Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0000074

Physical Location & Seq

Genomic Coordinates Forward (+)

10145357 .. 10158934

Gene Structure 13578 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00226560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 804 bp

ATGGAAGAGATAACAACACGTGATGAACGCAGCCATATCCGTTCAAATGGCCAAAGAGTGTTGCCCGGCGGTGGAGTCGGTGAAGATGGACCTCCAACAACTCGAGTGTTAGCAAATGATCAGTTGCTCACCATTTGGATCAGAATGGCATCCGTCGCCGAGCCGCGTCATGTGATGACAAGTCTTGAGGAGAAGCTCATTGATGAGGAAGTGGATGAGATGATTTGCGAGACTGATGTTGATGGTGATCATTCGGAAATGGATAAAGTATACATAATCGGGTTATACGGGTTTACTTCATGTTGGCGGGTTGACCCGTGGCTGACCCATTTATTAAATGGGTCATGGCGGGTTGACCCGTGGTTGACCCGCTTTTTAATCGTGCGGGTTCAACCCGCTTTATTTCGTGCGGGTTTCGAGTCGTGTTATCGGGTCGTATCGGAATTGACAGCCGTAGAGGAGACACAAATAACCAACTCAGGTATGCAACCCGTAAAGTGCTTCTCTCTGCTCTCTTCCCGAACTCGAATCAAACTCGGCCTTGGATCTCTCTTTTACTTCAACGCCACATGGAGATGGCATTCCAGGTTTGAGTACGTGAATGAAGATGGTGCTAGAAACCTTTGGACAGTGCTTCGTGAACATTTTGACAACATTCACAATCTTCCGAACATAGAAACACGATGGAATAATCTCCGCTTCTCTAACTTTGACGAGAGTTATGTAATATCGTTCGAAATCTCTCCACATCGGATCATTGATGCATGCCTGTGGAAGAACTATCACATAAGAACAATTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006605 GO:0006810 GO:0006886 GO:0006996 GO:0007275 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009653 GO:0009657 GO:0009658 GO:0009662 GO:0009707 GO:0009719 GO:0009725 GO:0009735 GO:0009790 GO:0009941 GO:0009987 GO:0010006 GO:0010033 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0016043 GO:0017038 GO:0019867 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031350 GO:0031351 GO:0031354 GO:0031355 GO:0031358 GO:0031359 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0042170 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0048598 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0061927 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072596 GO:0072598 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bac_surface_Ag

Protein Analysis

267

Amino Acids

31.17

Weight (kDa)

5.41

Isoelectric Point (pI)

