RLG00000033915

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000074
Physical Location & Seq
Forward (+)
34121505 .. 34125491
3987 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033915

Sequence Viewer

Length: 1326 bp
ATGTCAGGTTTAGATTTGGAGAACACAATTTTCACGATTGGAGAAGTGAGGTTTGAGATGGAGGAGAGTGGTTTGCGATATACTGACCGACAATACTACAATTCTGGCATGGACCCAAACGCTGAAGAAGGATCCAGTACTGACAATTCGGATGAGGAGATTGAATACACAAATTTGATGGAAGAGGCAGAAATGCAAGATTGTACACGATACAGAGGGAAGCTGTATAAGGATTTGAAATTAGAGGATTTGAAGGAAGTTGAGTTTAATAGCATCGAGGAAGTGGACAAGTTCTACTCTTACTATTCTCTAGCGAAGGGGTTCAGTGTAAGGAAGCAGAAGCTCGACAAGAACCGTGCGGGACTAGTCATTAGAAGACAGTTGGTTTGCTCGAAGCAAGGGAAGCGAAGAGCCCCAAAAGATACTATTAGTCATCAGCAAGGGTCGAAGGGGAAGCAGGACAATTGTCAGCTAAGTTCAATTGGGAATTGTCAACAGAACTCGACAAATATCAGTGGGCAGAACCCTCACAAAAAGCAGTGCACTGAAACCCGACGAGCAACAAGAGTTAATTGTCCAGCAAGTTTTGTTGTTAGGTTTTGTACCAAAAGGAGGGTGTACTATGCCTCAGAATTCATAACTGAACACAACCATGCTTTGGGTAGACCTGAGCATCGTCAGTTTCGAAGATCACACCTCAGGGACCGCAACCTTGCTCAGCTTAATGCATCAAGGAAAGTTTTAGTGAGAACATGCCATGCTTACGAGTTCTTGGAGGAGATTGGGAAAAGGTTCACCCATGACATCTTTCTTTTAATCAAGGAGCAGATTAATTTTGAGTCCAAGTTTGTTATTGGGCCGAGAAGTGTTCATCCAAAAACTGAATCGTTGGTGAATAAAAGGTGGACAAAAGAAGCCACTGTTAAGACAGCAATATCGAGTTCCGGTTTGGTTAGTAACATGTCTGTGCAGATTGCACGGTATGGTGAATTGATGGCACAATGTGCTAAAATCTGCCATATTGCTTCCTATAGTGAGGAGGGGTACAATGAGATCAGAGAAGCTCTGAGCCAGCTGACCATACGATCCAAAAAGTACAGCAGTGAGAGCCCTTTCCCAATGTGTGACCACCTTTGTGTGCATCAGACGCCGAGGACAACTAATCTTTTGATTCCAGTGATGGCCATGAAATTGTGCGCAGATTTGCGGATGGGGCAATGCCATGTTTTTTTAACAATTTTTTGTGGCTACTCCAAATTCAGGTGTACGCTGTCATCCATTTTCCAGGGGACAGGAAATAGTTTGGCCACCCCTACATCATGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

442

Amino Acids

50.57

Weight (kDa)

8.96

Isoelectric Point (pI)

