Rh5AG365400

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000074
Physical Location & Seq
Reverse (-)
61642330 .. 61645164
2835 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG365400.1

Sequence Viewer

Length: 2835 bp
ATGGACACAGACGAAGGGGGCCTTAGGTACAGTGACCATATTTATCATGAGTGTTTATCATCAGACGATGAATCAGAAGATGAAATTTTGATTCGGTTTGGTAAATGCACTAAGGTAACAGCGCGTACAAAGGAGGCAAATGACAGTATAATACCTGGTGAATCAGGGGAATTGAGGAAATCACCAGGCGTAGTTGAAGAGGAGGAAACATTACCTGAGTGCGCCGTTGAAAGAACAGAATATGTGAACCACACGGGGTCCGCACAGCTGAATGGGAAGCACTTCGAAGACCTCACAATGGATGATATGATGGGGGTATACTTCCCAACTGTAGAAGAGGCAGAAAAGTTCTACTCGCTGTACTCACGAATACTTGGTTTCAGCGTAAGGAGGGACAGATTGCAGAAGGAAGGCAATGGTTTGGTGGTAAGGAGGCAGTGGGTCTGTTCAAAACAAGGATTGGCAAGTATCAAGTGCAGGAAGCAAAAAGGTGTGGATAAGAACAAAACTGCAAATAATGAGAAAATTGGCGAGCAGAAAAAATCGAGGAGGAACATAATACCGAGGGGAGTAAGATACACAAGAGTTAACTGCCCGGTTTCATTTAGTGTTCGATATTGCAAAGATAAGGAGCTATACCGCGTGACTAAGTTTGTACAGGAGCACAATCATGACCTTGCAAAGTCCCATGAAGTTCAGTTCTTGCGGTCAAACCGTCGCGTGGAAGACAAAGATGTTGCTCAGGTGGAGTGCCTGCGCCGCGCACAAGTCCACACTAGTAGGGCGTATGAGCAACTGGTAGAGCAAGCCGGGGGACACGACGGTGTTGGCTTCTTGATGAAGGATCTGTACAACAAGATTTATGAGTTGAGGAAAAATGCTGAGATGGATGGAGATGCACAGGCTGCCATCACTTGGATGAACATGAGGGGAATGGAGTCAGAAGAGTTCTGCTGCAGGTACAGTTTAGATGAAGAAGGCAGACTTGCCAATCTGTTTTGGAGGGACTACCAATCATTTTTGGACTACAGCGCATATAGTGATGTGGTCATTATGGACAGCACATACAAGACAAATTTGTACGGAAAGCCTCTTGTTGTATTTGTTGGGTGCAATAATCACAGAGCTACAGTTGTTTTCGGGTTTGCCCTTATACGGGATGAGAGGGAGGATACGTACACATGGGTGTTCGAGAACTTCCTTGAGTCCATGGATTATAAACAACCTTCATCCATCCTAACCGATGGCGATGAGTCAATCAGAAAGGTTGTTGAGCGGGTGATGCCAATAGCTCGGCACAGGTTATGTGCATGGCACATTGGAAGAAACATATCGCAGAATGTGAAGGATGTTGCAGATCAGAAAAGTCTTTCAAAAATGATTTATTCCTCAATGTGTGTCAGTGAATGGGAGGCAGCTTGGCAGTCAATTGTGGTTAGAAATGGGTTGTCGGACAATGCATGGGTTATAAGTTTGTATAACAAACGGGAGAGGTGGGCAGAAGCATTCTTCAGAGGGCACTTCTTCGGTGGAATGTGCAGTACGCAGCGCGTCGAAGGCATGCACGCAAAGCTGAAAAAGGAGATTGGGAGGCACACTAGGTTATGTGAAGTTATGCCAAGAATGGAGAGGACACTTGGCCGCATCCGGAATCGCGTACTGTATGACAACTTCAGGTCTAAAAACGGTGCTCCAGTATATGAGACACACATGAGGGGAATAGAGGAAGACGCATGTAGGCTGTTCACACACGACATCTTTGTTATGATTAAGTCCCAAATCTTGTTTGAGAGGAGGTTTGTTCTGGTGCAGAAAGTACCATTTCCCATTTCTGATACAGTGATGTTCTACCTTGCCCAATATGATAGGCCTGAACGACGGTGGTGTGTTGAGTTCCATTCAGACCCGACAAACCCAACATGGCTGTGCTCCTGCAAACTTTTTGAATCAGATGGTATTCCTTGTGGTCACATTTTCTGTGTCTTGAAAGATCAGCTTCTGTCAAGATATCCGGCGTCTTTGATAACCAAACGTTGGACAAAGTGTGTCAGTGATTCAACAGTTGCACCCAAAATTAAGGTCCCCGATCACGACAAGTCAGCTCAGGTGGCCAGGTATTCTGCCCTCATATCAGAAGTGTCCAAAGCGTGCTTAAATTACTCATTTTCAGATGAAGGTTTCAGGGTAGGAATGATTGAATTTGCAAGGCTAGTTCAAAGCTCAAGTGAGTTCAAGATAGATCCACCCATGGACACATCAAGAGTGCCTCCGAGCAGAAACGTTGTGAGGGACCCGAAAATATCCCGTACAAAGGGCATGCCCTCTAATCCCACAACAAACACTGAAAATGCCAACAAAGAGCAGCGGCTTTGCGGTAAATGTTTTATGCCCGGTCATAACAGGCGCACCTGTACAGCCGGTGAAGAAGGGGTTCGAAATCGTGGATATGCAGATTCCCATCATACGGTACCTTGTGTTGAAGCTTACTCAGGTTCGGTACCTGATGTTGCACCATCAGTCCCAAATATGGCACACCTATCATCCTATGTGGTAGCCGCAGTCCCTGATCCCCCTGCCTCAGTTCAGCTTCCCGCAGACTTACCATATCATCCCACACCTTGTGTAACTGAGTATGGTATGGAGCTTGATTTTGATGACAAGGGCGCTAGCAGAGTTGGTGGTATTGGTCAATTCCCATTCTTCGTTGCATCCCAGCATTCCTCATCCTTCGGTATTCTGCCTTTTTCATTCAACCTGAACCAGACCGCCCCAAATGATGATGTTACGCAGCTGAAACCGGACTGTTCATATCCACCCCCCAAGTGGATCCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

944

Amino Acids

107.92

Weight (kDa)

7.48

Isoelectric Point (pI)

46.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 116 - 227 7.8e-13 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 320 - 432 2e-08 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 349 - 442 1.6e-25 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1218, 1469
Acc36I ACCTGC 1 cut(s) 948
Acc65I GGTACC 2 cut(s) 2467, 2497
AccB1I GGYRCC 2 cut(s) 2467, 2497
AccB7I CCANNNNNTGG 2 cut(s) 915, 2034
AccBSI CCGCTC 1 cut(s) 1276
AccI GTMKAC 1 cut(s) 318
AccII CGCG 6 cut(s) 124, 642, 720, 762, 1551, 1656
AccIII TCCGGA 1 cut(s) 1647
AclI AACGTT 2 cut(s) 2032, 2280
AclWI GGATC 5 cut(s) 852, 2234, 2561, 2821, 2834
AcoI YGGCCR 2 cut(s) 1639, 2109
AcsI RAATTY 3 cut(s) 84, 1075, 2198
AcuI CTGAAG 2 cut(s) 1495, 1657
AcyI GRCGYC 1 cut(s) 2015
AdeI CACNNNGTG 1 cut(s) 2621
AhlI ACTAGT 1 cut(s) 776
AjnI CCWGG 3 cut(s) 154, 184, 2111
AleI CACNNNNGTG 2 cut(s) 822, 1184
Alw21I GWGCWC 3 cut(s) 666, 1693, 1931
Alw26I GTCTC 1 cut(s) 1697
AlwI GGATC 5 cut(s) 852, 2234, 2561, 2821, 2834
AlwNI CAGNNNCTG 2 cut(s) 1999, 2564
