Rorug06G0184200

Protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000074
Physical Location & Seq
Reverse (-)
29204768 .. 29207780
3013 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0184200.1

Sequence Viewer

Length: 2499 bp
ATGCCGATCAAATTCCGGCTTGTGCTCCTCCCTCTCTTCTGTCTTTTGTCCCAAACCATCTGGGCCGCCACAATTCCACCCGGCTCTTCTCTCCTTGCTTCTAATCCTAACCAAACCTGGTCTTCCCCAGACAGCACCTTCTCTTTTGGCTTCATTCCCTCTGACCCACCCACCTCACCCCCTTCTTTCACCGCCGCCATAACCTACTCCGGCGGCGTCCCCATCTGGTCTCCCGGCCGCAGCGTTGACTCCGCCGGGGCCCTCCACTTCCTCTCATCCGGCGCCCTCCGCCTCGTCGACGGCTCCAACAAAACCATATGGGACTCCGACACCGCCAGCCGCGGCGTCTCCTCCGCTGAGCTCGAAGGTTCCGGCAACCTGGTGCTCCGGAACGGCACCGGTGCTGCGGTCTGGTCCAGCTTCGACAACCCGACGGACACGATCGTGCCGTCGCAGAACTTCACTGTGGGTAAGGTTTTGCGATCTGGTATGTACTCGTTTGAGCTCGTCAAGAATGGGAATCTGACTCTGTTGTGGAACGATAGTATTGTGTATTGGAATCAAGGGTTGAACTCGTCTGTTACTAACAACAACCCCAATTTGACTTCACCTACTTTAGGATTGCAGTCTATTGGTATTCTGACCATTTCTGATCCAAAGTTGCCCACTGCTGCTATTGTTGCTTATAGTAATGATTATGCTGAGGCTGGTGATATTTTGAGGTTCTTGAAGCTAGAGAGTGATGGGAATGTGAGGATTTATAGCACTAGTAAAGGTAGCGGGGGTAAAATTGAGAGATGGGCAGCTGTTACTGATCAGTGTCAGGTGTTTGGCTACTGTGGGAACATGGGAATTTGCAGTTATAATGATTCCAATCCCATATGCGGCTGCCCTTCTCTTAATTTCGAGCCAGTTGATCCCAAAGATAGCAAGCAAGGGTGTAGGAGGAAGATGGAGATTAAGGACTGTCCTCAGAGTGTGACTATGTTGGATTTGGGTCATACTAGGTTCTTGACCTACCCTCCTGAGACGGATTCACAGATTTTCTTTGTGGGTATATCAGCCTGTAGGTTAAACTGTCTTGTTAATGATCCTTGTGATGCTTCAACATCTTTGTCTGATGGCACAGGGCTCTGTTACTACAAGACACCCGGTTTTCTCAGCGGGTATCACACTCCAGCTCTGACTAGCAGTTCATATATCAAGGTTTGTGGACCGGTGATTCCAAATCCGCCCTCTTCGTTGGATAGTGCTGGCAAGAAAAAGGATTGGAAGATGAGGGCTTGGATAGTGGTTCTTGTGGTTGTCGCTTCCCTTTTGGGTTTGATGGCACTGGAGGGTGGTCTGTGGTGGTGGTTTTGCAGGAACAGTCCAAGCTTTGGTGCATTGTCTGCTCAGTATGCTCTTCTTGAGTATGCTTCTGGTGCGCCAGTTCAGTTTTCGTACAAAGAACTCCAGCGCTCTACCAAGGGATTCAAGGAGAAGCTCGGAGCCGGAGGATTTGGAGCTGTTTATAAGGGCATTCTTGCTAATAGAACTGTTGTTGCAGTGAAGCAACTCGAGGGGATTGAGCAAGGAGAAAAGCAGTTTAGGATGGAGGTTGCAACAATTAGTAGCACCCATCATTTAAATCTAGTGAGGCTGATTGGTTTCTGCTCTGAGGGCCGTCATAGGCTTTTAGTATATGAGTTCATGAAAAATGGGTCCCTTGATGATTTCCTTTTTGCCACAGAAGAGCAGTCAGGAAAATTCTTAAGTTGGGAGAATCGATTCAAGATTGCCCTTGGCACTGCAAGGGGGATCACATACCTTCACGAGGAGTGCCGAGACTGCATTGTGCATTGTGATATAAAACCAGAGAACATTCTCTTGGATGAGAATTACAATTCCAAAGTATCTGATTTTGGCCTCGCTAAGCTTGTTAATCCAAAGGACCACAGGTACCGAACTTTGACCAGTGTTAGAGGGACTAGAGGTTATTTGGCACCAGAATGGTTGGCAAATCTGCCAATAACTTCCAAATCTGATATTTATAGTTATGGTATGGTTCTGTTAGAGATAGTTAGTGGGAGAAGGAATTTTGAAGTTTCTGAAGAGACAGATAGGAAAAAGTTCTCCATATGGGCCTTTGGCGAATTTGAGAAGGGTAATATCAAGGGAATCATTGATAAAAGGCTAGCTGACCAAGATGTTGATATGGATCAAGTGATGAGAGCAATTCAGGTGACGTTCTGGTGCATACAAGAGCAGCCATCTCATAGGCCAATGATGGGAAAAGTTGTACAAATGCTGGAAGGAATTACAGAGATGGGGAAACCCCCATCTCCAAGGGCTATCATTGAAGGGCCTATAATTGAAAGGCCTGTTAGTGGAACCAGCACTAGTCTTGTAGCCCCCTCCTCATTTTCATCATTTCAAATTTCAGAAGTATCGCCTTCTGCACCAGCTAGGAACATGGAGACAGCGACTGCATCCCTTATACAGTCAGACCTGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

832

Amino Acids

91.02

Weight (kDa)

6.42

Isoelectric Point (pI)

38.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 83 - 158 2.2e-13 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 492 - 764 1.4e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 493 - 762 2.3e-50 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 864, 1515
Acc65I GGTACC 1 cut(s) 1941
AccB1I GGYRCC 4 cut(s) 281, 395, 1941, 1984
AccB7I CCANNNNNTGG 1 cut(s) 1379
AccI GTMKAC 1 cut(s) 297
AccII CGCG 1 cut(s) 342
AccIII TCCGGA 1 cut(s) 387
AclWI GGATC 5 cut(s) 647, 911, 1085, 1808, 2208
AcoI YGGCCR 1 cut(s) 235
AcsI RAATTY 6 cut(s) 11, 852, 1748, 2077, 2135, 2418
AcuI CTGAAG 1 cut(s) 2112
AcyI GRCGYC 3 cut(s) 216, 282, 345
AfaI GTAC 4 cut(s) 494, 1445, 1943, 2283
AfeI AGCGCT 1 cut(s) 1460
AfiI CCNNNNNNNGG 6 cut(s) 617, 884, 1379, 1816, 2270, 2369
AflII CTTAAG 1 cut(s) 1753
AgeI ACCGGT 2 cut(s) 398, 1216
AgsI TTSAA 9 cut(s) 571, 730, 1107, 1477, 1774, 2084, 2342, 2357, 2417
AhlI ACTAGT 2 cut(s) 767, 2381
AjnI CCWGG 2 cut(s) 116, 378
AjuI GAANNNNNNNTTGG 2 cut(s) 1853, 1885
AleI CACNNNNGTG 1 cut(s) 443
Alw21I GWGCWC 4 cut(s) 27, 363, 387, 507
Alw26I GTCTC 6 cut(s) 234, 352, 1022, 1821, 2090, 2453
AlwI GGATC 5 cut(s) 647, 911, 1085, 1808, 2208
AlwNI CAGNNNCTG 1 cut(s) 2468
Ama87I CYCGRG 1 cut(s) 1559
Aor13HI TCCGGA 1 cut(s) 387
Aor51HI AGCGCT 1 cut(s) 1460
AoxI GGCC 9 cut(s) 63, 235, 258, 1663, 1906, 2124, 2261, 2345, 2360
ApaI GGGCCC 1 cut(s) 262
ApeKI GCWGC 6 cut(s) 240, 404, 671, 803, 888, 2248
ApoI RAATTY 6 cut(s) 11, 852, 1748, 2077, 2135, 2418
AsiGI ACCGGT 2 cut(s) 398, 1216
Asp700I GAANNNNTTC 2 cut(s) 1769, 2111
Asp718I GGTACC 1 cut(s) 1941
AspLEI GCGC 3 cut(s) 284, 1429, 1461
