Rh3BG348800

Protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0000074
Physical Location & Seq
Reverse (-)
38535514 .. 38537967
2454 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG348800.1

Sequence Viewer

Length: 1407 bp
ATGGATGAGAGCGGCATGCGATTCAGTGAACCGAATTACCATCGTTGGTCTGTAGATGAGGATGACTTTTCAGATGAGTACGAAGAGTTATTCTCGGATGAGGAAGCTTCGCAGAGTGCAAATATGGATGAGAATCTGGATTGTCTACACTTCAATGGCAAGAAGTATGAAGATCTCCAATCCTCTGATATGATTGGTGTTGAGTTTAGCAGCGTCAAGGCAGTGGACACATTCTATGCTTACTATTCACTTGCCATGGGCTTCAATTTCCGAAAGGAAAAGTTGTGTCGAAATGCAGCACAAGTGGTGGTGAGAAGACAGTTAGTGTGTTCAAAGGAGGGTGAGAGAAAAAAAAGGGGCAAGCCTGATCCTAGTTTAGCATCAGAAATCATTTCAAGCGCCCAAAATCTTAGTCCACCTCATGGGACAAAACCGGTCTGCAAGAGGAAGACAGTTAACCAGAAACCAATCGTGGAAGATGCTGATACAAGAAGTATGAAACGTTCTGGGAAGCAGTTTGGTGTTGGTGAACATGAAAAAAAAAGGCAGCGCCCTCCACAAAGAAATATTACCAGAGGTAATTGTCAAGCCGATATCACAGCACGCCGATGCAAGGAAAGTGGTGTCTTCCGTGTGGTCCAATTCATCACCGAACATAACCACGACCTTGCTACAACAGAGTTTGTTCCCTTCCTCCGATCCCACCGCAAGGTTCGGGACCATGACGTTGCTCAGTCAAAGTTTCTCGTTGCTGACCGTGTTCGTTATGAGAATCAAGGATCAACACTTCATCTTGTAACCCAATATGGTAAACCTGAAAGGACATGGCATGTGACACATTATCAAGGTAAGCCCGACCTTTCTTTCGTATGCTCATGTCACCTCTTTGAGTCGGATGGTATTCCTTGCTGCCACATCTTCACAGTCATGAAGACAATGAATATGACTACCCTTCCAGAATCTTTGGTTAATCAGAGGTGGAAAAAACAGGCTTGTACCAAAAATACCAGTACCCTCAGTAGTGGAATAATGCCCGCCAAGGATTTGCAGCTTGCCCGTTATGGGCAAATGATGGGTGATTGTGCTCAAATCTGTCATTCAGCTTCATTCTCAGATGAGGCATATGAAGAAATCACTAACTGTCTTAGTCGACTAATGGTTAGGTCCAAAACATTCAAGAGATGCAAAGATAGTCAGCCACCAGAAACTGTTGATGGTCTACACCCTAATGTGATTAGGGATCCGAACGTGTGCAAAACTAAGGGCACACATTCCAGGCATTCTACCAGTGTTGAGGTTGAGAGGGATCAGCCAGGAGGGAGGGGTTGTGGATTTTGCAGCCGACCAGGTCATAATGTTCCCACCTGTGCACTGCTAGCTGCACAAAATGGGGGGGGAAAAGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

468

Amino Acids

52.88

Weight (kDa)

8.6

Isoelectric Point (pI)

