Rroxscaffold_1G00041760

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000074
Physical Location & Seq
Reverse (-)
59716804 .. 59719201
2398 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00041760.1

Sequence Viewer

Length: 1110 bp
ATGGCATGTCGGGAAAATGTGTGTCAGCATTTGAAAGACGTGGATACACAGAGACACTTTTTCCATTTGATTTTTGCTGGACTTACTATTGAGGAATGGGAAATGGCTTGGCAGTACTTTGTGGCAATGAACCGGCTGGAAAACAATGAATGGGTGACTAGTATGTACAATAAACGTGAAAGGTGGGCGGAGGCCTTTTTTCGAGACCATTTTTTTGGAGGAATCTGCAGCACCCAACGATGTGACAGGATGCATAGAAATCTTGAAGAAGGTATTGACCGTTATATGAGGCTGTATGAGGTCTTGCCCCGGATGGAGAAAACAATTGAGCGGATAAGAAATCAGGTCCTACAGGATGATTACCAATCACAGAACTATGACCCTGTGTATGGGAGCCACATGCGTTGTTTGCAGGAGGAGATTGGGAAAAGGTTCACCCATGACATCTTTCTCTTAATCAAGGAGCAGATTAATTTTGAGTCCAAGTTTGTTATTGGGCCAAGAAGTGTTCATCCAAAAACTGGTGCGTCATTGATTTCGCTGATGCAATATGGAAGGCCTGAGCGGAGGTGGATTGTGTCGTACCAGCCTGATGAAAGCAATCCAACATTAGTGTGTTCTTGCAAACTGTTCGAGTCTGATGGAATTCCCTGTTGTCACATTTTTGCTGTCATGAAATTTGAGATGCTCACAACATTCCCAGAATCGTTGGTGAATAAACGGTGGACAAAAGAAGCCACTGTTAAGACAGCAATATCGAGTTCCGGTTTGGTTAGTAACATGTCTGTGCAGATTGCACGGTATGGTGAATTGATGGCACAATGTGCTAAAATCTGCCATATTGCTTCCTATCGTGAGGAGGGGTACAATGAGATCAGAGAAGCTCTGAGCCAGCTGACCATACGATCCCAAAAGTACAGCGGTGAGAGTGAGTTTGAAAATGGTGTCCGTAGCCAAAGCCAGCCCATGAATTTGACTCATCACCTCGAAGAAGCCCGGGCATTTGAGTTTTTTGCTGGGTATGAGAAAAGTAAAAATGCCGCTTTGGACTCCCAAATTACTGGACTTCCAGATTTCTTTCAAAAGTTCAGGCCCTTTCCCAATGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

369

Amino Acids

43.36

Weight (kDa)

6.48

Isoelectric Point (pI)

