RLG00000020793

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000074
Physical Location & Seq
Forward (+)
68749933 .. 68752746
2814 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020793

Sequence Viewer

Length: 2115 bp
ATGGAGTCAGACGAAGGGGGGCTTCGATACTCTGACCATCTATATTTTGATTATTCCATATCGGACGGAGAGGAATCAGAAGATGAATTGTCCATTCGGTTCGGACATGCATATGAAAGAGCACATACAGATGAGGCAAACTTGAGCGGAAGACCGACAGAACTAGGTGGCCCCAGGACTGAATCAGCTAACCACACAGACTGCGCACAGCATAATGAATGTGGTGAACTGAGGACATCACCTGGTAGAGAACCAAATAAAGTAACATCACCTGATGTAGCTGTTGATAGGACTGAGTTTGTGAGCAACACAGGGACTGCGCAGCTTAACAGAAAGGATTTTGAAGACCTGACAATGGATGATATGAAGGCAGTATATTTTCCAACCGTAGAAGAAGCAGAAAAGTTCTACAGACTATATTCACGAACCGTCGGTTTCGGCATACGGAGGGGCAGGCGTGAGATGGAAGGGGATGAACTGATTGTGAGGAGGCAGTGGGTCTGTTCAAAAGAAGGAATGTCAAGGATTAAGCCGAGGAAGGAAAAAGATGTGGATAAGGACAGAACCCCTAAGAAGCAGAACATCGGCGAGGCGAAGAAATCGAGGAGGAATATGATACCGCGGGGGAGGAGATACACTAGAGTGAACTACCCTGCTGCTTTCAACATACGGTATTGCAGGGATAGGCAGCTATACAAGGTCACCAGGTTTGTACGCGAGCACAATCATGATCTTGCCATGGCCCATGAGCTGCAGTTCTTGCGGGCAAACCGAAAGGTTGAAGAGAGAGCTGTTAAGCAGGTGGAAAACCTACATCGCGCACAAATTTACAGTAGTGCGGCTTATGAGCACCTGGTAGAGCAAGCCGGGGGGCACGAATTTGTTGGGTTCTCGGCAAAAGATCTGTACAACATTCTTGATAGGAAGAGGAGAAAGGAGCAGATTGGGAGGTACACCAGGCTGTGTGAAGTAATGCCAAGAATGGAGAGGACACTGGGGCGCATCAGGAACCGCGTTCTCTATGACAACTTCCTGTTGAAAAACAGCGCACCCGTGTACGAGACGCACATGAGGGGCATTGAGGAAGATGTATGCAGGCTGTTCACACATGACATATTTGTCATGATTAAGTCTCAGATCTTGTTTGAGAGGAAGTTTGTTATGGAGAGTGAAGTAGCCTTCAATATTTCGGACTCTGTGATGTTCTACCTTCGGCAATATGACAGGCCGAAACGGAAGTGGTGTGTTGAGTTCCGTTCAGACCCGGCTAATCCGAAGTGGCTCTGTTCTTGCAAACTGTTCGAATCAGACGGAATTCCCTGCGGTCACATTTTCAACATACTGAAGTATCAGCTTGTCTCTAGATATCCCAAAAGCCTGATATCCAGGCGGTGGACCAAGGCTGTGAGTGAAACGACATTTGCACCAAGACTAAAGGGCCGAACTGATGATAAGTCGGCAAAAGTTACACGGTATTCTGCCCTCATATCAGAAGTCTCGAAAGCATGCCAAAATTACGCATTTTCTGACGAAGGATTCAAGGTGGGAATGACTGAATTTGTGAGGCTCGGTGAAACTTCGAGCGAATTCCGTGTGGATTTACCAACGGACACATCAAATGTGCCTCCAATCAGCAACGTTGTGAGGGACCCAACACTATCCCGTACGAAGGGGATGCCTTCTAGTCCTTGCACAAACACTGAAAATGGAACCATTGGGCAACGTGTGTGCCGATTATGTTTCATGCCCGGTCACAACAGGTGCACATGTCCTGGTCGGGATGAAGTTGCTCCCGCTCGTGAAGAAGTGCCTTCAACGGGTTCAGTACCTCACCCCGCAGATTCAGTCAATCAGTCCACACATTCAGTAGCTGATCCGGCATCGTCAGTCCCTCATCCAGCACGGTGCGTCCCTCAGCCAGACCGTTCCTTCCTGCAGCTTGCACCCCTGGTTGAGGGCCACCAACCCTTGGAAGCCGATGCTGATGGGGATGGCGTTAGCCAGATGTGTGATTTCGGAGATTTCCCACCCTTCTTTGCTTCCCAGCAGTCATCCTCACTTGGTGCTCTGCATCTGCCCTTGAACAGGAGACTCGCAGCTAGGTGCGGTACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