AsuC2I CCSGG 4 cut(s) 81, 234, 256, 1152
AsuHPI GGTGA 6 cut(s) 168, 181, 600, 722, 1231, 2236
AsuNHI GCTAGC 1 cut(s) 2176
AvaI CYCGRG 1 cut(s) 1559
AvaII GGWCC 4 cut(s) 414, 1214, 1704, 1933
BaeGI GKGCMC 1 cut(s) 262
BanI GGYRCC 4 cut(s) 281, 395, 1941, 1984
BanII GRGCYC 4 cut(s) 262, 363, 507, 1134
BauI CACGAG 1 cut(s) 1814
BbsI GAAGAC 1 cut(s) 114
Bbv12I GWGCWC 4 cut(s) 27, 363, 387, 507
BbvCI CCTCAGC 1 cut(s) 702
BbvI GCAGC 6 cut(s) 252, 391, 658, 815, 875, 2260
BceAI ACGGC 4 cut(s) 316, 409, 433, 1650
BciT130I CCWGG 2 cut(s) 118, 380
BclI TGATCA 1 cut(s) 814
BcnI CCSGG 4 cut(s) 81, 234, 256, 1152
BcoDI GTCTC 6 cut(s) 234, 352, 1022, 1821, 2090, 2453
BcuI ACTAGT 2 cut(s) 767, 2381
BfaI CTAG 9 cut(s) 734, 768, 1005, 1188, 1634, 1971, 2177, 2382, 2448
BfmI CTRYAG 1 cut(s) 1066
BfoI RGCGCY 2 cut(s) 285, 1462
BfrI CTTAAG 1 cut(s) 1753
BlpI GCTNAGC 2 cut(s) 357, 1914
Bme1390I CCNGG 6 cut(s) 81, 118, 234, 256, 380, 1152
Bme18I GGWCC 4 cut(s) 414, 1214, 1704, 1933
BmeT110I CYCGRG 1 cut(s) 1559
BmrFI CCNGG 6 cut(s) 81, 118, 234, 256, 380, 1152
BmsI GCATC 2 cut(s) 1090, 2480
BmtI GCTAGC 1 cut(s) 2180
BpiI GAAGAC 1 cut(s) 114
BpmI CTGGAG 3 cut(s) 1161, 1355, 1439
Bpu10I CCTNAGC 1 cut(s) 702
Bpu1102I GCTNAGC 2 cut(s) 357, 1914
BpuEI CTTGAG 1 cut(s) 1430
BpuMI CCSGG 4 cut(s) 81, 234, 256, 1152
Bsa29I ATCGAT 1 cut(s) 1768
BsaBI GATNNNNATC 2 cut(s) 873, 2199
BsaHI GRCGYC 3 cut(s) 216, 282, 345
BsaI GGTCTC 1 cut(s) 234
BsaJI CCNNGG 5 cut(s) 255, 340, 1467, 1783, 2327
BsaWI WCCGGW 3 cut(s) 387, 398, 1216
BsaXI ACNNNNNCTCC 2 cut(s) 1006, 1036
Bsc4I CCNNNNNNNGG 6 cut(s) 617, 884, 1379, 1816, 2270, 2369
Bse118I RCCGGY 2 cut(s) 398, 1216
Bse1I ACTGG 4 cut(s) 911, 1338, 1430, 1956
Bse8I GATNNNNATC 2 cut(s) 873, 2199
BseAI TCCGGA 1 cut(s) 387
BseBI CCWGG 2 cut(s) 118, 380
BseCI ATCGAT 1 cut(s) 1768
BseDI CCNNGG 5 cut(s) 255, 340, 1467, 1783, 2327
BseGI GGATG 4 cut(s) 275, 1599, 1879, 2471
BseJI GATNNNNATC 2 cut(s) 873, 2199
BseLI CCNNNNNNNGG 6 cut(s) 617, 884, 1379, 1816, 2270, 2369
BseMII CTCAG 8 cut(s) 348, 693, 986, 1017, 1174, 1409, 1650, 2483
BseNI ACTGG 4 cut(s) 911, 1338, 1430, 1956
BseRI GAGGAG 4 cut(s) 17, 340, 1832, 2389
BseSI GKGCMC 1 cut(s) 262
BseX3I CGGCCG 1 cut(s) 235
BseXI GCAGC 6 cut(s) 252, 391, 658, 815, 875, 2260