48.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 77 - 121 2.9e-06 FAR1 DNA-binding domain
FAR1 PF03101 171 - 224 6.9e-08 FAR1 DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 422
AccBSI CCGCTC 1 cut(s) 12
AccI GTMKAC 3 cut(s) 145, 1150, 1219
AciI CCGC 3 cut(s) 12, 706, 1035
AclI AACGTT 1 cut(s) 502
AclWI GGATC 6 cut(s) 362, 693, 787, 1235, 1248, 1314
AfaI GTAC 3 cut(s) 80, 997, 1012
AfiI CCNNNNNNNGG 4 cut(s) 422, 613, 709, 1062
AflIII ACRYGT 1 cut(s) 1248
AgeI ACCGGT 1 cut(s) 433
AgsI TTSAA 5 cut(s) 154, 265, 333, 396, 1177
AjnI CCWGG 3 cut(s) 1274, 1312, 1345
AluBI AGCT 4 cut(s) 107, 1051, 1103, 1379
AluI AGCT 4 cut(s) 107, 1051, 1103, 1379
Alw21I GWGCWC 2 cut(s) 1087, 1372
Alw44I GTGCAC 1 cut(s) 1368
AlwI GGATC 6 cut(s) 362, 693, 787, 1235, 1248, 1314
AlwNI CAGNNNCTG 1 cut(s) 1208
ApaLI GTGCAC 1 cut(s) 1368
ApeKI GCWGC 7 cut(s) 210, 296, 547, 909, 1048, 1338, 1379
ArsI GACNNNNNNTTYG 4 cut(s) 397, 429, 848, 880
AsiGI ACCGGT 1 cut(s) 433
AspLEI GCGC 2 cut(s) 401, 552
AspS9I GGNCC 3 cut(s) 637, 718, 1164
AsuHPI GGTGA 6 cut(s) 322, 353, 539, 640, 872, 1088
AsuNHI GCTAGC 1 cut(s) 1375
AvaII GGWCC 3 cut(s) 637, 718, 1164
BaeGI GKGCMC 2 cut(s) 1268, 1372
BamHI GGATCC 1 cut(s) 1240
BbsI GAAGAC 4 cut(s) 322, 455, 619, 938
Bbv12I GWGCWC 2 cut(s) 1087, 1372
BbvI GCAGC 7 cut(s) 222, 308, 559, 896, 1060, 1350, 1366
BccI CCATC 4 cut(s) 48, 890, 1066, 1208
BciT130I CCWGG 3 cut(s) 1276, 1314, 1347
BfaI CTAG 2 cut(s) 372, 1376
BfmI CTRYAG 1 cut(s) 51
BfoI RGCGCY 2 cut(s) 402, 553
BglII AGATCT 1 cut(s) 172
BisI GCNGC 8 cut(s) 13, 211, 297, 548, 910, 1049, 1339, 1380
BlsI GCNGC 8 cut(s) 14, 212, 298, 549, 911, 1050, 1340, 1381
Bme1390I CCNGG 3 cut(s) 1276, 1314, 1347
Bme18I GGWCC 3 cut(s) 637, 718, 1164
BmgT120I GGNCC 3 cut(s) 637, 718, 1164
BmiI GGNNCC 2 cut(s) 719, 1242
BmrFI CCNGG 3 cut(s) 1276, 1314, 1347
BmsI GCATC 4 cut(s) 389, 469, 599, 1172
BmtI GCTAGC 1 cut(s) 1379
BpiI GAAGAC 4 cut(s) 322, 455, 619, 938
BplI GAGNNNNNCTC 2 cut(s) 77, 109
BsaBI GATNNNNATC 1 cut(s) 132
BsaJI CCNNGG 2 cut(s) 255, 1038
BsaWI WCCGGW 1 cut(s) 433
BsaXI ACNNNNNCTCC 2 cut(s) 1312, 1342
Bsc4I CCNNNNNNNGG 4 cut(s) 422, 613, 709, 1062
Bse118I RCCGGY 1 cut(s) 433
Bse1I ACTGG 2 cut(s) 1008, 1287
Bse8I GATNNNNATC 1 cut(s) 132
BseBI CCWGG 3 cut(s) 1276, 1314, 1347
BseDI CCNNGG 2 cut(s) 255, 1038
BseGI GGATG 5 cut(s) 10, 67, 103, 133, 901
BseJI GATNNNNATC 1 cut(s) 132
BseLI CCNNNNNNNGG 4 cut(s) 422, 613, 709, 1062
BseMII CTCAG 3 cut(s) 746, 1030, 1125
BseNI ACTGG 2 cut(s) 1008, 1287
