RLG00000034403

Protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000074
Physical Location & Seq
Reverse (-)
42121833 .. 42126068
4236 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034403

Sequence Viewer

Length: 1014 bp
ATGGCGTACTTGTCCAAAATCCAGAGAGGCGGCCATATCCAGCCGTTCGGGTGCACAATTAGGGTGGAAGAGTCCACCTTCGGGGTCATTACCTACAGCGAGAACGCCCGGAACCTGCTCGACCTGATGGCTCAGTACGTTCCAGTGCTCGAGAGGCGGGAGATCCTCATAATCGGCTTGACATCCTCATGGCAGAGGCTGTTCTCCCTCACCATCTCCGATATAGGGAGAGAAATCATGGATGCGAGCGGCATGCGATTCAGTGAACCGAATTACCATGGTTGGTTTGTAGATGAGGATGACTTTTCAGATGAGTACGAAGAGTTATTCTCTGATGAGGAAGCTTCGCAGAGTGCAAATATGGATGAGAATCTGGATTGTCTACACTTCAATGGCAAGAAGTATGAAGATCTTAGATCCACTGATATGATTGGTGTTGAGTTTAGCAGCGTCAAGGCAGTTGACACATTCTATGCTTACTATTCACTTGCCATGGGCTTCAGTTTCCGAAAGGAAAAGTTGTGTCGAAATGCAGCACAAGTGGTGGTGAGAAGACATCCACCTCATGGGACAAAACCGGTCTGCAAGAGGAAGACAGTTAACCAGAAACCAATCGTGGAAGATGTTGATACAAGAAGTATGAAACGTTCTGGGAAGCAGTTTGGTGATGAGTTTGTTCCCTTCCTCCGATCCCACCTCAAGGTTCTGGACCATGACGTTGCTCAGGTAACAGCACTTAAGAAAGTCTCTGTTGGTACATGCCGAGCTTATGAGTTGTTGGTCCACCAAGCCGTGTTGCCACGCATGGACAAGACAATTGAACGCATCAAGTTTAATGGGCTTAACGATGACTTCAAATCAATGAACTCACACTCGGTTATTGGCAGCAACATATGGTGTATTCAACAACAGAGAACGAAGAGTCTTTTGTGGCTGCTGTTTAACCCTCGTCACGGGGTCAGGTTTGAGCTGTTTTCACCAACAAATATAGTTTACAAGTTAGAGCGGTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

338

Amino Acids

38.88

Weight (kDa)

7.14

Isoelectric Point (pI)