BsgI GTGCAG 1 cut(s) 2424
Bsh1236I CGCG 1 cut(s) 342
Bsh1285I CGRYCG 2 cut(s) 238, 444
BshFI GGCC 9 cut(s) 65, 237, 260, 1665, 1908, 2126, 2263, 2347, 2362
BshNI GGYRCC 4 cut(s) 281, 395, 1941, 1984
BshTI ACCGGT 2 cut(s) 398, 1216
BshVI ATCGAT 1 cut(s) 1768
BsiEI CGRYCG 2 cut(s) 238, 444
BsiHKAI GWGCWC 4 cut(s) 27, 363, 387, 507
BsiHKCI CYCGRG 1 cut(s) 1559
BslFI GGGAC 5 cut(s) 34, 203, 335, 1690, 1981
BslI CCNNNNNNNGG 6 cut(s) 617, 884, 1379, 1816, 2270, 2369
BsmAI GTCTC 6 cut(s) 234, 352, 1022, 1821, 2090, 2453
BsmBI CGTCTC 2 cut(s) 352, 1022
BsmFI GGGAC 5 cut(s) 34, 203, 335, 1690, 1981
BsmI GAATGC 1 cut(s) 1521
BsnI GGCC 9 cut(s) 65, 237, 260, 1665, 1908, 2126, 2263, 2347, 2362
Bso31I GGTCTC 1 cut(s) 234
BsoBI CYCGRG 1 cut(s) 1559
Bsp120I GGGCCC 1 cut(s) 258
Bsp1286I GDGCHC 6 cut(s) 27, 262, 363, 387, 507, 1134
Bsp13I TCCGGA 1 cut(s) 387
Bsp1407I TGTACA 1 cut(s) 2281
Bsp143I GATC 9 cut(s) 6, 441, 482, 652, 814, 916, 1090, 1800, 2200
Bsp1720I GCTNAGC 2 cut(s) 357, 1914
BspANI GGCC 9 cut(s) 65, 237, 260, 1665, 1908, 2126, 2263, 2347, 2362
BspCNI CTCAG 8 cut(s) 349, 694, 985, 1018, 1173, 1408, 1651, 2484
BspDI ATCGAT 1 cut(s) 1768
BspEI TCCGGA 1 cut(s) 387
BspFNI CGCG 1 cut(s) 342
BspHI TCATGA 1 cut(s) 1692
BspOI GCTAGC 1 cut(s) 2180
BspPI GGATC 5 cut(s) 647, 911, 1085, 1808, 2208
BspQI GCTCTTC 3 cut(s) 91, 1410, 1728
BspT107I GGYRCC 4 cut(s) 281, 395, 1941, 1984
BspTI CTTAAG 1 cut(s) 1753
BspTNI GGTCTC 1 cut(s) 234
BsrFI RCCGGY 2 cut(s) 398, 1216
BsrGI TGTACA 1 cut(s) 2281
BsrI ACTGG 4 cut(s) 911, 1338, 1430, 1956
BssAI RCCGGY 2 cut(s) 398, 1216
BssECI CCNNGG 5 cut(s) 255, 340, 1467, 1783, 2327
BssMI GATC 9 cut(s) 6, 441, 482, 652, 814, 916, 1090, 1800, 2200
BssNI GRCGYC 3 cut(s) 216, 282, 345
BssSI CACGAG 1 cut(s) 1814
BssT1I CCWWGG 3 cut(s) 1467, 1783, 2327
Bst2BI CACGAG 1 cut(s) 1814
Bst2UI CCWGG 2 cut(s) 118, 380
Bst4CI ACNGT 7 cut(s) 466, 839, 968, 1079, 1370, 1540, 2484
Bst6I CTCTTC 6 cut(s) 41, 91, 1243, 1410, 1728, 2088
BstACI GRCGYC 3 cut(s) 216, 282, 345
BstAFI CTTAAG 1 cut(s) 1753
BstAPI GCANNNNNTGC 1 cut(s) 1391
BstAUI TGTACA 1 cut(s) 2281
BstC8I GCNNGC 4 cut(s) 337, 932, 1255, 2178
BstDEI CTNAG 9 cut(s) 357, 702, 972, 1026, 1160, 1395, 1659, 1914, 2492
BstDSI CCRYGG 1 cut(s) 340
