Rroxscaffold_2G00118640

Protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000074
Physical Location & Seq
Forward (+)
50189880 .. 50198177
8298 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00118640.1

Sequence Viewer

Length: 1572 bp
ATGGTGACAATGAATGGGCTTCAAGGCAACAAATGGGTTGCTGCAATGTACAACAAGAGGGAGAGGTGGGCAGAAGCTTTCTTTAGGAACCATTTCTTCGGTGGTATGTGTACCACTCAAAGATGCGAGGCAATGCATAGAAATTTAAAAGGTGGGGTTGGTCGTTACATGAGGTTGTGTGAAGTGTTGCCACGCATGGACAAGACAATTGAACGCATCAGGTTTAATGGGCTTAACGATGACTTCAAATCAATGAACTCGCACCCGGTTATTGGCAGCCACATGCGGTGCATTCAACAGCAGGTTAGTGTAAGGTTTACCCACGACGTATTCCTCCTCATAAAAGATCAAATTCTTTTTGAGTCAAAGTTTCTCGTTGCTGACCGTGTTTGTTATGAGAATCAAGGATCAACACTTCATCTTGTAACCCAATACGGTAAACCTGAAAGGACATGGCATGTGACACATTATCAAGGTAAGCCCGACCTTTCTTTCGTATGCTCATGTCACCTCTTTGAGTCGGATGGTATTCCTTGCTGCCACATCTTCACAGTCATGAAGACAATGAATATGACTACCCTTCCAGAATCTTTGGTTAAACAGAGGTGGACAAAACAGGCTTGTACCAAAAATACTAGCACCCTCGCTAGTGGAATAATGCCCGCCAAGGATTTGCAGCTTGCCCGTTATGGGCAAATGATGGGTGATTGTGCTCAAATCTGTCATTCAGCTTCATTCTCAGATGAGGCATATGAAGAAATTACTAACTGTCTTAGTCGACTAATGGTTAGGTCCAAAACATTCAAAAGATGCAAAGATAGTCAGCCAGCAGAAACTGTTGATGGTCTACACCCTAATGTGATTAGGGATCCGAACGTGTGCAAAACCAAGGGCACACATTCCAGGCATTCCACCAGTGTTGAGGTTGAGAGAGATCAGCCAGGAGGGAGGGGATGTGGATTTTGCAGCCGGCCAGGTCATAATGTACGCACTTGTGCACTGCTAGCTGCACAAAATGGGGGGGAAAAGGATGAACCTCGTCTCCAAAGAGCACGGAACAGCTTCATGGATGCTAGCTTGGAGTCTATTCCGGGTTCCAATAGATACAGGGGTCCAGCTGGTTTCACAAACATTGGTCAGACTGATGAGGATGATGCTTTCCTCAATCAAACTAGCAGTCAACATATGTTGCATCATGTTGAAGAATCTAGGACGTTTGATTTTTTTACTGGTCACGACACCTTTTTGGCTTCCTTGAGTGCTCCATCTGCAAATCTAAATGGTGGAAACACATTCGTGCAGCCTTTACTGAGCATCAATTGCAGTAGTGCGAAACTTTGTAGTCAGAAAAGCATGAGGTTTGCACAGTTGGGTGACTACAAAATTACCGTCATTCTTGCAACTTCCTCACGGAATGAAGTCCTATCATCATCAGGTGCACTGTCAACGATTTCCCCAAATCTGGAGTCTTTGTGCACCACCAACAAATACCAATGCCCCTCAGATGCAGGATCGCGCAGAGGAATGTATATCTACATAGAAGACACAATTTCAGCTTCTGGGATTGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

523

Amino Acids

58.54

Weight (kDa)

8.56

Isoelectric Point (pI)

43.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 292
AccI GTMKAC 2 cut(s) 778, 847
AccII CGCG 1 cut(s) 1516
AciI CCGC 2 cut(s) 286, 663
