Rw0G002270

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00072
OG0000074
Physical Location & Seq
Forward (+)
142446 .. 144923
2478 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G002270.1

Sequence Viewer

Length: 1551 bp
ATGTCAATTCGGTTTGGTAAATGCACAGAGGTAACTACGCGTTTAAAGGAGGCAACGGGGAGTGGAAAACCGGCTGAATCAACAGAACTGAGGAAATCACCTGGAATAGCACAAGAGGACAAAACATTACCTGATGTTGGTATTGAAAGGCCTGAATTTGTGAAACATACGGGGGCTGCACAATTTAATGATAAGCATTTTGAAGACCTTACAATGGACGATATGAAGGCAGTATACTTCCCAACCGTACAGGAAGCAGAGAAGTTCTTGTCATTGTATTCACGAATGCTTGGTTTCAGCATACGGAGGGATAGGTTGCAGAAGGAAGGCAATGACATGGTGGTTGAGTGCCTTCGTCGCGCACAAGTCCACACTAGTAGGGCTTATGAGCATCTAGTAGAGCAAGCTGGGGGACACGACGGTGTCGGCTTCATCATAAAAGATCTGTACAACAAGATTGCTAAGAAGAGGAGAAATGATGAGCTGGATGGGGATGCACGGGCCGCATTGACTTGGATGAACATGAGGGGAATGGAGTCACAACAGTTCTGCTGCAAGTACACGAATAGGAGGCTGCTTGGCACTCAATGGTGGTCAGAAATGGGTTGTCGGACAATGCATGGGTTACAAGCTTGTACAACAAACGGGATAGGTGGGCGGAAGCATTCTTCAGAGGGCACTTTTTTTGGAGGAATGTGCAGTACCCAACGTGTGGAAGGCATGCACGCAAAGCTGAAAAAAGAGATTGGGAGGCACACTAGACTATGTGAAGTTATGCCAAGAATGGAGAAGACACTTAGGCGTATGCGGAACCGAGTATTGTATGACAACTTCAGGTCCAAAAATAGTGTACCGGTTTATGAGACGCACATGAGGGGGATCGAGGAAGATGCATGTAGGCTGTTCACGGATGACATCTTCATTATGATAAAGTCACAAATCATGTTCGAGAGGAGTCACATTTTCTGTGTAATGAAAGATCAGCTTCTGTCCAGATATCCCAAGAGTTTGATAAGCAAACAGTGGACAAAGGCTGTGGTTGATTCAACAGTTGCACCAAAACTGAAGGTCCCCGGTCATGACAAGTTAGCACAGGTGGCTAGGTATTCTGCCCTCATATCAGAAGCAGCCAAAGCATGCTTAAACTACTCATTTTCAGAAGAAGGATTCAAGGTGGGAATGAATGAATTTGCAAGGCTGGTTCAAACCTCAAGGGAATTCAACACAGTTCCTCCTACGAACACATCAAATGTGCCTCCGAGTAGCAATGTTGTGAAGGACCCAAAAGTATCACGGACGAAGGGGATGCCTTCTAATCCTGCAACAAACGCAGAGAATGGGAAGAGAGAGCAGCGGCTGTGCGGAAAATGTTTAATGCCCAGTCACAACAGGCACACTTGTACAGTTGGTGATGAAGAAGGGGTTCCCACTCGTGCCAATGCAGAAACAGCAGATTCAGAGACTCAGATGATACCTTCAGTCCCTTATCCTGCACATTCAGTACCTCATCCTCCTCTTAATTTATCTATCTATCAACCCATGGAAGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

516

Amino Acids

58.35

Weight (kDa)

9.14

Isoelectric Point (pI)

48.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 712
AccI GTMKAC 1 cut(s) 234
AccII CGCG 2 cut(s) 40, 360
AciI CCGC 5 cut(s) 504, 658, 808, 1354, 1362
AclWI GGATC 1 cut(s) 887
AcsI RAATTY 3 cut(s) 155, 1187, 1217