BstENI CCTNNNNNAGG 2 cut(s) 615, 1814
BstF5I GGATG 4 cut(s) 275, 1599, 1879, 2471
BstFNI CGCG 1 cut(s) 342
BstH2I RGCGCY 2 cut(s) 285, 1462
BstHHI GCGC 3 cut(s) 284, 1429, 1461
BstKTI GATC 9 cut(s) 9, 444, 485, 655, 817, 919, 1093, 1803, 2203
BstMAI GTCTC 6 cut(s) 234, 352, 1022, 1821, 2090, 2453
BstMBI GATC 9 cut(s) 6, 441, 482, 652, 814, 916, 1090, 1800, 2200
BstMCI CGRYCG 2 cut(s) 238, 444
BstMWI GCNNNNNNNGC 7 cut(s) 288, 680, 1391, 1400, 1424, 1662, 1830
BstNI CCWGG 2 cut(s) 118, 380
BstSCI CCNGG 6 cut(s) 79, 116, 232, 254, 378, 1150
BstSFI CTRYAG 1 cut(s) 1066
BstSLI GKGCMC 1 cut(s) 262
BstUI CGCG 1 cut(s) 342
BstV1I GCAGC 6 cut(s) 252, 391, 658, 815, 875, 2260
BstV2I GAAGAC 1 cut(s) 114
BstZI CGGCCG 1 cut(s) 235
Bsu15I ATCGAT 1 cut(s) 1768
BsuRI GGCC 9 cut(s) 65, 237, 260, 1665, 1908, 2126, 2263, 2347, 2362
BsuTUI ATCGAT 1 cut(s) 1768
BtgI CCRYGG 1 cut(s) 340
BtsCI GGATG 4 cut(s) 275, 1599, 1879, 2471
BtsI GCAGTG 3 cut(s) 666, 1554, 1788
BtsIMutI CAGTG 7 cut(s) 462, 666, 824, 1331, 1554, 1788, 1963
Cac8I GCNNGC 4 cut(s) 337, 932, 1255, 2178
CaiI CAGNNNCTG 1 cut(s) 2468
CciI TCATGA 1 cut(s) 1692
CfoI GCGC 3 cut(s) 284, 1429, 1461
Cfr10I RCCGGY 2 cut(s) 398, 1216
Cfr42I CCGCGG 1 cut(s) 343
ClaI ATCGAT 1 cut(s) 1768
CseI GACGC 2 cut(s) 205, 334
CsiI ACCWGGT 2 cut(s) 116, 378
Csp6I GTAC 4 cut(s) 493, 1444, 1942, 2282
CspAI ACCGGT 2 cut(s) 398, 1216
CspCI CAANNNNNGTGG 2 cut(s) 1192, 1227
CviAII CATG 3 cut(s) 847, 1693, 2455
CviQI GTAC 4 cut(s) 493, 1444, 1942, 2282
DdeI CTNAG 9 cut(s) 357, 702, 972, 1026, 1160, 1395, 1659, 1914, 2492
DinI GGCGCC 1 cut(s) 283
DpnI GATC 9 cut(s) 8, 443, 484, 654, 816, 918, 1092, 1802, 2202
DpnII GATC 9 cut(s) 6, 441, 482, 652, 814, 916, 1090, 1800, 2200
DraI TTTAAA 1 cut(s) 1629
EaeI YGGCCR 1 cut(s) 235
EagI CGGCCG 1 cut(s) 235
Eam1104I CTCTTC 6 cut(s) 41, 91, 1243, 1410, 1728, 2088
EarI CTCTTC 6 cut(s) 41, 91, 1243, 1410, 1728, 2088
EciI GGCGGA 3 cut(s) 241, 278, 1221
Ecl136II GAGCTC 2 cut(s) 361, 505
EclXI CGGCCG 1 cut(s) 235
Eco130I CCWWGG 3 cut(s) 1467, 1783, 2327
Eco147I AGGCCT 1 cut(s) 2362
Eco24I GRGCYC 4 cut(s) 262, 363, 507, 1134
Eco31I GGTCTC 1 cut(s) 234
Eco47I GGWCC 4 cut(s) 414, 1214, 1704, 1933
Eco47III AGCGCT 1 cut(s) 1460
Eco52I CGGCCG 1 cut(s) 235