Aor13HI TCCGGA 1 cut(s) 1647
AoxI GGCC 4 cut(s) 19, 1639, 1868, 2109
ApeKI GCWGC 6 cut(s) 905, 954, 1415, 1546, 2362, 2788
ApoI RAATTY 3 cut(s) 84, 1075, 2198
ArsI GACNNNNNNTTYG 2 cut(s) 2064, 2096
Asp700I GAANNNNTTC 2 cut(s) 281, 2430
Asp718I GGTACC 2 cut(s) 2467, 2497
AspLEI GCGC 8 cut(s) 124, 224, 759, 764, 1034, 1551, 2406, 2666
AspS9I GGNCC 4 cut(s) 19, 258, 2080, 2290
AsuC2I CCSGG 3 cut(s) 596, 811, 2391
AsuHPI GGTGA 4 cut(s) 170, 174, 1291, 2432
AsuII TTCGAA 2 cut(s) 285, 2434
AsuNHI GCTAGC 1 cut(s) 2666
AvaII GGWCC 3 cut(s) 258, 2080, 2290
AxyI CCTNAGG 1 cut(s) 23
BaeGI GKGCMC 1 cut(s) 1521
BalI TGGCCA 1 cut(s) 2111
BamHI GGATCC 1 cut(s) 2826
BanI GGYRCC 2 cut(s) 2467, 2497
BarI GAAGNNNNNNTAC 4 cut(s) 833, 865, 1655, 1687
BbsI GAAGAC 3 cut(s) 294, 732, 1734
Bbv12I GWGCWC 3 cut(s) 666, 1693, 1931
BbvI GCAGC 6 cut(s) 892, 941, 1427, 1558, 2374, 2800
BccI CCATC 9 cut(s) 304, 880, 884, 917, 1238, 1241, 1946, 2466, 2521
BceAI ACGGC 1 cut(s) 209
BciT130I CCWGG 3 cut(s) 156, 186, 2113
BciVI GTATCC 1 cut(s) 1165
BcnI CCSGG 3 cut(s) 596, 811, 2391
BcoDI GTCTC 1 cut(s) 1697
BcuI ACTAGT 1 cut(s) 776
BfaI CTAG 4 cut(s) 777, 1599, 2210, 2667
BfmI CTRYAG 4 cut(s) 330, 955, 1027, 1128
BfoI RGCGCY 1 cut(s) 2667
BfuAI ACCTGC 1 cut(s) 948
BfuI GTATCC 1 cut(s) 1165
Bme1390I CCNGG 6 cut(s) 156, 186, 596, 811, 2113, 2391
Bme18I GGWCC 3 cut(s) 258, 2080, 2290
BmgT120I GGNCC 4 cut(s) 19, 258, 2080, 2290
BmiI GGNNCC 8 cut(s) 20, 259, 2082, 2291, 2292, 2469, 2499, 2828
BmrFI CCNGG 6 cut(s) 156, 186, 596, 811, 2113, 2391
BmsI GCATC 4 cut(s) 886, 1272, 1653, 2717
BmtI GCTAGC 1 cut(s) 2670
BpiI GAAGAC 3 cut(s) 294, 732, 1734
BpmI CTGGAG 1 cut(s) 1677
Bpu10I CCTNAGC 2 cut(s) 741, 2103
Bpu14I TTCGAA 2 cut(s) 285, 2434
BpuEI CTTGAG 2 cut(s) 1223, 2206
BpuMI CCSGG 3 cut(s) 596, 811, 2391
BsaAI YACGTR 1 cut(s) 1176
BsaBI GATNNNNATC 1 cut(s) 2457
BsaHI GRCGYC 1 cut(s) 2015
BsaJI CCNNGG 4 cut(s) 563, 810, 1209, 2247
BsaWI WCCGGW 2 cut(s) 1647, 2797
BsaXI ACNNNNNCTCC 2 cut(s) 1160, 1190
Bse118I RCCGGY 1 cut(s) 2417
Bse1I ACTGG 2 cut(s) 801, 1694
Bse21I CCTNAGG 1 cut(s) 23
Bse3DI GCAATG 1 cut(s) 421
Bse8I GATNNNNATC 1 cut(s) 2457