AcuI CTGAAG 4 cut(s) 654, 817, 1085, 1461
AfaI GTAC 8 cut(s) 249, 449, 560, 637, 703, 852, 1402, 1503
AfiI CCNNNNNNNGG 3 cut(s) 137, 214, 712
AflIII ACRYGT 2 cut(s) 38, 709
AgeI ACCGGT 1 cut(s) 853
AgsI TTSAA 6 cut(s) 146, 203, 1047, 1171, 1205, 1222
AhlI ACTAGT 1 cut(s) 374
AjnI CCWGG 1 cut(s) 100
AleI CACNNNNGTG 1 cut(s) 420
AluBI AGCT 5 cut(s) 407, 484, 632, 733, 985
AluI AGCT 5 cut(s) 407, 484, 632, 733, 985
Alw26I GTCTC 2 cut(s) 857, 1454
AlwI GGATC 1 cut(s) 887
AlwNI CAGNNNCTG 2 cut(s) 988, 1357
AoxI GGCC 2 cut(s) 149, 501
ApeKI GCWGC 5 cut(s) 176, 552, 574, 1127, 1351
ApoI RAATTY 3 cut(s) 155, 1187, 1217
AsiGI ACCGGT 1 cut(s) 853
Asp700I GAANNNNTTC 1 cut(s) 1422
AspLEI GCGC 1 cut(s) 362
AspS9I GGNCC 4 cut(s) 501, 837, 1069, 1279
AsuC2I CCSGG 1 cut(s) 1074
AsuHPI GGTGA 2 cut(s) 90, 1421
AvaII GGWCC 3 cut(s) 837, 1069, 1279
BaeGI GKGCMC 1 cut(s) 680
BarI GAAGNNNNNNTAC 4 cut(s) 218, 250, 815, 847
BauI CACGAG 1 cut(s) 1431
BbsI GAAGAC 2 cut(s) 210, 797
BbvI GCAGC 5 cut(s) 163, 539, 561, 1139, 1363
BccI CCATC 1 cut(s) 482
BcgI CGANNNNNNTGC 4 cut(s) 872, 906, 1288, 1322
BciT130I CCWGG 1 cut(s) 102
BcnI CCSGG 1 cut(s) 1074
BcoDI GTCTC 2 cut(s) 857, 1454
BcuI ACTAGT 1 cut(s) 374
BfaI CTAG 4 cut(s) 375, 395, 759, 1101
BglII AGATCT 1 cut(s) 442
BisI GCNGC 7 cut(s) 177, 504, 553, 575, 1128, 1352, 1355
BlsI GCNGC 7 cut(s) 178, 505, 554, 576, 1129, 1353, 1356
Bme1390I CCNGG 2 cut(s) 102, 1074
Bme18I GGWCC 3 cut(s) 837, 1069, 1279
BmgT120I GGNCC 4 cut(s) 501, 837, 1069, 1279
BmiI GGNNCC 4 cut(s) 812, 1071, 1281, 1425
BmrFI CCNGG 2 cut(s) 102, 1074
BmrI ACTGGG 1 cut(s) 1374
BmsI GCATC 4 cut(s) 400, 484, 880, 1296
BmuI ACTGGG 1 cut(s) 1374
BpiI GAAGAC 2 cut(s) 210, 797
BpuEI CTTGAG 1 cut(s) 1195
BpuMI CCSGG 1 cut(s) 1074
BsaJI CCNNGG 2 cut(s) 1072, 1539
BsaWI WCCGGW 1 cut(s) 853
BsaXI ACNNNNNCTCC 2 cut(s) 1216, 1246
Bsc4I CCNNNNNNNGG 3 cut(s) 137, 214, 712
Bse118I RCCGGY 2 cut(s) 70, 853
Bse1I ACTGG 1 cut(s) 1380
Bse3DI GCAATG 2 cut(s) 337, 1273
BseBI CCWGG 1 cut(s) 102
BseDI CCNNGG 2 cut(s) 1072, 1539
BseGI GGATG 6 cut(s) 493, 499, 522, 916, 1311, 1507