52.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000074)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica	Prupe.2G034100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata	RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora	Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii	Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa	Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha	Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana	Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	270
AccII	CGCG	1 cut(s)	166
AciI	CCGC	9 cut(s)	69, 164, 307, 349, 370, 385, 396, 410, 697
AclWI	GGATC	3 cut(s)	146, 553, 761
AcoI	YGGCCR	1 cut(s)	49
AcvI	CACGTG	1 cut(s)	20
AfaI	GTAC	1 cut(s)	596
AfiI	CCNNNNNNNGG	1 cut(s)	71
AflIII	ACRYGT	1 cut(s)	17
AgsI	TTSAA	3 cut(s)	45, 392, 562
AjnI	CCWGG	1 cut(s)	584
AluBI	AGCT	1 cut(s)	196
AluI	AGCT	1 cut(s)	196
Alw26I	GTCTC	2 cut(s)	224, 455
AlwI	GGATC	3 cut(s)	146, 553, 761
Ama87I	CYCGRG	1 cut(s)	102
AoxI	GGCC	2 cut(s)	49, 538
ApeKI	GCWGC	1 cut(s)	30
AspS9I	GGNCC	1 cut(s)	89
AsuC2I	CCSGG	1 cut(s)	66
AsuHPI	GGTGA	3 cut(s)	92, 121, 257
AsuII	TTCGAA	1 cut(s)	735
AvaI	CYCGRG	1 cut(s)	102
AvaII	GGWCC	1 cut(s)	89
BalI	TGGCCA	1 cut(s)	51
BbrPI	CACGTG	1 cut(s)	20
BbvI	GCAGC	1 cut(s)	42
BccI	CCATC	5 cut(s)	80, 236, 570, 602, 678
BceAI	ACGGC	1 cut(s)	437
BciT130I	CCWGG	1 cut(s)	586
BclI	TGATCA	2 cut(s)	118, 247
BcnI	CCSGG	1 cut(s)	66
BcoDI	GTCTC	2 cut(s)	224, 455
BfaI	CTAG	1 cut(s)	615
BisI	GCNGC	2 cut(s)	31, 164
BlsI	GCNGC	2 cut(s)	32, 165
Bme1390I	CCNGG	2 cut(s)	66, 586
Bme18I	GGWCC	1 cut(s)	89
BmeT110I	CYCGRG	1 cut(s)	102
BmgT120I	GGNCC	1 cut(s)	89
BmrFI	CCNGG	2 cut(s)	66, 586
BmsI	GCATC	2 cut(s)	158, 751
Bpu14I	TTCGAA	1 cut(s)	735
BpuEI	CTTGAG	1 cut(s)	206
BpuMI	CCSGG	1 cut(s)	66
BsaAI	YACGTR	2 cut(s)	20, 598
BsaBI	GATNNNNATC	1 cut(s)	246
BsaJI	CCNNGG	3 cut(s)	317, 359, 541
Bsc4I	CCNNNNNNNGG	1 cut(s)	71
Bse8I	GATNNNNATC	1 cut(s)	246
BseBI	CCWGG	1 cut(s)	586
BseDI	CCNNGG	3 cut(s)	317, 359, 541
BseGI	GGATG	2 cut(s)	149, 220
BseJI	GATNNNNATC	1 cut(s)	246
BseLI	CCNNNNNNNGG	1 cut(s)	71
BseMII	CTCAG	1 cut(s)	492
BseRI	GAGGAG	2 cut(s)	203, 473
BseXI	GCAGC	1 cut(s)	42
Bsh1236I	CGCG	1 cut(s)	166
BshFI	GGCC	2 cut(s)	51, 540
BsiHKCI	CYCGRG	1 cut(s)	102
BsiSI	CCGG	1 cut(s)	66
BslI	CCNNNNNNNGG	1 cut(s)	71
BsmAI	GTCTC	2 cut(s)	224, 455
BsmI	GAATGC	1 cut(s)	580
BsnI	GGCC	2 cut(s)	51, 540
BsoBI	CYCGRG	1 cut(s)	102
Bsp119I	TTCGAA	1 cut(s)	735
Bsp143I	GATC	5 cut(s)	118, 138, 247, 545, 753
BspACI	CCGC	9 cut(s)	69, 164, 307, 349, 370, 385, 396, 410, 697
BspANI	GGCC	2 cut(s)	51, 540
BspCNI	CTCAG	1 cut(s)	491
BspFNI	CGCG	1 cut(s)	166
BspPI	GGATC	3 cut(s)	146, 553, 761
BspT104I	TTCGAA	1 cut(s)	735
BssECI	CCNNGG	3 cut(s)	317, 359, 541
BssMI	GATC	5 cut(s)	118, 138, 247, 545, 753
