RLG00000033917

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000074
Physical Location & Seq
Forward (+)
34129368 .. 34138856
9489 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033917

Sequence Viewer

Length: 2526 bp
ATGTCACAATTAACAGTAGGCAAGGTTTACCGCGAAGATTTCAATTTCCCCAATTTGAAACAAATAGGCCCGGTTTTTACTTCAGCATTCCAGATAAGAGCGTTCAGGGGAAGCTTCCTAGCCAGTTCATTCAGACGACAAGAAGAAGAAGTAGAAGAGAATTCAAGCATCGTTAACAACACCACTGGTTTCAACTCTCAGGGGTGCCTAATATGTTTGACTCTTTCTTTTGGGTGGGCTTGTGCAGCTTATAATCCTTATATCAGGTTTAGTGAGAAAGTGAGGTTTGAGGTGGAGGAGAGTGGTTTGCGATATACTGACCGACAATACTACAAGTCTGGCATGGACCCAAACACTGAAGAAGGATCCAGTACTGACAATTCGGATGAGGAGATTGAATACACAAATTTGATGGAAGAGGCAGAAATGCAAGATTTTGAGTTTAATATCATCGAGGAAGTGGACAAGTTCTACTCTTACTATTCTCTAGCGAAGGGTTTCAGTGTAAGGAAGCAGAAGCTCGACAAGAGCTGTGCAGGACTAGTCATTAGAAGACAAACCCCAAAAGATACTATTAGTCATCCGCAAGGGTCGAAGGGGAAGCAGGACAATTGTCAGCTAAGTTCAATTGGGAATTGTCAACAGAACTCGACAAATATCAGTGGGCAGAACCCTCACAAAAAGCAGTGCACTGAAACCCAACGAGCAACGAGAGTTAATTGTCCAGCAAGTTTTGTTGTTAGGTTCCATGCTTTGGGTAGACCTGAGCATCGTCAGTTTCGGAGATCACACCTAAGGGACCACAACCTTGCTCAGGTTAATGCATCAAGGAAGGTTTTAGTGAGAACATGCCATGCTTACCAGTTCCTGGTACACCAAGCCAGAGGCTATGAGTTTGTTGGATTATACAACAAACCACAGGGTGAAAGGAAAGAAGTACATTTGAAAGACATGGATACACAGAGACACTTTTTCCATTTGATTTTTGCTGGACTTACTATTGAGGAATGGGAAATGGCTTGGCAGTACTTTGTGTCAATGAACCGGCTGGAAAACAATGAATGGGTGACTAGTATGTACAATAAACGTGAAAGGTGGGCGGAGGCCTTTTTTCGAGACCATTTTTTTGGAGGAATCTGCAGCACCCAACGATGTGACAGGATGCATAGAAATTTTGACGAAGGTATTGACCGTTATATGAGGCTGTGCGAGGTCTTGCCACAGATGGAGAAAACAATTGAGCGGATAAGAATCAGGTCCTACAGGATGATTACCAATCACAGAACTATGACCCTGTATTGGGAAGCGGTTCACCGGTTCACCCATGACATCTTTCTCGTAATCAAGGAGCAGATTAATTTTGAGTCCAAGTTTGTTATTGGGCCGAGAAGTGTTCAACCAAAAACTGGAAAGCCTGAGCGGAGGTGGATTGTGTCGTACCAGCCTGATGAATGCAATCCAACATTAGTGTATTCTTGCAAACTGTTTGAGTCTGATGGAATTCCCAGTTGTCACATTTTTGCTGTCATGAAATTTGAGATGCTCACAACATTCCCAGAATCGTTGGTGAATAAAAGGTGGACAAAAGAAGCCACTGTTAAGACAGCAATATTGAGTTCGGGTTTGGTTAGTAACATGTCTGTGCAGATTGCACGGTATGGTGAATTGATGGCACAATGTGCTAAAATCTGCCATGTTGCTTCCTATAGTGAGGAGGGGTACAATGAGATAAGAGAAGCTCTGAGCCAGCTGACCATACGATCCCAAAAGTGCAGCTTTGAGAGTGAGTTTGAAAATGGTGTCGGTAGCCAAAGCCAGCCCATGAATTTGACTCTTCACCTCGAAGAAGCCCGGGCATTTGAGTTTTTTGGCTGGACGCTGAGGACAACTAATCTTTTGATTCCAGTGCATGGCCATGAAATTGTGTACGCTGTCATCCATTTTCCTGTCTGCATTTTCAGGGGACAGGAAATAGTTTGGCCACCTCCACATCATGCCGAAAACAAGCCTGTGTATGGCAGGAGGAGATTGGGAAAAGAATCGTTGGTGAATAAAAGGTGGACAAAAGAAGCCACTGTTAAGACAGCAATATTGAGTTCGGGTTTGGTTAGTAACATGTCTGTGCAGATTGCACGGTATGGTGAATTGATGGCACAATGTGCTAAAATCTGCCATGTTGCTTCCTATAGTGAGGAGGGGTACAATGAGATAAGAGAAGCTCTGAGCCAGCTGACCATACGATCCCAAAAGTGCAGCTTTGAGAGCCCTTTCCCAATGTGTGACCACCTTTGTGTGCATCAGACGCCGAGGACAACTAATCTTTTGATTCCAGTGCATGGCCATGAAATTGTGCGCAGATTTGCGGATGGGGCAATGCCATGTTTTCTTAACAATTTTTTGTGGCTACTCCAAATTCAGGTGTACGCTGTCATCCATTTTCCAGTCTGCATTTTCAGGGGACAGGAAATAGTTTGGCCACCCCTACATCATGCTGAAAACAAGCTTCACTTAAGAACATGGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

842

Amino Acids

97.81

Weight (kDa)

8.42

Isoelectric Point (pI)

50.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 252
Acc16I TGCGCA 1 cut(s) 2354
AccB1I GGYRCC 1 cut(s) 204
AccB7I CCANNNNNTGG 5 cut(s) 754, 868, 1406, 1910, 2336
AccBSI CCGCTC 2 cut(s) 1243, 1420
AccI GTMKAC 1 cut(s) 760
AccII CGCG 1 cut(s) 33
AciI CCGC 7 cut(s) 31, 584, 1100, 1243, 1307, 1420, 2363
AclWI GGATC 4 cut(s) 360, 373, 1755, 2235
AcoI YGGCCR 4 cut(s) 1912, 1979, 2338, 2474
AcsI RAATTY 7 cut(s) 160, 406, 1171, 1500, 1532, 1825, 2412
AcuI CTGAAG 2 cut(s) 66, 378
AcyI GRCGYC 1 cut(s) 2303
AdeI CACNNNGTG 3 cut(s) 923, 1679, 2159
AflII CTTAAG 1 cut(s) 2509
AflIII ACRYGT 2 cut(s) 1635, 2115
AgeI ACCGGT 1 cut(s) 1314
AgsI TTSAA 9 cut(s) 43, 58, 165, 193, 398, 627, 946, 1397, 1793
AhlI ACTAGT 2 cut(s) 541, 1070
AjnI CCWGG 1 cut(s) 867
AleI CACNNNNGTG 1 cut(s) 2289
Alw21I GWGCWC 1 cut(s) 692
Alw26I GTCTC 2 cut(s) 958, 1110
Alw44I GTGCAC 1 cut(s) 688
AlwI GGATC 4 cut(s) 360, 373, 1755, 2235
AlwNI CAGNNNCTG 1 cut(s) 868
Ama87I CYCGRG 1 cut(s) 1851
AoxI GGCC 7 cut(s) 67, 1104, 1382, 1912, 1979, 2338, 2474
ApaLI GTGCAC 1 cut(s) 688
ApeKI GCWGC 4 cut(s) 245, 1140, 1773, 2253
ApoI RAATTY 7 cut(s) 160, 406, 1171, 1500, 1532, 1825, 2412
ArsI GACNNNNNNTTYG 2 cut(s) 1109, 1141
AseI ATTAAT 1 cut(s) 1356
AsiGI ACCGGT 1 cut(s) 1314
Asp700I GAANNNNTTC 2 cut(s) 497, 1308
AspLEI GCGC 1 cut(s) 2355
AspS9I GGNCC 5 cut(s) 68, 346, 799, 1257, 1382
AsuC2I CCSGG 3 cut(s) 71, 1852, 1853
AsuHPI GGTGA 9 cut(s) 935, 1078, 1304, 1312, 1579, 1673, 1829, 2059, 2153
AvaI CYCGRG 1 cut(s) 1851
AvaII GGWCC 3 cut(s) 346, 799, 1257
AxyI CCTNAGG 1 cut(s) 794
BaeGI GKGCMC 1 cut(s) 692
BalI TGGCCA 4 cut(s) 1914, 1981, 2340, 2476
BamHI GGATCC 1 cut(s) 365
