Rw4G010220

Protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000074
Physical Location & Seq
Forward (+)
23470772 .. 23472021
1250 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G010220.1

Sequence Viewer

Length: 1206 bp
ATGGATGAGAGCAGCATGCGATTCAGTGAACCGAATTACCATGGTTGGTCTGTAGATGAGGATGACTTTTCAGATGAGTACGAAGAGTTATTCTCGGATGAGGAAGCTTCGCAGAGTGCAAATATGGATGAGAATCTGGATTGTCTACACTTCAATGGCAAGAAGTATGAAGATCTTAGATCCTCTTATATGATTGGTGTTGAGTTTAGCAGCGTCAAGGCAGTGGACACATTCTATGCTTACTATTCACTTGCCATGGGCTTCAGTTTCCGAAAGGAAAAGTTGTGTCAAAATGCAGCACAAGTGGTGGTGAGAAGACAGTTAGTGTGTTCAAAGGAGGAAATCATTTCATGCGCCAAAAATCTTAGTCCACCTCATGGGACAAAACCGGTCTGCAAGAGGAAGACAGTTAACCAGAAACCAATCGTGGAAGATGCTGATACAAGAAGTATGAAACGTTCTGGGAAGCAGTTTGGTGATGGTGAACATGAAAAAAAAAGGCAGCGCCCTCCACAAAGAAATATTACCAGAGGTAATTGTCAAGCCTGTATCACAACACGCCGATGCAAGGAAAATGGTGTCTTCCGTGTGGTCCAATTCATCACCGAACATAACCACGACCTTGCTACAACAGAGTTTGTTCCCTTCCTCCGATCCCACCGCAAGGTTCGGGACCATGACGTTGCTCAGGTAACAGAACTTAAGAAAGTCTCTGTTGGTACATGCCGGGCTTATGAGTTGTTGGTCCACCAAGCCGGTGGCCATGAATTTGTTGGTTTCCTCATAAAAGATTTGTATAACAAGATGGACTCTGAAAGGAAGGAACTCATGGTTGATGGTGACACCCAGTCTACAATTAGTTTCATGAATTTGAAAGCATATAAAGAGGCGGAGTTTTTCTGTTTGTTCAGTGTTGATGCCGAAGGCCGACTGGGTAATATGTTTTGGAGAGATACGAAGTCTCTAGCAGATTACAATAATTTTGGGGATGTTTTGATTATTGATAGCACCTACAAGACCAACATATACGGCAAACCATTAGCCGTCTTTGTTGGTGCAAATAACCACAGGGCAACAGTACTATTTGCGTGTGCACTGTTGGCTGATGAGAGTGAGGACACCTACAATTGGGTGGTTACGGCCTTTTTGACTTCCATGAGGGGAAAAAACCAATATCAGTCCTCACTGACGGGGACGAGGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

401

Amino Acids

45.89

Weight (kDa)

6.33

Isoelectric Point (pI)