52.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SWIM PF04434 193 - 225 7.4e-06 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 521
AccBSI CCGCTC 2 cut(s) 331, 565
AciI CCGC 5 cut(s) 188, 331, 565, 921, 1041
AclWI GGATC 1 cut(s) 900
AcsI RAATTY 3 cut(s) 645, 677, 970
AdeI CACNNNGTG 1 cut(s) 824
AfaI GTAC 5 cut(s) 116, 167, 584, 866, 917
AfiI CCNNNNNNNGG 2 cut(s) 389, 521
AflIII ACRYGT 1 cut(s) 780
AgsI TTSAA 4 cut(s) 34, 266, 938, 1082
AhlI ACTAGT 1 cut(s) 158
AjiI CACGTC 1 cut(s) 40
AluBI AGCT 2 cut(s) 884, 895
AluI AGCT 2 cut(s) 884, 895
Alw26I GTCTC 2 cut(s) 46, 198
AlwI GGATC 1 cut(s) 900
Ama87I CYCGRG 1 cut(s) 996
AoxI GGCC 4 cut(s) 192, 497, 557, 1091
ApeKI GCWGC 1 cut(s) 228
ApoI RAATTY 3 cut(s) 645, 677, 970
ArsI GACNNNNNNTTYG 2 cut(s) 197, 229
AseI ATTAAT 1 cut(s) 471
Asp700I GAANNNNTTC 1 cut(s) 431
AspS9I GGNCC 3 cut(s) 346, 497, 1092
AsuC2I CCSGG 3 cut(s) 310, 997, 998
AsuHPI GGTGA 6 cut(s) 166, 427, 724, 818, 935, 974
AvaI CYCGRG 1 cut(s) 996
AvaII GGWCC 1 cut(s) 346
BbvI GCAGC 1 cut(s) 240
BccI CCATC 3 cut(s) 307, 635, 808
BcgI CGANNNNNNTGC 2 cut(s) 613, 647
BciVI GTATCC 1 cut(s) 37
BcnI CCSGG 3 cut(s) 310, 997, 998
BcoDI GTCTC 2 cut(s) 46, 198
BcuI ACTAGT 1 cut(s) 158
BfaI CTAG 1 cut(s) 159
BfmI CTRYAG 2 cut(s) 226, 350
BfuI GTATCC 1 cut(s) 37
BisI GCNGC 2 cut(s) 229, 1041
BlsI GCNGC 2 cut(s) 230, 1042
BmcAI AGTACT 1 cut(s) 116
Bme1390I CCNGG 3 cut(s) 310, 997, 998
Bme18I GGWCC 1 cut(s) 346
BmeT110I CYCGRG 1 cut(s) 996
BmgBI CACGTC 1 cut(s) 40
BmgT120I GGNCC 3 cut(s) 346, 497, 1092
BmiI GGNNCC 1 cut(s) 395
BmrFI CCNGG 3 cut(s) 310, 997, 998
BmsI GCATC 3 cut(s) 240, 534, 675
Bpu10I CCTNAGC 1 cut(s) 561
BpuMI CCSGG 3 cut(s) 310, 997, 998
BsaI GGTCTC 1 cut(s) 198
BsaJI CCNNGG 2 cut(s) 308, 996
BsaWI WCCGGW 1 cut(s) 764
Bsc4I CCNNNNNNNGG 2 cut(s) 389, 521
Bse118I RCCGGY 1 cut(s) 132
Bse1I ACTGG 2 cut(s) 526, 1066
Bse3DI GCAATG 1 cut(s) 132
BseDI CCNNGG 2 cut(s) 308, 996
BseGI GGATG 4 cut(s) 255, 318, 361, 511
BseLI CCNNNNNNNGG 2 cut(s) 389, 521
BseMI GCAATG 1 cut(s) 132
BseMII CTCAG 2 cut(s) 552, 878
BseNI ACTGG 2 cut(s) 526, 1066
BseRI GAGGAG 2 cut(s) 431, 872
BseXI GCAGC 1 cut(s) 240
BseYI CCCAGC 1 cut(s) 1016
BsgI GTGCAG 1 cut(s) 809
BshFI GGCC 4 cut(s) 194, 499, 559, 1093
BsiHKCI CYCGRG 1 cut(s) 996
BsiSI CCGG 4 cut(s) 133, 310, 765, 997
BslI CCNNNNNNNGG 2 cut(s) 389, 521
BsmAI GTCTC 2 cut(s) 46, 198
BsnI GGCC 4 cut(s) 194, 499, 559, 1093
Bso31I GGTCTC 1 cut(s) 198
BsoBI CYCGRG 1 cut(s) 996
Bsp1407I TGTACA 1 cut(s) 165
Bsp143I GATC 2 cut(s) 873, 905
BspACI CCGC 5 cut(s) 188, 331, 565, 921, 1041
BspANI GGCC 4 cut(s) 194, 499, 559, 1093
BspCNI CTCAG 2 cut(s) 553, 879
BspHI TCATGA 1 cut(s) 672
BspLI GGNNCC 1 cut(s) 395
BspMAI CTGCAG 1 cut(s) 230
BspPI GGATC 1 cut(s) 900
BspTNI GGTCTC 1 cut(s) 198
BsrBI CCGCTC 2 cut(s) 331, 565
BsrDI GCAATG 1 cut(s) 132
BsrFI RCCGGY 1 cut(s) 132
BsrGI TGTACA 1 cut(s) 165