BssNAI	GTATAC	1 cut(s)	271
BssT1I	CCWWGG	1 cut(s)	541
Bst1107I	GTATAC	1 cut(s)	271
Bst2UI	CCWGG	1 cut(s)	586
Bst4CI	ACNGT	1 cut(s)	631
Bst6I	CTCTTC	1 cut(s)	520
BstBAI	YACGTR	2 cut(s)	20, 598
BstBI	TTCGAA	1 cut(s)	735
BstC8I	GCNNGC	1 cut(s)	766
BstDEI	CTNAG	1 cut(s)	478
BstDSI	CCRYGG	2 cut(s)	317, 359
BstF5I	GGATG	2 cut(s)	149, 220
BstFNI	CGCG	1 cut(s)	166
BstKTI	GATC	5 cut(s)	121, 141, 250, 548, 756
BstMAI	GTCTC	2 cut(s)	224, 455
BstMBI	GATC	5 cut(s)	118, 138, 247, 545, 753
BstMWI	GCNNNNNNNGC	1 cut(s)	155
BstNI	CCWGG	1 cut(s)	586
BstNSI	RCATGY	1 cut(s)	768
BstSCI	CCNGG	2 cut(s)	64, 584
BstUI	CGCG	1 cut(s)	166
BstV1I	GCAGC	1 cut(s)	42
BstX2I	RGATCY	1 cut(s)	545
BstYI	RGATCY	1 cut(s)	545
BstZ17I	GTATAC	1 cut(s)	271
BsuRI	GGCC	2 cut(s)	51, 540
BtgI	CCRYGG	2 cut(s)	317, 359
BtsCI	GGATG	2 cut(s)	149, 220
BtsIMutI	CAGTG	1 cut(s)	636
Cac8I	GCNNGC	1 cut(s)	766
Cfr13I	GGNCC	1 cut(s)	89
CseI	GACGC	1 cut(s)	155
Csp6I	GTAC	1 cut(s)	595
CviAII	CATG	5 cut(s)	170, 300, 345, 570, 765
CviJI	RGCY	7 cut(s)	33, 51, 163, 196, 322, 452, 540
CviKI_1	RGCY	7 cut(s)	33, 51, 163, 196, 322, 452, 540
CviQI	GTAC	1 cut(s)	595
DdeI	CTNAG	1 cut(s)	478
DpnI	GATC	5 cut(s)	120, 140, 249, 547, 755
DpnII	GATC	5 cut(s)	118, 138, 247, 545, 753
EaeI	YGGCCR	1 cut(s)	49
Eam1104I	CTCTTC	1 cut(s)	520
EarI	CTCTTC	1 cut(s)	520
Eco130I	CCWWGG	1 cut(s)	541
Eco47I	GGWCC	1 cut(s)	89
Eco72I	CACGTG	1 cut(s)	20
Eco88I	CYCGRG	1 cut(s)	102
EcoRII	CCWGG	1 cut(s)	584
EcoT14I	CCWWGG	1 cut(s)	541
EcoT22I	ATGCAT	1 cut(s)	766
ErhI	CCWWGG	1 cut(s)	541
FaeI	CATG	5 cut(s)	173, 303, 348, 573, 768
FatI	CATG	5 cut(s)	169, 299, 344, 569, 764
FauI	CCCGC	6 cut(s)	300, 342, 377, 378, 403, 403
FbaI	TGATCA	2 cut(s)	118, 247
FblI	GTMKAC	1 cut(s)	270
Fnu4HI	GCNGC	2 cut(s)	31, 164
FokI	GGATG	2 cut(s)	136, 227
Fsp4HI	GCNGC	2 cut(s)	31, 164
FspBI	CTAG	1 cut(s)	615
GluI	GCNGC	2 cut(s)	31, 164
HaeIII	GGCC	2 cut(s)	51, 540
HapII	CCGG	1 cut(s)	66
HgaI	GACGC	1 cut(s)	155
Hin1II	CATG	5 cut(s)	173, 303, 348, 573, 768
HincII	GTYRAC	3 cut(s)	313, 355, 366
HindII	GTYRAC	3 cut(s)	313, 355, 366
HinfI	GANTC	3 cut(s)	75, 419, 528
HpaII	CCGG	1 cut(s)	66
HphI	GGTGA	3 cut(s)	92, 121, 257
Hpy166II	GTNNAC	6 cut(s)	271, 294, 313, 355, 366, 641
Hpy188I	TCNGA	5 cut(s)	143, 256, 442, 669, 753
Hpy188III	TCNNGA	3 cut(s)	185, 519, 638
Hpy8I	GTNNAC	6 cut(s)	271, 294, 313, 355, 366, 641
Hpy99I	CGWCG	1 cut(s)	158
HpyCH4III	ACNGT	1 cut(s)	631
HpyCH4IV	ACGT	2 cut(s)	19, 597
HpyCH4V	TGCA	2 cut(s)	487, 764
HpyF10VI	GCNNNNNNNGC	1 cut(s)	155
HpyF3I	CTNAG	1 cut(s)	478
HpySE526I	ACGT	2 cut(s)	19, 597
Hsp92II	CATG	5 cut(s)	173, 303, 348, 573, 768
Ksp22I	TGATCA	2 cut(s)	118, 247
Kzo9I	GATC	5 cut(s)	118, 138, 247, 545, 753
LpnPI	CCDG	5 cut(s)	79, 465, 571, 598, 782
Lsp1109I	GCAGC	1 cut(s)	42
