Rh3DG304600

Protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0000074
Physical Location & Seq
Forward (+)
32330555 .. 32333347
2793 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG304600.1

Sequence Viewer

Length: 1569 bp
ATGGACACAGACGAAGGGGGCCTTCTGTACAGTGACCATATTTATCATGAGTGTTTATCATCAGACGATGAATCAGAAGATGAAATTTCGATTCGGTTTGGTAAATGCACTAAGGTAACAGCGCGTACAAAGGAGGCAAATGACAGTATAATACCTGGTGAATCGGGTGAATTGAGGAAATCACCAGGCGTAGTTGAAGAGGAGGAAACATTACCTGAGTGCGCTGTTGAAAGAACAGAATATGTGAACCACACGGGGTCCGCACAGCTGAATGGGAAGCACTTCGAAGACCTCACAATGGATGATATGATGGGGGTATACTTCCCAACTGTAGAAGAGGCAGAAAAGTTCTACTTGCTGTACTCACGAATACTTGGTTTCAGCGTAAGGAGGGACAGATTGCAGAAGGAAGGCAATGGTTTGGTGGTAAGGAGGCAGTGGGTCTGTTCAAAACAAGGATTGGCAAGTATCAAGTGCAGGAAGCAAAAAGGTGTGGATAAGAACAAAACTGCAAAGAATGAGAAGATTGGGGAGCAGAAAAAATCGAGGAGGAACATAATACCGAGGGGAGTAAGATACACAAGAGTTAACTGCCCGGTTTCATTTAGTGTTCGATATTGCAAAGATAAGGAGCTATACCGCGTGACTAAGTTTGTGCAGGAGCACAATGATGACCTTGCAAAGTCCCATGAAGTTCAGTTCTTGCGGTCAAACTGTCGCGTGGAAGACAAAGATGTTGCTCAGGTGGAGTGCCTGCGCCGCGCACAAGTCCACTCTAGTAGGGCGTATGAGCAACTGGTAGAGCAAGCCGGGGGACACGACGGTGTTGGCTTCTTGATGAAGGATCTGTACAACAAGATTTATGAGTTGAGGAAAAATGCTGAGATGGATGGAGATGCTCAGGCTGCCATCACTTGGATGAACATGAGGGGAATGGAGTCAGAAGAGTTCTGCTGCAGGGTAGGAATGATTGAATTTGCAAGGCTAGTTCAAAGCTCAAGTGAGTTCAAGATAGATCCACCCATGGACACATCAAGAGTGCCTCCGAGCAGAAACGTTGTGAGGGACCCGAAAATATCCCGCACAAAGGGCATGCCCTCTAATCCCACAACAAACACTGAAAATGCCAACAAAGAGCAGCGGCTTTGCGGTAAATGTTTTATGCCTGGTCATAGCAGGAGCACCTGTACAGCCGGTGAAGAAGGGGTTCTAAATCGTGGATATGCAGATTCCCATCATACGGTACCTTGTGTTGAAGTTTACTCAGGTTCGGTACCTGATGTTGCACCTTTAGTCCCAAATATGGCACACCTATCATCCTATGTGGCAGCCGCAGTCCCTGATCCCCCTGCCTCAGTTCATCTTCCCGCAGACTTACCATATCATCCCACACCTTGTGTAACTGAGTATGGTATGGAGCTTGATTTTGATGACAAGGGCGCTAGCAGAGTTGGTGGTATTGGTCAATTCCCATTCTTCGTTGCATCCCAGCATTCCTCATCCTTCGGTATTCTGCCTTTTTCATTCAACCTGAACCAGACCGACCAAATGATGATGTTACGCAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

522

Amino Acids

58.67

Weight (kDa)

6.06

Isoelectric Point (pI)

49.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 116 - 227 2e-11 FAR1 DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 1243, 1273
AccB1I GGYRCC 2 cut(s) 1243, 1273
AccB7I CCANNNNNTGG 1 cut(s) 915
AccI GTMKAC 1 cut(s) 318
AccII CGCG 4 cut(s) 124, 642, 720, 762
AciI CCGC 9 cut(s) 261, 640, 706, 760, 1081, 1141, 1149, 1332, 1368