54.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 97 - 220 8.8e-12 FAR1 DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1198
AccB7I CCANNNNNTGG 1 cut(s) 658
AccI GTMKAC 1 cut(s) 664
AciI CCGC 3 cut(s) 359, 706, 1207
AclWI GGATC 3 cut(s) 126, 139, 1080
AcoI YGGCCR 2 cut(s) 1182, 1305
AcsI RAATTY 3 cut(s) 172, 632, 1256
AcuI CTGAAG 1 cut(s) 144
AcyI GRCGYC 1 cut(s) 1148
AdeI CACNNNGTG 1 cut(s) 1004
AfaI GTAC 7 cut(s) 139, 205, 604, 620, 1046, 1097, 1267
AfiI CCNNNNNNNGG 3 cut(s) 612, 658, 1260
AflIII ACRYGT 1 cut(s) 960
AgsI TTSAA 4 cut(s) 164, 238, 253, 480
AhlI ACTAGT 1 cut(s) 364
AjnI CCWGG 1 cut(s) 1284
AleI CACNNNNGTG 1 cut(s) 1134
AluBI AGCT 6 cut(s) 223, 343, 472, 721, 1064, 1075
AluI AGCT 6 cut(s) 223, 343, 472, 721, 1064, 1075
Alw21I GWGCWC 1 cut(s) 545
Alw44I GTGCAC 1 cut(s) 541
AlwI GGATC 3 cut(s) 126, 139, 1080
AoxI GGCC 3 cut(s) 857, 1182, 1305
ApaLI GTGCAC 1 cut(s) 541
ApoI RAATTY 3 cut(s) 172, 632, 1256
ArsI GACNNNNNNTTYG 2 cut(s) 369, 401
AseI ATTAAT 1 cut(s) 831
Asp700I GAANNNNTTC 2 cut(s) 320, 791
AspLEI GCGC 1 cut(s) 1199
AspS9I GGNCC 3 cut(s) 112, 703, 857
AsuHPI GGTGA 3 cut(s) 787, 904, 998
AsuII TTCGAA 1 cut(s) 685
AvaII GGWCC 2 cut(s) 112, 703
AxyI CCTNAGG 1 cut(s) 698
BaeGI GKGCMC 1 cut(s) 545
BalI TGGCCA 2 cut(s) 1184, 1307
BamHI GGATCC 1 cut(s) 131
BanII GRGCYC 2 cut(s) 415, 1112
BbsI GAAGAC 1 cut(s) 382
Bbv12I GWGCWC 1 cut(s) 545
BccI CCATC 5 cut(s) 52, 172, 988, 1174, 1204
BciT130I CCWGG 1 cut(s) 1286
BcuI ACTAGT 1 cut(s) 364
BfaI CTAG 2 cut(s) 311, 365
BfmI CTRYAG 1 cut(s) 1030
BlpI GCTNAGC 1 cut(s) 717
BmcAI AGTACT 1 cut(s) 139
Bme1390I CCNGG 1 cut(s) 1286
Bme18I GGWCC 2 cut(s) 112, 703
BmgT120I GGNCC 3 cut(s) 112, 703, 857
BmiI GGNNCC 3 cut(s) 114, 133, 704
BmrFI CCNGG 1 cut(s) 1286
BmsI GCATC 4 cut(s) 282, 682, 737, 1150
BoxI GACNNNNGTC 1 cut(s) 465
BpiI GAAGAC 1 cut(s) 382
Bpu10I CCTNAGC 1 cut(s) 669
Bpu1102I GCTNAGC 1 cut(s) 717
Bpu14I TTCGAA 1 cut(s) 685
BsaHI GRCGYC 1 cut(s) 1148
BsaJI CCNNGG 2 cut(s) 1151, 1285
BsaWI WCCGGW 1 cut(s) 944
Bsc4I CCNNNNNNNGG 3 cut(s) 612, 658, 1260
Bse1I ACTGG 2 cut(s) 135, 1175
Bse21I CCTNAGG 1 cut(s) 698
Bse3DI GCAATG 1 cut(s) 1223
BseBI CCWGG 1 cut(s) 1286
BseDI CCNNGG 2 cut(s) 1151, 1285
BseGI GGATG 4 cut(s) 157, 871, 1215, 1274
BseLI CCNNNNNNNGG 3 cut(s) 612, 658, 1260
BseMI GCAATG 1 cut(s) 1223
BseMII CTCAG 5 cut(s) 642, 660, 712, 731, 1058
BseNI ACTGG 2 cut(s) 135, 1175
BseRI GAGGAG 4 cut(s) 77, 170, 791, 1052