BseLI CCNNNNNNNGG 3 cut(s) 137, 214, 712
BseMI GCAATG 2 cut(s) 337, 1273
BseMII CTCAG 2 cut(s) 80, 1478
BseNI ACTGG 1 cut(s) 1380
BseRI GAGGAG 3 cut(s) 484, 967, 1503
BseSI GKGCMC 1 cut(s) 680
BseXI GCAGC 5 cut(s) 163, 539, 561, 1139, 1363
BseYI CCCAGC 1 cut(s) 407
BsgI GTGCAG 3 cut(s) 162, 718, 1476
Bsh1236I CGCG 2 cut(s) 40, 360
BshFI GGCC 2 cut(s) 151, 503
BshTI ACCGGT 1 cut(s) 853
BsiSI CCGG 3 cut(s) 71, 854, 1074
BslFI GGGAC 3 cut(s) 426, 1055, 1466
BslI CCNNNNNNNGG 3 cut(s) 137, 214, 712
BsmAI GTCTC 2 cut(s) 857, 1454
BsmBI CGTCTC 1 cut(s) 857
BsmFI GGGAC 3 cut(s) 426, 1055, 1466
BsmI GAATGC 2 cut(s) 291, 664
BsnI GGCC 2 cut(s) 151, 503
Bsp1286I GDGCHC 1 cut(s) 680
Bsp1407I TGTACA 3 cut(s) 447, 635, 1400
Bsp143I GATC 3 cut(s) 442, 879, 979
Bsp19I CCATGG 1 cut(s) 1539
BspACI CCGC 5 cut(s) 504, 658, 808, 1354, 1362
BspANI GGCC 2 cut(s) 151, 503
BspCNI CTCAG 2 cut(s) 81, 1477
BspFNI CGCG 2 cut(s) 40, 360
BspHI TCATGA 1 cut(s) 1078
BspLI GGNNCC 4 cut(s) 812, 1071, 1281, 1425
BspPI GGATC 1 cut(s) 887
BsrDI GCAATG 2 cut(s) 337, 1273
BsrFI RCCGGY 2 cut(s) 70, 853
BsrGI TGTACA 3 cut(s) 447, 635, 1400
BsrI ACTGG 1 cut(s) 1380
BssAI RCCGGY 2 cut(s) 70, 853
BssECI CCNNGG 2 cut(s) 1072, 1539
BssMI GATC 3 cut(s) 442, 879, 979
BssNAI GTATAC 1 cut(s) 235
BssSI CACGAG 1 cut(s) 1431
BssT1I CCWWGG 1 cut(s) 1539
Bst1107I GTATAC 1 cut(s) 235
Bst2BI CACGAG 1 cut(s) 1431
Bst2UI CCWGG 1 cut(s) 102
Bst4CI ACNGT 7 cut(s) 247, 422, 546, 1023, 1051, 1228, 1405
Bst6I CTCTTC 2 cut(s) 461, 1337
BstAUI TGTACA 3 cut(s) 447, 635, 1400
BstC8I GCNNGC 4 cut(s) 405, 722, 726, 1138
BstDEI CTNAG 4 cut(s) 89, 462, 797, 1464
BstDSI CCRYGG 1 cut(s) 1539
BstF5I GGATG 6 cut(s) 493, 499, 522, 916, 1311, 1507
BstFNI CGCG 2 cut(s) 40, 360
BstHHI GCGC 1 cut(s) 362
BstKTI GATC 3 cut(s) 445, 882, 982
BstMAI GTCTC 2 cut(s) 857, 1454
BstMBI GATC 3 cut(s) 442, 879, 979
BstMWI GCNNNNNNNGC 7 cut(s) 357, 503, 730, 1097, 1133, 1328, 1448
BstNI CCWGG 1 cut(s) 102
BstNSI RCATGY 3 cut(s) 724, 897, 1140
BstSCI CCNGG 2 cut(s) 100, 1072
BstSLI GKGCMC 1 cut(s) 680
BstUI CGCG 2 cut(s) 40, 360
BstV1I GCAGC 5 cut(s) 163, 539, 561, 1139, 1363