AclWI GGATC 4 cut(s) 415, 863, 876, 1519
AcoI YGGCCR 1 cut(s) 971
AcsI RAATTY 2 cut(s) 142, 351
AfaI GTAC 4 cut(s) 50, 112, 625, 987
AfiI CCNNNNNNNGG 3 cut(s) 272, 690, 1462
AflIII ACRYGT 1 cut(s) 876
AgsI TTSAA 7 cut(s) 23, 212, 247, 296, 805, 1202, 1568
AjnI CCWGG 3 cut(s) 902, 940, 973
AleI CACNNNNGTG 1 cut(s) 1295
AloI GAACNNNNNNTCC 2 cut(s) 1026, 1058
AluBI AGCT 8 cut(s) 77, 679, 731, 1007, 1062, 1077, 1118, 1556
AluI AGCT 8 cut(s) 77, 679, 731, 1007, 1062, 1077, 1118, 1556
Alw21I GWGCWC 6 cut(s) 715, 1000, 1054, 1264, 1441, 1478
Alw26I GTCTC 1 cut(s) 1046
Alw44I GTGCAC 3 cut(s) 996, 1437, 1474
AlwI GGATC 4 cut(s) 415, 863, 876, 1519
AlwNI CAGNNNCTG 2 cut(s) 836, 1559
AoxI GGCC 1 cut(s) 971
ApaLI GTGCAC 3 cut(s) 996, 1437, 1474
ApeKI GCWGC 7 cut(s) 41, 276, 537, 676, 966, 1007, 1300
ApoI RAATTY 2 cut(s) 142, 351
ArsI GACNNNNNNTTYG 8 cut(s) 476, 508, 1162, 1194, 1374, 1406, 1451, 1483
Asp700I GAANNNNTTC 2 cut(s) 92, 1061
AspLEI GCGC 1 cut(s) 1518
AspS9I GGNCC 2 cut(s) 792, 1112
AsuC2I CCSGG 2 cut(s) 266, 1092
AsuHPI GGTGA 4 cut(s) 16, 500, 716, 1385
AsuNHI GCTAGC 2 cut(s) 1003, 1073
AvaII GGWCC 2 cut(s) 792, 1112
BaeGI GKGCMC 4 cut(s) 896, 1000, 1441, 1478
BaeI ACNNNNGTAYC 2 cut(s) 1096, 1129
BamHI GGATCC 1 cut(s) 868
BbsI GAAGAC 2 cut(s) 566, 1548
Bbv12I GWGCWC 6 cut(s) 715, 1000, 1054, 1264, 1441, 1478
BbvI GCAGC 7 cut(s) 28, 288, 524, 688, 978, 994, 1312
BccI CCATC 4 cut(s) 518, 694, 836, 1273
BciT130I CCWGG 3 cut(s) 904, 942, 975
BcnI CCSGG 2 cut(s) 266, 1092
BcoDI GTCTC 1 cut(s) 1046
BfaI CTAG 6 cut(s) 636, 648, 1004, 1074, 1173, 1209
BfuAI ACCTGC 1 cut(s) 292
BisI GCNGC 7 cut(s) 42, 277, 538, 677, 967, 1008, 1301
BlsI GCNGC 7 cut(s) 43, 278, 539, 678, 968, 1009, 1302
Bme1390I CCNGG 5 cut(s) 266, 904, 942, 975, 1092
Bme18I GGWCC 2 cut(s) 792, 1112
BmgT120I GGNCC 2 cut(s) 792, 1112
BmiI GGNNCC 4 cut(s) 89, 870, 1096, 1113
BmrFI CCNGG 5 cut(s) 266, 904, 942, 975, 1092
BmsI GCATC 8 cut(s) 113, 225, 800, 1060, 1144, 1201, 1323, 1495
BmtI GCTAGC 2 cut(s) 1007, 1077
BpiI GAAGAC 2 cut(s) 566, 1548
BpmI CTGGAG 1 cut(s) 1484
BpuEI CTTGAG 1 cut(s) 1276
BpuMI CCSGG 2 cut(s) 266, 1092