42.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAS_2 PF08446 2 - 45 3e-12 PAS fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 123
AccB7I CCANNNNNTGG 1 cut(s) 566
AccBSI CCGCTC 2 cut(s) 249, 1006
AccI GTMKAC 1 cut(s) 382
AciI CCGC 4 cut(s) 30, 157, 249, 1006
AclI AACGTT 1 cut(s) 646
AclWI GGATC 3 cut(s) 157, 411, 684
AcoI YGGCCR 1 cut(s) 31
AcuI CTGAAG 1 cut(s) 484
AfaI GTAC 4 cut(s) 8, 137, 317, 757
AfiI CCNNNNNNNGG 5 cut(s) 81, 225, 566, 700, 953
AflII CTTAAG 1 cut(s) 737
AgeI ACCGGT 1 cut(s) 577
AgsI TTSAA 4 cut(s) 391, 821, 856, 905
AluBI AGCT 3 cut(s) 344, 767, 970
AluI AGCT 3 cut(s) 344, 767, 970
Alw21I GWGCWC 2 cut(s) 56, 150
Alw26I GTCTC 1 cut(s) 751
Alw44I GTGCAC 1 cut(s) 52
AlwI GGATC 3 cut(s) 157, 411, 684
AlwNI CAGNNNCTG 1 cut(s) 199
Ama87I CYCGRG 1 cut(s) 149
AoxI GGCC 1 cut(s) 31
ApaLI GTGCAC 1 cut(s) 52
ApeKI GCWGC 4 cut(s) 447, 533, 885, 934
AsiGI ACCGGT 1 cut(s) 577
AspS9I GGNCC 2 cut(s) 709, 781
AsuC2I CCSGG 1 cut(s) 109
AsuHPI GGTGA 4 cut(s) 202, 559, 677, 969
AvaI CYCGRG 1 cut(s) 149
AvaII GGWCC 2 cut(s) 709, 781
BaeGI GKGCMC 1 cut(s) 56
BbsI GAAGAC 2 cut(s) 559, 599
Bbv12I GWGCWC 2 cut(s) 56, 150
BbvI GCAGC 4 cut(s) 459, 545, 897, 921
BccI CCATC 2 cut(s) 121, 221
BceAI ACGGC 2 cut(s) 28, 776
BcgI CGANNNNNNTGC 2 cut(s) 235, 269
BcnI CCSGG 1 cut(s) 109
BcoDI GTCTC 1 cut(s) 751
BfmI CTRYAG 1 cut(s) 94
BfrI CTTAAG 1 cut(s) 737
BfuAI ACCTGC 1 cut(s) 123
BglII AGATCT 1 cut(s) 409
BisI GCNGC 6 cut(s) 31, 250, 448, 534, 886, 935
BlsI GCNGC 6 cut(s) 32, 251, 449, 535, 887, 936
Bme1390I CCNGG 1 cut(s) 109
Bme18I GGWCC 2 cut(s) 709, 781
BmeT110I CYCGRG 1 cut(s) 149
BmgT120I GGNCC 2 cut(s) 709, 781
BmiI GGNNCC 1 cut(s) 113
BmrFI CCNGG 1 cut(s) 109
BmsI GCATC 2 cut(s) 232, 834
BpiI GAAGAC 2 cut(s) 559, 599
BplI GAGNNNNNCTC 2 cut(s) 314, 346
Bpu10I CCTNAGC 1 cut(s) 723
BpuEI CTTGAG 1 cut(s) 683
BpuMI CCSGG 1 cut(s) 109
BsaBI GATNNNNATC 1 cut(s) 369
BsaJI CCNNGG 2 cut(s) 277, 492
BsaWI WCCGGW 1 cut(s) 577
Bsc4I CCNNNNNNNGG 5 cut(s) 81, 225, 566, 700, 953
Bse118I RCCGGY 1 cut(s) 577
Bse1I ACTGG 1 cut(s) 143
Bse8I GATNNNNATC 1 cut(s) 369
BseDI CCNNGG 2 cut(s) 277, 492
BseGI GGATG 5 cut(s) 182, 247, 304, 370, 556
BseJI GATNNNNATC 1 cut(s) 369
BseLI CCNNNNNNNGG 5 cut(s) 81, 225, 566, 700, 953