BseAI TCCGGA 1 cut(s) 1647
BseBI CCWGG 3 cut(s) 156, 186, 2113
BseDI CCNNGG 4 cut(s) 563, 810, 1209, 2247
BseJI GATNNNNATC 1 cut(s) 2457
BseMI GCAATG 1 cut(s) 421
BseMII CTCAG 7 cut(s) 207, 755, 873, 2117, 2502, 2592, 2619
BseNI ACTGG 2 cut(s) 801, 1694
BseRI GAGGAG 3 cut(s) 215, 562, 1807
BseSI GKGCMC 1 cut(s) 1521
BseXI GCAGC 6 cut(s) 892, 941, 1427, 1558, 2374, 2800
BseYI CCCAGC 1 cut(s) 2712
BsgI GTGCAG 3 cut(s) 496, 1558, 1829
Bsh1236I CGCG 6 cut(s) 124, 642, 720, 762, 1551, 1656
BshFI GGCC 4 cut(s) 21, 1641, 1870, 2111
BshNI GGYRCC 2 cut(s) 2467, 2497
BsiHKAI GWGCWC 3 cut(s) 666, 1693, 1931
BsiSI CCGG 7 cut(s) 596, 810, 1648, 2012, 2391, 2418, 2798
BslFI GGGAC 9 cut(s) 407, 670, 828, 1019, 1759, 2066, 2303, 2504, 2546
BsmAI GTCTC 1 cut(s) 1697
BsmFI GGGAC 9 cut(s) 407, 670, 828, 1019, 1759, 2066, 2303, 2504, 2546
BsmI GAATGC 2 cut(s) 1505, 2716
BsnI GGCC 4 cut(s) 21, 1641, 1870, 2111
Bsp119I TTCGAA 2 cut(s) 285, 2434
Bsp1286I GDGCHC 4 cut(s) 666, 1521, 1693, 1931
Bsp13I TCCGGA 1 cut(s) 1647
Bsp1407I TGTACA 3 cut(s) 655, 849, 2411
Bsp143I GATC 7 cut(s) 844, 1357, 1990, 2086, 2239, 2566, 2826
Bsp19I CCATGG 2 cut(s) 1209, 2247
BspANI GGCC 4 cut(s) 21, 1641, 1870, 2111
BspCNI CTCAG 7 cut(s) 208, 754, 874, 2116, 2501, 2591, 2620
BspEI TCCGGA 1 cut(s) 1647
BspFNI CGCG 6 cut(s) 124, 642, 720, 762, 1551, 1656
BspHI TCATGA 2 cut(s) 46, 670
BspLI GGNNCC 8 cut(s) 20, 259, 2082, 2291, 2292, 2469, 2499, 2828
BspMAI CTGCAG 1 cut(s) 959
BspMI ACCTGC 1 cut(s) 948
BspOI GCTAGC 1 cut(s) 2670
BspPI GGATC 5 cut(s) 852, 2234, 2561, 2821, 2834
BspT104I TTCGAA 2 cut(s) 285, 2434
BspT107I GGYRCC 2 cut(s) 2467, 2497
BsrBI CCGCTC 1 cut(s) 1276
BsrDI GCAATG 1 cut(s) 421
BsrFI RCCGGY 1 cut(s) 2417
BsrGI TGTACA 3 cut(s) 655, 849, 2411
BsrI ACTGG 2 cut(s) 801, 1694
BssAI RCCGGY 1 cut(s) 2417
BssECI CCNNGG 4 cut(s) 563, 810, 1209, 2247
BssMI GATC 7 cut(s) 844, 1357, 1990, 2086, 2239, 2566, 2826
BssNAI GTATAC 1 cut(s) 319
BssNI GRCGYC 1 cut(s) 2015
BssT1I CCWWGG 2 cut(s) 1209, 2247
Bst1107I GTATAC 1 cut(s) 319
Bst2UI CCWGG 3 cut(s) 156, 186, 2113
Bst6I CTCTTC 3 cut(s) 192, 330, 939