BsaJI CCNNGG 2 cut(s) 666, 888
BsaXI ACNNNNNCTCC 6 cut(s) 940, 970, 1026, 1056, 1457, 1487
Bsc4I CCNNNNNNNGG 3 cut(s) 272, 690, 1462
Bse118I RCCGGY 1 cut(s) 969
Bse1I ACTGG 2 cut(s) 915, 1234
Bse3DI GCAATG 2 cut(s) 51, 138
BseBI CCWGG 3 cut(s) 904, 942, 975
BseDI CCNNGG 2 cut(s) 666, 888
BseGI GGATG 5 cut(s) 529, 959, 1036, 1075, 1156
BseLI CCNNNNNNNGG 3 cut(s) 272, 690, 1462
BseMI GCAATG 2 cut(s) 51, 138
BseMII CTCAG 3 cut(s) 753, 1301, 1515
BseNI ACTGG 2 cut(s) 915, 1234
BseRI GAGGAG 1 cut(s) 326
BseSI GKGCMC 4 cut(s) 896, 1000, 1441, 1478
BseXI GCAGC 7 cut(s) 28, 288, 524, 688, 978, 994, 1312
BsgI GTGCAG 2 cut(s) 993, 1319
Bsh1236I CGCG 1 cut(s) 1516
BshFI GGCC 1 cut(s) 973
BsiHKAI GWGCWC 6 cut(s) 715, 1000, 1054, 1264, 1441, 1478
BsiSI CCGG 3 cut(s) 266, 970, 1091
BslI CCNNNNNNNGG 3 cut(s) 272, 690, 1462
BsmAI GTCTC 1 cut(s) 1046
BsmBI CGTCTC 1 cut(s) 1046
BsmI GAATGC 2 cut(s) 291, 907
BsnI GGCC 1 cut(s) 973
Bsp1286I GDGCHC 7 cut(s) 715, 896, 1000, 1054, 1264, 1441, 1478
Bsp1407I TGTACA 1 cut(s) 48
Bsp143I GATC 5 cut(s) 346, 407, 868, 934, 1511
BspACI CCGC 2 cut(s) 286, 663
BspANI GGCC 1 cut(s) 973
BspCNI CTCAG 3 cut(s) 752, 1302, 1514
BspFNI CGCG 1 cut(s) 1516
BspHI TCATGA 1 cut(s) 555
BspLI GGNNCC 4 cut(s) 89, 870, 1096, 1113
BspMI ACCTGC 1 cut(s) 292
BspOI GCTAGC 2 cut(s) 1007, 1077
BspPI GGATC 4 cut(s) 415, 863, 876, 1519
BsrDI GCAATG 2 cut(s) 51, 138
BsrFI RCCGGY 1 cut(s) 969
BsrGI TGTACA 1 cut(s) 48
BsrI ACTGG 2 cut(s) 915, 1234
BssAI RCCGGY 1 cut(s) 969
BssECI CCNNGG 2 cut(s) 666, 888
BssMI GATC 5 cut(s) 346, 407, 868, 934, 1511
BssT1I CCWWGG 2 cut(s) 666, 888
Bst2UI CCWGG 3 cut(s) 904, 942, 975
Bst4CI ACNGT 8 cut(s) 386, 437, 553, 770, 838, 1368, 1390, 1443
BstAPI GCANNNNNTGC 1 cut(s) 1320
BstAUI TGTACA 1 cut(s) 48
BstC8I GCNNGC 6 cut(s) 663, 681, 828, 971, 1005, 1075
BstDEI CTNAG 4 cut(s) 739, 773, 1310, 1501
BstF5I GGATG 5 cut(s) 529, 959, 1036, 1075, 1156
BstFNI CGCG 1 cut(s) 1516
BstHHI GCGC 1 cut(s) 1518
BstKTI GATC 5 cut(s) 349, 410, 871, 937, 1514
BstMAI GTCTC 1 cut(s) 1046
BstMBI GATC 5 cut(s) 346, 407, 868, 934, 1511