BseSI GKGCMC 1 cut(s) 545
BsgI GTGCAG 1 cut(s) 989
BshFI GGCC 3 cut(s) 859, 1184, 1307
BsiHKAI GWGCWC 1 cut(s) 545
BsiSI CCGG 1 cut(s) 945
BslFI GGGAC 3 cut(s) 375, 716, 1303
BslI CCNNNNNNNGG 3 cut(s) 612, 658, 1260
BsmFI GGGAC 3 cut(s) 375, 716, 1303
BsnI GGCC 3 cut(s) 859, 1184, 1307
Bsp119I TTCGAA 1 cut(s) 685
Bsp1286I GDGCHC 3 cut(s) 415, 545, 1112
Bsp1407I TGTACA 1 cut(s) 203
Bsp143I GATC 4 cut(s) 131, 689, 1053, 1085
Bsp1720I GCTNAGC 1 cut(s) 717
BspACI CCGC 3 cut(s) 359, 706, 1207
BspANI GGCC 3 cut(s) 859, 1184, 1307
BspCNI CTCAG 5 cut(s) 641, 661, 711, 730, 1059
BspLI GGNNCC 3 cut(s) 114, 133, 704
BspPI GGATC 3 cut(s) 126, 139, 1080
BspQI GCTCTTC 1 cut(s) 403
BspT104I TTCGAA 1 cut(s) 685
BsrDI GCAATG 1 cut(s) 1223
BsrGI TGTACA 1 cut(s) 203
BsrI ACTGG 2 cut(s) 135, 1175
BssECI CCNNGG 2 cut(s) 1151, 1285
BssMI GATC 4 cut(s) 131, 689, 1053, 1085
BssNI GRCGYC 1 cut(s) 1148
Bst2UI CCWGG 1 cut(s) 1286
Bst4CI ACNGT 4 cut(s) 356, 381, 922, 981
Bst6I CTCTTC 2 cut(s) 177, 403
BstACI GRCGYC 1 cut(s) 1148
BstAPI GCANNNNNTGC 1 cut(s) 1004
BstAUI TGTACA 1 cut(s) 203
BstBI TTCGAA 1 cut(s) 685
BstC8I GCNNGC 1 cut(s) 1073
BstDEI CTNAG 6 cut(s) 473, 628, 669, 698, 717, 1067
BstF5I GGATG 4 cut(s) 157, 871, 1215, 1274
BstHHI GCGC 1 cut(s) 1199
BstKTI GATC 4 cut(s) 134, 692, 1056, 1088
BstMBI GATC 4 cut(s) 131, 689, 1053, 1085
BstMWI GCNNNNNNNGC 5 cut(s) 403, 1004, 1107, 1147, 1213
BstNI CCWGG 1 cut(s) 1286
BstNSI RCATGY 2 cut(s) 756, 964
BstPAI GACNNNNGTC 1 cut(s) 465
BstSCI CCNGG 1 cut(s) 1284
BstSFI CTRYAG 1 cut(s) 1030
BstSLI GKGCMC 1 cut(s) 545
BstV2I GAAGAC 1 cut(s) 382
BstX2I RGATCY 1 cut(s) 131
BstYI RGATCY 1 cut(s) 131
Bsu36I CCTNAGG 1 cut(s) 698
BsuRI GGCC 3 cut(s) 859, 1184, 1307
BtsCI GGATG 4 cut(s) 157, 871, 1215, 1274
BtsI GCAGTG 2 cut(s) 545, 1108
BtsIMutI CAGTG 7 cut(s) 331, 520, 543, 545, 918, 1108, 1182
Cac8I GCNNGC 1 cut(s) 1073
CfoI GCGC 1 cut(s) 1199
Cfr13I GGNCC 3 cut(s) 112, 703, 857
CseI GACGC 1 cut(s) 1156
Csp6I GTAC 7 cut(s) 138, 204, 603, 619, 1045, 1096, 1266
CviAII CATG 9 cut(s) 109, 653, 753, 758, 800, 961, 1186, 1223, 1320
CviQI GTAC 7 cut(s) 138, 204, 603, 619, 1045, 1096, 1266
DdeI CTNAG 6 cut(s) 473, 628, 669, 698, 717, 1067
DpnI GATC 4 cut(s) 133, 691, 1055, 1087
DpnII GATC 4 cut(s) 131, 689, 1053, 1085
DraIII CACNNNGTG 1 cut(s) 1004
EaeI YGGCCR 2 cut(s) 1182, 1305
Eam1104I CTCTTC 2 cut(s) 177, 403
EarI CTCTTC 2 cut(s) 177, 403
Eco24I GRGCYC 2 cut(s) 415, 1112
Eco47I GGWCC 2 cut(s) 112, 703