38.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 157 - 209 1.8e-07 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 303 - 383 8e-07 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 331 - 390 1.9e-12 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 377
AccI GTMKAC 2 cut(s) 145, 851
AciI CCGC 2 cut(s) 661, 890
AclI AACGTT 1 cut(s) 457
AclWI GGATC 2 cut(s) 174, 648
AcoI YGGCCR 1 cut(s) 760
AcsI RAATTY 2 cut(s) 767, 868
AcuI CTGAAG 1 cut(s) 247
AfaI GTAC 3 cut(s) 80, 721, 1080
AfiI CCNNNNNNNGG 4 cut(s) 377, 568, 664, 1128
AflII CTTAAG 1 cut(s) 701
AgeI ACCGGT 1 cut(s) 388
AgsI TTSAA 3 cut(s) 154, 333, 874
AhdI GACNNNNNGTC 1 cut(s) 847
AluBI AGCT 1 cut(s) 107
AluI AGCT 1 cut(s) 107
Alw21I GWGCWC 1 cut(s) 1096
Alw26I GTCTC 2 cut(s) 715, 966
Alw44I GTGCAC 1 cut(s) 1092
AlwI GGATC 2 cut(s) 174, 648
AoxI GGCC 3 cut(s) 760, 925, 1140
ApaLI GTGCAC 1 cut(s) 1092
ApeKI GCWGC 4 cut(s) 12, 210, 296, 502
ApoI RAATTY 2 cut(s) 767, 868
AsiGI ACCGGT 1 cut(s) 388
AspLEI GCGC 2 cut(s) 356, 507
AspS9I GGNCC 3 cut(s) 592, 673, 745
AsuC2I CCSGG 1 cut(s) 728
AsuHPI GGTGA 5 cut(s) 322, 488, 494, 595, 851
AvaII GGWCC 3 cut(s) 592, 673, 745
BaeGI GKGCMC 1 cut(s) 1096
BalI TGGCCA 1 cut(s) 762
BbsI GAAGAC 3 cut(s) 322, 410, 574
Bbv12I GWGCWC 1 cut(s) 1096
BbvI GCAGC 4 cut(s) 24, 222, 308, 514
BccI CCATC 3 cut(s) 473, 799, 830
BceAI ACGGC 3 cut(s) 1028, 1045, 1155
BcnI CCSGG 1 cut(s) 728
BcoDI GTCTC 2 cut(s) 715, 966
BfaI CTAG 1 cut(s) 965
BfmI CTRYAG 1 cut(s) 51
BfoI RGCGCY 1 cut(s) 508
BfrI CTTAAG 1 cut(s) 701
BglII AGATCT 1 cut(s) 172
BisI GCNGC 4 cut(s) 13, 211, 297, 503
BlsI GCNGC 4 cut(s) 14, 212, 298, 504
BmcAI AGTACT 1 cut(s) 1080
Bme1390I CCNGG 1 cut(s) 728
Bme18I GGWCC 3 cut(s) 592, 673, 745
BmeRI GACNNNNNGTC 1 cut(s) 847
BmgT120I GGNCC 3 cut(s) 592, 673, 745
BmiI GGNNCC 1 cut(s) 674
BmrFI CCNGG 1 cut(s) 728
BmrI ACTGGG 2 cut(s) 841, 941
BmsI GCATC 3 cut(s) 424, 554, 907
BmuI ACTGGG 2 cut(s) 841, 941
BpiI GAAGAC 3 cut(s) 322, 410, 574
BplI GAGNNNNNCTC 2 cut(s) 77, 109
Bpu10I CCTNAGC 1 cut(s) 687
BpuMI CCSGG 1 cut(s) 728
BsaBI GATNNNNATC 1 cut(s) 132
BsaJI CCNNGG 2 cut(s) 40, 255
BsaWI WCCGGW 1 cut(s) 388
Bsc4I CCNNNNNNNGG 4 cut(s) 377, 568, 664, 1128
Bse118I RCCGGY 2 cut(s) 388, 755
Bse1I ACTGG 2 cut(s) 847, 936
Bse8I GATNNNNATC 1 cut(s) 132