BstMWI GCNNNNNNNGC 3 cut(s) 1004, 1268, 1320
BstNI CCWGG 3 cut(s) 904, 942, 975
BstNSI RCATGY 2 cut(s) 286, 461
BstSCI CCNGG 5 cut(s) 264, 902, 940, 973, 1090
BstSLI GKGCMC 4 cut(s) 896, 1000, 1441, 1478
BstUI CGCG 1 cut(s) 1516
BstV1I GCAGC 7 cut(s) 28, 288, 524, 688, 978, 994, 1312
BstV2I GAAGAC 2 cut(s) 566, 1548
BstX2I RGATCY 1 cut(s) 868
BstYI RGATCY 1 cut(s) 868
BsuRI GGCC 1 cut(s) 973
BtsCI GGATG 5 cut(s) 529, 959, 1036, 1075, 1156
BtsI GCAGTG 1 cut(s) 998
BtsIMutI CAGTG 3 cut(s) 922, 998, 1439
BveI ACCTGC 1 cut(s) 292
Cac8I GCNNGC 6 cut(s) 663, 681, 828, 971, 1005, 1075
CaiI CAGNNNCTG 2 cut(s) 836, 1559
CciI TCATGA 1 cut(s) 555
CfoI GCGC 1 cut(s) 1518
Cfr10I RCCGGY 1 cut(s) 969
Cfr13I GGNCC 2 cut(s) 792, 1112
Csp6I GTAC 4 cut(s) 49, 111, 624, 986
CspCI CAANNNNNGTGG 2 cut(s) 901, 936
CviQI GTAC 4 cut(s) 49, 111, 624, 986
DdeI CTNAG 4 cut(s) 739, 773, 1310, 1501
DpnI GATC 5 cut(s) 348, 409, 870, 936, 1513
DpnII GATC 5 cut(s) 346, 407, 868, 934, 1511
DraI TTTAAA 1 cut(s) 147
EaeI YGGCCR 1 cut(s) 971
Eco130I CCWWGG 2 cut(s) 666, 888
Eco47I GGWCC 2 cut(s) 792, 1112
EcoRII CCWGG 3 cut(s) 902, 940, 973
EcoT14I CCWWGG 2 cut(s) 666, 888
EcoT22I ATGCAT 1 cut(s) 138
ErhI CCWWGG 2 cut(s) 666, 888
Esp3I CGTCTC 1 cut(s) 1046
FauI CCCGC 1 cut(s) 670
FauNDI CATATG 2 cut(s) 751, 1185
FblI GTMKAC 2 cut(s) 778, 847
Fnu4HI GCNGC 7 cut(s) 42, 277, 538, 677, 967, 1008, 1301
FokI GGATG 5 cut(s) 536, 966, 1043, 1082, 1163
Fsp4HI GCNGC 7 cut(s) 42, 277, 538, 677, 967, 1008, 1301
FspBI CTAG 6 cut(s) 636, 648, 1004, 1074, 1173, 1209
GlaI GCGC 1 cut(s) 1517
GluI GCNGC 7 cut(s) 42, 277, 538, 677, 967, 1008, 1301
GsuI CTGGAG 1 cut(s) 1484
HaeIII GGCC 1 cut(s) 973
HapII CCGG 3 cut(s) 266, 970, 1091
HhaI GCGC 1 cut(s) 1518
Hin6I GCGC 1 cut(s) 1516
HinP1I GCGC 1 cut(s) 1516
HincII GTYRAC 3 cut(s) 779, 1181, 1446
HindII GTYRAC 3 cut(s) 779, 1181, 1446
HindIII AAGCTT 1 cut(s) 75
HinfI GANTC 7 cut(s) 362, 400, 518, 587, 1082, 1205, 1466
HpaII CCGG 3 cut(s) 266, 970, 1091
HphI GGTGA 4 cut(s) 16, 500, 716, 1385
Hpy188I TCNGA 6 cut(s) 523, 742, 873, 1140, 1347, 1504
Hpy188III TCNNGA 4 cut(s) 556, 584, 1235, 1463