BsrI ACTGG 2 cut(s) 526, 1066
BssAI RCCGGY 1 cut(s) 132
BssECI CCNNGG 2 cut(s) 308, 996
BssMI GATC 2 cut(s) 873, 905
Bst4CI ACNGT 5 cut(s) 281, 630, 723, 742, 801
BstAPI GCANNNNNTGC 1 cut(s) 824
BstAUI TGTACA 1 cut(s) 165
BstC8I GCNNGC 2 cut(s) 893, 962
BstDEI CTNAG 2 cut(s) 561, 887
BstF5I GGATG 4 cut(s) 255, 318, 361, 511
BstKTI GATC 2 cut(s) 876, 908
BstMAI GTCTC 2 cut(s) 46, 198
BstMBI GATC 2 cut(s) 873, 905
BstMWI GCNNNNNNNGC 2 cut(s) 409, 824
BstNSI RCATGY 3 cut(s) 9, 403, 784
BstSCI CCNGG 3 cut(s) 308, 995, 996
BstSFI CTRYAG 2 cut(s) 226, 350
BstV1I GCAGC 1 cut(s) 240
BstXI CCANNNNNNTGG 2 cut(s) 215, 1061
BsuI GTATCC 1 cut(s) 37
BsuRI GGCC 4 cut(s) 194, 499, 559, 1093
BtrI CACGTC 1 cut(s) 40
BtsCI GGATG 4 cut(s) 255, 318, 361, 511
BtsIMutI CAGTG 1 cut(s) 738
Cac8I GCNNGC 2 cut(s) 893, 962
CciI TCATGA 1 cut(s) 672
Cfr10I RCCGGY 1 cut(s) 132
Cfr13I GGNCC 3 cut(s) 346, 497, 1092
Cfr9I CCCGGG 1 cut(s) 996
CseI GACGC 1 cut(s) 516
Csp6I GTAC 5 cut(s) 115, 166, 583, 865, 916
CspCI CAANNNNNGTGG 2 cut(s) 386, 421
CviAII CATG 6 cut(s) 6, 400, 440, 673, 781, 967
CviQI GTAC 5 cut(s) 115, 166, 583, 865, 916
DdeI CTNAG 2 cut(s) 561, 887
DpnI GATC 2 cut(s) 875, 907
DpnII GATC 2 cut(s) 873, 905
DraIII CACNNNGTG 1 cut(s) 824
EciI GGCGGA 1 cut(s) 203
Eco147I AGGCCT 2 cut(s) 194, 559
Eco31I GGTCTC 1 cut(s) 198
Eco47I GGWCC 1 cut(s) 346
Eco88I CYCGRG 1 cut(s) 996
EcoO109I RGGNCCY 2 cut(s) 346, 1092
EcoRI GAATTC 1 cut(s) 645
EcoT22I ATGCAT 1 cut(s) 255
FaeI CATG 6 cut(s) 9, 403, 443, 676, 784, 970
FatI CATG 6 cut(s) 5, 399, 439, 672, 780, 966
Fnu4HI GCNGC 2 cut(s) 229, 1041
FokI GGATG 4 cut(s) 262, 325, 368, 498
Fsp4HI GCNGC 2 cut(s) 229, 1041
FspBI CTAG 1 cut(s) 159
GluI GCNGC 2 cut(s) 229, 1041
GsaI CCCAGC 1 cut(s) 1020
HaeIII GGCC 4 cut(s) 194, 499, 559, 1093
HapII CCGG 4 cut(s) 133, 310, 765, 997
HgaI GACGC 1 cut(s) 516
Hin1II CATG 6 cut(s) 9, 403, 443, 676, 784, 970
HinfI GANTC 6 cut(s) 222, 479, 635, 704, 976, 1049
HpaII CCGG 4 cut(s) 133, 310, 765, 997
HphI GGTGA 6 cut(s) 166, 427, 724, 818, 935, 974
Hpy166II GTNNAC 2 cut(s) 435, 726
Hpy188I TCNGA 3 cut(s) 640, 878, 888
Hpy188III TCNNGA 6 cut(s) 11, 203, 263, 673, 854, 1070
Hpy8I GTNNAC 2 cut(s) 435, 726
HpyAV CCTTC 2 cut(s) 263, 549
HpyCH4III ACNGT 5 cut(s) 281, 630, 723, 742, 801
HpyCH4IV ACGT 2 cut(s) 39, 175
HpyCH4V TGCA 7 cut(s) 228, 253, 412, 547, 624, 790, 797
HpyF10VI GCNNNNNNNGC 2 cut(s) 409, 824
HpyF3I CTNAG 2 cut(s) 561, 887
HpySE526I ACGT 2 cut(s) 39, 175
Hsp92II CATG 6 cut(s) 9, 403, 443, 676, 784, 970
Kzo9I GATC 2 cut(s) 873, 905
LmnI GCTCC 2 cut(s) 393, 463
Lsp1109I GCAGC 1 cut(s) 240
LweI GCATC 3 cut(s) 240, 534, 675
MaeI CTAG 1 cut(s) 159
MaeII ACGT 2 cut(s) 39, 175
MaeIII GTNAC 4 cut(s) 154, 242, 656, 776
MalI GATC 2 cut(s) 875, 907
MbiI CCGCTC 2 cut(s) 331, 565
MboI GATC 2 cut(s) 873, 905
MboII GAAGA 2 cut(s) 278, 1001
MfeI CAATTG 1 cut(s) 324
