Rorug03G0329600

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000074
Physical Location & Seq
Reverse (-)
38157637 .. 38160306
2670 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0329600.1

Sequence Viewer

Length: 2553 bp
ATGCAAAGGAAACGTGTGAAGAATGGTGGTGACATCAGCTCCGACTTGGAGGCTCTCCGGATGGAGGATCTTGACTCATCGATTCATCCTTCACCTATTCTGCAACCTCAGATGACCTATGCTGGTACTCTCAAAAACCCGATCGATCGCTTCCGGCAGACTATGACTGAGGACTTCGAATTCACTAACGAAGACTGCTCCTACTCCCTGGGTAAGCATGGACAAAATGTTACTTTCTCTGATAAGGTTCATAATAAGTTTGATTATGAATGGCGTTGTGCTGTGATCGTTAAACTCATGGGGAAACCTAACTCCACAAACACTTTTGATTTCATGCTAAGAGGATTAAGAAGAAAATGGCAAGTGAAAGGGTGGCGGCAACTCATCGATTTACCTAATGATTTCTTCATTGTCAAGTTTAATTTGGAGGAAGATATGAATTATGCTCTCTGTGGAGGTCCTTGGATCCTTGCAGGGCAAACTCTGATTGTGAGAAAATGGAGACCTGATTTTGATCCCATGAATGAAGTGATTGGAAAGATGGCTCTATGGGTCAGAATTTTTGGTTTGCCTGTCAAATTTTTCAAGGACTATACTATGGCCAAAATTGGAAAAATCCTTAGTGATGTAGTCAAAGTGGACAAACTCACACTTGGTCAGCCTAGAGGACAGTTTGCATTGAGGTTGATTTATCCAAGCCTCTACGTCCTTTTGTTGAAGTGGAATCCATTGCTTATGATGTGGTTTATGAAGGCATCTCTCTCATATGCTTTGAGTGTGGATGCTTTGAATGATACTGGTGAAGCTGATAGAAACCTTAACACTTTTAATGCTACTGCTCCATCTCATACCCCTGGTGATGAGACATCTTCTCCACCTGAGATGAATGTTTCTACAATGCTGCAAGATGTGAATGCTCCGAGACATGGTGACATTATTAAAGAAGACATGGGACCTTGGATGTTGATGAGTTATAGGAATAAAAAGAGGATTGGAGAGTCTGGTGGAGCTAGGAAAAATAGTAATGGCAGTGGTTCCAGATTTGATGTCTTGCAGGAGGAAAGTGGCAAGGACTCTGAGTTGCCTGCACCGACCATTGAGAATAACTCTTCTGATAGCAGCCCTCCCATTGTGAAACTTTGGAAAAGCTTCCAAGAGAAGAAGAAGACAGTTCCTCTGAACAATGAGCCTACCAAAACCAAGAATGCGGCTGCTACCCATACCTCTGTAAGGAAAATTGGCCCTTCTGGTAATCTTTCTTCCTTTGTGAAAGCTACTGCTCACAATGGAAAATCTACATCTCTGAAGACTAAAGGTAGCTCTAGAATCACTATGAAAGATGTGTCTAATGTTGAAAATTCTAGTGGCTCTAAAACTGATCTTCAGTATCAAAGAAAATCAAAAAGTGTAGCTGGTTCTGGTCCTAAGCATAATTCTCACATTTTCAAAAAGCTCTCCTTTGAAAATATGGGAACCAATGCTTTAGGTGATGGAATTGCAGCCATCTTTGGGCATTGTCCTCCTGAGGAGGCCATTGGGGACATGGCTAGCACCTCATCTCTTGATATGGACTCTGAAACATTTGCGGAAAAGACCTTTACTGCTAATAGCATGATGACCAATGATGATAACCTACCTTCCCAAGATGGGGACGGTGCAGGAAGTGAGAACTTTAGATCTGCAATTGCAGACCTTGTAAAAATTCACTCTGTTGATGTGTTAGCTATTTGTGAACCCCGTGTTCAATTTTCTAAAGCTTGTGATAGTCTTACATTGCTTGGCTTCTCTGATTCAAGGGTTGTTGAAGCTGAAGGTTTCTCTGGTGGCCTTTGGTTACTTTGGAATAGTAGCAGGATTAAAATTGACTTCATTGATGAGAATTTTCAATCCATTTCTGTTAAAGTTACTCTCCCTGGCAAGCCTTCCTGGATGCTTACTGTTGTTTATGCCAGCCCGACTCACACTACTAGAGCTTCACTATGGTCTTACTTTGATAACCTTTCTACCAGGTTCAATCTTCCTTGGATGCTTATAGGTGATTTTAATGAGTTGGTCTCCTGTGCTGATAAAAATTGTGGTCCTTTCACTGGGCGTTTTGGTGGCCTTAGAGACTGGATTAATAGAAATGCTATGATTGATATGGGATTCCATGGTTCTTGCTTTACTTGGAGCAATAATAGAATCAAAGAAAGGTTGGATAGAGGTTTCTGTAATATTTCTTGGAGAACTACTTTTGATGAAGCCTTCATCCAACACTTGCCTAAAACCAGGTCTGATCACTGTCCTATTATCATGCAATTATTCTCTAACAATTTTGTGAACAGGGAGGCTGCCCCTTTTCATTTCCAAGCTATGTGGTTTTCGCATGATAACTATGTTGATTTTGTATCCAACACTTGGAGTTCTCTGACTGGTGATTTCTCCTCCAAAATCAGGGCTCTAGCTACTGCTCTTTCCAAGTGGAACAGAGATGTGTTTGGCCATCTAATGCATAAGAAAAAGAGACTCCTAGCCAGAATTGGGGGGAATTCAAAAGGCAAGAGACAGGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

850

Amino Acids

95.45

Weight (kDa)

9.04

Isoelectric Point (pI)

38.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 90 - 174 8e-12 Domain of unknown function (DUF4283)
Exo_endo_phos PF03372 547 - 760 5.9e-07 Endonuclease/Exonuclease/phosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 2397
AccIII TCCGGA 1 cut(s) 57
AciI CCGC 3 cut(s) 376, 1208, 1586
AclWI GGATC 4 cut(s) 75, 460, 473, 509
AcoI YGGCCR 2 cut(s) 600, 2479
AcsI RAATTY 7 cut(s) 179, 558, 578, 1357, 1701, 1879, 2527
AcuI CTGAAG 3 cut(s) 1325, 1367, 1830
AfaI GTAC 1 cut(s) 127
AflIII ACRYGT 1 cut(s) 13
AjnI CCWGG 6 cut(s) 207, 853, 1912, 1925, 2006, 2267
Alw26I GTCTC 7 cut(s) 496, 857, 916, 2059, 2103, 2497, 2536
AlwI GGATC 4 cut(s) 75, 460, 473, 509
Aor13HI TCCGGA 1 cut(s) 57
AoxI GGCC 6 cut(s) 600, 1240, 1530, 1825, 2101, 2479
ApeKI GCWGC 5 cut(s) 901, 1119, 1211, 1499, 2330
ApoI RAATTY 7 cut(s) 179, 558, 578, 1357, 1701, 1879, 2527
AseI ATTAAT 1 cut(s) 2118
Asp700I GAANNNNTTC 1 cut(s) 1148
AspS9I GGNCC 5 cut(s) 458, 953, 1241, 1421, 2078
AsuHPI GGTGA 8 cut(s) 41, 84, 812, 869, 941, 1499, 2048, 2426
AsuII TTCGAA 1 cut(s) 177
AsuNHI GCTAGC 1 cut(s) 1547
AvaII GGWCC 4 cut(s) 458, 953, 1421, 2078
AxyI CCTNAGG 1 cut(s) 1524
BalI TGGCCA 2 cut(s) 602, 2481
BamHI GGATCC 1 cut(s) 465