BseDI CCNNGG 2 cut(s) 40, 255
BseGI GGATG 5 cut(s) 10, 67, 103, 133, 994
BseJI GATNNNNATC 1 cut(s) 132
BseLI CCNNNNNNNGG 4 cut(s) 377, 568, 664, 1128
BseMII CTCAG 1 cut(s) 701
BseNI ACTGG 2 cut(s) 847, 936
BseSI GKGCMC 1 cut(s) 1096
BseXI GCAGC 4 cut(s) 24, 222, 308, 514
BshFI GGCC 3 cut(s) 762, 927, 1142
BshTI ACCGGT 1 cut(s) 388
BsiHKAI GWGCWC 1 cut(s) 1096
BsiSI CCGG 3 cut(s) 389, 727, 756
BslFI GGGAC 2 cut(s) 394, 686
BslI CCNNNNNNNGG 4 cut(s) 377, 568, 664, 1128
BsmAI GTCTC 2 cut(s) 715, 966
BsmFI GGGAC 2 cut(s) 394, 686
BsnI GGCC 3 cut(s) 762, 927, 1142
Bsp1286I GDGCHC 1 cut(s) 1096
Bsp143I GATC 3 cut(s) 172, 179, 653
Bsp19I CCATGG 2 cut(s) 40, 255
BspACI CCGC 2 cut(s) 661, 890
BspANI GGCC 3 cut(s) 762, 927, 1142
BspCNI CTCAG 1 cut(s) 700
BspHI TCATGA 1 cut(s) 864
BspLI GGNNCC 1 cut(s) 674
BspPI GGATC 2 cut(s) 174, 648
BspTI CTTAAG 1 cut(s) 701
BsrFI RCCGGY 2 cut(s) 388, 755
BsrI ACTGG 2 cut(s) 847, 936
BssAI RCCGGY 2 cut(s) 388, 755
BssECI CCNNGG 2 cut(s) 40, 255
BssMI GATC 3 cut(s) 172, 179, 653
BssT1I CCWWGG 2 cut(s) 40, 255
Bst4CI ACNGT 4 cut(s) 321, 409, 1078, 1098
Bst6I CTCTTC 1 cut(s) 78
BstAFI CTTAAG 1 cut(s) 701
BstC8I GCNNGC 1 cut(s) 17
BstDEI CTNAG 3 cut(s) 176, 365, 687
BstDSI CCRYGG 2 cut(s) 40, 255
BstF5I GGATG 5 cut(s) 10, 67, 103, 133, 994
BstH2I RGCGCY 1 cut(s) 508
BstHHI GCGC 2 cut(s) 356, 507
BstKTI GATC 3 cut(s) 175, 182, 656
BstMAI GTCTC 2 cut(s) 715, 966
BstMBI GATC 3 cut(s) 172, 179, 653
BstMWI GCNNNNNNNGC 1 cut(s) 1100
BstNSI RCATGY 2 cut(s) 19, 726
BstSCI CCNGG 1 cut(s) 726
BstSFI CTRYAG 1 cut(s) 51
BstSLI GKGCMC 1 cut(s) 1096
BstV1I GCAGC 4 cut(s) 24, 222, 308, 514
BstV2I GAAGAC 3 cut(s) 322, 410, 574
BstX2I RGATCY 2 cut(s) 172, 179
BstXI CCANNNNNNTGG 1 cut(s) 758
BstYI RGATCY 2 cut(s) 172, 179
BsuRI GGCC 3 cut(s) 762, 927, 1142
BtgI CCRYGG 2 cut(s) 40, 255
BtsCI GGATG 5 cut(s) 10, 67, 103, 133, 994
BtsI GCAGTG 1 cut(s) 228
BtsIMutI CAGTG 5 cut(s) 31, 228, 916, 1094, 1184
Cac8I GCNNGC 1 cut(s) 17
CciI TCATGA 1 cut(s) 864
CfoI GCGC 2 cut(s) 356, 507
Cfr10I RCCGGY 2 cut(s) 388, 755
Cfr13I GGNCC 3 cut(s) 592, 673, 745
CseI GACGC 1 cut(s) 202
Csp6I GTAC 3 cut(s) 79, 720, 1079
CspAI ACCGGT 1 cut(s) 388
CviQI GTAC 3 cut(s) 79, 720, 1079
DdeI CTNAG 3 cut(s) 176, 365, 687
DpnI GATC 3 cut(s) 174, 181, 655