AclI AACGTT 1 cut(s) 1056
AclWI GGATC 3 cut(s) 852, 1010, 1337
AcsI RAATTY 2 cut(s) 84, 974
AdeI CACNNNGTG 1 cut(s) 1397
AfaI GTAC 7 cut(s) 29, 127, 362, 851, 1189, 1245, 1275
AfiI CCNNNNNNNGG 5 cut(s) 298, 915, 1087, 1240, 1303
AgsI TTSAA 8 cut(s) 197, 230, 450, 974, 992, 1009, 1256, 1528
AjnI CCWGG 3 cut(s) 154, 184, 1165
AleI CACNNNNGTG 1 cut(s) 822
AluBI AGCT 5 cut(s) 268, 634, 996, 1420, 1566
AluI AGCT 5 cut(s) 268, 634, 996, 1420, 1566
Alw21I GWGCWC 2 cut(s) 666, 1184
AlwI GGATC 3 cut(s) 852, 1010, 1337
AlwNI CAGNNNCTG 1 cut(s) 1340
AoxI GGCC 1 cut(s) 19
ApeKI GCWGC 5 cut(s) 905, 954, 1138, 1328, 1563
ApoI RAATTY 2 cut(s) 84, 974
Asp700I GAANNNNTTC 2 cut(s) 281, 1206
Asp718I GGTACC 2 cut(s) 1243, 1273
AspLEI GCGC 5 cut(s) 124, 224, 759, 764, 1442
AspS9I GGNCC 3 cut(s) 19, 258, 1066
AsuC2I CCSGG 2 cut(s) 596, 811
AsuHPI GGTGA 4 cut(s) 170, 174, 179, 1208
AsuII TTCGAA 1 cut(s) 285
AsuNHI GCTAGC 1 cut(s) 1442
AvaII GGWCC 2 cut(s) 258, 1066
BanI GGYRCC 2 cut(s) 1243, 1273
BarI GAAGNNNNNNTAC 2 cut(s) 833, 865
BbsI GAAGAC 2 cut(s) 294, 732
Bbv12I GWGCWC 2 cut(s) 666, 1184
BbvI GCAGC 4 cut(s) 892, 941, 1150, 1340
BccI CCATC 5 cut(s) 304, 880, 884, 917, 1242
BciT130I CCWGG 3 cut(s) 156, 186, 1167
BcnI CCSGG 2 cut(s) 596, 811
BfaI CTAG 3 cut(s) 777, 986, 1443
BfmI CTRYAG 2 cut(s) 330, 955
BfoI RGCGCY 1 cut(s) 1443
BisI GCNGC 8 cut(s) 760, 906, 955, 1139, 1142, 1329, 1332, 1564
BlsI GCNGC 8 cut(s) 761, 907, 956, 1140, 1143, 1330, 1333, 1565
Bme1390I CCNGG 5 cut(s) 156, 186, 596, 811, 1167
Bme18I GGWCC 2 cut(s) 258, 1066
BmgT120I GGNCC 3 cut(s) 19, 258, 1066
BmiI GGNNCC 6 cut(s) 20, 259, 1067, 1068, 1245, 1275
BmrFI CCNGG 5 cut(s) 156, 186, 596, 811, 1167
BmsI GCATC 2 cut(s) 886, 1493
BmtI GCTAGC 1 cut(s) 1446
BpiI GAAGAC 2 cut(s) 294, 732
Bpu10I CCTNAGC 2 cut(s) 741, 900
Bpu14I TTCGAA 1 cut(s) 285
BpuEI CTTGAG 1 cut(s) 982
BpuMI CCSGG 2 cut(s) 596, 811
BsaBI GATNNNNATC 1 cut(s) 1233
BsaJI CCNNGG 3 cut(s) 563, 810, 1023
BsaXI ACNNNNNCTCC 2 cut(s) 1171, 1201
Bsc4I CCNNNNNNNGG 5 cut(s) 298, 915, 1087, 1240, 1303
Bse118I RCCGGY 1 cut(s) 1193
Bse1I ACTGG 1 cut(s) 801
Bse3DI GCAATG 1 cut(s) 421
Bse8I GATNNNNATC 1 cut(s) 1233
BseBI CCWGG 3 cut(s) 156, 186, 1167
BseDI CCNNGG 3 cut(s) 563, 810, 1023