BanII GRGCYC 1 cut(s) 2440
BarI GAAGNNNNNNTAC 2 cut(s) 1243, 1275
BbsI GAAGAC 4 cut(s) 198, 951, 1172, 1313
BbvI GCAGC 5 cut(s) 888, 1131, 1198, 1511, 2317
BccI CCATC 7 cut(s) 55, 535, 850, 1484, 1511, 1640, 2490
BciT130I CCWGG 6 cut(s) 209, 855, 1914, 1927, 2008, 2269
BciVI GTATCC 1 cut(s) 2398
BclI TGATCA 1 cut(s) 2275
BcoDI GTCTC 7 cut(s) 496, 857, 916, 2059, 2103, 2497, 2536
BfaI CTAG 8 cut(s) 663, 1011, 1323, 1362, 1548, 1968, 2441, 2510
BfuI GTATCC 1 cut(s) 2398
BglII AGATCT 1 cut(s) 1676
BisI GCNGC 7 cut(s) 377, 902, 1120, 1209, 1212, 1500, 2331
BlsI GCNGC 7 cut(s) 378, 903, 1121, 1210, 1213, 1501, 2332
Bme1390I CCNGG 6 cut(s) 209, 855, 1914, 1927, 2008, 2269
Bme18I GGWCC 4 cut(s) 458, 953, 1421, 2078
BmgT120I GGNCC 5 cut(s) 458, 953, 1241, 1421, 2078
BmiI GGNNCC 4 cut(s) 467, 954, 1036, 1474
BmrFI CCNGG 6 cut(s) 209, 855, 1914, 1927, 2008, 2269
BmrI ACTGGG 1 cut(s) 2097
BmsI GCATC 4 cut(s) 764, 772, 1920, 2016
BmtI GCTAGC 1 cut(s) 1551
BmuI ACTGGG 1 cut(s) 2097
BpiI GAAGAC 4 cut(s) 198, 951, 1172, 1313
BplI GAGNNNNNCTC 4 cut(s) 1091, 1123, 2039, 2071
Bpu10I CCTNAGC 1 cut(s) 1425
Bpu14I TTCGAA 1 cut(s) 177
Bsa29I ATCGAT 3 cut(s) 80, 144, 387
BsaBI GATNNNNATC 1 cut(s) 513
BsaI GGTCTC 2 cut(s) 496, 2059
BsaJI CCNNGG 8 cut(s) 207, 208, 461, 853, 956, 1912, 2021, 2149
BsaWI WCCGGW 1 cut(s) 57
BsaXI ACNNNNNCTCC 4 cut(s) 23, 53, 856, 886
Bse1I ACTGG 4 cut(s) 802, 2092, 2117, 2416
Bse21I CCTNAGG 1 cut(s) 1524
Bse3DI GCAATG 2 cut(s) 728, 1772
Bse8I GATNNNNATC 1 cut(s) 513
BseAI TCCGGA 1 cut(s) 57
BseBI CCWGG 6 cut(s) 209, 855, 1914, 1927, 2008, 2269
BseCI ATCGAT 3 cut(s) 80, 144, 387
BseDI CCNNGG 8 cut(s) 207, 208, 461, 853, 956, 1912, 2021, 2149
BseGI GGATG 7 cut(s) 66, 85, 787, 966, 1935, 2031, 2247
BseJI GATNNNNATC 1 cut(s) 513
BseMI GCAATG 2 cut(s) 728, 1772
BseMII CTCAG 5 cut(s) 122, 159, 870, 1068, 1515
BseNI ACTGG 4 cut(s) 802, 2092, 2117, 2416
BseRI GAGGAG 2 cut(s) 1541, 2413
BseXI GCAGC 5 cut(s) 888, 1131, 1198, 1511, 2317
BsgI GTGCAG 2 cut(s) 1071, 1677
Bsh1285I CGRYCG 2 cut(s) 144, 148
BshFI GGCC 6 cut(s) 602, 1242, 1532, 1827, 2103, 2481