MluCI AATT 7 cut(s) 324, 472, 645, 677, 809, 970, 1056
MlyI GAGTC 4 cut(s) 488, 644, 970, 1043
MmeI TCCRAC 1 cut(s) 629
Mph1103I ATGCAT 1 cut(s) 255
MroXI GAANNNNTTC 1 cut(s) 431
MseI TTAA 3 cut(s) 455, 471, 744
MslI CAYNNNNRTG 2 cut(s) 613, 785
MspA1I CMGCKG 2 cut(s) 895, 921
MspI CCGG 4 cut(s) 133, 310, 765, 997
MspR9I CCNGG 3 cut(s) 310, 997, 998
MunI CAATTG 1 cut(s) 324
MwoI GCNNNNNNNGC 2 cut(s) 409, 824
NciI CCSGG 3 cut(s) 310, 997, 998
NdeII GATC 2 cut(s) 873, 905
NlaIII CATG 6 cut(s) 9, 403, 443, 676, 784, 970
NlaIV GGNNCC 1 cut(s) 395
NmuCI GTSAC 3 cut(s) 154, 242, 656
NsiI ATGCAT 1 cut(s) 255
NspI RCATGY 3 cut(s) 9, 403, 784
PagI TCATGA 1 cut(s) 672
PceI AGGCCT 2 cut(s) 194, 559
PciI ACATGT 1 cut(s) 780
PdmI GAANNNNTTC 1 cut(s) 431
PfeI GAWTC 2 cut(s) 222, 704
PflMI CCANNNNNTGG 1 cut(s) 521
PkrI GCNGC 2 cut(s) 230, 1042
PleI GAGTC 4 cut(s) 487, 643, 970, 1043
PpsI GAGTC 4 cut(s) 487, 643, 970, 1043
PpuMI RGGWCCY 1 cut(s) 346
PscI ACATGT 1 cut(s) 780
PshBI ATTAAT 1 cut(s) 471
Psp5II RGGWCCY 1 cut(s) 346
PspFI CCCAGC 1 cut(s) 1016
PspN4I GGNNCC 1 cut(s) 395
PspPI GGNCC 3 cut(s) 346, 497, 1092
PspPPI RGGWCCY 1 cut(s) 346
PstI CTGCAG 1 cut(s) 230
PvuII CAGCTG 1 cut(s) 895
RsaI GTAC 5 cut(s) 116, 167, 584, 866, 917
RsaNI GTAC 5 cut(s) 115, 166, 583, 865, 916
RseI CAYNNNNRTG 2 cut(s) 613, 785
SaqAI TTAA 3 cut(s) 455, 471, 744
SatI GCNGC 2 cut(s) 229, 1041
Sau3AI GATC 2 cut(s) 873, 905
Sau96I GGNCC 3 cut(s) 346, 497, 1092
ScaI AGTACT 1 cut(s) 116
SchI GAGTC 4 cut(s) 488, 644, 970, 1043
ScrFI CCNGG 3 cut(s) 310, 997, 998
SfaNI GCATC 3 cut(s) 240, 534, 675
SfcI CTRYAG 2 cut(s) 226, 350
SinI GGWCC 1 cut(s) 346
SmaI CCCGGG 1 cut(s) 998
SmiMI CAYNNNNRTG 2 cut(s) 613, 785
SpeI ACTAGT 1 cut(s) 158
SrfI GCCCGGGC 1 cut(s) 998
Sse9I AATT 7 cut(s) 324, 472, 645, 677, 809, 970, 1056
SseBI AGGCCT 2 cut(s) 194, 559
SsiI CCGC 5 cut(s) 188, 331, 565, 921, 1041
SspMI CTAG 1 cut(s) 159
StuI AGGCCT 2 cut(s) 194, 559
StyD4I CCNGG 3 cut(s) 308, 995, 996
TaaI ACNGT 5 cut(s) 281, 630, 723, 742, 801
TaiI ACGT 2 cut(s) 42, 178
TaqI TCGA 4 cut(s) 202, 633, 758, 987
TasI AATT 7 cut(s) 324, 472, 645, 677, 809, 970, 1056
TatI WGTACW 3 cut(s) 114, 165, 915
TauI GCSGC 1 cut(s) 1043
TfiI GAWTC 2 cut(s) 222, 704
Tru1I TTAA 3 cut(s) 455, 471, 744
Tru9I TTAA 3 cut(s) 455, 471, 744
TscAI CASTG 1 cut(s) 745
TseFI GTSAC 3 cut(s) 154, 242, 656
TseI GCWGC 1 cut(s) 228
Tsp45I GTSAC 3 cut(s) 154, 242, 656
TspDTI ATGAA 6 cut(s) 143, 162, 500, 609, 689, 983
TspGWI ACGGA 1 cut(s) 938
TspMI CCCGGG 1 cut(s) 996
TspRI CASTG 1 cut(s) 745
Van91I CCANNNNNTGG 1 cut(s) 521
VpaK11BI GGWCC 1 cut(s) 346
VspI ATTAAT 1 cut(s) 471
XapI RAATTY 3 cut(s) 645, 677, 970
XceI RCATGY 3 cut(s) 9, 403, 784
XmaI CCCGGG 1 cut(s) 996
XmnI GAANNNNTTC 1 cut(s) 431
XspI CTAG 1 cut(s) 159
ZrmI AGTACT 1 cut(s) 116
Zsp2I ATGCAT 1 cut(s) 255
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.