Eco53kI GAGCTC 2 cut(s) 361, 505
Eco57I CTGAAG 1 cut(s) 2112
Eco88I CYCGRG 1 cut(s) 1559
EcoICRI GAGCTC 2 cut(s) 361, 505
EcoNI CCTNNNNNAGG 2 cut(s) 615, 1814
EcoO109I RGGNCCY 4 cut(s) 258, 259, 1704, 2345
EcoRII CCWGG 2 cut(s) 116, 378
EcoT14I CCWWGG 3 cut(s) 1467, 1783, 2327
EcoT38I GRGCYC 4 cut(s) 262, 363, 507, 1134
EgeI GGCGCC 1 cut(s) 283
EheI GGCGCC 1 cut(s) 283
ErhI CCWWGG 3 cut(s) 1467, 1783, 2327
Esp3I CGTCTC 2 cut(s) 352, 1022
FaeI CATG 3 cut(s) 850, 1696, 2458
FaqI GGGAC 5 cut(s) 34, 203, 335, 1690, 1981
FatI CATG 3 cut(s) 846, 1692, 2454
FauI CCCGC 2 cut(s) 773, 1157
FauNDI CATATG 3 cut(s) 317, 881, 2120
FbaI TGATCA 1 cut(s) 814
FblI GTMKAC 1 cut(s) 297
FokI GGATG 4 cut(s) 262, 1606, 1886, 2458
FriOI GRGCYC 4 cut(s) 262, 363, 507, 1134
FspBI CTAG 9 cut(s) 734, 768, 1005, 1188, 1634, 1971, 2177, 2382, 2448
GlaI GCGC 3 cut(s) 283, 1428, 1460
GsuI CTGGAG 3 cut(s) 1161, 1355, 1439
HaeII RGCGCY 2 cut(s) 285, 1462
HaeIII GGCC 9 cut(s) 65, 237, 260, 1665, 1908, 2126, 2263, 2347, 2362
HgaI GACGC 2 cut(s) 205, 334
HhaI GCGC 3 cut(s) 284, 1429, 1461
Hin1I GRCGYC 3 cut(s) 216, 282, 345
Hin1II CATG 3 cut(s) 850, 1696, 2458
Hin6I GCGC 3 cut(s) 282, 1427, 1459
HinP1I GCGC 3 cut(s) 282, 1427, 1459
HincII GTYRAC 2 cut(s) 247, 298
HindII GTYRAC 2 cut(s) 247, 298
HindIII AAGCTT 2 cut(s) 1375, 1916
HphI GGTGA 6 cut(s) 168, 181, 600, 722, 1231, 2236
Hpy166II GTNNAC 3 cut(s) 247, 298, 1214
Hpy8I GTNNAC 3 cut(s) 247, 298, 1214
Hpy99I CGWCG 4 cut(s) 299, 302, 436, 454
HpyCH4III ACNGT 7 cut(s) 466, 839, 968, 1079, 1370, 1540, 2484
HpyCH4IV ACGT 1 cut(s) 2228
HpyF10VI GCNNNNNNNGC 7 cut(s) 288, 680, 1391, 1400, 1424, 1662, 1830
HpyF3I CTNAG 9 cut(s) 357, 702, 972, 1026, 1160, 1395, 1659, 1914, 2492
HpySE526I ACGT 1 cut(s) 2228
Hsp92I GRCGYC 3 cut(s) 216, 282, 345
Hsp92II CATG 3 cut(s) 850, 1696, 2458
HspAI GCGC 3 cut(s) 282, 1427, 1459
KasI GGCGCC 1 cut(s) 281
KflI GGGWCCC 1 cut(s) 1704
Kpn2I TCCGGA 1 cut(s) 387
KpnI GGTACC 1 cut(s) 1945
Ksp22I TGATCA 1 cut(s) 814
KspI CCGCGG 1 cut(s) 343
Kzo9I GATC 9 cut(s) 6, 441, 482, 652, 814, 916, 1090, 1800, 2200
LguI GCTCTTC 3 cut(s) 91, 1410, 1728
LmnI GCTCC 5 cut(s) 30, 308, 390, 1490, 1505
Lsp1109I GCAGC 6 cut(s) 252, 391, 658, 815, 875, 2260
LweI GCATC 2 cut(s) 1090, 2480