BseSI GKGCMC 2 cut(s) 1268, 1372
BseXI GCAGC 7 cut(s) 222, 308, 559, 896, 1060, 1350, 1366
BsgI GTGCAG 1 cut(s) 1365
BshTI ACCGGT 1 cut(s) 433
BsiHKAI GWGCWC 2 cut(s) 1087, 1372
BsiSI CCGG 1 cut(s) 434
BslFI GGGAC 2 cut(s) 439, 731
BslI CCNNNNNNNGG 4 cut(s) 422, 613, 709, 1062
BsmFI GGGAC 2 cut(s) 439, 731
BsmI GAATGC 1 cut(s) 1279
Bsp1286I GDGCHC 3 cut(s) 1087, 1268, 1372
Bsp143I GATC 6 cut(s) 172, 367, 698, 779, 1240, 1306
Bsp19I CCATGG 1 cut(s) 255
BspACI CCGC 3 cut(s) 12, 706, 1035
BspCNI CTCAG 3 cut(s) 745, 1029, 1124
BspHI TCATGA 1 cut(s) 927
BspLI GGNNCC 2 cut(s) 719, 1242
BspOI GCTAGC 1 cut(s) 1379
BspPI GGATC 6 cut(s) 362, 693, 787, 1235, 1248, 1314
BsrBI CCGCTC 1 cut(s) 12
BsrFI RCCGGY 1 cut(s) 433
BsrI ACTGG 2 cut(s) 1008, 1287
BssAI RCCGGY 1 cut(s) 433
BssECI CCNNGG 2 cut(s) 255, 1038
BssMI GATC 6 cut(s) 172, 367, 698, 779, 1240, 1306
BssT1I CCWWGG 2 cut(s) 255, 1038
Bst2UI CCWGG 3 cut(s) 1276, 1314, 1347
Bst4CI ACNGT 6 cut(s) 321, 454, 758, 925, 1142, 1210
Bst6I CTCTTC 1 cut(s) 78
BstC8I GCNNGC 6 cut(s) 17, 362, 604, 1035, 1053, 1377
BstDEI CTNAG 6 cut(s) 410, 732, 1016, 1111, 1145, 1260
BstDSI CCRYGG 1 cut(s) 255
BstF5I GGATG 5 cut(s) 10, 67, 103, 133, 901
BstH2I RGCGCY 2 cut(s) 402, 553
BstHHI GCGC 2 cut(s) 401, 552
BstKTI GATC 6 cut(s) 175, 370, 701, 782, 1243, 1309
BstMBI GATC 6 cut(s) 172, 367, 698, 779, 1240, 1306
BstMWI GCNNNNNNNGC 1 cut(s) 1376
BstNI CCWGG 3 cut(s) 1276, 1314, 1347
BstNSI RCATGY 2 cut(s) 19, 833
BstSCI CCNGG 3 cut(s) 1274, 1312, 1345
BstSFI CTRYAG 1 cut(s) 51
BstSLI GKGCMC 2 cut(s) 1268, 1372
BstV1I GCAGC 7 cut(s) 222, 308, 559, 896, 1060, 1350, 1366
BstV2I GAAGAC 4 cut(s) 322, 455, 619, 938
BstX2I RGATCY 2 cut(s) 172, 1240
BstYI RGATCY 2 cut(s) 172, 1240
BtgI CCRYGG 1 cut(s) 255
BtsCI GGATG 5 cut(s) 10, 67, 103, 133, 901
BtsI GCAGTG 2 cut(s) 228, 1370
BtsIMutI CAGTG 4 cut(s) 31, 228, 1294, 1370
Cac8I GCNNGC 6 cut(s) 17, 362, 604, 1035, 1053, 1377
CaiI CAGNNNCTG 1 cut(s) 1208
CciI TCATGA 1 cut(s) 927
CfoI GCGC 2 cut(s) 401, 552
Cfr10I RCCGGY 1 cut(s) 433
Cfr13I GGNCC 3 cut(s) 637, 718, 1164
CseI GACGC 1 cut(s) 202
CsiI ACCWGGT 1 cut(s) 1345
Csp6I GTAC 3 cut(s) 79, 996, 1011
CspAI ACCGGT 1 cut(s) 433
CspCI CAANNNNNGTGG 2 cut(s) 601, 636
CviAII CATG 9 cut(s) 16, 256, 422, 533, 722, 825, 830, 876, 928
CviQI GTAC 3 cut(s) 79, 996, 1011
DdeI CTNAG 6 cut(s) 410, 732, 1016, 1111, 1145, 1260
DpnI GATC 6 cut(s) 174, 369, 700, 781, 1242, 1308
DpnII GATC 6 cut(s) 172, 367, 698, 779, 1240, 1306
Eam1104I CTCTTC 1 cut(s) 78
EarI CTCTTC 1 cut(s) 78
Eco130I CCWWGG 2 cut(s) 255, 1038