Eco57I CTGAAG 1 cut(s) 144
Eco81I CCTNAGG 1 cut(s) 698
EcoRI GAATTC 1 cut(s) 632
EcoRII CCWGG 1 cut(s) 1284
EcoT22I ATGCAT 1 cut(s) 730
EcoT38I GRGCYC 2 cut(s) 415, 1112
FaeI CATG 9 cut(s) 112, 656, 756, 761, 803, 964, 1189, 1226, 1323
FaqI GGGAC 3 cut(s) 375, 716, 1303
FatI CATG 9 cut(s) 108, 652, 752, 757, 799, 960, 1185, 1222, 1319
FauI CCCGC 1 cut(s) 352
FblI GTMKAC 1 cut(s) 664
FokI GGATG 4 cut(s) 164, 858, 1222, 1261
FriOI GRGCYC 2 cut(s) 415, 1112
FspBI CTAG 2 cut(s) 311, 365
FspI TGCGCA 1 cut(s) 1198
GlaI GCGC 1 cut(s) 1198
HaeIII GGCC 3 cut(s) 859, 1184, 1307
HapII CCGG 1 cut(s) 945
HgaI GACGC 1 cut(s) 1156
HhaI GCGC 1 cut(s) 1199
Hin1I GRCGYC 1 cut(s) 1148
Hin1II CATG 9 cut(s) 112, 656, 756, 761, 803, 964, 1189, 1226, 1323
Hin6I GCGC 1 cut(s) 1197
HinP1I GCGC 1 cut(s) 1197
HincII GTYRAC 1 cut(s) 494
HindII GTYRAC 1 cut(s) 494
HinfI GANTC 3 cut(s) 839, 884, 1171
HpaII CCGG 1 cut(s) 945
HphI GGTGA 3 cut(s) 787, 904, 998
Hpy166II GTNNAC 9 cut(s) 206, 286, 494, 543, 619, 665, 795, 906, 1266
Hpy188I TCNGA 5 cut(s) 151, 631, 1058, 1068, 1146
Hpy188III TCNNGA 1 cut(s) 34
Hpy8I GTNNAC 9 cut(s) 206, 286, 494, 543, 619, 665, 795, 906, 1266
Hpy99I CGWCG 1 cut(s) 558
HpyAV CCTTC 4 cut(s) 122, 247, 310, 442
HpyCH4III ACNGT 4 cut(s) 356, 381, 922, 981
HpyCH4V TGCA 6 cut(s) 196, 543, 728, 970, 977, 1141
HpyF10VI GCNNNNNNNGC 5 cut(s) 403, 1004, 1107, 1147, 1213
HpyF3I CTNAG 6 cut(s) 473, 628, 669, 698, 717, 1067
Hsp92I GRCGYC 1 cut(s) 1148
Hsp92II CATG 9 cut(s) 112, 656, 756, 761, 803, 964, 1189, 1226, 1323
HspAI GCGC 1 cut(s) 1197
Kzo9I GATC 4 cut(s) 131, 689, 1053, 1085
LguI GCTCTTC 1 cut(s) 403
LmnI GCTCC 1 cut(s) 823
LweI GCATC 4 cut(s) 282, 682, 737, 1150
MaeI CTAG 2 cut(s) 311, 365
MaeIII GTNAC 2 cut(s) 956, 1124
MalI GATC 4 cut(s) 133, 691, 1055, 1087
MboI GATC 4 cut(s) 131, 689, 1053, 1085
MboII GAAGA 5 cut(s) 137, 194, 387, 420, 699
MfeI CAATTG 2 cut(s) 463, 480
MflI RGATCY 1 cut(s) 131
MhlI GDGCHC 3 cut(s) 415, 545, 1112
MlsI TGGCCA 2 cut(s) 1184, 1307
MluNI TGGCCA 2 cut(s) 1184, 1307
MlyI GAGTC 1 cut(s) 848
Mox20I TGGCCA 2 cut(s) 1184, 1307
Mph1103I ATGCAT 1 cut(s) 730
MroXI GAANNNNTTC 2 cut(s) 320, 791
MscI TGGCCA 2 cut(s) 1184, 1307
MseI TTAA 7 cut(s) 267, 570, 723, 815, 831, 924, 1232
MslI CAYNNNNRTG 3 cut(s) 651, 965, 1134
Msp20I TGGCCA 2 cut(s) 1184, 1307
MspA1I CMGCKG 1 cut(s) 1075
MspI CCGG 1 cut(s) 945
MspR9I CCNGG 1 cut(s) 1286
MunI CAATTG 2 cut(s) 463, 480
MvaI CCWGG 1 cut(s) 1286