BseMII CTCAG 2 cut(s) 146, 737
BseNI ACTGG 1 cut(s) 143
BseSI GKGCMC 1 cut(s) 56
BseXI GCAGC 4 cut(s) 459, 545, 897, 921
BshFI GGCC 1 cut(s) 33
BshTI ACCGGT 1 cut(s) 577
BsiHKAI GWGCWC 2 cut(s) 56, 150
BsiHKCI CYCGRG 1 cut(s) 149
BsiSI CCGG 2 cut(s) 109, 578
BslFI GGGAC 1 cut(s) 583
BslI CCNNNNNNNGG 5 cut(s) 81, 225, 566, 700, 953
BsmAI GTCTC 1 cut(s) 751
BsmFI GGGAC 1 cut(s) 583
BsnI GGCC 1 cut(s) 33
BsoBI CYCGRG 1 cut(s) 149
Bsp1286I GDGCHC 2 cut(s) 56, 150
Bsp143I GATC 4 cut(s) 162, 409, 416, 689
Bsp19I CCATGG 2 cut(s) 277, 492
BspACI CCGC 4 cut(s) 30, 157, 249, 1006
BspANI GGCC 1 cut(s) 33
BspCNI CTCAG 2 cut(s) 145, 736
BspLI GGNNCC 1 cut(s) 113
BspMI ACCTGC 1 cut(s) 123
BspPI GGATC 3 cut(s) 157, 411, 684
BspTI CTTAAG 1 cut(s) 737
BsrBI CCGCTC 2 cut(s) 249, 1006
BsrFI RCCGGY 1 cut(s) 577
BsrI ACTGG 1 cut(s) 143
BssAI RCCGGY 1 cut(s) 577
BssECI CCNNGG 2 cut(s) 277, 492
BssMI GATC 4 cut(s) 162, 409, 416, 689
BssT1I CCWWGG 2 cut(s) 277, 492
Bst4CI ACNGT 1 cut(s) 598
Bst6I CTCTTC 3 cut(s) 63, 315, 914
BstAFI CTTAAG 1 cut(s) 737
BstC8I GCNNGC 2 cut(s) 247, 254
BstDEI CTNAG 3 cut(s) 132, 413, 723
BstDSI CCRYGG 2 cut(s) 277, 492
BstF5I GGATG 5 cut(s) 182, 247, 304, 370, 556
BstKTI GATC 4 cut(s) 165, 412, 419, 692
BstMAI GTCTC 1 cut(s) 751
BstMBI GATC 4 cut(s) 162, 409, 416, 689
BstMWI GCNNNNNNNGC 1 cut(s) 154
BstNSI RCATGY 2 cut(s) 256, 762
BstSCI CCNGG 1 cut(s) 107
BstSFI CTRYAG 1 cut(s) 94
BstSLI GKGCMC 1 cut(s) 56
BstV1I GCAGC 4 cut(s) 459, 545, 897, 921
BstV2I GAAGAC 2 cut(s) 559, 599
BstX2I RGATCY 3 cut(s) 162, 409, 416
BstYI RGATCY 3 cut(s) 162, 409, 416
BsuRI GGCC 1 cut(s) 33
BtgI CCRYGG 2 cut(s) 277, 492
BtsCI GGATG 5 cut(s) 182, 247, 304, 370, 556
BtsIMutI CAGTG 3 cut(s) 150, 268, 420
BveI ACCTGC 1 cut(s) 123
Cac8I GCNNGC 2 cut(s) 247, 254
CaiI CAGNNNCTG 1 cut(s) 199
Cfr10I RCCGGY 1 cut(s) 577
Cfr13I GGNCC 2 cut(s) 709, 781
CseI GACGC 1 cut(s) 439
Csp6I GTAC 4 cut(s) 7, 136, 316, 756
CspAI ACCGGT 1 cut(s) 577
CspCI CAANNNNNGTGG 2 cut(s) 45, 80
CviAII CATG 9 cut(s) 189, 238, 253, 278, 493, 566, 713, 759, 805
CviQI GTAC 4 cut(s) 7, 136, 316, 756
DdeI CTNAG 3 cut(s) 132, 413, 723
DpnI GATC 4 cut(s) 164, 411, 418, 691
DpnII GATC 4 cut(s) 162, 409, 416, 689
EaeI YGGCCR 1 cut(s) 31