Hpy99I CGWCG 1 cut(s) 329
HpyAV CCTTC 1 cut(s) 590
HpyCH4III ACNGT 8 cut(s) 386, 437, 553, 770, 838, 1368, 1390, 1443
HpyCH4IV ACGT 3 cut(s) 327, 876, 1214
HpyF10VI GCNNNNNNNGC 3 cut(s) 1004, 1268, 1320
HpyF3I CTNAG 4 cut(s) 739, 773, 1310, 1501
HpySE526I ACGT 3 cut(s) 327, 876, 1214
HspAI GCGC 1 cut(s) 1516
KroI GCCGGC 1 cut(s) 969
KroNI GCCGGC 1 cut(s) 971
Kzo9I GATC 5 cut(s) 346, 407, 868, 934, 1511
LmnI GCTCC 1 cut(s) 1267
Lsp1109I GCAGC 7 cut(s) 28, 288, 524, 688, 978, 994, 1312
LweI GCATC 8 cut(s) 113, 225, 800, 1060, 1144, 1201, 1323, 1495
MaeI CTAG 6 cut(s) 636, 648, 1004, 1074, 1173, 1209
MaeII ACGT 3 cut(s) 327, 876, 1214
MaeIII GTNAC 7 cut(s) 4, 164, 424, 460, 506, 1232, 1373
MalI GATC 5 cut(s) 348, 409, 870, 936, 1513
MboI GATC 5 cut(s) 346, 407, 868, 934, 1511
MboII GAAGA 6 cut(s) 88, 538, 571, 767, 1214, 1553
MfeI CAATTG 2 cut(s) 207, 1318
MflI RGATCY 1 cut(s) 868
MhlI GDGCHC 7 cut(s) 715, 896, 1000, 1054, 1264, 1441, 1478
MluCI AATT 7 cut(s) 142, 207, 351, 759, 1318, 1383, 1548
MlyI GAGTC 4 cut(s) 371, 527, 1091, 1475
MmeI TCCRAC 1 cut(s) 501
Mph1103I ATGCAT 1 cut(s) 138
MroNI GCCGGC 1 cut(s) 969
MroXI GAANNNNTTC 2 cut(s) 92, 1061
MseI TTAA 4 cut(s) 146, 225, 234, 597
MslI CAYNNNNRTG 3 cut(s) 554, 855, 1295
MspA1I CMGCKG 1 cut(s) 1118
MspI CCGG 3 cut(s) 266, 970, 1091
MspR9I CCNGG 5 cut(s) 266, 904, 942, 975, 1092
MunI CAATTG 2 cut(s) 207, 1318
Mva1269I GAATGC 2 cut(s) 291, 907
MvaI CCWGG 3 cut(s) 904, 942, 975
MvnI CGCG 1 cut(s) 1516
MwoI GCNNNNNNNGC 3 cut(s) 1004, 1268, 1320
NaeI GCCGGC 1 cut(s) 971
NciI CCSGG 2 cut(s) 266, 1092
NdeI CATATG 2 cut(s) 751, 1185
NdeII GATC 5 cut(s) 346, 407, 868, 934, 1511
NgoMIV GCCGGC 1 cut(s) 969
NheI GCTAGC 2 cut(s) 1003, 1073
NlaIV GGNNCC 4 cut(s) 89, 870, 1096, 1113
NmuCI GTSAC 5 cut(s) 4, 460, 506, 1232, 1373
NsiI ATGCAT 1 cut(s) 138
NspI RCATGY 2 cut(s) 286, 461
OliI CACNNNNGTG 1 cut(s) 1295
PagI TCATGA 1 cut(s) 555
PctI GAATGC 2 cut(s) 291, 907
PdiI GCCGGC 1 cut(s) 971
PdmI GAANNNNTTC 2 cut(s) 92, 1061
PfeI GAWTC 3 cut(s) 400, 587, 1205
PkrI GCNGC 7 cut(s) 43, 278, 539, 678, 968, 1009, 1302