LweI	GCATC	2 cut(s)	158, 751
MaeI	CTAG	1 cut(s)	615
MaeII	ACGT	2 cut(s)	19, 597
MalI	GATC	5 cut(s)	120, 140, 249, 547, 755
MboI	GATC	5 cut(s)	118, 138, 247, 545, 753
MboII	GAAGA	6 cut(s)	17, 95, 507, 617, 656, 787
MfeI	CAATTG	1 cut(s)	795
MflI	RGATCY	1 cut(s)	545
MlsI	TGGCCA	1 cut(s)	51
MluCI	AATT	2 cut(s)	443, 795
MluNI	TGGCCA	1 cut(s)	51
MlyI	GAGTC	2 cut(s)	84, 428
MmeI	TCCRAC	1 cut(s)	119
MnlI	CCTC	4 cut(s)	102, 181, 199, 451
Mox20I	TGGCCA	1 cut(s)	51
Mph1103I	ATGCAT	1 cut(s)	766
MscI	TGGCCA	1 cut(s)	51
MseI	TTAA	2 cut(s)	335, 377
MslI	CAYNNNNRTG	2 cut(s)	574, 769
Msp20I	TGGCCA	1 cut(s)	51
MspI	CCGG	1 cut(s)	66
MspR9I	CCNGG	2 cut(s)	66, 586
MunI	CAATTG	1 cut(s)	795
Mva1269I	GAATGC	1 cut(s)	580
MvaI	CCWGG	1 cut(s)	586
MvnI	CGCG	1 cut(s)	166
MwoI	GCNNNNNNNGC	1 cut(s)	155
NciI	CCSGG	1 cut(s)	66
NdeII	GATC	5 cut(s)	118, 138, 247, 545, 753
NlaIII	CATG	5 cut(s)	173, 303, 348, 573, 768
NmeAIII	GCCGAG	2 cut(s)	184, 516
NsiI	ATGCAT	1 cut(s)	766
NspI	RCATGY	1 cut(s)	768
NspV	TTCGAA	1 cut(s)	735
PaeI	GCATGC	1 cut(s)	768
PaeR7I	CTCGAG	1 cut(s)	102
PctI	GAATGC	1 cut(s)	580
PfeI	GAWTC	1 cut(s)	528
PkrI	GCNGC	2 cut(s)	32, 165
PleI	GAGTC	2 cut(s)	83, 427
PmaCI	CACGTG	1 cut(s)	20
PmlI	CACGTG	1 cut(s)	20
PpsI	GAGTC	2 cut(s)	83, 427
Ppu21I	YACGTR	2 cut(s)	20, 598
Psp6I	CCWGG	1 cut(s)	584
PspCI	CACGTG	1 cut(s)	20
PspGI	CCWGG	1 cut(s)	584
PspPI	GGNCC	1 cut(s)	89
PspXI	VCTCGAGB	1 cut(s)	102
PsuI	RGATCY	1 cut(s)	545
RsaI	GTAC	1 cut(s)	596
RsaNI	GTAC	1 cut(s)	595
RseI	CAYNNNNRTG	2 cut(s)	574, 769
SaqAI	TTAA	2 cut(s)	335, 377
SatI	GCNGC	2 cut(s)	31, 164
Sau3AI	GATC	5 cut(s)	118, 138, 247, 545, 753
Sau96I	GGNCC	1 cut(s)	89
SchI	GAGTC	2 cut(s)	84, 428
ScrFI	CCNGG	2 cut(s)	66, 586
SetI	ASST	7 cut(s)	22, 94, 198, 484, 590, 600, 624
SfaNI	GCATC	2 cut(s)	158, 751
Sfr274I	CTCGAG	1 cut(s)	102
SfuI	TTCGAA	1 cut(s)	735
SinI	GGWCC	1 cut(s)	89
SlaI	CTCGAG	1 cut(s)	102
SmiMI	CAYNNNNRTG	2 cut(s)	574, 769
SmlI	CTYRAG	2 cut(s)	102, 185
SmoI	CTYRAG	2 cut(s)	102, 185
SphI	GCATGC	1 cut(s)	768
Sse9I	AATT	2 cut(s)	443, 795
SsiI	CCGC	9 cut(s)	69, 164, 307, 349, 370, 385, 396, 410, 697
SspMI	CTAG	1 cut(s)	615
StyD4I	CCNGG	2 cut(s)	64, 584
StyI	CCWWGG	1 cut(s)	541
TaaI	ACNGT	1 cut(s)	631
TaiI	ACGT	2 cut(s)	22, 600
TaqI	TCGA	4 cut(s)	103, 417, 526, 735
TasI	AATT	2 cut(s)	443, 795
TauI	GCSGC	1 cut(s)	166
TfiI	GAWTC	1 cut(s)	528
Tru1I	TTAA	2 cut(s)	335, 377
Tru9I	TTAA	2 cut(s)	335, 377
TscAI	CASTG	1 cut(s)	636
TseI	GCWGC	1 cut(s)	30
TspDTI	ATGAA	3 cut(s)	39, 288, 618
TspGWI	ACGGA	2 cut(s)	29, 142
TspRI	CASTG	1 cut(s)	636
VpaK11BI	GGWCC	1 cut(s)	89
XceI	RCATGY	1 cut(s)	768
XcmI	CCANNNNNNNNNTGG	1 cut(s)	335
XhoI	CTCGAG	1 cut(s)	102
XmiI	GTMKAC	1 cut(s)	270
XspI	CTAG	1 cut(s)	615
Zsp2I	ATGCAT	1 cut(s)	766

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.