BstACI GRCGYC 1 cut(s) 2015
BstAPI GCANNNNNTGC 1 cut(s) 905
BstAUI TGTACA 3 cut(s) 655, 849, 2411
BstBAI YACGTR 1 cut(s) 1176
BstBI TTCGAA 2 cut(s) 285, 2434
BstC8I GCNNGC 8 cut(s) 533, 755, 807, 1562, 1566, 2149, 2318, 2668
BstDSI CCRYGG 2 cut(s) 1209, 2247
BstFNI CGCG 6 cut(s) 124, 642, 720, 762, 1551, 1656
BstH2I RGCGCY 1 cut(s) 2667
BstHHI GCGC 8 cut(s) 124, 224, 759, 764, 1034, 1551, 2406, 2666
BstKTI GATC 7 cut(s) 847, 1360, 1993, 2089, 2242, 2569, 2829
BstMAI GTCTC 1 cut(s) 1697
BstMBI GATC 7 cut(s) 844, 1357, 1990, 2086, 2239, 2566, 2826
BstMWI GCNNNNNNNGC 6 cut(s) 759, 905, 1282, 1557, 1570, 2108
BstNI CCWGG 3 cut(s) 156, 186, 2113
BstNSI RCATGY 3 cut(s) 1564, 1737, 2320
BstSCI CCNGG 6 cut(s) 154, 184, 594, 809, 2111, 2389
BstSFI CTRYAG 4 cut(s) 330, 955, 1027, 1128
BstSLI GKGCMC 1 cut(s) 1521
BstSNI TACGTA 1 cut(s) 1176
BstUI CGCG 6 cut(s) 124, 642, 720, 762, 1551, 1656
BstV1I GCAGC 6 cut(s) 892, 941, 1427, 1558, 2374, 2800
BstV2I GAAGAC 3 cut(s) 294, 732, 1734
BstX2I RGATCY 3 cut(s) 844, 2239, 2826
BstYI RGATCY 3 cut(s) 844, 2239, 2826
BstZ17I GTATAC 1 cut(s) 319
Bsu36I CCTNAGG 1 cut(s) 23
BsuI GTATCC 1 cut(s) 1165
BsuRI GGCC 4 cut(s) 21, 1641, 1870, 2111
BtgI CCRYGG 2 cut(s) 1209, 2247
BtgZI GCGATG 1 cut(s) 1263
BtsI GCAGTG 1 cut(s) 443
BtsIMutI CAGTG 6 cut(s) 37, 443, 1408, 1845, 2056, 2340
BveI ACCTGC 1 cut(s) 948
Cac8I GCNNGC 8 cut(s) 533, 755, 807, 1562, 1566, 2149, 2318, 2668
CaiI CAGNNNCTG 2 cut(s) 1999, 2564
CciI TCATGA 2 cut(s) 46, 670
CfoI GCGC 8 cut(s) 124, 224, 759, 764, 1034, 1551, 2406, 2666
Cfr10I RCCGGY 1 cut(s) 2417
Cfr13I GGNCC 4 cut(s) 19, 258, 2080, 2290
CseI GACGC 3 cut(s) 1540, 1739, 2004
CsiI ACCWGGT 1 cut(s) 154
DpnI GATC 7 cut(s) 846, 1359, 1992, 2088, 2241, 2568, 2828
DpnII GATC 7 cut(s) 844, 1357, 1990, 2086, 2239, 2566, 2826
DraIII CACNNNGTG 1 cut(s) 2621
EaeI YGGCCR 2 cut(s) 1639, 2109
Eam1104I CTCTTC 3 cut(s) 192, 330, 939
EarI CTCTTC 3 cut(s) 192, 330, 939
Eco105I TACGTA 1 cut(s) 1176
Eco130I CCWWGG 2 cut(s) 1209, 2247
Eco147I AGGCCT 1 cut(s) 1870
Eco32I GATATC 1 cut(s) 2009
Eco47I GGWCC 3 cut(s) 258, 2080, 2290
Eco57I CTGAAG 2 cut(s) 1495, 1657