BshVI ATCGAT 3 cut(s) 80, 144, 387
BsiEI CGRYCG 2 cut(s) 144, 148
BsiSI CCGG 2 cut(s) 58, 154
BslFI GGGAC 3 cut(s) 966, 1553, 1664
BsmAI GTCTC 7 cut(s) 496, 857, 916, 2059, 2103, 2497, 2536
BsmFI GGGAC 3 cut(s) 966, 1553, 1664
BsmI GAATGC 2 cut(s) 919, 1210
BsnI GGCC 6 cut(s) 602, 1242, 1532, 1827, 2103, 2481
Bso31I GGTCTC 2 cut(s) 496, 2059
Bsp119I TTCGAA 1 cut(s) 177
Bsp1286I GDGCHC 1 cut(s) 2440
Bsp13I TCCGGA 1 cut(s) 57
Bsp143I GATC 9 cut(s) 67, 141, 145, 285, 465, 514, 1378, 1676, 2275
Bsp19I CCATGG 1 cut(s) 2149
BspACI CCGC 3 cut(s) 376, 1208, 1586
BspANI GGCC 6 cut(s) 602, 1242, 1532, 1827, 2103, 2481
BspCNI CTCAG 5 cut(s) 121, 160, 871, 1069, 1516
BspDI ATCGAT 3 cut(s) 80, 144, 387
BspEI TCCGGA 1 cut(s) 57
BspLI GGNNCC 4 cut(s) 467, 954, 1036, 1474
BspOI GCTAGC 1 cut(s) 1551
BspPI GGATC 4 cut(s) 75, 460, 473, 509
BspT104I TTCGAA 1 cut(s) 177
BspTNI GGTCTC 2 cut(s) 496, 2059
BsrDI GCAATG 2 cut(s) 728, 1772
BsrI ACTGG 4 cut(s) 802, 2092, 2117, 2416
BssECI CCNNGG 8 cut(s) 207, 208, 461, 853, 956, 1912, 2021, 2149
BssMI GATC 9 cut(s) 67, 141, 145, 285, 465, 514, 1378, 1676, 2275
BssT1I CCWWGG 4 cut(s) 461, 956, 2021, 2149
Bst2UI CCWGG 6 cut(s) 209, 855, 1914, 1927, 2008, 2269
Bst4CI ACNGT 5 cut(s) 672, 1171, 1655, 1939, 2282
Bst6I CTCTTC 1 cut(s) 1114
BstBI TTCGAA 1 cut(s) 177
BstC8I GCNNGC 4 cut(s) 1086, 1549, 1919, 1951
BstDEI CTNAG 9 cut(s) 108, 168, 338, 620, 879, 1077, 1425, 1524, 2105
BstDSI CCRYGG 1 cut(s) 2149
BstENI CCTNNNNNAGG 1 cut(s) 1228
BstF5I GGATG 7 cut(s) 66, 85, 787, 966, 1935, 2031, 2247
BstKTI GATC 9 cut(s) 70, 144, 148, 288, 468, 517, 1381, 1679, 2278
BstMAI GTCTC 7 cut(s) 496, 857, 916, 2059, 2103, 2497, 2536
BstMBI GATC 9 cut(s) 67, 141, 145, 285, 465, 514, 1378, 1676, 2275
BstMCI CGRYCG 2 cut(s) 144, 148
BstNI CCWGG 6 cut(s) 209, 855, 1914, 1927, 2008, 2269
BstSCI CCNGG 6 cut(s) 207, 853, 1912, 1925, 2006, 2267
BstV1I GCAGC 5 cut(s) 888, 1131, 1198, 1511, 2317
BstV2I GAAGAC 4 cut(s) 198, 951, 1172, 1313
BstX2I RGATCY 3 cut(s) 67, 465, 1676
BstYI RGATCY 3 cut(s) 67, 465, 1676