Eco32I GATATC 1 cut(s) 595
Eco47I GGWCC 3 cut(s) 637, 718, 1164
EcoRII CCWGG 3 cut(s) 1274, 1312, 1345
EcoRV GATATC 1 cut(s) 595
EcoT14I CCWWGG 2 cut(s) 255, 1038
ErhI CCWWGG 2 cut(s) 255, 1038
FaeI CATG 9 cut(s) 19, 259, 425, 536, 725, 828, 833, 879, 931
FaqI GGGAC 2 cut(s) 439, 731
FatI CATG 9 cut(s) 15, 255, 421, 532, 721, 824, 829, 875, 927
FauI CCCGC 1 cut(s) 1042
FauNDI CATATG 1 cut(s) 1123
FblI GTMKAC 3 cut(s) 145, 1150, 1219
Fnu4HI GCNGC 8 cut(s) 13, 211, 297, 548, 910, 1049, 1339, 1380
FokI GGATG 5 cut(s) 17, 74, 110, 140, 908
Fsp4HI GCNGC 8 cut(s) 13, 211, 297, 548, 910, 1049, 1339, 1380
FspBI CTAG 2 cut(s) 372, 1376
GlaI GCGC 2 cut(s) 400, 551
GluI GCNGC 8 cut(s) 13, 211, 297, 548, 910, 1049, 1339, 1380
HaeII RGCGCY 2 cut(s) 402, 553
HapII CCGG 1 cut(s) 434
HgaI GACGC 1 cut(s) 202
HhaI GCGC 2 cut(s) 401, 552
Hin1II CATG 9 cut(s) 19, 259, 425, 536, 725, 828, 833, 879, 931
Hin6I GCGC 2 cut(s) 399, 550
HinP1I GCGC 2 cut(s) 399, 550
HincII GTYRAC 2 cut(s) 457, 1151
HindII GTYRAC 2 cut(s) 457, 1151
HindIII AAGCTT 1 cut(s) 105
HinfI GANTC 5 cut(s) 21, 133, 772, 890, 959
HpaI GTTAAC 1 cut(s) 457
HpaII CCGG 1 cut(s) 434
HphI GGTGA 6 cut(s) 322, 353, 539, 640, 872, 1088
Hpy188III TCNNGA 5 cut(s) 137, 716, 928, 956, 1177
HpyAV CCTTC 2 cut(s) 700, 962
HpyCH4III ACNGT 6 cut(s) 321, 454, 758, 925, 1142, 1210
HpyCH4IV ACGT 3 cut(s) 502, 726, 1248
HpyF10VI GCNNNNNNNGC 1 cut(s) 1376
HpyF3I CTNAG 6 cut(s) 410, 732, 1016, 1111, 1145, 1260
HpySE526I ACGT 3 cut(s) 502, 726, 1248
Hsp92II CATG 9 cut(s) 19, 259, 425, 536, 725, 828, 833, 879, 931
HspAI GCGC 2 cut(s) 399, 550
KspAI GTTAAC 1 cut(s) 457
Kzo9I GATC 6 cut(s) 172, 367, 698, 779, 1240, 1306
Lsp1109I GCAGC 7 cut(s) 222, 308, 559, 896, 1060, 1350, 1366
LweI GCATC 4 cut(s) 389, 469, 599, 1172
MabI ACCWGGT 1 cut(s) 1345
MaeI CTAG 2 cut(s) 372, 1376
MaeII ACGT 3 cut(s) 502, 726, 1248
MaeIII GTNAC 3 cut(s) 796, 832, 878
MalI GATC 6 cut(s) 174, 369, 700, 781, 1242, 1308
MbiI CCGCTC 1 cut(s) 12
MboI GATC 6 cut(s) 172, 367, 698, 779, 1240, 1306
MboII GAAGA 9 cut(s) 95, 182, 327, 460, 488, 619, 910, 943, 1139
MflI RGATCY 2 cut(s) 172, 1240
MhlI GDGCHC 3 cut(s) 1087, 1268, 1372
MluCI AATT 4 cut(s) 34, 265, 580, 641
MlyI GAGTC 1 cut(s) 899
MmeI TCCRAC 1 cut(s) 873
MseI TTAA 2 cut(s) 456, 969
MslI CAYNNNNRTG 4 cut(s) 153, 607, 926, 1227
MspI CCGG 1 cut(s) 434
MspR9I CCNGG 3 cut(s) 1276, 1314, 1347
Mva1269I GAATGC 1 cut(s) 1279
MvaI CCWGG 3 cut(s) 1276, 1314, 1347
MwoI GCNNNNNNNGC 1 cut(s) 1376
NcoI CCATGG 1 cut(s) 255