Eco81I CCTNAGG 1 cut(s) 23
EcoO109I RGGNCCY 3 cut(s) 19, 2080, 2290
EcoRII CCWGG 3 cut(s) 154, 184, 2111
EcoRV GATATC 1 cut(s) 2009
EcoT14I CCWWGG 2 cut(s) 1209, 2247
EcoT22I ATGCAT 1 cut(s) 1462
ErhI CCWWGG 2 cut(s) 1209, 2247
FalI AAGNNNNNCTT 5 cut(s) 38, 969, 1001, 1980, 2012
FaqI GGGAC 9 cut(s) 407, 670, 828, 1019, 1759, 2066, 2303, 2504, 2546
FauI CCCGC 2 cut(s) 1269, 2599
FblI GTMKAC 1 cut(s) 318
FspBI CTAG 4 cut(s) 777, 1599, 2210, 2667
GlaI GCGC 8 cut(s) 123, 223, 758, 763, 1033, 1550, 2405, 2665
GsaI CCCAGC 1 cut(s) 2716
GsuI CTGGAG 1 cut(s) 1677
HaeII RGCGCY 1 cut(s) 2667
HaeIII GGCC 4 cut(s) 21, 1641, 1870, 2111
HapII CCGG 7 cut(s) 596, 810, 1648, 2012, 2391, 2418, 2798
HgaI GACGC 3 cut(s) 1540, 1739, 2004
HhaI GCGC 8 cut(s) 124, 224, 759, 764, 1034, 1551, 2406, 2666
Hin1I GRCGYC 1 cut(s) 2015
Hin6I GCGC 8 cut(s) 122, 222, 757, 762, 1032, 1549, 2404, 2664
HinP1I GCGC 8 cut(s) 122, 222, 757, 762, 1032, 1549, 2404, 2664
HincII GTYRAC 1 cut(s) 589
HindII GTYRAC 1 cut(s) 589
HindIII AAGCTT 1 cut(s) 2481
HpaI GTTAAC 1 cut(s) 589
HpaII CCGG 7 cut(s) 596, 810, 1648, 2012, 2391, 2418, 2798
HphI GGTGA 4 cut(s) 170, 174, 1291, 2432
Hpy166II GTNNAC 6 cut(s) 247, 319, 589, 772, 1179, 1746
Hpy8I GTNNAC 6 cut(s) 247, 319, 589, 772, 1179, 1746
Hpy99I CGWCG 4 cut(s) 720, 824, 1556, 1881
HpyCH4IV ACGT 3 cut(s) 1175, 2032, 2280
HpyF10VI GCNNNNNNNGC 6 cut(s) 759, 905, 1282, 1557, 1570, 2108
HpySE526I ACGT 3 cut(s) 1175, 2032, 2280
Hsp92I GRCGYC 1 cut(s) 2015
HspAI GCGC 8 cut(s) 122, 222, 757, 762, 1032, 1549, 2404, 2664
KflI GGGWCCC 1 cut(s) 2290
Kpn2I TCCGGA 1 cut(s) 1647
KpnI GGTACC 2 cut(s) 2471, 2501
KspAI GTTAAC 1 cut(s) 589
Kzo9I GATC 7 cut(s) 844, 1357, 1990, 2086, 2239, 2566, 2826
LmnI GCTCC 5 cut(s) 631, 661, 1696, 1934, 2641
Lsp1109I GCAGC 6 cut(s) 892, 941, 1427, 1558, 2374, 2800
LweI GCATC 4 cut(s) 886, 1272, 1653, 2717
MabI ACCWGGT 1 cut(s) 154
MaeI CTAG 4 cut(s) 777, 1599, 2210, 2667
MaeII ACGT 3 cut(s) 1175, 2032, 2280
MaeIII GTNAC 6 cut(s) 32, 115, 643, 1967, 2623, 2782
MalI GATC 7 cut(s) 846, 1359, 1992, 2088, 2241, 2568, 2828
MbiI CCGCTC 1 cut(s) 1276