705

Amino Acids

80.49

Weight (kDa)

8.63

Isoelectric Point (pI)

50.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 135 - 246 1.6e-12 FAR1 DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 790
AasI GACNNNNNNGTC 1 cut(s) 1118
Acc16I TGCGCA 2 cut(s) 205, 321
Acc36I ACCTGC 1 cut(s) 790
Acc65I GGTACC 1 cut(s) 2108
AccB1I GGYRCC 1 cut(s) 2108
AccB7I CCANNNNNTGG 2 cut(s) 1392, 1969
AccBSI CCGCTC 2 cut(s) 147, 1796
AccII CGCG 4 cut(s) 622, 717, 819, 1014
AclI AACGTT 1 cut(s) 1638
AclWI GGATC 1 cut(s) 1868
AcsI RAATTY 5 cut(s) 825, 878, 1314, 1556, 1586
AcuI CTGAAG 1 cut(s) 1364
AdeI CACNNNGTG 1 cut(s) 2063
AfaI GTAC 7 cut(s) 714, 908, 953, 1058, 1666, 1827, 2110
AfiI CCNNNNNNNGG 7 cut(s) 355, 1392, 1669, 1817, 1954, 1969, 2085
AflIII ACRYGT 2 cut(s) 1723, 1766
AjnI CCWGG 8 cut(s) 173, 241, 704, 852, 956, 1385, 1771, 1947
AleI CACNNNNGTG 1 cut(s) 641
Alw21I GWGCWC 5 cut(s) 124, 723, 852, 1766, 2068
Alw26I GTCTC 5 cut(s) 1055, 1137, 1363, 1501, 2083
Alw44I GTGCAC 1 cut(s) 1762
AlwI GGATC 1 cut(s) 1868
AlwNI CAGNNNCTG 2 cut(s) 317, 1871
AoxI GGCC 5 cut(s) 169, 741, 1226, 1438, 1957
ApaLI GTGCAC 1 cut(s) 1762
ApeKI GCWGC 6 cut(s) 322, 656, 688, 751, 1936, 2096
ApoI RAATTY 5 cut(s) 825, 878, 1314, 1556, 1586
Asp718I GGTACC 1 cut(s) 2108
AspLEI GCGC 5 cut(s) 206, 322, 821, 1002, 1049
AspS9I GGNCC 6 cut(s) 170, 742, 1395, 1438, 1648, 1957
AsuC2I CCSGG 3 cut(s) 868, 1265, 1749
AsuHPI GGTGA 6 cut(s) 231, 236, 261, 694, 1583, 1823
AsuII TTCGAA 1 cut(s) 1302
AvaII GGWCC 2 cut(s) 1395, 1648
BaeGI GKGCMC 2 cut(s) 876, 1766
BaeI ACNNNNGTAYC 2 cut(s) 1331, 1364
BanI GGYRCC 1 cut(s) 2108
BauI CACGAG 1 cut(s) 1797
BbsI GAAGAC 2 cut(s) 157, 351
Bbv12I GWGCWC 5 cut(s) 124, 723, 852, 1766, 2068
BbvCI CCTCAGC 1 cut(s) 1914
BbvI GCAGC 6 cut(s) 334, 643, 700, 738, 1948, 2108
BccI CCATC 4 cut(s) 45, 457, 1979, 1985
BcgI CGANNNNNNTGC 4 cut(s) 1282, 1316, 1657, 1691
BciT130I CCWGG 8 cut(s) 175, 243, 706, 854, 958, 1387, 1773, 1949
BcnI CCSGG 3 cut(s) 868, 1265, 1749
BcoDI GTCTC 5 cut(s) 1055, 1137, 1363, 1501, 2083
BfaI CTAG 5 cut(s) 164, 639, 1362, 1683, 2100
BfmI CTRYAG 3 cut(s) 409, 752, 1934
BfuAI ACCTGC 1 cut(s) 790
BglII AGATCT 2 cut(s) 901, 1137
BisI GCNGC 7 cut(s) 323, 657, 689, 752, 840, 1937, 2097
BlsI GCNGC 7 cut(s) 324, 658, 690, 753, 841, 1938, 2098
Bme18I GGWCC 2 cut(s) 1395, 1648
BmgT120I GGNCC 6 cut(s) 170, 742, 1395, 1438, 1648, 1957
BmiI GGNNCC 6 cut(s) 172, 1010, 1649, 1650, 1711, 2110
BmrI ACTGGG 1 cut(s) 1004
BmsI GCATC 5 cut(s) 1011, 1665, 1889, 1969, 2080
BmuI ACTGGG 1 cut(s) 1004
BpiI GAAGAC 2 cut(s) 157, 351
Bpu10I CCTNAGC 1 cut(s) 1914
Bpu14I TTCGAA 1 cut(s) 1302
BpuEI CTTGAG 1 cut(s) 163
BpuMI CCSGG 3 cut(s) 868, 1265, 1749
BsaJI CCNNGG 8 cut(s) 173, 533, 620, 738, 867, 1398, 1947, 1968
Bsc4I CCNNNNNNNGG 7 cut(s) 355, 1392, 1669, 1817, 1954, 1969, 2085
Bse1I ACTGG 1 cut(s) 999
BseBI CCWGG 8 cut(s) 175, 243, 706, 854, 958, 1387, 1773, 1949
BseDI CCNNGG 8 cut(s) 173, 533, 620, 738, 867, 1398, 1947, 1968
BseGI GGATG 7 cut(s) 364, 478, 1680, 1786, 1894, 1996, 2051
BseLI CCNNNNNNNGG 7 cut(s) 355, 1392, 1669, 1817, 1954, 1969, 2085
BseMII CTCAG 4 cut(s) 221, 285, 1148, 1928
BseNI ACTGG 1 cut(s) 999
BseRI GAGGAG 4 cut(s) 502, 619, 643, 943
BseSI GKGCMC 2 cut(s) 876, 1766
BseXI GCAGC 6 cut(s) 334, 643, 700, 738, 1948, 2108
BseYI CCCAGC 1 cut(s) 2043
Bsh1236I CGCG 4 cut(s) 622, 717, 819, 1014
BshFI GGCC 5 cut(s) 171, 743, 1228, 1440, 1959
BshNI GGYRCC 1 cut(s) 2108
BsiHKAI GWGCWC 5 cut(s) 124, 723, 852, 1766, 2068
BsiSI CCGG 4 cut(s) 867, 1265, 1749, 1877
BsiWI CGTACG 1 cut(s) 1664
BslFI GGGAC 4 cut(s) 328, 1661, 1874, 1895
BslI CCNNNNNNNGG 7 cut(s) 355, 1392, 1669, 1817, 1954, 1969, 2085
BsmAI GTCTC 5 cut(s) 1055, 1137, 1363, 1501, 2083
BsmBI CGTCTC 1 cut(s) 1055
BsmFI GGGAC 4 cut(s) 328, 1661, 1874, 1895
BsnI GGCC 5 cut(s) 171, 743, 1228, 1440, 1959
Bsp119I TTCGAA 1 cut(s) 1302
Bsp1286I GDGCHC 6 cut(s) 124, 723, 852, 876, 1766, 2068
Bsp1407I TGTACA 1 cut(s) 906
Bsp143I GATC 4 cut(s) 730, 901, 1137, 1873
Bsp19I CCATGG 1 cut(s) 738
BspANI GGCC 5 cut(s) 171, 743, 1228, 1440, 1959
BspCNI CTCAG 4 cut(s) 222, 286, 1147, 1927
BspFNI CGCG 4 cut(s) 622, 717, 819, 1014
BspHI TCATGA 2 cut(s) 727, 1122
BspLI GGNNCC 6 cut(s) 172, 1010, 1649, 1650, 1711, 2110
BspMAI CTGCAG 2 cut(s) 756, 1938
BspMI ACCTGC 1 cut(s) 790
BspPI GGATC 1 cut(s) 1868