BstV2I GAAGAC 2 cut(s) 210, 797
BstX2I RGATCY 1 cut(s) 442
BstYI RGATCY 1 cut(s) 442
BstZ17I GTATAC 1 cut(s) 235
BsuRI GGCC 2 cut(s) 151, 503
BtgI CCRYGG 1 cut(s) 1539
BtsCI GGATG 6 cut(s) 493, 499, 522, 916, 1311, 1507
BtsIMutI CAGTG 1 cut(s) 1028
Cac8I GCNNGC 4 cut(s) 405, 722, 726, 1138
CaiI CAGNNNCTG 2 cut(s) 988, 1357
CciI TCATGA 1 cut(s) 1078
CfoI GCGC 1 cut(s) 362
Cfr10I RCCGGY 2 cut(s) 70, 853
Cfr13I GGNCC 4 cut(s) 501, 837, 1069, 1279
CseI GACGC 1 cut(s) 874
Csp6I GTAC 8 cut(s) 248, 448, 559, 636, 702, 851, 1401, 1502
CspAI ACCGGT 1 cut(s) 853
CspCI CAANNNNNGTGG 2 cut(s) 1017, 1052
CviQI GTAC 8 cut(s) 248, 448, 559, 636, 702, 851, 1401, 1502
DdeI CTNAG 4 cut(s) 89, 462, 797, 1464
DpnI GATC 3 cut(s) 444, 881, 981
DpnII GATC 3 cut(s) 442, 879, 979
DraI TTTAAA 1 cut(s) 45
Eam1104I CTCTTC 2 cut(s) 461, 1337
EarI CTCTTC 2 cut(s) 461, 1337
EciI GGCGGA 1 cut(s) 673
Eco130I CCWWGG 1 cut(s) 1539
Eco147I AGGCCT 1 cut(s) 151
Eco32I GATATC 1 cut(s) 998
Eco47I GGWCC 3 cut(s) 837, 1069, 1279
Eco57I CTGAAG 4 cut(s) 654, 817, 1085, 1461
EcoO109I RGGNCCY 2 cut(s) 1069, 1279
EcoRI GAATTC 1 cut(s) 1217
EcoRII CCWGG 1 cut(s) 100
EcoRV GATATC 1 cut(s) 998
EcoT14I CCWWGG 1 cut(s) 1539
EcoT22I ATGCAT 2 cut(s) 621, 895
ErhI CCWWGG 1 cut(s) 1539
Esp3I CGTCTC 1 cut(s) 857
FalI AAGNNNNNCTT 2 cut(s) 969, 1001
FaqI GGGAC 3 cut(s) 426, 1055, 1466
FblI GTMKAC 1 cut(s) 234
Fnu4HI GCNGC 7 cut(s) 177, 504, 553, 575, 1128, 1352, 1355
FokI GGATG 6 cut(s) 500, 506, 529, 923, 1318, 1494
Fsp4HI GCNGC 7 cut(s) 177, 504, 553, 575, 1128, 1352, 1355
FspBI CTAG 4 cut(s) 375, 395, 759, 1101
GlaI GCGC 1 cut(s) 361
GluI GCNGC 7 cut(s) 177, 504, 553, 575, 1128, 1352, 1355
GsaI CCCAGC 1 cut(s) 411
HaeIII GGCC 2 cut(s) 151, 503
HapII CCGG 3 cut(s) 71, 854, 1074
HgaI GACGC 1 cut(s) 874
HhaI GCGC 1 cut(s) 362
Hin6I GCGC 1 cut(s) 360
HinP1I GCGC 1 cut(s) 360
HindIII AAGCTT 1 cut(s) 630
HinfI GANTC 7 cut(s) 77, 536, 955, 1043, 1167, 1454, 1462
HpaII CCGG 3 cut(s) 71, 854, 1074
HphI GGTGA 2 cut(s) 90, 1421
Hpy166II GTNNAC 6 cut(s) 235, 370, 561, 851, 906, 1026
Hpy188I TCNGA 8 cut(s) 598, 612, 673, 1123, 1159, 1260, 1459, 1467
