3 cut(s) 136, 2222, 2374
Tsp45I GTSAC 4 cut(s) 130, 770, 2235, 2279
TspDTI ATGAA 9 cut(s) 70, 161, 279, 365, 410, 664, 749, 1052, 1373
TspMI CCCGGG 1 cut(s) 2231
TspRI CASTG 4 cut(s) 316, 1894, 1925, 2389
Van91I CCANNNNNTGG 2 cut(s) 82, 2384
Vha464I CTTAAG 1 cut(s) 2417
VpaK11BI GGWCC 4 cut(s) 481, 1504, 1874, 1926
XapI RAATTY 5 cut(s) 266, 422, 1259, 1378, 1624
XbaI TCTAGA 2 cut(s) 890, 2002
XceI RCATGY 5 cut(s) 245, 304, 472, 1556, 2431
XcmI CCANNNNNNNNNTGG 4 cut(s) 79, 284, 1101, 1957
XmaI CCCGGG 1 cut(s) 2231
XmaJI CCTAGG 1 cut(s) 2174
XmiI GTMKAC 3 cut(s) 531, 1070, 2013
XmnI GAANNNNTTC 1 cut(s) 422
XspI CTAG 7 cut(s) 252, 891, 1673, 1824, 1995, 2003, 2175
ZrmI AGTACT 1 cut(s) 538
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.