DpnII GATC 3 cut(s) 172, 179, 653
DriI GACNNNNNGTC 1 cut(s) 847
EaeI YGGCCR 1 cut(s) 760
Eam1104I CTCTTC 1 cut(s) 78
Eam1105I GACNNNNNGTC 1 cut(s) 847
EarI CTCTTC 1 cut(s) 78
EciI GGCGGA 1 cut(s) 905
Eco130I CCWWGG 2 cut(s) 40, 255
Eco47I GGWCC 3 cut(s) 592, 673, 745
Eco57I CTGAAG 1 cut(s) 247
EcoT14I CCWWGG 2 cut(s) 40, 255
ErhI CCWWGG 2 cut(s) 40, 255
FaqI GGGAC 2 cut(s) 394, 686
FblI GTMKAC 2 cut(s) 145, 851
Fnu4HI GCNGC 4 cut(s) 13, 211, 297, 503
FokI GGATG 5 cut(s) 17, 74, 110, 140, 1001
Fsp4HI GCNGC 4 cut(s) 13, 211, 297, 503
FspBI CTAG 1 cut(s) 965
GlaI GCGC 2 cut(s) 355, 506
GluI GCNGC 4 cut(s) 13, 211, 297, 503
HaeII RGCGCY 1 cut(s) 508
HaeIII GGCC 3 cut(s) 762, 927, 1142
HapII CCGG 3 cut(s) 389, 727, 756
HgaI GACGC 1 cut(s) 202
HhaI GCGC 2 cut(s) 356, 507
Hin6I GCGC 2 cut(s) 354, 505
HinP1I GCGC 2 cut(s) 354, 505
HincII GTYRAC 1 cut(s) 412
HindII GTYRAC 1 cut(s) 412
HindIII AAGCTT 1 cut(s) 105
HinfI GANTC 3 cut(s) 21, 133, 809
HpaI GTTAAC 1 cut(s) 412
HpaII CCGG 3 cut(s) 389, 727, 756
HphI GGTGA 5 cut(s) 322, 488, 494, 595, 851
Hpy166II GTNNAC 9 cut(s) 29, 146, 226, 371, 412, 485, 748, 852, 1094
Hpy188I TCNGA 5 cut(s) 73, 97, 272, 653, 814
Hpy188III TCNNGA 3 cut(s) 137, 671, 865
Hpy8I GTNNAC 9 cut(s) 29, 146, 226, 371, 412, 485, 748, 852, 1094
HpyAV CCTTC 3 cut(s) 655, 814, 917
HpyCH4III ACNGT 4 cut(s) 321, 409, 1078, 1098
HpyCH4IV ACGT 2 cut(s) 457, 681
HpyCH4V TGCA 6 cut(s) 119, 296, 396, 567, 1058, 1094
HpyF10VI GCNNNNNNNGC 1 cut(s) 1100
HpyF3I CTNAG 3 cut(s) 176, 365, 687
HpySE526I ACGT 2 cut(s) 457, 681
HspAI GCGC 2 cut(s) 354, 505
KspAI GTTAAC 1 cut(s) 412
Kzo9I GATC 3 cut(s) 172, 179, 653
Lsp1109I GCAGC 4 cut(s) 24, 222, 308, 514
LweI GCATC 3 cut(s) 424, 554, 907
MaeI CTAG 1 cut(s) 965
MaeII ACGT 2 cut(s) 457, 681
MaeIII GTNAC 3 cut(s) 691, 839, 1135
MalI GATC 3 cut(s) 174, 181, 655
MboI GATC 3 cut(s) 172, 179, 653
MboII GAAGA 6 cut(s) 95, 182, 327, 415, 443, 574
MfeI CAATTG 1 cut(s) 1126
MflI RGATCY 2 cut(s) 172, 179
MhlI GDGCHC 1 cut(s) 1096
MlsI TGGCCA 1 cut(s) 762
MluCI AATT 8 cut(s) 34, 535, 596, 767, 855, 868, 979, 1126
MluNI TGGCCA 1 cut(s) 762
MlyI GAGTC 1 cut(s) 803
Mox20I TGGCCA 1 cut(s) 762
MscI TGGCCA 1 cut(s) 762
MseI TTAA 2 cut(s) 411, 702
MslI CAYNNNNRTG 2 cut(s) 153, 562
Msp20I TGGCCA 1 cut(s) 762
