RchiOBHm_Chr6g0268121

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000074
Physical Location & Seq
Forward (+)
24960907 .. 24967214
6308 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ24048

Sequence Viewer

Length: 1254 bp
ATGGAGAGTGGATTGCGATATTCTGAACATAAGTACTACGATTCTCTCATGGATCTGAACAGTGAGGAAGGATCTATCAATGGAAGTTCAGATGCAGATATGGAAAACACAGATTTTACAAAAGAGGAAGATATGCAGGATTTCACATTATTCAGGGGGAAGCCATATCAGGATTTGACATTAGATGATTTGAAGGAAGTTGAGTTTAATACGATTGAGGAGGTCGACAGATTCTACAATTACTATTCATTGGCAAAGGGGTTCAGTATGAGGAAGTATAAGCAGGACAAGAACCGTGCAGGTACACTGATCATTCGAAGGCAGCTTGTGTGTTCGAGGCAAGGACAGAGAAAACAATGGACTGTGTTGTACCAGCCTGATGAGAACAATCCTTCTTTTGTTTGTTCTTGCAAACTATTCGAGTCTGATGGAATTCCTTGTTGTCACATTTTTGCTGTCATAAAAAATGAGCAGATTACAACATTACCAGAATCCTTGGTGAACAAGAGGTGGACTAAAGAGGCCATGGTTAGGAAGACCTTGTCAACTTTTAAGGAGGTTCCTGACAAATATGTGCAGATTGCACGGTATGGTGAATTGATGTCCCAATGTGCTAAATTCTGCCATCGTGCATCCTATAGCGATGAGGGCTATGATGAGATGAGGGAAGCTTTGAATCTTCTCACCATCCGCTCAGAAGAGTATAGTGCAGGAATCCTAGACAACCTGGAGGATGAGCACTTTGAGGGTCTGCATCCCAATGTCATCAAGGACCCAGTCGTGTGTAGGACAAAAGGATCAAAACACACTAATGCGGAATGCAGGGAACATTTTAGTTCCAATGATCAACCCAAAGTAGGTGGAAAATGCACAAAATGTCAACAACGGGGACACAACAAGCGAACTTGTGGGAGGGAAAACAAATTGGGTGCTTCTGATGCCAAGAGTCCCACACCAACTAAGGTTGTATCTGTTACATGTAGTGAAGGTTTAGAGGATGATGTTTATGATGATGGCACAAGTGACGTCAATTTTGATGAATTCAAAGACGGCGAATTCACTAAAAGACAGTCCTCGAATTTGATGCGTCACGTGGAAGAAGTTCGCCCATTCGAGTTTTTTGCTGGGTATGATATAAGTGAAAATGAAGGTTCTAATACAAACTGTACCAGAGTTCCCAATTTCTTTCAACATTTCAGGCCCTTCCCCAACGATGAGGGCTACGACGGTGCGTCACACAGTGATGACAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

417

Amino Acids

47.97

Weight (kDa)

5.13

Isoelectric Point (pI)