Bsu15I ATCGAT 3 cut(s) 80, 144, 387
Bsu36I CCTNAGG 1 cut(s) 1524
BsuI GTATCC 1 cut(s) 2398
BsuRI GGCC 6 cut(s) 602, 1242, 1532, 1827, 2103, 2481
BsuTUI ATCGAT 3 cut(s) 80, 144, 387
BtgI CCRYGG 1 cut(s) 2149
BtsCI GGATG 7 cut(s) 66, 85, 787, 966, 1935, 2031, 2247
BtsI GCAGTG 1 cut(s) 1036
BtsIMutI CAGTG 3 cut(s) 1036, 2085, 2278
Cac8I GCNNGC 4 cut(s) 1086, 1549, 1919, 1951
Cfr13I GGNCC 5 cut(s) 458, 953, 1241, 1421, 2078
ClaI ATCGAT 3 cut(s) 80, 144, 387
CsiI ACCWGGT 2 cut(s) 2006, 2267
Csp6I GTAC 1 cut(s) 126
CspCI CAANNNNNGTGG 2 cut(s) 2336, 2371
CviQI GTAC 1 cut(s) 126
DdeI CTNAG 9 cut(s) 108, 168, 338, 620, 879, 1077, 1425, 1524, 2105
DpnI GATC 9 cut(s) 69, 143, 147, 287, 467, 516, 1380, 1678, 2277
DpnII GATC 9 cut(s) 67, 141, 145, 285, 465, 514, 1378, 1676, 2275
EaeI YGGCCR 2 cut(s) 600, 2479
Eam1104I CTCTTC 1 cut(s) 1114
EarI CTCTTC 1 cut(s) 1114
Eco130I CCWWGG 4 cut(s) 461, 956, 2021, 2149
Eco24I GRGCYC 1 cut(s) 2440
Eco31I GGTCTC 2 cut(s) 496, 2059
Eco47I GGWCC 4 cut(s) 458, 953, 1421, 2078
Eco57I CTGAAG 3 cut(s) 1325, 1367, 1830
Eco81I CCTNAGG 1 cut(s) 1524
EcoNI CCTNNNNNAGG 1 cut(s) 1228
EcoO109I RGGNCCY 2 cut(s) 458, 953
EcoRI GAATTC 2 cut(s) 179, 2527
EcoRII CCWGG 6 cut(s) 207, 853, 1912, 1925, 2006, 2267
EcoT14I CCWWGG 4 cut(s) 461, 956, 2021, 2149
EcoT22I ATGCAT 1 cut(s) 2493
EcoT38I GRGCYC 1 cut(s) 2440
ErhI CCWWGG 4 cut(s) 461, 956, 2021, 2149
FalI AAGNNNNNCTT 2 cut(s) 1442, 1474
FaqI GGGAC 3 cut(s) 966, 1553, 1664
FauNDI CATATG 1 cut(s) 766
FbaI TGATCA 1 cut(s) 2275
Fnu4HI GCNGC 7 cut(s) 377, 902, 1120, 1209, 1212, 1500, 2331
FokI GGATG 7 cut(s) 72, 73, 794, 973, 1942, 2038, 2234
FriOI GRGCYC 1 cut(s) 2440
Fsp4HI GCNGC 7 cut(s) 377, 902, 1120, 1209, 1212, 1500, 2331
FspBI CTAG 8 cut(s) 663, 1011, 1323, 1362, 1548, 1968, 2441, 2510
GluI GCNGC 7 cut(s) 377, 902, 1120, 1209, 1212, 1500, 2331
HaeIII GGCC 6 cut(s) 602, 1242, 1532, 1827, 2103, 2481
HapII CCGG 2 cut(s) 58, 154
HindIII AAGCTT 2 cut(s) 1147, 1755
HpaII CCGG 2 cut(s) 58, 154
HphI GGTGA 8 cut(s) 41, 84, 812, 869, 941, 1499, 2048, 2426
Hpy166II GTNNAC 3 cut(s) 640, 1733, 2320