BanI GGYRCC 1 cut(s) 204
BanII GRGCYC 1 cut(s) 2267
BbsI GAAGAC 1 cut(s) 559
Bbv12I GWGCWC 1 cut(s) 692
BbvCI CCTCAGC 1 cut(s) 1880
BbvI GCAGC 4 cut(s) 257, 1152, 1785, 2265
BccI CCATC 6 cut(s) 406, 1219, 1490, 1663, 2143, 2360
BciT130I CCWGG 1 cut(s) 869
BciVI GTATCC 1 cut(s) 949
BcnI CCSGG 3 cut(s) 71, 1852, 1853
BcoDI GTCTC 2 cut(s) 958, 1110
BcuI ACTAGT 2 cut(s) 541, 1070
BfaI CTAG 4 cut(s) 119, 488, 542, 1071
BfmI CTRYAG 4 cut(s) 1138, 1261, 1705, 2185
BfrI CTTAAG 1 cut(s) 2509
BfuI GTATCC 1 cut(s) 949
BisI GCNGC 4 cut(s) 246, 1141, 1774, 2254
BlsI GCNGC 4 cut(s) 247, 1142, 1775, 2255
BmcAI AGTACT 2 cut(s) 373, 1028
Bme1390I CCNGG 4 cut(s) 71, 869, 1852, 1853
Bme18I GGWCC 3 cut(s) 346, 799, 1257
BmeT110I CYCGRG 1 cut(s) 1851
BmgT120I GGNCC 5 cut(s) 68, 346, 799, 1257, 1382
BmiI GGNNCC 5 cut(s) 206, 348, 367, 746, 800
BmrFI CCNGG 4 cut(s) 71, 869, 1852, 1853
BmrI ACTGGG 1 cut(s) 1500
BmsI GCATC 6 cut(s) 177, 778, 833, 1152, 1530, 2305
BmuI ACTGGG 1 cut(s) 1500
BoxI GACNNNNGTC 1 cut(s) 612
BpiI GAAGAC 1 cut(s) 559
Bpu10I CCTNAGC 4 cut(s) 765, 813, 1416, 1880
BpuMI CCSGG 3 cut(s) 71, 1852, 1853
BsaBI GATNNNNATC 1 cut(s) 1250
BsaHI GRCGYC 1 cut(s) 2303
BsaI GGTCTC 1 cut(s) 1110
BsaJI CCNNGG 2 cut(s) 1851, 2306
BsaWI WCCGGW 1 cut(s) 1314
Bse118I RCCGGY 2 cut(s) 1044, 1314
Bse1I ACTGG 9 cut(s) 123, 190, 369, 862, 1411, 1506, 1904, 2330, 2441
Bse21I CCTNAGG 1 cut(s) 794
Bse3DI GCAATG 1 cut(s) 2379
Bse8I GATNNNNATC 1 cut(s) 1250
BseBI CCWGG 1 cut(s) 869
BseDI CCNNGG 2 cut(s) 1851, 2306
BseGI GGATG 7 cut(s) 391, 580, 1167, 1272, 1935, 2371, 2430
BseJI GATNNNNATC 1 cut(s) 1250
BseMI GCAATG 1 cut(s) 2379
BseMII CTCAG 7 cut(s) 212, 756, 827, 1407, 1733, 1871, 2213
BseNI ACTGG 9 cut(s) 123, 190, 369, 862, 1411, 1506, 1904, 2330, 2441
BseRI GAGGAG 5 cut(s) 311, 404, 1727, 2038, 2207
BseSI GKGCMC 1 cut(s) 692
BseXI GCAGC 4 cut(s) 257, 1152, 1785, 2265
BsgI GTGCAG 6 cut(s) 264, 555, 1664, 1792, 2144, 2272
Bsh1236I CGCG 1 cut(s) 33
BshFI GGCC 7 cut(s) 69, 1106, 1384, 1914, 1981, 2340, 2476
BshNI GGYRCC 1 cut(s) 204
BshTI ACCGGT 1 cut(s) 1314
BsiHKAI GWGCWC 1 cut(s) 692
BsiHKCI CYCGRG 1 cut(s) 1851
BsiSI CCGG 4 cut(s) 71, 1045, 1315, 1852
BslFI GGGAC 3 cut(s) 812, 1977, 2472
BsmAI GTCTC 2 cut(s) 958, 1110
BsmFI GGGAC 3 cut(s) 812, 1977, 2472