Eam1104I CTCTTC 3 cut(s) 63, 315, 914
EarI CTCTTC 3 cut(s) 63, 315, 914
Eco130I CCWWGG 2 cut(s) 277, 492
Eco47I GGWCC 2 cut(s) 709, 781
Eco57I CTGAAG 1 cut(s) 484
Eco88I CYCGRG 1 cut(s) 149
EcoT14I CCWWGG 2 cut(s) 277, 492
ErhI CCWWGG 2 cut(s) 277, 492
FaeI CATG 9 cut(s) 192, 241, 256, 281, 496, 569, 716, 762, 808
FaqI GGGAC 1 cut(s) 583
FatI CATG 9 cut(s) 188, 237, 252, 277, 492, 565, 712, 758, 804
FauI CCCGC 1 cut(s) 150
FauNDI CATATG 1 cut(s) 893
FblI GTMKAC 1 cut(s) 382
Fnu4HI GCNGC 6 cut(s) 31, 250, 448, 534, 886, 935
FokI GGATG 5 cut(s) 169, 254, 311, 377, 543
Fsp4HI GCNGC 6 cut(s) 31, 250, 448, 534, 886, 935
GluI GCNGC 6 cut(s) 31, 250, 448, 534, 886, 935
HaeIII GGCC 1 cut(s) 33
HapII CCGG 2 cut(s) 109, 578
HgaI GACGC 1 cut(s) 439
Hin1II CATG 9 cut(s) 192, 241, 256, 281, 496, 569, 716, 762, 808
HincII GTYRAC 2 cut(s) 463, 601
HindII GTYRAC 2 cut(s) 463, 601
HindIII AAGCTT 1 cut(s) 342
HinfI GANTC 4 cut(s) 71, 258, 370, 922
HpaI GTTAAC 1 cut(s) 601
HpaII CCGG 2 cut(s) 109, 578
HphI GGTGA 4 cut(s) 202, 559, 677, 969
Hpy166II GTNNAC 8 cut(s) 54, 75, 266, 383, 463, 601, 784, 994
Hpy188I TCNGA 5 cut(s) 220, 310, 334, 509, 689
Hpy188III TCNNGA 4 cut(s) 22, 151, 374, 707
Hpy8I GTNNAC 8 cut(s) 54, 75, 266, 383, 463, 601, 784, 994
HpyAV CCTTC 2 cut(s) 88, 691
HpyCH4III ACNGT 1 cut(s) 598
HpyCH4IV ACGT 3 cut(s) 138, 646, 717
HpyCH4V TGCA 4 cut(s) 54, 356, 533, 585
HpyF10VI GCNNNNNNNGC 1 cut(s) 154
HpyF3I CTNAG 3 cut(s) 132, 413, 723
HpySE526I ACGT 3 cut(s) 138, 646, 717
Hsp92II CATG 9 cut(s) 192, 241, 256, 281, 496, 569, 716, 762, 808
KspAI GTTAAC 1 cut(s) 601
Kzo9I GATC 4 cut(s) 162, 409, 416, 689
Lsp1109I GCAGC 4 cut(s) 459, 545, 897, 921
LweI GCATC 2 cut(s) 232, 834
MaeII ACGT 3 cut(s) 138, 646, 717
MaeIII GTNAC 2 cut(s) 727, 950
MalI GATC 4 cut(s) 164, 411, 418, 691
MbiI CCGCTC 2 cut(s) 249, 1006
MboI GATC 4 cut(s) 162, 409, 416, 689
MboII GAAGA 7 cut(s) 80, 332, 419, 564, 604, 632, 931
MfeI CAATTG 1 cut(s) 816
MflI RGATCY 3 cut(s) 162, 409, 416
MhlI GDGCHC 2 cut(s) 56, 150
MluCI AATT 3 cut(s) 57, 271, 816
MlyI GAGTC 2 cut(s) 80, 931
MseI TTAA 5 cut(s) 600, 738, 834, 843, 942
MslI CAYNNNNRTG 3 cut(s) 187, 390, 425
MspCI CTTAAG 1 cut(s) 737
MspI CCGG 2 cut(s) 109, 578
MspR9I CCNGG 1 cut(s) 109