Hpy188III TCNNGA 4 cut(s) 282, 949, 993, 1079
Hpy8I GTNNAC 6 cut(s) 235, 370, 561, 851, 906, 1026
Hpy99I CGWCG 2 cut(s) 360, 422
HpyCH4III ACNGT 7 cut(s) 247, 422, 546, 1023, 1051, 1228, 1405
HpyCH4IV ACGT 1 cut(s) 709
HpyF10VI GCNNNNNNNGC 7 cut(s) 357, 503, 730, 1097, 1133, 1328, 1448
HpyF3I CTNAG 4 cut(s) 89, 462, 797, 1464
HpySE526I ACGT 1 cut(s) 709
HspAI GCGC 1 cut(s) 360
Kzo9I GATC 3 cut(s) 442, 879, 979
Lsp1109I GCAGC 5 cut(s) 163, 539, 561, 1139, 1363
LweI GCATC 4 cut(s) 400, 484, 880, 1296
MaeI CTAG 4 cut(s) 375, 395, 759, 1101
MaeII ACGT 1 cut(s) 709
MaeIII GTNAC 6 cut(s) 31, 537, 624, 933, 956, 1382
MalI GATC 3 cut(s) 444, 881, 981
MboI GATC 3 cut(s) 442, 879, 979
MboII GAAGA 9 cut(s) 215, 478, 660, 802, 899, 910, 1172, 1354, 1427
MflI RGATCY 1 cut(s) 442
MhlI GDGCHC 1 cut(s) 680
MluCI AATT 6 cut(s) 6, 155, 182, 1187, 1217, 1519
MluI ACGCGT 1 cut(s) 38
MlyI GAGTC 3 cut(s) 545, 964, 1456
MmeI TCCRAC 1 cut(s) 590
Mph1103I ATGCAT 2 cut(s) 621, 895
MroXI GAANNNNTTC 1 cut(s) 1422
MseI TTAA 5 cut(s) 44, 186, 1142, 1373, 1518
MslI CAYNNNNRTG 1 cut(s) 420
MspA1I CMGCKG 1 cut(s) 1354
MspI CCGG 3 cut(s) 71, 854, 1074
MspR9I CCNGG 2 cut(s) 102, 1074
Mva1269I GAATGC 2 cut(s) 291, 664
MvaI CCWGG 1 cut(s) 102
MvnI CGCG 2 cut(s) 40, 360
MwoI GCNNNNNNNGC 7 cut(s) 357, 503, 730, 1097, 1133, 1328, 1448
NciI CCSGG 1 cut(s) 1074
NcoI CCATGG 1 cut(s) 1539
NdeII GATC 3 cut(s) 442, 879, 979
NlaIV GGNNCC 4 cut(s) 812, 1071, 1281, 1425
NmuCI GTSAC 4 cut(s) 537, 933, 956, 1382
NsiI ATGCAT 2 cut(s) 621, 895
NspI RCATGY 3 cut(s) 724, 897, 1140
OliI CACNNNNGTG 1 cut(s) 420
PaeI GCATGC 2 cut(s) 724, 1140
PagI TCATGA 1 cut(s) 1078
PceI AGGCCT 1 cut(s) 151
PctI GAATGC 2 cut(s) 291, 664
PdmI GAANNNNTTC 1 cut(s) 1422
PfeI GAWTC 4 cut(s) 77, 1043, 1167, 1454
PflFI GACNNNGTC 1 cut(s) 422
PflMI CCANNNNNTGG 1 cut(s) 712
PinAI ACCGGT 1 cut(s) 853
PkrI GCNGC 7 cut(s) 178, 505, 554, 576, 1129, 1353, 1356
PleI GAGTC 3 cut(s) 544, 963, 1456
PpsI GAGTC 3 cut(s) 544, 963, 1456
PpuMI RGGWCCY 2 cut(s) 1069, 1279
Psp5II RGGWCCY 2 cut(s) 1069, 1279
Psp6I CCWGG 1 cut(s) 100
PspFI CCCAGC 1 cut(s) 407