BsmI GAATGC 2 cut(s) 86, 1457
BsnI GGCC 7 cut(s) 69, 1106, 1384, 1914, 1981, 2340, 2476
Bso31I GGTCTC 1 cut(s) 1110
BsoBI CYCGRG 1 cut(s) 1851
Bsp1286I GDGCHC 2 cut(s) 692, 2267
Bsp1407I TGTACA 1 cut(s) 1077
Bsp143I GATC 4 cut(s) 365, 785, 1760, 2240
BspACI CCGC 7 cut(s) 31, 584, 1100, 1243, 1307, 1420, 2363
BspANI GGCC 7 cut(s) 69, 1106, 1384, 1914, 1981, 2340, 2476
BspCNI CTCAG 7 cut(s) 211, 757, 826, 1408, 1734, 1872, 2214
BspFNI CGCG 1 cut(s) 33
BspHI TCATGA 1 cut(s) 1527
BspLI GGNNCC 5 cut(s) 206, 348, 367, 746, 800
BspMAI CTGCAG 1 cut(s) 1142
BspPI GGATC 4 cut(s) 360, 373, 1755, 2235
BspT107I GGYRCC 1 cut(s) 204
BspTI CTTAAG 1 cut(s) 2509
BspTNI GGTCTC 1 cut(s) 1110
BsrBI CCGCTC 2 cut(s) 1243, 1420
BsrDI GCAATG 1 cut(s) 2379
BsrFI RCCGGY 2 cut(s) 1044, 1314
BsrGI TGTACA 1 cut(s) 1077
BsrI ACTGG 9 cut(s) 123, 190, 369, 862, 1411, 1506, 1904, 2330, 2441
BssAI RCCGGY 2 cut(s) 1044, 1314
BssECI CCNNGG 2 cut(s) 1851, 2306
BssMI GATC 4 cut(s) 365, 785, 1760, 2240
BssNI GRCGYC 1 cut(s) 2303
Bst2UI CCWGG 1 cut(s) 869
Bst4CI ACNGT 7 cut(s) 16, 1193, 1485, 1597, 1656, 2077, 2136
Bst6I CTCTTC 3 cut(s) 150, 411, 1839
BstACI GRCGYC 1 cut(s) 2303
BstAFI CTTAAG 1 cut(s) 2509
BstAPI GCANNNNNTGC 2 cut(s) 1679, 2159
BstAUI TGTACA 1 cut(s) 1077
BstC8I GCNNGC 3 cut(s) 1748, 1817, 2228
BstDEI CTNAG 9 cut(s) 198, 620, 765, 794, 813, 1416, 1742, 1880, 2222
BstENI CCTNNNNNAGG 1 cut(s) 812
BstF5I GGATG 7 cut(s) 391, 580, 1167, 1272, 1935, 2371, 2430
BstFNI CGCG 1 cut(s) 33
BstHHI GCGC 1 cut(s) 2355
BstKTI GATC 4 cut(s) 368, 788, 1763, 2243
BstMAI GTCTC 2 cut(s) 958, 1110
BstMBI GATC 4 cut(s) 365, 785, 1760, 2240
BstMWI GCNNNNNNNGC 6 cut(s) 245, 1679, 2159, 2262, 2302, 2369
BstNI CCWGG 1 cut(s) 869
BstNSI RCATGY 3 cut(s) 852, 1639, 2119
BstPAI GACNNNNGTC 1 cut(s) 612
BstSCI CCNGG 4 cut(s) 69, 867, 1850, 1851
BstSFI CTRYAG 4 cut(s) 1138, 1261, 1705, 2185
BstSLI GKGCMC 1 cut(s) 692
BstUI CGCG 1 cut(s) 33
BstV1I GCAGC 4 cut(s) 257, 1152, 1785, 2265
BstV2I GAAGAC 1 cut(s) 559
BstX2I RGATCY 1 cut(s) 365
BstXI CCANNNNNNTGG 1 cut(s) 1127
BstYI RGATCY 1 cut(s) 365
Bsu36I CCTNAGG 1 cut(s) 794
BsuI GTATCC 1 cut(s) 949
BsuRI GGCC 7 cut(s) 69, 1106, 1384, 1914, 1981, 2340, 2476
BtsCI GGATG 7 cut(s) 391, 580, 1167, 1272, 1935, 2371, 2430
BtsI GCAGTG 1 cut(s) 692