BspT104I TTCGAA 1 cut(s) 1302
BspT107I GGYRCC 1 cut(s) 2108
BsrBI CCGCTC 2 cut(s) 147, 1796
BsrGI TGTACA 1 cut(s) 906
BsrI ACTGG 1 cut(s) 999
BssECI CCNNGG 8 cut(s) 173, 533, 620, 738, 867, 1398, 1947, 1968
BssMI GATC 4 cut(s) 730, 901, 1137, 1873
BssSI CACGAG 1 cut(s) 1797
BssT1I CCWWGG 3 cut(s) 738, 1398, 1968
Bst2BI CACGAG 1 cut(s) 1797
Bst2UI CCWGG 8 cut(s) 175, 243, 706, 854, 958, 1387, 1773, 1949
Bst4CI ACNGT 8 cut(s) 388, 430, 672, 833, 1299, 1473, 1905, 1925
Bst6I CTCTTC 2 cut(s) 777, 920
BstAPI GCANNNNNTGC 1 cut(s) 760
BstAUI TGTACA 1 cut(s) 906
BstBI TTCGAA 1 cut(s) 1302
BstC8I GCNNGC 7 cut(s) 455, 719, 765, 864, 1097, 1507, 1941
BstDEI CTNAG 5 cut(s) 230, 294, 570, 1134, 1914
BstDSI CCRYGG 2 cut(s) 620, 738
BstEII GGTNACC 1 cut(s) 700
BstENI CCTNNNNNAGG 2 cut(s) 1952, 2083
BstF5I GGATG 7 cut(s) 364, 478, 1680, 1786, 1894, 1996, 2051
BstFNI CGCG 4 cut(s) 622, 717, 819, 1014
BstHHI GCGC 5 cut(s) 206, 322, 821, 1002, 1049
BstKTI GATC 4 cut(s) 733, 904, 1140, 1876
BstMAI GTCTC 5 cut(s) 1055, 1137, 1363, 1501, 2083
BstMBI GATC 4 cut(s) 730, 901, 1137, 1873
BstMWI GCNNNNNNNGC 2 cut(s) 760, 1877
BstNI CCWGG 8 cut(s) 175, 243, 706, 854, 958, 1387, 1773, 1949
BstNSI RCATGY 3 cut(s) 110, 1509, 1770
BstPI GGTNACC 1 cut(s) 700
BstSFI CTRYAG 3 cut(s) 409, 752, 1934
BstSLI GKGCMC 2 cut(s) 876, 1766
BstUI CGCG 4 cut(s) 622, 717, 819, 1014
BstV1I GCAGC 6 cut(s) 334, 643, 700, 738, 1948, 2108
BstV2I GAAGAC 2 cut(s) 157, 351
BstX2I RGATCY 2 cut(s) 901, 1137
BstYI RGATCY 2 cut(s) 901, 1137
BsuRI GGCC 5 cut(s) 171, 743, 1228, 1440, 1959
BtgI CCRYGG 2 cut(s) 620, 738
BtgZI GCGATG 1 cut(s) 800
BtsCI GGATG 7 cut(s) 364, 478, 1680, 1786, 1894, 1996, 2051
BtsI GCAGTG 1 cut(s) 500
BtsIMutI CAGTG 3 cut(s) 500, 992, 1698
BveI ACCTGC 1 cut(s) 790
Cac8I GCNNGC 7 cut(s) 455, 719, 765, 864, 1097, 1507, 1941
CaiI CAGNNNCTG 2 cut(s) 317, 1871
CciI TCATGA 2 cut(s) 727, 1122
CfoI GCGC 5 cut(s) 206, 322, 821, 1002, 1049
Cfr13I GGNCC 6 cut(s) 170, 742, 1395, 1438, 1648, 1957
Cfr42I CCGCGG 1 cut(s) 623
CseI GACGC 2 cut(s) 1072, 1897
CsiI ACCWGGT 3 cut(s) 241, 704, 852
Csp6I GTAC 7 cut(s) 713, 907, 952, 1057, 1665, 1826, 2109
CviQI GTAC 7 cut(s) 713, 907, 952, 1057, 1665, 1826, 2109
DdeI CTNAG 5 cut(s) 230, 294, 570, 1134, 1914