MabI ACCWGGT 2 cut(s) 116, 378
MaeI CTAG 9 cut(s) 734, 768, 1005, 1188, 1634, 1971, 2177, 2382, 2448
MaeII ACGT 1 cut(s) 2228
MaeIII GTNAC 5 cut(s) 580, 808, 979, 1136, 2224
MalI GATC 9 cut(s) 8, 443, 484, 654, 816, 918, 1092, 1802, 2202
MboI GATC 9 cut(s) 6, 441, 482, 652, 814, 916, 1090, 1800, 2200
MboII GAAGA 9 cut(s) 28, 78, 114, 961, 1230, 1285, 1397, 1745, 2105
MhlI GDGCHC 6 cut(s) 27, 262, 363, 387, 507, 1134
Mly113I GGCGCC 1 cut(s) 282
MlyI GAGTC 3 cut(s) 242, 317, 520
MmeI TCCRAC 4 cut(s) 330, 351, 969, 1224
MroI TCCGGA 1 cut(s) 387
MroXI GAANNNNTTC 2 cut(s) 1769, 2111
MseI TTAA 7 cut(s) 900, 960, 1073, 1086, 1628, 1754, 1923
MslI CAYNNNNRTG 2 cut(s) 443, 1990
MspA1I CMGCKG 4 cut(s) 342, 356, 806, 1164
MspCI CTTAAG 1 cut(s) 1753
MspR9I CCNGG 6 cut(s) 81, 118, 234, 256, 380, 1152
Mva1269I GAATGC 1 cut(s) 1521
MvaI CCWGG 2 cut(s) 118, 380
MvnI CGCG 1 cut(s) 342
MwoI GCNNNNNNNGC 7 cut(s) 288, 680, 1391, 1400, 1424, 1662, 1830
NarI GGCGCC 1 cut(s) 282
NciI CCSGG 4 cut(s) 81, 234, 256, 1152
NdeI CATATG 3 cut(s) 317, 881, 2120
NdeII GATC 9 cut(s) 6, 441, 482, 652, 814, 916, 1090, 1800, 2200
NheI GCTAGC 1 cut(s) 2176
NlaIII CATG 3 cut(s) 850, 1696, 2458
NmeAIII GCCGAG 1 cut(s) 1850
NmuCI GTSAC 2 cut(s) 979, 2224
OliI CACNNNNGTG 1 cut(s) 443
PaeR7I CTCGAG 1 cut(s) 1559
PagI TCATGA 1 cut(s) 1692
PceI AGGCCT 1 cut(s) 2362
PciSI GCTCTTC 3 cut(s) 91, 1410, 1728
PcsI WCGNNNNNNNCGW 1 cut(s) 446
PctI GAATGC 1 cut(s) 1521
PdmI GAANNNNTTC 2 cut(s) 1769, 2111
PfeI GAWTC 9 cut(s) 520, 559, 869, 1034, 1222, 1473, 1765, 1770, 2160
PflMI CCANNNNNTGG 1 cut(s) 1379
PinAI ACCGGT 2 cut(s) 398, 1216
Ple19I CGATCG 1 cut(s) 444
PleI GAGTC 3 cut(s) 242, 317, 520
PluTI GGCGCC 1 cut(s) 285
PpsI GAGTC 3 cut(s) 242, 317, 520
PpuMI RGGWCCY 1 cut(s) 1704
PsiI TTATAA 2 cut(s) 864, 1515
Psp124BI GAGCTC 2 cut(s) 363, 507
Psp5II RGGWCCY 1 cut(s) 1704
Psp6I CCWGG 2 cut(s) 116, 378
PspGI CCWGG 2 cut(s) 116, 378
PspOMI GGGCCC 1 cut(s) 258
PspPPI RGGWCCY 1 cut(s) 1704
PspXI VCTCGAGB 1 cut(s) 1559
PstNI CAGNNNCTG 1 cut(s) 2468
PvuI CGATCG 1 cut(s) 444
PvuII CAGCTG 1 cut(s) 806
RsaI GTAC 4 cut(s) 494, 1445, 1943, 2283
RsaNI GTAC 4 cut(s) 493, 1444, 1942, 2282
RseI CAYNNNNRTG 2 cut(s) 443, 1990
SacI GAGCTC 2 cut(s) 363, 507
SacII CCGCGG 1 cut(s) 343