PleI GAGTC 4 cut(s) 370, 526, 1090, 1474
PpsI GAGTC 4 cut(s) 370, 526, 1090, 1474
Psp6I CCWGG 3 cut(s) 902, 940, 973
PspGI CCWGG 3 cut(s) 902, 940, 973
PspN4I GGNNCC 4 cut(s) 89, 870, 1096, 1113
PspPI GGNCC 2 cut(s) 792, 1112
PstNI CAGNNNCTG 2 cut(s) 836, 1559
PsuI RGATCY 1 cut(s) 868
PvuII CAGCTG 1 cut(s) 1118
RsaI GTAC 4 cut(s) 50, 112, 625, 987
RsaNI GTAC 4 cut(s) 49, 111, 624, 986
RseI CAYNNNNRTG 3 cut(s) 554, 855, 1295
SalI GTCGAC 1 cut(s) 777
SaqAI TTAA 4 cut(s) 146, 225, 234, 597
SatI GCNGC 7 cut(s) 42, 277, 538, 677, 967, 1008, 1301
Sau3AI GATC 5 cut(s) 346, 407, 868, 934, 1511
Sau96I GGNCC 2 cut(s) 792, 1112
SchI GAGTC 4 cut(s) 371, 527, 1091, 1475
ScrFI CCNGG 5 cut(s) 266, 904, 942, 975, 1092
SduI GDGCHC 7 cut(s) 715, 896, 1000, 1054, 1264, 1441, 1478
SfaNI GCATC 8 cut(s) 113, 225, 800, 1060, 1144, 1201, 1323, 1495
SinI GGWCC 2 cut(s) 792, 1112
SmiMI CAYNNNNRTG 3 cut(s) 554, 855, 1295
SmlI CTYRAG 1 cut(s) 1255
SmoI CTYRAG 1 cut(s) 1255
Sse9I AATT 7 cut(s) 142, 207, 351, 759, 1318, 1383, 1548
SsiI CCGC 2 cut(s) 286, 663
SspMI CTAG 6 cut(s) 636, 648, 1004, 1074, 1173, 1209
StyD4I CCNGG 5 cut(s) 264, 902, 940, 973, 1090
StyI CCWWGG 2 cut(s) 666, 888
TaaI ACNGT 8 cut(s) 386, 437, 553, 770, 838, 1368, 1390, 1443
TaiI ACGT 3 cut(s) 330, 879, 1217
TaqI TCGA 1 cut(s) 778
TasI AATT 7 cut(s) 142, 207, 351, 759, 1318, 1383, 1548
TatI WGTACW 1 cut(s) 48
TfiI GAWTC 3 cut(s) 400, 587, 1205
Tru1I TTAA 4 cut(s) 146, 225, 234, 597
Tru9I TTAA 4 cut(s) 146, 225, 234, 597
TscAI CASTG 3 cut(s) 922, 1005, 1446
TseFI GTSAC 5 cut(s) 4, 460, 506, 1232, 1373
TseI GCWGC 7 cut(s) 41, 276, 537, 676, 966, 1007, 1300
Tsp45I GTSAC 5 cut(s) 4, 460, 506, 1232, 1373
TspGWI ACGGA 2 cut(s) 1069, 1426
TspRI CASTG 3 cut(s) 922, 1005, 1446
VneI GTGCAC 3 cut(s) 996, 1437, 1474
VpaK11BI GGWCC 2 cut(s) 792, 1112
XapI RAATTY 2 cut(s) 142, 351
XceI RCATGY 2 cut(s) 286, 461
XcmI CCANNNNNNNNNTGG 1 cut(s) 98
XmiI GTMKAC 2 cut(s) 778, 847
XmnI GAANNNNTTC 2 cut(s) 92, 1061
XspI CTAG 6 cut(s) 636, 648, 1004, 1074, 1173, 1209
Zsp2I ATGCAT 1 cut(s) 138
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.