DpnI GATC 4 cut(s) 732, 903, 1139, 1875
DpnII GATC 4 cut(s) 730, 901, 1137, 1873
DraIII CACNNNGTG 1 cut(s) 2063
DrdI GACNNNNNNGTC 1 cut(s) 1118
DseDI GACNNNNNNGTC 1 cut(s) 1118
Eam1104I CTCTTC 2 cut(s) 777, 920
EarI CTCTTC 2 cut(s) 777, 920
Eco130I CCWWGG 3 cut(s) 738, 1398, 1968
Eco32I GATATC 2 cut(s) 1367, 1383
Eco47I GGWCC 2 cut(s) 1395, 1648
Eco57I CTGAAG 1 cut(s) 1364
Eco91I GGTNACC 1 cut(s) 700
EcoNI CCTNNNNNAGG 2 cut(s) 1952, 2083
EcoO109I RGGNCCY 1 cut(s) 1648
EcoO65I GGTNACC 1 cut(s) 700
EcoRI GAATTC 2 cut(s) 1314, 1586
EcoRII CCWGG 8 cut(s) 173, 241, 704, 852, 956, 1385, 1771, 1947
EcoRV GATATC 2 cut(s) 1367, 1383
EcoT14I CCWWGG 3 cut(s) 738, 1398, 1968
EcoT22I ATGCAT 1 cut(s) 112
ErhI CCWWGG 3 cut(s) 738, 1398, 1968
Esp3I CGTCTC 1 cut(s) 1055
FalI AAGNNNNNCTT 1 cut(s) 38
FaqI GGGAC 4 cut(s) 328, 1661, 1874, 1895
FauI CCCGC 4 cut(s) 615, 756, 1801, 1843
FauNDI CATATG 1 cut(s) 112
Fnu4HI GCNGC 7 cut(s) 323, 657, 689, 752, 840, 1937, 2097
FokI GGATG 7 cut(s) 371, 485, 1687, 1793, 1881, 2003, 2038
Fsp4HI GCNGC 7 cut(s) 323, 657, 689, 752, 840, 1937, 2097
FspBI CTAG 5 cut(s) 164, 639, 1362, 1683, 2100
FspI TGCGCA 2 cut(s) 205, 321
GlaI GCGC 5 cut(s) 205, 321, 820, 1001, 1048
GluI GCNGC 7 cut(s) 323, 657, 689, 752, 840, 1937, 2097
GsaI CCCAGC 1 cut(s) 2047
HaeIII GGCC 5 cut(s) 171, 743, 1228, 1440, 1959
HapII CCGG 4 cut(s) 867, 1265, 1749, 1877
HgaI GACGC 2 cut(s) 1072, 1897
HhaI GCGC 5 cut(s) 206, 322, 821, 1002, 1049
Hin6I GCGC 5 cut(s) 204, 320, 819, 1000, 1047
HinP1I GCGC 5 cut(s) 204, 320, 819, 1000, 1047
HinfI GANTC 8 cut(s) 5, 74, 182, 1193, 1304, 1536, 1841, 2091
HpaII CCGG 4 cut(s) 867, 1265, 1749, 1877
HphI GGTGA 6 cut(s) 231, 236, 261, 694, 1583, 1823
Hpy166II GTNNAC 8 cut(s) 227, 646, 954, 1057, 1104, 1395, 1764, 1857
Hpy188III TCNNGA 9 cut(s) 423, 728, 917, 1006, 1123, 1362, 1498, 1778, 1799
Hpy8I GTNNAC 8 cut(s) 227, 646, 954, 1057, 1104, 1395, 1764, 1857
Hpy99I CGWCG 1 cut(s) 434
HpyCH4III ACNGT 8 cut(s) 388, 430, 672, 833, 1299, 1473, 1905, 1925
HpyCH4IV ACGT 2 cut(s) 1638, 1723
HpyF10VI GCNNNNNNNGC 2 cut(s) 760, 1877
HpyF3I CTNAG 5 cut(s) 230, 294, 570, 1134, 1914
HpySE526I ACGT 2 cut(s) 1638, 1723
HspAI GCGC 5 cut(s) 204, 320, 819, 1000, 1047
KflI GGGWCCC 1 cut(s) 1648
KpnI GGTACC 1 cut(s) 2112