BseGI GGATG 7 cut(s) 307, 895, 924, 1316, 1384, 1484, 1499
BseJI GATNNNNATC 1 cut(s) 1233
BseLI CCNNNNNNNGG 5 cut(s) 298, 915, 1087, 1240, 1303
BseMI GCAATG 1 cut(s) 421
BseMII CTCAG 7 cut(s) 207, 755, 873, 914, 1278, 1368, 1395
BseNI ACTGG 1 cut(s) 801
BseRI GAGGAG 2 cut(s) 215, 562
BseXI GCAGC 4 cut(s) 892, 941, 1150, 1340
BseYI CCCAGC 1 cut(s) 1488
BsgI GTGCAG 2 cut(s) 496, 677
Bsh1236I CGCG 4 cut(s) 124, 642, 720, 762
BshFI GGCC 1 cut(s) 21
BshNI GGYRCC 2 cut(s) 1243, 1273
BsiHKAI GWGCWC 2 cut(s) 666, 1184
BsiSI CCGG 3 cut(s) 596, 810, 1194
BslFI GGGAC 6 cut(s) 407, 670, 828, 1079, 1280, 1322
BslI CCNNNNNNNGG 5 cut(s) 298, 915, 1087, 1240, 1303
BsmFI GGGAC 6 cut(s) 407, 670, 828, 1079, 1280, 1322
BsmI GAATGC 1 cut(s) 1492
BsnI GGCC 1 cut(s) 21
Bsp119I TTCGAA 1 cut(s) 285
Bsp1286I GDGCHC 2 cut(s) 666, 1184
Bsp1407I TGTACA 3 cut(s) 27, 849, 1187
Bsp143I GATC 3 cut(s) 844, 1015, 1342
Bsp19I CCATGG 1 cut(s) 1023
BspACI CCGC 9 cut(s) 261, 640, 706, 760, 1081, 1141, 1149, 1332, 1368
BspANI GGCC 1 cut(s) 21
BspCNI CTCAG 7 cut(s) 208, 754, 874, 913, 1277, 1367, 1396
BspFNI CGCG 4 cut(s) 124, 642, 720, 762
BspHI TCATGA 1 cut(s) 46
BspLI GGNNCC 6 cut(s) 20, 259, 1067, 1068, 1245, 1275
BspMAI CTGCAG 1 cut(s) 959
BspOI GCTAGC 1 cut(s) 1446
BspPI GGATC 3 cut(s) 852, 1010, 1337
BspT104I TTCGAA 1 cut(s) 285
BspT107I GGYRCC 2 cut(s) 1243, 1273
BsrDI GCAATG 1 cut(s) 421
BsrFI RCCGGY 1 cut(s) 1193
BsrGI TGTACA 3 cut(s) 27, 849, 1187
BsrI ACTGG 1 cut(s) 801
BssAI RCCGGY 1 cut(s) 1193
BssECI CCNNGG 3 cut(s) 563, 810, 1023
BssMI GATC 3 cut(s) 844, 1015, 1342
BssNAI GTATAC 1 cut(s) 319
BssT1I CCWWGG 1 cut(s) 1023
Bst1107I GTATAC 1 cut(s) 319
Bst2UI CCWGG 3 cut(s) 156, 186, 1167
Bst4CI ACNGT 6 cut(s) 32, 146, 331, 716, 824, 1243
Bst6I CTCTTC 3 cut(s) 192, 330, 939
BstAUI TGTACA 3 cut(s) 27, 849, 1187
BstBI TTCGAA 1 cut(s) 285
BstC8I GCNNGC 4 cut(s) 755, 807, 1094, 1444
BstDEI CTNAG 9 cut(s) 111, 216, 648, 741, 882, 900, 1264, 1354, 1404
BstDSI CCRYGG 1 cut(s) 1023
BstF5I GGATG 7 cut(s) 307, 895, 924, 1316, 1384, 1484, 1499
BstFNI CGCG 4 cut(s) 124, 642, 720, 762
BstH2I RGCGCY 1 cut(s) 1443
BstHHI GCGC 5 cut(s) 124, 224, 759, 764, 1442
BstKTI GATC 3 cut(s) 847, 1018, 1345
BstMBI GATC 3 cut(s) 844, 1015, 1342