Cac8I GCNNGC 3 cut(s) 1748, 1817, 2228
CaiI CAGNNNCTG 1 cut(s) 868
CciI TCATGA 1 cut(s) 1527
CfoI GCGC 1 cut(s) 2355
Cfr10I RCCGGY 2 cut(s) 1044, 1314
Cfr13I GGNCC 5 cut(s) 68, 346, 799, 1257, 1382
Cfr9I CCCGGG 1 cut(s) 1851
CseI GACGC 2 cut(s) 1885, 2311
CspAI ACCGGT 1 cut(s) 1314
DdeI CTNAG 9 cut(s) 198, 620, 765, 794, 813, 1416, 1742, 1880, 2222
DpnI GATC 4 cut(s) 367, 787, 1762, 2242
DpnII GATC 4 cut(s) 365, 785, 1760, 2240
DraIII CACNNNGTG 3 cut(s) 923, 1679, 2159
EaeI YGGCCR 4 cut(s) 1912, 1979, 2338, 2474
Eam1104I CTCTTC 3 cut(s) 150, 411, 1839
EarI CTCTTC 3 cut(s) 150, 411, 1839
EciI GGCGGA 1 cut(s) 1115
Eco147I AGGCCT 1 cut(s) 1106
Eco24I GRGCYC 1 cut(s) 2267
Eco31I GGTCTC 1 cut(s) 1110
Eco47I GGWCC 3 cut(s) 346, 799, 1257
Eco57I CTGAAG 2 cut(s) 66, 378
Eco81I CCTNAGG 1 cut(s) 794
Eco88I CYCGRG 1 cut(s) 1851
EcoNI CCTNNNNNAGG 1 cut(s) 812
EcoO109I RGGNCCY 1 cut(s) 1257
EcoRI GAATTC 2 cut(s) 160, 1500
EcoRII CCWGG 1 cut(s) 867
EcoT22I ATGCAT 2 cut(s) 826, 1167
EcoT38I GRGCYC 1 cut(s) 2267
FalI AAGNNNNNCTT 6 cut(s) 1760, 1792, 2240, 2272, 2492, 2524
FaqI GGGAC 3 cut(s) 812, 1977, 2472
FblI GTMKAC 1 cut(s) 760
Fnu4HI GCNGC 4 cut(s) 246, 1141, 1774, 2254
FokI GGATG 7 cut(s) 398, 567, 1174, 1279, 1922, 2378, 2417
FriOI GRGCYC 1 cut(s) 2267
Fsp4HI GCNGC 4 cut(s) 246, 1141, 1774, 2254
FspBI CTAG 4 cut(s) 119, 488, 542, 1071
FspI TGCGCA 1 cut(s) 2354
GlaI GCGC 1 cut(s) 2354
GluI GCNGC 4 cut(s) 246, 1141, 1774, 2254
HaeIII GGCC 7 cut(s) 69, 1106, 1384, 1914, 1981, 2340, 2476
HapII CCGG 4 cut(s) 71, 1045, 1315, 1852
HgaI GACGC 2 cut(s) 1885, 2311
HhaI GCGC 1 cut(s) 2355
Hin1I GRCGYC 1 cut(s) 2303
Hin6I GCGC 1 cut(s) 2353
HinP1I GCGC 1 cut(s) 2353
HincII GTYRAC 2 cut(s) 175, 641
HindII GTYRAC 2 cut(s) 175, 641
HindIII AAGCTT 2 cut(s) 112, 2501
HpaI GTTAAC 1 cut(s) 175
HpaII CCGG 4 cut(s) 71, 1045, 1315, 1852
HphI GGTGA 9 cut(s) 935, 1078, 1304, 1312, 1579, 1673, 1829, 2059, 2153
Hpy188I TCNGA 7 cut(s) 134, 385, 783, 1495, 1743, 2223, 2301
Hpy188III TCNNGA 3 cut(s) 91, 1115, 1528
HpyAV CCTTC 5 cut(s) 356, 487, 589, 826, 1175
HpyCH4III ACNGT 7 cut(s) 16, 1193, 1485, 1597, 1656, 2077, 2136
HpyCH4IV ACGT 1 cut(s) 1087
HpyF10VI GCNNNNNNNGC 6 cut(s) 245, 1679, 2159, 2262, 2302, 2369
HpyF3I CTNAG 9 cut(s) 198, 620, 765, 794, 813, 1416, 1742, 1880, 2222