MboI GATC 7 cut(s) 844, 1357, 1990, 2086, 2239, 2566, 2826
MfeI CAATTG 1 cut(s) 1428
MflI RGATCY 3 cut(s) 844, 2239, 2826
MhlI GDGCHC 4 cut(s) 666, 1521, 1693, 1931
MlsI TGGCCA 1 cut(s) 2111
MluCI AATT 9 cut(s) 84, 170, 525, 1075, 1428, 2073, 2155, 2198, 2690
MluNI TGGCCA 1 cut(s) 2111
MlyI GAGTC 3 cut(s) 947, 1214, 1262
MmeI TCCRAC 2 cut(s) 1431, 2015
Mox20I TGGCCA 1 cut(s) 2111
Mph1103I ATGCAT 1 cut(s) 1462
MroI TCCGGA 1 cut(s) 1647
MroXI GAANNNNTTC 2 cut(s) 281, 2430
MscI TGGCCA 1 cut(s) 2111
MseI TTAA 4 cut(s) 588, 1770, 2076, 2153
MslI CAYNNNNRTG 5 cut(s) 669, 822, 917, 1184, 1924
Msp20I TGGCCA 1 cut(s) 2111
MspA1I CMGCKG 3 cut(s) 268, 2365, 2791
MspI CCGG 7 cut(s) 596, 810, 1648, 2012, 2391, 2418, 2798
MspR9I CCNGG 6 cut(s) 156, 186, 596, 811, 2113, 2391
MteI GCGCNGCGC 1 cut(s) 760
MunI CAATTG 1 cut(s) 1428
Mva1269I GAATGC 2 cut(s) 1505, 2716
MvaI CCWGG 3 cut(s) 156, 186, 2113
MvnI CGCG 6 cut(s) 124, 642, 720, 762, 1551, 1656
MwoI GCNNNNNNNGC 6 cut(s) 759, 905, 1282, 1557, 1570, 2108
NciI CCSGG 3 cut(s) 596, 811, 2391
NcoI CCATGG 2 cut(s) 1209, 2247
NdeII GATC 7 cut(s) 844, 1357, 1990, 2086, 2239, 2566, 2826
NheI GCTAGC 1 cut(s) 2666
NlaIV GGNNCC 8 cut(s) 20, 259, 2082, 2291, 2292, 2469, 2499, 2828
NmeAIII GCCGAG 1 cut(s) 1273
NmuCI GTSAC 3 cut(s) 32, 643, 1967
NsiI ATGCAT 1 cut(s) 1462
NspI RCATGY 3 cut(s) 1564, 1737, 2320
NspV TTCGAA 2 cut(s) 285, 2434
OliI CACNNNNGTG 2 cut(s) 822, 1184
PaeI GCATGC 2 cut(s) 1564, 2320
PagI TCATGA 2 cut(s) 46, 670
PceI AGGCCT 1 cut(s) 1870
PctI GAATGC 2 cut(s) 1505, 2716
PdmI GAANNNNTTC 2 cut(s) 281, 2430
PfeI GAWTC 7 cut(s) 71, 91, 161, 1651, 1946, 2054, 2453
PflMI CCANNNNNTGG 2 cut(s) 915, 2034
PleI GAGTC 3 cut(s) 946, 1213, 1261
PpsI GAGTC 3 cut(s) 946, 1213, 1261
Ppu21I YACGTR 1 cut(s) 1176
PpuMI RGGWCCY 2 cut(s) 2080, 2290
PsiI TTATAA 2 cut(s) 1218, 1469
Psp1406I AACGTT 2 cut(s) 2032, 2280
Psp5II RGGWCCY 2 cut(s) 2080, 2290
Psp6I CCWGG 3 cut(s) 154, 184, 2111
PspFI CCCAGC 1 cut(s) 2712
PspGI CCWGG 3 cut(s) 154, 184, 2111
PspN4I GGNNCC 8 cut(s) 20, 259, 2082, 2291, 2292, 2469, 2499, 2828
PspPI GGNCC 4 cut(s) 19, 258, 2080, 2290