BstMWI GCNNNNNNNGC 3 cut(s) 759, 905, 1089
BstNI CCWGG 3 cut(s) 156, 186, 1167
BstNSI RCATGY 1 cut(s) 1096
BstSCI CCNGG 5 cut(s) 154, 184, 594, 809, 1165
BstSFI CTRYAG 2 cut(s) 330, 955
BstUI CGCG 4 cut(s) 124, 642, 720, 762
BstV1I GCAGC 4 cut(s) 892, 941, 1150, 1340
BstV2I GAAGAC 2 cut(s) 294, 732
BstX2I RGATCY 2 cut(s) 844, 1015
BstYI RGATCY 2 cut(s) 844, 1015
BstZ17I GTATAC 1 cut(s) 319
BsuRI GGCC 1 cut(s) 21
BtgI CCRYGG 1 cut(s) 1023
BtsCI GGATG 7 cut(s) 307, 895, 924, 1316, 1384, 1484, 1499
BtsI GCAGTG 1 cut(s) 443
BtsIMutI CAGTG 3 cut(s) 37, 443, 1116
Cac8I GCNNGC 4 cut(s) 755, 807, 1094, 1444
CaiI CAGNNNCTG 1 cut(s) 1340
CciI TCATGA 1 cut(s) 46
CfoI GCGC 5 cut(s) 124, 224, 759, 764, 1442
Cfr10I RCCGGY 1 cut(s) 1193
Cfr13I GGNCC 3 cut(s) 19, 258, 1066
CsiI ACCWGGT 1 cut(s) 154
Csp6I GTAC 7 cut(s) 28, 126, 361, 850, 1188, 1244, 1274
CviAII CATG 5 cut(s) 47, 689, 925, 1024, 1093
CviQI GTAC 7 cut(s) 28, 126, 361, 850, 1188, 1244, 1274
DdeI CTNAG 9 cut(s) 111, 216, 648, 741, 882, 900, 1264, 1354, 1404
DpnI GATC 3 cut(s) 846, 1017, 1344
DpnII GATC 3 cut(s) 844, 1015, 1342
DraIII CACNNNGTG 1 cut(s) 1397
Eam1104I CTCTTC 3 cut(s) 192, 330, 939
EarI CTCTTC 3 cut(s) 192, 330, 939
Eco130I CCWWGG 1 cut(s) 1023
Eco47I GGWCC 2 cut(s) 258, 1066
EcoO109I RGGNCCY 2 cut(s) 19, 1066
EcoRII CCWGG 3 cut(s) 154, 184, 1165
EcoT14I CCWWGG 1 cut(s) 1023
ErhI CCWWGG 1 cut(s) 1023
FaeI CATG 5 cut(s) 50, 692, 928, 1027, 1096
FalI AAGNNNNNCTT 3 cut(s) 38, 338, 370
FaqI GGGAC 6 cut(s) 407, 670, 828, 1079, 1280, 1322
FatI CATG 5 cut(s) 46, 688, 924, 1023, 1092
FauI CCCGC 2 cut(s) 1088, 1375
FblI GTMKAC 1 cut(s) 318
Fnu4HI GCNGC 8 cut(s) 760, 906, 955, 1139, 1142, 1329, 1332, 1564
FokI GGATG 7 cut(s) 314, 902, 931, 1303, 1371, 1471, 1486
Fsp4HI GCNGC 8 cut(s) 760, 906, 955, 1139, 1142, 1329, 1332, 1564
FspBI CTAG 3 cut(s) 777, 986, 1443
GlaI GCGC 5 cut(s) 123, 223, 758, 763, 1441
GluI GCNGC 8 cut(s) 760, 906, 955, 1139, 1142, 1329, 1332, 1564
GsaI CCCAGC 1 cut(s) 1492
HaeII RGCGCY 1 cut(s) 1443
HaeIII GGCC 1 cut(s) 21
HapII CCGG 3 cut(s) 596, 810, 1194
HhaI GCGC 5 cut(s) 124, 224, 759, 764, 1442
Hin1II CATG 5 cut(s) 50, 692, 928, 1027, 1096
Hin6I GCGC 5 cut(s) 122, 222, 757, 762, 1440
HinP1I GCGC 5 cut(s) 122, 222, 757, 762, 1440
HincII GTYRAC 1 cut(s) 589