MspCI CTTAAG 1 cut(s) 701
MspI CCGG 3 cut(s) 389, 727, 756
MspR9I CCNGG 1 cut(s) 728
MunI CAATTG 1 cut(s) 1126
MwoI GCNNNNNNNGC 1 cut(s) 1100
NciI CCSGG 1 cut(s) 728
NcoI CCATGG 2 cut(s) 40, 255
NdeII GATC 3 cut(s) 172, 179, 653
NlaIV GGNNCC 1 cut(s) 674
NmuCI GTSAC 1 cut(s) 839
NspI RCATGY 2 cut(s) 19, 726
PaeI GCATGC 1 cut(s) 19
PagI TCATGA 1 cut(s) 864
PfeI GAWTC 2 cut(s) 21, 133
PflMI CCANNNNNTGG 1 cut(s) 377
PinAI ACCGGT 1 cut(s) 388
PkrI GCNGC 4 cut(s) 14, 212, 298, 504
PleI GAGTC 1 cut(s) 803
PpsI GAGTC 1 cut(s) 803
Psp1406I AACGTT 1 cut(s) 457
PspN4I GGNNCC 1 cut(s) 674
PspPI GGNCC 3 cut(s) 592, 673, 745
PsrI GAACNNNNNNTAC 2 cut(s) 442, 474
PsuI RGATCY 2 cut(s) 172, 179
RsaI GTAC 3 cut(s) 80, 721, 1080
RsaNI GTAC 3 cut(s) 79, 720, 1079
RseI CAYNNNNRTG 2 cut(s) 153, 562
SaqAI TTAA 2 cut(s) 411, 702
SatI GCNGC 4 cut(s) 13, 211, 297, 503
Sau3AI GATC 3 cut(s) 172, 179, 653
Sau96I GGNCC 3 cut(s) 592, 673, 745
ScaI AGTACT 1 cut(s) 1080
SchI GAGTC 1 cut(s) 803
ScrFI CCNGG 1 cut(s) 728
SduI GDGCHC 1 cut(s) 1096
SfaNI GCATC 3 cut(s) 424, 554, 907
SfcI CTRYAG 1 cut(s) 51
SinI GGWCC 3 cut(s) 592, 673, 745
SmiMI CAYNNNNRTG 2 cut(s) 153, 562
SmlI CTYRAG 1 cut(s) 701
SmoI CTYRAG 1 cut(s) 701
SphI GCATGC 1 cut(s) 19
Sse9I AATT 8 cut(s) 34, 535, 596, 767, 855, 868, 979, 1126
SsiI CCGC 2 cut(s) 661, 890
SspI AATATT 1 cut(s) 523
SspMI CTAG 1 cut(s) 965
StyD4I CCNGG 1 cut(s) 726
StyI CCWWGG 2 cut(s) 40, 255
TaaI ACNGT 4 cut(s) 321, 409, 1078, 1098
TaiI ACGT 2 cut(s) 460, 684
TasI AATT 8 cut(s) 34, 535, 596, 767, 855, 868, 979, 1126
TatI WGTACW 1 cut(s) 1078
TfiI GAWTC 2 cut(s) 21, 133
Tru1I TTAA 2 cut(s) 411, 702
Tru9I TTAA 2 cut(s) 411, 702
TscAI CASTG 5 cut(s) 31, 228, 916, 1101, 1191
TseFI GTSAC 1 cut(s) 839
TseI GCWGC 4 cut(s) 12, 210, 296, 502
Tsp45I GTSAC 1 cut(s) 839
TspDTI ATGAA 8 cut(s) 183, 339, 467, 504, 589, 780, 853, 881
TspGWI ACGGA 1 cut(s) 575
TspRI CASTG 5 cut(s) 31, 228, 916, 1101, 1191
Van91I CCANNNNNTGG 1 cut(s) 377
Vha464I CTTAAG 1 cut(s) 701
VneI GTGCAC 1 cut(s) 1092
VpaK11BI GGWCC 3 cut(s) 592, 673, 745
XapI RAATTY 2 cut(s) 767, 868
XceI RCATGY 2 cut(s) 19, 726
XcmI CCANNNNNNNNNTGG 2 cut(s) 755, 770
XmiI GTMKAC 2 cut(s) 145, 851
XspI CTAG 1 cut(s) 965
ZrmI AGTACT 1 cut(s) 1080
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.