HpySE526I ACGT 1 cut(s) 1087
Hsp92I GRCGYC 1 cut(s) 2303
HspAI GCGC 1 cut(s) 2353
KspAI GTTAAC 1 cut(s) 175
Kzo9I GATC 4 cut(s) 365, 785, 1760, 2240
LmnI GCTCC 1 cut(s) 1348
Lsp1109I GCAGC 4 cut(s) 257, 1152, 1785, 2265
LweI GCATC 6 cut(s) 177, 778, 833, 1152, 1530, 2305
MaeI CTAG 4 cut(s) 119, 488, 542, 1071
MaeII ACGT 1 cut(s) 1087
MaeIII GTNAC 7 cut(s) 3, 1066, 1154, 1511, 1631, 2111, 2279
MalI GATC 4 cut(s) 367, 787, 1762, 2242
MbiI CCGCTC 2 cut(s) 1243, 1420
MboI GATC 4 cut(s) 365, 785, 1760, 2240
MboII GAAGA 9 cut(s) 47, 155, 158, 167, 371, 428, 564, 1826, 1856
MfeI CAATTG 3 cut(s) 610, 627, 1236
MflI RGATCY 1 cut(s) 365
MhlI GDGCHC 2 cut(s) 692, 2267
MlsI TGGCCA 4 cut(s) 1914, 1981, 2340, 2476
MluNI TGGCCA 4 cut(s) 1914, 1981, 2340, 2476
MlyI GAGTC 4 cut(s) 214, 1373, 1499, 1825
MmeI TCCRAC 2 cut(s) 880, 1484
Mox20I TGGCCA 4 cut(s) 1914, 1981, 2340, 2476
Mph1103I ATGCAT 2 cut(s) 826, 1167
MroXI GAANNNNTTC 2 cut(s) 497, 1308
MscI TGGCCA 4 cut(s) 1914, 1981, 2340, 2476
MslI CAYNNNNRTG 5 cut(s) 1640, 1914, 2120, 2289, 2340
Msp20I TGGCCA 4 cut(s) 1914, 1981, 2340, 2476
MspA1I CMGCKG 2 cut(s) 1750, 2230
MspCI CTTAAG 1 cut(s) 2509
MspI CCGG 4 cut(s) 71, 1045, 1315, 1852
MspR9I CCNGG 4 cut(s) 71, 869, 1852, 1853
MunI CAATTG 3 cut(s) 610, 627, 1236
Mva1269I GAATGC 2 cut(s) 86, 1457
MvaI CCWGG 1 cut(s) 869
MvnI CGCG 1 cut(s) 33
MwoI GCNNNNNNNGC 6 cut(s) 245, 1679, 2159, 2262, 2302, 2369
NciI CCSGG 3 cut(s) 71, 1852, 1853
NdeII GATC 4 cut(s) 365, 785, 1760, 2240
NlaIV GGNNCC 5 cut(s) 206, 348, 367, 746, 800
NmeAIII GCCGAG 2 cut(s) 1410, 2331
NmuCI GTSAC 5 cut(s) 3, 1066, 1154, 1511, 2279
NsbI TGCGCA 1 cut(s) 2354
NsiI ATGCAT 2 cut(s) 826, 1167
NspI RCATGY 3 cut(s) 852, 1639, 2119
OliI CACNNNNGTG 1 cut(s) 2289
PagI TCATGA 1 cut(s) 1527
PceI AGGCCT 1 cut(s) 1106
PciI ACATGT 2 cut(s) 1635, 2115
PctI GAATGC 2 cut(s) 86, 1457
PdmI GAANNNNTTC 2 cut(s) 497, 1308
PfeI GAWTC 6 cut(s) 1134, 1251, 1559, 1900, 2039, 2326
PflMI CCANNNNNTGG 5 cut(s) 754, 868, 1406, 1910, 2336
PinAI ACCGGT 1 cut(s) 1314
PkrI GCNGC 4 cut(s) 247, 1142, 1775, 2255
PleI GAGTC 4 cut(s) 214, 1372, 1498, 1825
PpsI GAGTC 4 cut(s) 214, 1372, 1498, 1825
PpuMI RGGWCCY 1 cut(s) 1257
PscI ACATGT 2 cut(s) 1635, 2115
PshAI GACNNNNGTC 1 cut(s) 612