HindII GTYRAC 1 cut(s) 589
HinfI GANTC 5 cut(s) 71, 91, 161, 938, 1229
HpaI GTTAAC 1 cut(s) 589
HpaII CCGG 3 cut(s) 596, 810, 1194
HphI GGTGA 4 cut(s) 170, 174, 179, 1208
Hpy166II GTNNAC 5 cut(s) 247, 319, 589, 772, 1261
Hpy188I TCNGA 4 cut(s) 64, 76, 943, 1047
Hpy188III TCNNGA 5 cut(s) 47, 366, 835, 1009, 1035
Hpy8I GTNNAC 5 cut(s) 247, 319, 589, 772, 1261
Hpy99I CGWCG 1 cut(s) 824
HpyAV CCTTC 7 cut(s) 8, 32, 400, 404, 835, 1196, 1513
HpyCH4III ACNGT 6 cut(s) 32, 146, 331, 716, 824, 1243
HpyCH4IV ACGT 1 cut(s) 1056
HpyF10VI GCNNNNNNNGC 3 cut(s) 759, 905, 1089
HpyF3I CTNAG 9 cut(s) 111, 216, 648, 741, 882, 900, 1264, 1354, 1404
HpySE526I ACGT 1 cut(s) 1056
Hsp92II CATG 5 cut(s) 50, 692, 928, 1027, 1096
HspAI GCGC 5 cut(s) 122, 222, 757, 762, 1440
KflI GGGWCCC 1 cut(s) 1066
KpnI GGTACC 2 cut(s) 1247, 1277
KspAI GTTAAC 1 cut(s) 589
Kzo9I GATC 3 cut(s) 844, 1015, 1342
LmnI GCTCC 5 cut(s) 532, 631, 661, 1179, 1417
Lsp1109I GCAGC 4 cut(s) 892, 941, 1150, 1340
LweI GCATC 2 cut(s) 886, 1493
MabI ACCWGGT 1 cut(s) 154
MaeI CTAG 3 cut(s) 777, 986, 1443
MaeII ACGT 1 cut(s) 1056
MaeIII GTNAC 5 cut(s) 32, 115, 643, 1399, 1557
MalI GATC 3 cut(s) 846, 1017, 1344
MboI GATC 3 cut(s) 844, 1015, 1342
MflI RGATCY 2 cut(s) 844, 1015
MhlI GDGCHC 2 cut(s) 666, 1184
MluCI AATT 4 cut(s) 84, 170, 974, 1466
MlyI GAGTC 1 cut(s) 947
MroXI GAANNNNTTC 2 cut(s) 281, 1206
MseI TTAA 1 cut(s) 588
MslI CAYNNNNRTG 3 cut(s) 669, 822, 917
MspA1I CMGCKG 3 cut(s) 268, 1141, 1566
MspI CCGG 3 cut(s) 596, 810, 1194
MspR9I CCNGG 5 cut(s) 156, 186, 596, 811, 1167
MteI GCGCNGCGC 1 cut(s) 760
Mva1269I GAATGC 1 cut(s) 1492
MvaI CCWGG 3 cut(s) 156, 186, 1167
MvnI CGCG 4 cut(s) 124, 642, 720, 762
MwoI GCNNNNNNNGC 3 cut(s) 759, 905, 1089
NciI CCSGG 2 cut(s) 596, 811
NcoI CCATGG 1 cut(s) 1023
NdeII GATC 3 cut(s) 844, 1015, 1342
NheI GCTAGC 1 cut(s) 1442
NlaIII CATG 5 cut(s) 50, 692, 928, 1027, 1096
NlaIV GGNNCC 6 cut(s) 20, 259, 1067, 1068, 1245, 1275
NmuCI GTSAC 2 cut(s) 32, 643
NspI RCATGY 1 cut(s) 1096
NspV TTCGAA 1 cut(s) 285
OliI CACNNNNGTG 1 cut(s) 822
PaeI GCATGC 1 cut(s) 1096
PagI TCATGA 1 cut(s) 46
PctI GAATGC 1 cut(s) 1492
PdmI GAANNNNTTC 2 cut(s) 281, 1206
PfeI GAWTC 4 cut(s) 71, 91, 161, 1229
PflMI CCANNNNNTGG 1 cut(s) 915