KspI CCGCGG 1 cut(s) 623
Kzo9I GATC 4 cut(s) 730, 901, 1137, 1873
LmnI GCTCC 2 cut(s) 937, 1795
Lsp1109I GCAGC 6 cut(s) 334, 643, 700, 738, 1948, 2108
LweI GCATC 5 cut(s) 1011, 1665, 1889, 1969, 2080
MabI ACCWGGT 3 cut(s) 241, 704, 852
MaeI CTAG 5 cut(s) 164, 639, 1362, 1683, 2100
MaeII ACGT 2 cut(s) 1638, 1723
MaeIII GTNAC 5 cut(s) 262, 700, 1325, 1465, 1751
MalI GATC 4 cut(s) 732, 903, 1139, 1875
MbiI CCGCTC 2 cut(s) 147, 1796
MboI GATC 4 cut(s) 730, 901, 1137, 1873
MboII GAAGA 9 cut(s) 92, 162, 356, 404, 607, 794, 937, 1097, 1814
MflI RGATCY 2 cut(s) 901, 1137
MhlI GDGCHC 6 cut(s) 124, 723, 852, 876, 1766, 2068
MluCI AATT 7 cut(s) 86, 825, 878, 1314, 1513, 1556, 1586
MlyI GAGTC 3 cut(s) 14, 1187, 2085
MmeI TCCRAC 1 cut(s) 407
Mph1103I ATGCAT 1 cut(s) 112
MseI TTAA 4 cut(s) 327, 528, 795, 1128
MslI CAYNNNNRTG 4 cut(s) 111, 129, 641, 726
MspA1I CMGCKG 1 cut(s) 622
MspI CCGG 4 cut(s) 867, 1265, 1749, 1877
MvaI CCWGG 8 cut(s) 175, 243, 706, 854, 958, 1387, 1773, 1949
MvnI CGCG 4 cut(s) 622, 717, 819, 1014
MwoI GCNNNNNNNGC 2 cut(s) 760, 1877
NciI CCSGG 3 cut(s) 868, 1265, 1749
NcoI CCATGG 1 cut(s) 738
NdeI CATATG 1 cut(s) 112
NdeII GATC 4 cut(s) 730, 901, 1137, 1873
NlaIV GGNNCC 6 cut(s) 172, 1010, 1649, 1650, 1711, 2110
NmeAIII GCCGAG 2 cut(s) 558, 872
NmuCI GTSAC 3 cut(s) 700, 1325, 1751
NsbI TGCGCA 2 cut(s) 205, 321
NsiI ATGCAT 1 cut(s) 112
NspI RCATGY 3 cut(s) 110, 1509, 1770
NspV TTCGAA 1 cut(s) 1302
OliI CACNNNNGTG 1 cut(s) 641
PaeI GCATGC 1 cut(s) 1509
PagI TCATGA 2 cut(s) 727, 1122
PaqCI CACCTGC 1 cut(s) 790
PciI ACATGT 1 cut(s) 1766
PcsI WCGNNNNNNNCGW 1 cut(s) 1729
PfeI GAWTC 5 cut(s) 74, 182, 1304, 1536, 1841
Pfl23II CGTACG 1 cut(s) 1664
PflMI CCANNNNNTGG 2 cut(s) 1392, 1969
PkrI GCNGC 7 cut(s) 324, 658, 690, 753, 841, 1938, 2098
PleI GAGTC 3 cut(s) 13, 1187, 2085
PpsI GAGTC 3 cut(s) 13, 1187, 2085
PpuMI RGGWCCY 1 cut(s) 1648
PscI ACATGT 1 cut(s) 1766
Psp1406I AACGTT 1 cut(s) 1638
Psp5II RGGWCCY 1 cut(s) 1648
Psp6I CCWGG 8 cut(s) 173, 241, 704, 852, 956, 1385, 1771, 1947
PspEI GGTNACC 1 cut(s) 700
PspFI CCCAGC 1 cut(s) 2043
PspGI CCWGG 8 cut(s) 173, 241, 704, 852, 956, 1385, 1771, 1947
PspLI CGTACG 1 cut(s) 1664
PspN4I GGNNCC 6 cut(s) 172, 1010, 1649, 1650, 1711, 2110