PshBI ATTAAT 1 cut(s) 1356
PsiI TTATAA 1 cut(s) 252
Psp5II RGGWCCY 1 cut(s) 1257
Psp6I CCWGG 1 cut(s) 867
PspGI CCWGG 1 cut(s) 867
PspN4I GGNNCC 5 cut(s) 206, 348, 367, 746, 800
PspPI GGNCC 5 cut(s) 68, 346, 799, 1257, 1382
PspPPI RGGWCCY 1 cut(s) 1257
PstI CTGCAG 1 cut(s) 1142
PstNI CAGNNNCTG 1 cut(s) 868
PsuI RGATCY 1 cut(s) 365
PvuII CAGCTG 2 cut(s) 1750, 2230
RseI CAYNNNNRTG 5 cut(s) 1640, 1914, 2120, 2289, 2340
SatI GCNGC 4 cut(s) 246, 1141, 1774, 2254
Sau3AI GATC 4 cut(s) 365, 785, 1760, 2240
Sau96I GGNCC 5 cut(s) 68, 346, 799, 1257, 1382
ScaI AGTACT 2 cut(s) 373, 1028
SchI GAGTC 4 cut(s) 214, 1373, 1499, 1825
ScrFI CCNGG 4 cut(s) 71, 869, 1852, 1853
SduI GDGCHC 2 cut(s) 692, 2267
SfaNI GCATC 6 cut(s) 177, 778, 833, 1152, 1530, 2305
SfcI CTRYAG 4 cut(s) 1138, 1261, 1705, 2185
SinI GGWCC 3 cut(s) 346, 799, 1257
SmaI CCCGGG 1 cut(s) 1853
SmiMI CAYNNNNRTG 5 cut(s) 1640, 1914, 2120, 2289, 2340
SmlI CTYRAG 1 cut(s) 2509
SmoI CTYRAG 1 cut(s) 2509
SpeI ACTAGT 2 cut(s) 541, 1070
SrfI GCCCGGGC 1 cut(s) 1853
SseBI AGGCCT 1 cut(s) 1106
SsiI CCGC 7 cut(s) 31, 584, 1100, 1243, 1307, 1420, 2363
SspI AATATT 2 cut(s) 1611, 2091
SspMI CTAG 4 cut(s) 119, 488, 542, 1071
StuI AGGCCT 1 cut(s) 1106
StyD4I CCNGG 4 cut(s) 69, 867, 1850, 1851
TaaI ACNGT 7 cut(s) 16, 1193, 1485, 1597, 1656, 2077, 2136
TaiI ACGT 1 cut(s) 1090
TaqI TCGA 6 cut(s) 453, 522, 593, 650, 1114, 1842
TaqII GACCGA 1 cut(s) 336
TatI WGTACW 4 cut(s) 371, 937, 1026, 1077
TfiI GAWTC 6 cut(s) 1134, 1251, 1559, 1900, 2039, 2326
TseFI GTSAC 5 cut(s) 3, 1066, 1154, 1511, 2279
TseI GCWGC 4 cut(s) 245, 1140, 1773, 2253
Tsp45I GTSAC 5 cut(s) 3, 1066, 1154, 1511, 2279
TspDTI ATGAA 8 cut(s) 117, 1055, 1074, 1464, 1544, 1838, 1932, 2358
TspMI CCCGGG 1 cut(s) 1851
Van91I CCANNNNNTGG 5 cut(s) 754, 868, 1406, 1910, 2336
Vha464I CTTAAG 1 cut(s) 2509
VneI GTGCAC 1 cut(s) 688
VpaK11BI GGWCC 3 cut(s) 346, 799, 1257
VspI ATTAAT 1 cut(s) 1356
XagI CCTNNNNNAGG 1 cut(s) 812
XapI RAATTY 7 cut(s) 160, 406, 1171, 1500, 1532, 1825, 2412
XceI RCATGY 3 cut(s) 852, 1639, 2119
XmaI CCCGGG 1 cut(s) 1851
XmiI GTMKAC 1 cut(s) 760
XmnI GAANNNNTTC 2 cut(s) 497, 1308
XspI CTAG 4 cut(s) 119, 488, 542, 1071
ZrmI AGTACT 2 cut(s) 373, 1028
Zsp2I ATGCAT 2 cut(s) 826, 1167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.