MunI CAATTG 1 cut(s) 816
MwoI GCNNNNNNNGC 1 cut(s) 154
NciI CCSGG 1 cut(s) 109
NcoI CCATGG 2 cut(s) 277, 492
NdeI CATATG 1 cut(s) 893
NdeII GATC 4 cut(s) 162, 409, 416, 689
NlaIII CATG 9 cut(s) 192, 241, 256, 281, 496, 569, 716, 762, 808
NlaIV GGNNCC 1 cut(s) 113
NmeAIII GCCGAG 1 cut(s) 788
NmuCI GTSAC 1 cut(s) 950
NspI RCATGY 2 cut(s) 256, 762
PaeI GCATGC 1 cut(s) 256
PaeR7I CTCGAG 1 cut(s) 149
PfeI GAWTC 2 cut(s) 258, 370
PflMI CCANNNNNTGG 1 cut(s) 566
PinAI ACCGGT 1 cut(s) 577
PkrI GCNGC 6 cut(s) 32, 251, 449, 535, 887, 936
PleI GAGTC 2 cut(s) 79, 930
PpsI GAGTC 2 cut(s) 79, 930
Psp1406I AACGTT 1 cut(s) 646
PspN4I GGNNCC 1 cut(s) 113
PspPI GGNCC 2 cut(s) 709, 781
PsrI GAACNNNNNNTAC 2 cut(s) 631, 663
PstNI CAGNNNCTG 1 cut(s) 199
PsuI RGATCY 3 cut(s) 162, 409, 416
RsaI GTAC 4 cut(s) 8, 137, 317, 757
RsaNI GTAC 4 cut(s) 7, 136, 316, 756
RseI CAYNNNNRTG 3 cut(s) 187, 390, 425
SaqAI TTAA 5 cut(s) 600, 738, 834, 843, 942
SatI GCNGC 6 cut(s) 31, 250, 448, 534, 886, 935
Sau3AI GATC 4 cut(s) 162, 409, 416, 689
Sau96I GGNCC 2 cut(s) 709, 781
SchI GAGTC 2 cut(s) 80, 931
ScrFI CCNGG 1 cut(s) 109
SduI GDGCHC 2 cut(s) 56, 150
SfaNI GCATC 2 cut(s) 232, 834
SfcI CTRYAG 1 cut(s) 94
Sfr274I CTCGAG 1 cut(s) 149
SinI GGWCC 2 cut(s) 709, 781
SlaI CTCGAG 1 cut(s) 149
SmiMI CAYNNNNRTG 3 cut(s) 187, 390, 425
SmlI CTYRAG 3 cut(s) 149, 698, 737
SmoI CTYRAG 3 cut(s) 149, 698, 737
SphI GCATGC 1 cut(s) 256
Sse9I AATT 3 cut(s) 57, 271, 816
SsiI CCGC 4 cut(s) 30, 157, 249, 1006
StyD4I CCNGG 1 cut(s) 107
StyI CCWWGG 2 cut(s) 277, 492
TaaI ACNGT 1 cut(s) 598
TaiI ACGT 3 cut(s) 141, 649, 720
TaqI TCGA 3 cut(s) 120, 150, 526
TasI AATT 3 cut(s) 57, 271, 816
TauI GCSGC 2 cut(s) 33, 252
TfiI GAWTC 2 cut(s) 258, 370
Tru1I TTAA 5 cut(s) 600, 738, 834, 843, 942
Tru9I TTAA 5 cut(s) 600, 738, 834, 843, 942
TscAI CASTG 3 cut(s) 150, 268, 427
TseFI GTSAC 1 cut(s) 950
TseI GCWGC 4 cut(s) 447, 533, 885, 934
Tsp45I GTSAC 1 cut(s) 950
TspDTI ATGAA 3 cut(s) 420, 656, 878
TspRI CASTG 3 cut(s) 150, 268, 427
Van91I CCANNNNNTGG 1 cut(s) 566
Vha464I CTTAAG 1 cut(s) 737
VneI GTGCAC 1 cut(s) 52
VpaK11BI GGWCC 2 cut(s) 709, 781
XceI RCATGY 2 cut(s) 256, 762
XhoI CTCGAG 1 cut(s) 149
XmiI GTMKAC 1 cut(s) 382
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.