Hpy188III TCNNGA 6 cut(s) 58, 71, 1038, 1323, 1523, 1562
Hpy8I GTNNAC 3 cut(s) 640, 1733, 2320
HpyAV CCTTC 7 cut(s) 99, 745, 1254, 1647, 1805, 1932, 2254
HpyCH4III ACNGT 5 cut(s) 672, 1171, 1655, 1939, 2282
HpyCH4IV ACGT 2 cut(s) 13, 705
HpyF3I CTNAG 9 cut(s) 108, 168, 338, 620, 879, 1077, 1425, 1524, 2105
HpySE526I ACGT 2 cut(s) 13, 705
Kpn2I TCCGGA 1 cut(s) 57
Ksp22I TGATCA 1 cut(s) 2275
Kzo9I GATC 9 cut(s) 67, 141, 145, 285, 465, 514, 1378, 1676, 2275
LmnI GCTCC 6 cut(s) 44, 203, 844, 922, 1007, 2169
Lsp1109I GCAGC 5 cut(s) 888, 1131, 1198, 1511, 2317
LweI GCATC 4 cut(s) 764, 772, 1920, 2016
MabI ACCWGGT 2 cut(s) 2006, 2267
MaeI CTAG 8 cut(s) 663, 1011, 1323, 1362, 1548, 1968, 2441, 2510
MaeII ACGT 2 cut(s) 13, 705
MaeIII GTNAC 5 cut(s) 29, 229, 929, 1833, 1903
MalI GATC 9 cut(s) 69, 143, 147, 287, 467, 516, 1380, 1678, 2277
MboI GATC 9 cut(s) 67, 141, 145, 285, 465, 514, 1378, 1676, 2275
MfeI CAATTG 1 cut(s) 1683
MflI RGATCY 3 cut(s) 67, 465, 1676
MhlI GDGCHC 1 cut(s) 2440
MlsI TGGCCA 2 cut(s) 602, 2481
MluNI TGGCCA 2 cut(s) 602, 2481
MlyI GAGTC 6 cut(s) 68, 1007, 1067, 1565, 1951, 2499
MmeI TCCRAC 4 cut(s) 66, 2175, 2275, 2415
Mox20I TGGCCA 2 cut(s) 602, 2481
Mph1103I ATGCAT 1 cut(s) 2493
MroI TCCGGA 1 cut(s) 57
MroXI GAANNNNTTC 1 cut(s) 1148
MscI TGGCCA 2 cut(s) 602, 2481
Msp20I TGGCCA 2 cut(s) 602, 2481
MspI CCGG 2 cut(s) 58, 154
MspR9I CCNGG 6 cut(s) 209, 855, 1914, 1927, 2008, 2269
MunI CAATTG 1 cut(s) 1683
Mva1269I GAATGC 2 cut(s) 919, 1210
MvaI CCWGG 6 cut(s) 209, 855, 1914, 1927, 2008, 2269
NcoI CCATGG 1 cut(s) 2149
NdeI CATATG 1 cut(s) 766
NdeII GATC 9 cut(s) 67, 141, 145, 285, 465, 514, 1378, 1676, 2275
NheI GCTAGC 1 cut(s) 1547
NlaIV GGNNCC 4 cut(s) 467, 954, 1036, 1474
NmuCI GTSAC 2 cut(s) 29, 929
NsiI ATGCAT 1 cut(s) 2493
NspV TTCGAA 1 cut(s) 177
PasI CCCWGGG 1 cut(s) 208
PctI GAATGC 2 cut(s) 919, 1210
PdmI GAANNNNTTC 1 cut(s) 1148
PfeI GAWTC 6 cut(s) 82, 724, 1326, 1790, 2145, 2181
PflMI CCANNNNNTGG 1 cut(s) 2397
PfoI TCCNGGA 1 cut(s) 1925
PkrI GCNGC 7 cut(s) 378, 903, 1121, 1210, 1213, 1501, 2332