SalI GTCGAC 1 cut(s) 296
SapI GCTCTTC 3 cut(s) 91, 1410, 1728
SaqAI TTAA 7 cut(s) 900, 960, 1073, 1086, 1628, 1754, 1923
Sau3AI GATC 9 cut(s) 6, 441, 482, 652, 814, 916, 1090, 1800, 2200
SchI GAGTC 3 cut(s) 242, 317, 520
ScrFI CCNGG 6 cut(s) 81, 118, 234, 256, 380, 1152
SduI GDGCHC 6 cut(s) 27, 262, 363, 387, 507, 1134
SexAI ACCWGGT 2 cut(s) 116, 378
SfaNI GCATC 2 cut(s) 1090, 2480
SfcI CTRYAG 1 cut(s) 1066
SfoI GGCGCC 1 cut(s) 283
Sfr274I CTCGAG 1 cut(s) 1559
Sfr303I CCGCGG 1 cut(s) 343
SgrAI CRCCGGYG 1 cut(s) 398
SgrBI CCGCGG 1 cut(s) 343
SgrDI CGTCGACG 1 cut(s) 296
SinI GGWCC 4 cut(s) 414, 1214, 1704, 1933
SlaI CTCGAG 1 cut(s) 1559
SmiI ATTTAAAT 1 cut(s) 1629
SmiMI CAYNNNNRTG 2 cut(s) 443, 1990
SmlI CTYRAG 3 cut(s) 1409, 1559, 1753
SmoI CTYRAG 3 cut(s) 1409, 1559, 1753
SpeI ACTAGT 2 cut(s) 767, 2381
SseBI AGGCCT 1 cut(s) 2362
SspDI GGCGCC 1 cut(s) 281
SspMI CTAG 9 cut(s) 734, 768, 1005, 1188, 1634, 1971, 2177, 2382, 2448
SstI GAGCTC 2 cut(s) 363, 507
StuI AGGCCT 1 cut(s) 2362
StyD4I CCNGG 6 cut(s) 79, 116, 232, 254, 378, 1150
StyI CCWWGG 3 cut(s) 1467, 1783, 2327
SwaI ATTTAAAT 1 cut(s) 1629
TaaI ACNGT 7 cut(s) 466, 839, 968, 1079, 1370, 1540, 2484
TaiI ACGT 1 cut(s) 2231
TaqI TCGA 6 cut(s) 297, 363, 423, 906, 1560, 1768
TatI WGTACW 2 cut(s) 492, 2281
TauI GCSGC 7 cut(s) 68, 197, 216, 240, 342, 345, 888
TfiI GAWTC 9 cut(s) 520, 559, 869, 1034, 1222, 1473, 1765, 1770, 2160
Tru1I TTAA 7 cut(s) 900, 960, 1073, 1086, 1628, 1754, 1923
Tru9I TTAA 7 cut(s) 900, 960, 1073, 1086, 1628, 1754, 1923
TscAI CASTG 7 cut(s) 469, 673, 824, 1338, 1554, 1795, 1963
TseFI GTSAC 2 cut(s) 979, 2224
TseI GCWGC 6 cut(s) 240, 404, 671, 803, 888, 2248
Tsp45I GTSAC 2 cut(s) 979, 2224
TspDTI ATGAA 5 cut(s) 142, 1185, 1681, 1709, 2397
TspGWI ACGGA 2 cut(s) 449, 1046
TspRI CASTG 7 cut(s) 469, 673, 824, 1338, 1554, 1795, 1963
Van91I CCANNNNNTGG 1 cut(s) 1379
Vha464I CTTAAG 1 cut(s) 1753
VpaK11BI GGWCC 4 cut(s) 414, 1214, 1704, 1933
XagI CCTNNNNNAGG 2 cut(s) 615, 1814
XapI RAATTY 6 cut(s) 11, 852, 1748, 2077, 2135, 2418
XhoI CTCGAG 1 cut(s) 1559
XmiI GTMKAC 1 cut(s) 297
XmnI GAANNNNTTC 2 cut(s) 1769, 2111
XspI CTAG 9 cut(s) 734, 768, 1005, 1188, 1634, 1971, 2177, 2382, 2448
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.