PspGI CCWGG 1 cut(s) 100
PspN4I GGNNCC 4 cut(s) 812, 1071, 1281, 1425
PspPI GGNCC 4 cut(s) 501, 837, 1069, 1279
PspPPI RGGWCCY 2 cut(s) 1069, 1279
PstNI CAGNNNCTG 2 cut(s) 988, 1357
PsuI RGATCY 1 cut(s) 442
PsyI GACNNNGTC 1 cut(s) 422
RsaI GTAC 8 cut(s) 249, 449, 560, 637, 703, 852, 1402, 1503
RsaNI GTAC 8 cut(s) 248, 448, 559, 636, 702, 851, 1401, 1502
RseI CAYNNNNRTG 1 cut(s) 420
SaqAI TTAA 5 cut(s) 44, 186, 1142, 1373, 1518
SatI GCNGC 7 cut(s) 177, 504, 553, 575, 1128, 1352, 1355
Sau3AI GATC 3 cut(s) 442, 879, 979
Sau96I GGNCC 4 cut(s) 501, 837, 1069, 1279
SchI GAGTC 3 cut(s) 545, 964, 1456
ScrFI CCNGG 2 cut(s) 102, 1074
SduI GDGCHC 1 cut(s) 680
SfaNI GCATC 4 cut(s) 400, 484, 880, 1296
SinI GGWCC 3 cut(s) 837, 1069, 1279
SmiMI CAYNNNNRTG 1 cut(s) 420
SmlI CTYRAG 1 cut(s) 1210
SmoI CTYRAG 1 cut(s) 1210
SpeI ACTAGT 1 cut(s) 374
SphI GCATGC 2 cut(s) 724, 1140
Sse9I AATT 6 cut(s) 6, 155, 182, 1187, 1217, 1519
SseBI AGGCCT 1 cut(s) 151
SsiI CCGC 5 cut(s) 504, 658, 808, 1354, 1362
SspMI CTAG 4 cut(s) 375, 395, 759, 1101
StuI AGGCCT 1 cut(s) 151
StyD4I CCNGG 2 cut(s) 100, 1072
StyI CCWWGG 1 cut(s) 1539
TaaI ACNGT 7 cut(s) 247, 422, 546, 1023, 1051, 1228, 1405
TaiI ACGT 1 cut(s) 712
TaqI TCGA 2 cut(s) 882, 948
TasI AATT 6 cut(s) 6, 155, 182, 1187, 1217, 1519
TatI WGTACW 4 cut(s) 447, 558, 635, 1400
TauI GCSGC 2 cut(s) 506, 1357
TfiI GAWTC 4 cut(s) 77, 1043, 1167, 1454
Tru1I TTAA 5 cut(s) 44, 186, 1142, 1373, 1518
Tru9I TTAA 5 cut(s) 44, 186, 1142, 1373, 1518
TscAI CASTG 1 cut(s) 1028
TseFI GTSAC 4 cut(s) 537, 933, 956, 1382
TseI GCWGC 5 cut(s) 176, 552, 574, 1127, 1351
Tsp45I GTSAC 4 cut(s) 537, 933, 956, 1382
TspDTI ATGAA 8 cut(s) 239, 421, 533, 910, 989, 1196, 1200, 1428
TspGWI ACGGA 3 cut(s) 319, 923, 1309
TspRI CASTG 1 cut(s) 1028
Tth111I GACNNNGTC 1 cut(s) 422
Van91I CCANNNNNTGG 1 cut(s) 712
VpaK11BI GGWCC 3 cut(s) 837, 1069, 1279
XapI RAATTY 3 cut(s) 155, 1187, 1217
XceI RCATGY 3 cut(s) 724, 897, 1140
XmiI GTMKAC 1 cut(s) 234
XmnI GAANNNNTTC 1 cut(s) 1422
XspI CTAG 4 cut(s) 375, 395, 759, 1101
Zsp2I ATGCAT 2 cut(s) 621, 895
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.