Ple19I CGATCG 2 cut(s) 144, 148
PleI GAGTC 6 cut(s) 68, 1006, 1067, 1565, 1951, 2499
PpsI GAGTC 6 cut(s) 68, 1006, 1067, 1565, 1951, 2499
PpuMI RGGWCCY 2 cut(s) 458, 953
PshBI ATTAAT 1 cut(s) 2118
Psp5II RGGWCCY 2 cut(s) 458, 953
Psp6I CCWGG 6 cut(s) 207, 853, 1912, 1925, 2006, 2267
PspGI CCWGG 6 cut(s) 207, 853, 1912, 1925, 2006, 2267
PspN4I GGNNCC 4 cut(s) 467, 954, 1036, 1474
PspPI GGNCC 5 cut(s) 458, 953, 1241, 1421, 2078
PspPPI RGGWCCY 2 cut(s) 458, 953
PsuI RGATCY 3 cut(s) 67, 465, 1676
PvuI CGATCG 2 cut(s) 144, 148
RsaI GTAC 1 cut(s) 127
RsaNI GTAC 1 cut(s) 126
SatI GCNGC 7 cut(s) 377, 902, 1120, 1209, 1212, 1500, 2331
Sau3AI GATC 9 cut(s) 67, 141, 145, 285, 465, 514, 1378, 1676, 2275
Sau96I GGNCC 5 cut(s) 458, 953, 1241, 1421, 2078
SchI GAGTC 6 cut(s) 68, 1007, 1067, 1565, 1951, 2499
ScrFI CCNGG 6 cut(s) 209, 855, 1914, 1927, 2008, 2269
SduI GDGCHC 1 cut(s) 2440
SexAI ACCWGGT 2 cut(s) 2006, 2267
SfaNI GCATC 4 cut(s) 764, 772, 1920, 2016
SfuI TTCGAA 1 cut(s) 177
SinI GGWCC 4 cut(s) 458, 953, 1421, 2078
SsiI CCGC 3 cut(s) 376, 1208, 1586
SspI AATATT 1 cut(s) 2215
SspMI CTAG 8 cut(s) 663, 1011, 1323, 1362, 1548, 1968, 2441, 2510
StyD4I CCNGG 6 cut(s) 207, 853, 1912, 1925, 2006, 2267
StyI CCWWGG 4 cut(s) 461, 956, 2021, 2149
TaaI ACNGT 5 cut(s) 672, 1171, 1655, 1939, 2282
TaiI ACGT 2 cut(s) 16, 708
TaqI TCGA 4 cut(s) 80, 144, 177, 387
TauI GCSGC 2 cut(s) 379, 1211
TfiI GAWTC 6 cut(s) 82, 724, 1326, 1790, 2145, 2181
TscAI CASTG 3 cut(s) 1036, 2092, 2285
TseFI GTSAC 2 cut(s) 29, 929
TseI GCWGC 5 cut(s) 901, 1119, 1211, 1499, 2330
Tsp45I GTSAC 2 cut(s) 29, 929
TspRI CASTG 3 cut(s) 1036, 2092, 2285
Van91I CCANNNNNTGG 1 cut(s) 2397
VpaK11BI GGWCC 4 cut(s) 458, 953, 1421, 2078
VspI ATTAAT 1 cut(s) 2118
XagI CCTNNNNNAGG 1 cut(s) 1228
XapI RAATTY 7 cut(s) 179, 558, 578, 1357, 1701, 1879, 2527
XbaI TCTAGA 1 cut(s) 1322
XcmI CCANNNNNNNNNTGG 1 cut(s) 1540
XmnI GAANNNNTTC 1 cut(s) 1148
XspI CTAG 8 cut(s) 663, 1011, 1323, 1362, 1548, 1968, 2441, 2510
Zsp2I ATGCAT 1 cut(s) 2493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.