PspPI GGNCC 6 cut(s) 170, 742, 1395, 1438, 1648, 1957
PspPPI RGGWCCY 1 cut(s) 1648
PstI CTGCAG 2 cut(s) 756, 1938
PstNI CAGNNNCTG 2 cut(s) 317, 1871
PsuI RGATCY 2 cut(s) 901, 1137
RsaI GTAC 7 cut(s) 714, 908, 953, 1058, 1666, 1827, 2110
RsaNI GTAC 7 cut(s) 713, 907, 952, 1057, 1665, 1826, 2109
RseI CAYNNNNRTG 4 cut(s) 111, 129, 641, 726
SacII CCGCGG 1 cut(s) 623
SaqAI TTAA 4 cut(s) 327, 528, 795, 1128
SatI GCNGC 7 cut(s) 323, 657, 689, 752, 840, 1937, 2097
Sau3AI GATC 4 cut(s) 730, 901, 1137, 1873
Sau96I GGNCC 6 cut(s) 170, 742, 1395, 1438, 1648, 1957
SchI GAGTC 3 cut(s) 14, 1187, 2085
SduI GDGCHC 6 cut(s) 124, 723, 852, 876, 1766, 2068
SexAI ACCWGGT 3 cut(s) 241, 704, 852
SfaNI GCATC 5 cut(s) 1011, 1665, 1889, 1969, 2080
SfcI CTRYAG 3 cut(s) 409, 752, 1934
Sfr303I CCGCGG 1 cut(s) 623
SfuI TTCGAA 1 cut(s) 1302
SgrBI CCGCGG 1 cut(s) 623
SinI GGWCC 2 cut(s) 1395, 1648
SmiMI CAYNNNNRTG 4 cut(s) 111, 129, 641, 726
SmlI CTYRAG 1 cut(s) 142
SmoI CTYRAG 1 cut(s) 142
SphI GCATGC 1 cut(s) 1509
Sse9I AATT 7 cut(s) 86, 825, 878, 1314, 1513, 1556, 1586
SspI AATATT 1 cut(s) 1186
SspMI CTAG 5 cut(s) 164, 639, 1362, 1683, 2100
StyI CCWWGG 3 cut(s) 738, 1398, 1968
TaaI ACNGT 8 cut(s) 388, 430, 672, 833, 1299, 1473, 1905, 1925
TaiI ACGT 2 cut(s) 1641, 1726
TaqI TCGA 5 cut(s) 25, 602, 1302, 1499, 1580
TaqII GACCGA 1 cut(s) 169
TasI AATT 7 cut(s) 86, 825, 878, 1314, 1513, 1556, 1586
TatI WGTACW 1 cut(s) 906
TauI GCSGC 1 cut(s) 842
TfiI GAWTC 5 cut(s) 74, 182, 1304, 1536, 1841
Tru1I TTAA 4 cut(s) 327, 528, 795, 1128
Tru9I TTAA 4 cut(s) 327, 528, 795, 1128
TscAI CASTG 3 cut(s) 500, 999, 1705
TseFI GTSAC 3 cut(s) 700, 1325, 1751
TseI GCWGC 6 cut(s) 322, 656, 688, 751, 1936, 2096
Tsp45I GTSAC 3 cut(s) 700, 1325, 1751
TspDTI ATGAA 7 cut(s) 99, 129, 231, 380, 489, 1732, 1797
TspGWI ACGGA 7 cut(s) 81, 460, 1244, 1249, 1326, 1580, 1622
TspRI CASTG 3 cut(s) 500, 999, 1705
Van91I CCANNNNNTGG 2 cut(s) 1392, 1969
VneI GTGCAC 1 cut(s) 1762
VpaK11BI GGWCC 2 cut(s) 1395, 1648
XagI CCTNNNNNAGG 2 cut(s) 1952, 2083
XapI RAATTY 5 cut(s) 825, 878, 1314, 1556, 1586
XbaI TCTAGA 1 cut(s) 1361
XceI RCATGY 3 cut(s) 110, 1509, 1770
XspI CTAG 5 cut(s) 164, 639, 1362, 1683, 2100
Zsp2I ATGCAT 1 cut(s) 112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.