PspPPI RGGWCCY 2 cut(s) 2080, 2290
PstI CTGCAG 1 cut(s) 959
PstNI CAGNNNCTG 2 cut(s) 1999, 2564
PsuI RGATCY 3 cut(s) 844, 2239, 2826
PvuII CAGCTG 2 cut(s) 268, 2791
RseI CAYNNNNRTG 5 cut(s) 669, 822, 917, 1184, 1924
SaqAI TTAA 4 cut(s) 588, 1770, 2076, 2153
Sau3AI GATC 7 cut(s) 844, 1357, 1990, 2086, 2239, 2566, 2826
Sau96I GGNCC 4 cut(s) 19, 258, 2080, 2290
SchI GAGTC 3 cut(s) 947, 1214, 1262
ScrFI CCNGG 6 cut(s) 156, 186, 596, 811, 2113, 2391
SduI GDGCHC 4 cut(s) 666, 1521, 1693, 1931
SexAI ACCWGGT 1 cut(s) 154
SfaNI GCATC 4 cut(s) 886, 1272, 1653, 2717
SfcI CTRYAG 4 cut(s) 330, 955, 1027, 1128
SfuI TTCGAA 2 cut(s) 285, 2434
SinI GGWCC 3 cut(s) 258, 2080, 2290
SmiMI CAYNNNNRTG 5 cut(s) 669, 822, 917, 1184, 1924
SmlI CTYRAG 2 cut(s) 1202, 2221
SmoI CTYRAG 2 cut(s) 1202, 2221
SnaBI TACGTA 1 cut(s) 1176
SpeI ACTAGT 1 cut(s) 776
SphI GCATGC 2 cut(s) 1564, 2320
Sse9I AATT 9 cut(s) 84, 170, 525, 1075, 1428, 2073, 2155, 2198, 2690
SseBI AGGCCT 1 cut(s) 1870
SspMI CTAG 4 cut(s) 777, 1599, 2210, 2667
StuI AGGCCT 1 cut(s) 1870
StyD4I CCNGG 6 cut(s) 154, 184, 594, 809, 2111, 2389
StyI CCWWGG 2 cut(s) 1209, 2247
TaiI ACGT 3 cut(s) 1178, 2035, 2283
TaqI TCGA 6 cut(s) 285, 545, 613, 1191, 1554, 2434
TasI AATT 9 cut(s) 84, 170, 525, 1075, 1428, 2073, 2155, 2198, 2690
TatI WGTACW 4 cut(s) 360, 655, 849, 2411
TauI GCSGC 4 cut(s) 762, 1644, 2368, 2558
TfiI GAWTC 7 cut(s) 71, 91, 161, 1651, 1946, 2054, 2453
Tru1I TTAA 4 cut(s) 588, 1770, 2076, 2153
Tru9I TTAA 4 cut(s) 588, 1770, 2076, 2153
TscAI CASTG 6 cut(s) 37, 443, 1408, 1845, 2056, 2347
TseFI GTSAC 3 cut(s) 32, 643, 1967
TseI GCWGC 6 cut(s) 905, 954, 1415, 1546, 2362, 2788
Tsp45I GTSAC 3 cut(s) 32, 643, 1967
TspGWI ACGGA 1 cut(s) 1098
TspRI CASTG 6 cut(s) 37, 443, 1408, 1845, 2056, 2347
Van91I CCANNNNNTGG 2 cut(s) 915, 2034
VpaK11BI GGWCC 3 cut(s) 258, 2080, 2290
XapI RAATTY 3 cut(s) 84, 1075, 2198
XceI RCATGY 3 cut(s) 1564, 1737, 2320
XcmI CCANNNNNNNNNTGG 1 cut(s) 2820
XmiI GTMKAC 1 cut(s) 318
XmnI GAANNNNTTC 2 cut(s) 281, 2430
XspI CTAG 4 cut(s) 777, 1599, 2210, 2667
Zsp2I ATGCAT 1 cut(s) 1462
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.