MwoI GCNNNNNNNGC 5 cut(s) 403, 1004, 1107, 1147, 1213
NdeII GATC 4 cut(s) 131, 689, 1053, 1085
NlaIII CATG 9 cut(s) 112, 656, 756, 761, 803, 964, 1189, 1226, 1323
NlaIV GGNNCC 3 cut(s) 114, 133, 704
NmeAIII GCCGAG 2 cut(s) 885, 1176
NmuCI GTSAC 1 cut(s) 1124
NsbI TGCGCA 1 cut(s) 1198
NsiI ATGCAT 1 cut(s) 730
NspI RCATGY 2 cut(s) 756, 964
NspV TTCGAA 1 cut(s) 685
OliI CACNNNNGTG 1 cut(s) 1134
PciI ACATGT 1 cut(s) 960
PciSI GCTCTTC 1 cut(s) 403
PcsI WCGNNNNNNNCGW 1 cut(s) 682
PdmI GAANNNNTTC 2 cut(s) 320, 791
PfeI GAWTC 2 cut(s) 884, 1171
PflMI CCANNNNNTGG 1 cut(s) 658
PleI GAGTC 1 cut(s) 847
PpsI GAGTC 1 cut(s) 847
PscI ACATGT 1 cut(s) 960
PshAI GACNNNNGTC 1 cut(s) 465
PshBI ATTAAT 1 cut(s) 831
Psp6I CCWGG 1 cut(s) 1284
PspGI CCWGG 1 cut(s) 1284
PspN4I GGNNCC 3 cut(s) 114, 133, 704
PspPI GGNCC 3 cut(s) 112, 703, 857
PsuI RGATCY 1 cut(s) 131
PvuII CAGCTG 1 cut(s) 1075
RsaI GTAC 7 cut(s) 139, 205, 604, 620, 1046, 1097, 1267
RsaNI GTAC 7 cut(s) 138, 204, 603, 619, 1045, 1096, 1266
RseI CAYNNNNRTG 3 cut(s) 651, 965, 1134
SapI GCTCTTC 1 cut(s) 403
SaqAI TTAA 7 cut(s) 267, 570, 723, 815, 831, 924, 1232
Sau3AI GATC 4 cut(s) 131, 689, 1053, 1085
Sau96I GGNCC 3 cut(s) 112, 703, 857
ScaI AGTACT 1 cut(s) 139
SchI GAGTC 1 cut(s) 848
ScrFI CCNGG 1 cut(s) 1286
SduI GDGCHC 3 cut(s) 415, 545, 1112
SfaNI GCATC 4 cut(s) 282, 682, 737, 1150
SfcI CTRYAG 1 cut(s) 1030
SfuI TTCGAA 1 cut(s) 685
SinI GGWCC 2 cut(s) 112, 703
SmiMI CAYNNNNRTG 3 cut(s) 651, 965, 1134
SpeI ACTAGT 1 cut(s) 364
SsiI CCGC 3 cut(s) 359, 706, 1207
SspMI CTAG 2 cut(s) 311, 365
StyD4I CCNGG 1 cut(s) 1284
TaaI ACNGT 4 cut(s) 356, 381, 922, 981
TaqI TCGA 7 cut(s) 276, 345, 392, 446, 503, 685, 938
TaqII GACCGA 1 cut(s) 102
TatI WGTACW 4 cut(s) 137, 203, 618, 1095
TfiI GAWTC 2 cut(s) 884, 1171
Tru1I TTAA 7 cut(s) 267, 570, 723, 815, 831, 924, 1232
Tru9I TTAA 7 cut(s) 267, 570, 723, 815, 831, 924, 1232
TscAI CASTG 7 cut(s) 331, 520, 545, 550, 925, 1108, 1182
TseFI GTSAC 1 cut(s) 1124
Tsp45I GTSAC 1 cut(s) 1124
TspDTI ATGAA 3 cut(s) 625, 860, 1202
TspRI CASTG 7 cut(s) 331, 520, 545, 550, 925, 1108, 1182
Van91I CCANNNNNTGG 1 cut(s) 658
VneI GTGCAC 1 cut(s) 541
VpaK11BI GGWCC 2 cut(s) 112, 703
VspI ATTAAT 1 cut(s) 831
XapI RAATTY 3 cut(s) 172, 632, 1256
XceI RCATGY 2 cut(s) 756, 964
XmiI GTMKAC 1 cut(s) 664
XmnI GAANNNNTTC 2 cut(s) 320, 791
XspI CTAG 2 cut(s) 311, 365
ZrmI AGTACT 1 cut(s) 139
Zsp2I ATGCAT 1 cut(s) 730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.