NdeI CATATG 1 cut(s) 1123
NdeII GATC 6 cut(s) 172, 367, 698, 779, 1240, 1306
NheI GCTAGC 1 cut(s) 1375
NlaIII CATG 9 cut(s) 19, 259, 425, 536, 725, 828, 833, 879, 931
NlaIV GGNNCC 2 cut(s) 719, 1242
NmuCI GTSAC 2 cut(s) 832, 878
NspI RCATGY 2 cut(s) 19, 833
PaeI GCATGC 1 cut(s) 19
PagI TCATGA 1 cut(s) 927
PctI GAATGC 1 cut(s) 1279
PfeI GAWTC 4 cut(s) 21, 133, 772, 959
PflFI GACNNNGTC 1 cut(s) 1347
PflMI CCANNNNNTGG 1 cut(s) 422
PinAI ACCGGT 1 cut(s) 433
PkrI GCNGC 8 cut(s) 14, 212, 298, 549, 911, 1050, 1340, 1381
PleI GAGTC 1 cut(s) 898
PpsI GAGTC 1 cut(s) 898
Psp1406I AACGTT 1 cut(s) 502
Psp6I CCWGG 3 cut(s) 1274, 1312, 1345
PspGI CCWGG 3 cut(s) 1274, 1312, 1345
PspN4I GGNNCC 2 cut(s) 719, 1242
PspPI GGNCC 3 cut(s) 637, 718, 1164
PsrI GAACNNNNNNTAC 2 cut(s) 487, 519
PstNI CAGNNNCTG 1 cut(s) 1208
PsuI RGATCY 2 cut(s) 172, 1240
PsyI GACNNNGTC 1 cut(s) 1347
RsaI GTAC 3 cut(s) 80, 997, 1012
RsaNI GTAC 3 cut(s) 79, 996, 1011
RseI CAYNNNNRTG 4 cut(s) 153, 607, 926, 1227
SalI GTCGAC 1 cut(s) 1149
SaqAI TTAA 2 cut(s) 456, 969
SatI GCNGC 8 cut(s) 13, 211, 297, 548, 910, 1049, 1339, 1380
Sau3AI GATC 6 cut(s) 172, 367, 698, 779, 1240, 1306
Sau96I GGNCC 3 cut(s) 637, 718, 1164
SchI GAGTC 1 cut(s) 899
ScrFI CCNGG 3 cut(s) 1276, 1314, 1347
SduI GDGCHC 3 cut(s) 1087, 1268, 1372
SexAI ACCWGGT 1 cut(s) 1345
SfaNI GCATC 4 cut(s) 389, 469, 599, 1172
SfcI CTRYAG 1 cut(s) 51
SinI GGWCC 3 cut(s) 637, 718, 1164
SmiMI CAYNNNNRTG 4 cut(s) 153, 607, 926, 1227
SphI GCATGC 1 cut(s) 19
Sse9I AATT 4 cut(s) 34, 265, 580, 641
SsiI CCGC 3 cut(s) 12, 706, 1035
SspI AATATT 1 cut(s) 568
SspMI CTAG 2 cut(s) 372, 1376
StyD4I CCNGG 3 cut(s) 1274, 1312, 1345
StyI CCWWGG 2 cut(s) 255, 1038
TaaI ACNGT 6 cut(s) 321, 454, 758, 925, 1142, 1210
TaiI ACGT 3 cut(s) 505, 729, 1251
TaqI TCGA 2 cut(s) 289, 1150
TasI AATT 4 cut(s) 34, 265, 580, 641
TauI GCSGC 1 cut(s) 15
TfiI GAWTC 4 cut(s) 21, 133, 772, 959
Tru1I TTAA 2 cut(s) 456, 969
Tru9I TTAA 2 cut(s) 456, 969
TscAI CASTG 4 cut(s) 31, 228, 1294, 1377
TseFI GTSAC 2 cut(s) 832, 878
TseI GCWGC 7 cut(s) 210, 296, 547, 909, 1048, 1338, 1379
Tsp45I GTSAC 2 cut(s) 832, 878
TspDTI ATGAA 9 cut(s) 183, 512, 549, 634, 779, 944, 953, 1095, 1140
TspGWI ACGGA 1 cut(s) 620
TspRI CASTG 4 cut(s) 31, 228, 1294, 1377
Tth111I GACNNNGTC 1 cut(s) 1347
Van91I CCANNNNNTGG 1 cut(s) 422
VneI GTGCAC 1 cut(s) 1368
VpaK11BI GGWCC 3 cut(s) 637, 718, 1164
XceI RCATGY 2 cut(s) 19, 833
XmiI GTMKAC 3 cut(s) 145, 1150, 1219
XspI CTAG 2 cut(s) 372, 1376
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.