PkrI GCNGC 8 cut(s) 761, 907, 956, 1140, 1143, 1330, 1333, 1565
PleI GAGTC 1 cut(s) 946
PpsI GAGTC 1 cut(s) 946
PpuMI RGGWCCY 1 cut(s) 1066
Psp1406I AACGTT 1 cut(s) 1056
Psp5II RGGWCCY 1 cut(s) 1066
Psp6I CCWGG 3 cut(s) 154, 184, 1165
PspFI CCCAGC 1 cut(s) 1488
PspGI CCWGG 3 cut(s) 154, 184, 1165
PspN4I GGNNCC 6 cut(s) 20, 259, 1067, 1068, 1245, 1275
PspPI GGNCC 3 cut(s) 19, 258, 1066
PspPPI RGGWCCY 1 cut(s) 1066
PstI CTGCAG 1 cut(s) 959
PstNI CAGNNNCTG 1 cut(s) 1340
PsuI RGATCY 2 cut(s) 844, 1015
PvuII CAGCTG 2 cut(s) 268, 1566
RsaI GTAC 7 cut(s) 29, 127, 362, 851, 1189, 1245, 1275
RsaNI GTAC 7 cut(s) 28, 126, 361, 850, 1188, 1244, 1274
RseI CAYNNNNRTG 3 cut(s) 669, 822, 917
SaqAI TTAA 1 cut(s) 588
SatI GCNGC 8 cut(s) 760, 906, 955, 1139, 1142, 1329, 1332, 1564
Sau3AI GATC 3 cut(s) 844, 1015, 1342
Sau96I GGNCC 3 cut(s) 19, 258, 1066
SchI GAGTC 1 cut(s) 947
ScrFI CCNGG 5 cut(s) 156, 186, 596, 811, 1167
SduI GDGCHC 2 cut(s) 666, 1184
SexAI ACCWGGT 1 cut(s) 154
SfaNI GCATC 2 cut(s) 886, 1493
SfcI CTRYAG 2 cut(s) 330, 955
SfuI TTCGAA 1 cut(s) 285
SinI GGWCC 2 cut(s) 258, 1066
SmiMI CAYNNNNRTG 3 cut(s) 669, 822, 917
SmlI CTYRAG 1 cut(s) 997
SmoI CTYRAG 1 cut(s) 997
SphI GCATGC 1 cut(s) 1096
Sse9I AATT 4 cut(s) 84, 170, 974, 1466
SsiI CCGC 9 cut(s) 261, 640, 706, 760, 1081, 1141, 1149, 1332, 1368
SspMI CTAG 3 cut(s) 777, 986, 1443
StyD4I CCNGG 5 cut(s) 154, 184, 594, 809, 1165
StyI CCWWGG 1 cut(s) 1023
TaaI ACNGT 6 cut(s) 32, 146, 331, 716, 824, 1243
TaiI ACGT 1 cut(s) 1059
TaqI TCGA 4 cut(s) 89, 285, 545, 613
TaqII GACCGA 1 cut(s) 1556
TasI AATT 4 cut(s) 84, 170, 974, 1466
TatI WGTACW 4 cut(s) 27, 360, 849, 1187
TauI GCSGC 3 cut(s) 762, 1144, 1334
TfiI GAWTC 4 cut(s) 71, 91, 161, 1229
Tru1I TTAA 1 cut(s) 588
Tru9I TTAA 1 cut(s) 588
TscAI CASTG 3 cut(s) 37, 443, 1123
TseFI GTSAC 2 cut(s) 32, 643
TseI GCWGC 5 cut(s) 905, 954, 1138, 1328, 1563
Tsp45I GTSAC 2 cut(s) 32, 643
TspDTI ATGAA 8 cut(s) 84, 96, 591, 705, 854, 935, 1349, 1512
TspRI CASTG 3 cut(s) 37, 443, 1123
Van91I CCANNNNNTGG 1 cut(s) 915
VpaK11BI GGWCC 2 cut(s) 258, 1066
XapI RAATTY 2 cut(s) 84, 974
XceI RCATGY 1 cut(s) 1096
XmiI GTMKAC 1 cut(s) 318
XmnI GAANNNNTTC 2 cut(s) 281, 1206
XspI CTAG 3 cut(s) 777, 986, 1443
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.