43.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 77 - 137 1.5e-07 FAR1 DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1029
Acc36I ACCTGC 1 cut(s) 290
AccBSI CCGCTC 1 cut(s) 693
AccI GTMKAC 1 cut(s) 225
AciI CCGC 2 cut(s) 691, 815
AclWI GGATC 3 cut(s) 60, 79, 805
AcsI RAATTY 5 cut(s) 432, 617, 1040, 1055, 1078
AcvI CACGTG 1 cut(s) 1093
AcyI GRCGYC 1 cut(s) 1026
AdeI CACNNNGTG 1 cut(s) 1241
AfaI GTAC 4 cut(s) 35, 304, 371, 1168
AfiI CCNNNNNNNGG 2 cut(s) 531, 857
AflIII ACRYGT 1 cut(s) 977
AgsI TTSAA 4 cut(s) 193, 676, 1045, 1190
AhdI GACNNNNNGTC 1 cut(s) 1231
AjnI CCWGG 1 cut(s) 726
AluBI AGCT 2 cut(s) 325, 671
AluI AGCT 2 cut(s) 325, 671
Alw21I GWGCWC 1 cut(s) 741
AlwI GGATC 3 cut(s) 60, 79, 805
AoxI GGCC 2 cut(s) 522, 1199
ApeKI GCWGC 1 cut(s) 322
ApoI RAATTY 5 cut(s) 432, 617, 1040, 1055, 1078
ArsI GACNNNNNNTTYG 2 cut(s) 1016, 1048
Asp700I GAANNNNTTC 1 cut(s) 1101
AspS9I GGNCC 2 cut(s) 772, 1200
AsuHPI GGTGA 3 cut(s) 511, 605, 676
AsuII TTCGAA 1 cut(s) 316
AvaII GGWCC 1 cut(s) 772
BbrPI CACGTG 1 cut(s) 1093
BbsI GAAGAC 1 cut(s) 542
Bbv12I GWGCWC 1 cut(s) 741
BbvI GCAGC 1 cut(s) 334
BccI CCATC 4 cut(s) 422, 633, 695, 1007
BceAI ACGGC 1 cut(s) 1066
BcgI CGANNNNNNTGC 6 cut(s) 400, 434, 1066, 1100, 1103, 1137
BciT130I CCWGG 1 cut(s) 728
BclI TGATCA 2 cut(s) 309, 844
BfaI CTAG 1 cut(s) 719
BfmI CTRYAG 1 cut(s) 637
BfuAI ACCTGC 1 cut(s) 290
BisI GCNGC 1 cut(s) 323
BlsI GCNGC 1 cut(s) 324
BmcAI AGTACT 1 cut(s) 35
Bme1390I CCNGG 1 cut(s) 728
Bme18I GGWCC 1 cut(s) 772
BmeRI GACNNNNNGTC 1 cut(s) 1231
BmgT120I GGNCC 2 cut(s) 772, 1200
BmiI GGNNCC 2 cut(s) 561, 774
BmrFI CCNGG 1 cut(s) 728
BmrI ACTGGG 1 cut(s) 770
BmsI GCATC 5 cut(s) 82, 641, 763, 928, 1074
BmuI ACTGGG 1 cut(s) 770
BpiI GAAGAC 1 cut(s) 542
BpmI CTGGAG 1 cut(s) 749
Bpu14I TTCGAA 1 cut(s) 316
BsaAI YACGTR 1 cut(s) 1093
BsaHI GRCGYC 1 cut(s) 1026
BsaJI CCNNGG 2 cut(s) 495, 525
Bsc4I CCNNNNNNNGG 2 cut(s) 531, 857
Bse1I ACTGG 1 cut(s) 776
BseBI CCWGG 1 cut(s) 728
BseDI CCNNGG 2 cut(s) 495, 525
BseGI GGATG 5 cut(s) 632, 687, 739, 754, 1003
BseLI CCNNNNNNNGG 2 cut(s) 531, 857
BseMII CTCAG 1 cut(s) 708
BseNI ACTGG 1 cut(s) 776
BseRI GAGGAG 1 cut(s) 233
BseXI GCAGC 1 cut(s) 334
BseYI CCCAGC 1 cut(s) 1124
BsgI GTGCAG 3 cut(s) 318, 596, 729
BshFI GGCC 2 cut(s) 524, 1201
BsiHKAI GWGCWC 1 cut(s) 741
BslFI GGGAC 3 cut(s) 589, 903, 933
BslI CCNNNNNNNGG 2 cut(s) 531, 857
BsmFI GGGAC 3 cut(s) 589, 903, 933
BsmI GAATGC 1 cut(s) 824
BsnI GGCC 2 cut(s) 524, 1201
Bsp119I TTCGAA 1 cut(s) 316
Bsp1286I GDGCHC 1 cut(s) 741
Bsp143I GATC 5 cut(s) 52, 71, 309, 797, 844
Bsp19I CCATGG 1 cut(s) 525
BspACI CCGC 2 cut(s) 691, 815
BspANI GGCC 2 cut(s) 524, 1201
BspCNI CTCAG 1 cut(s) 707
BspLI GGNNCC 2 cut(s) 561, 774
BspMI ACCTGC 1 cut(s) 290
BspPI GGATC 3 cut(s) 60, 79, 805
BspT104I TTCGAA 1 cut(s) 316
BsrBI CCGCTC 1 cut(s) 693
BsrI ACTGG 1 cut(s) 776
BssECI CCNNGG 2 cut(s) 495, 525
BssMI GATC 5 cut(s) 52, 71, 309, 797, 844
BssNI GRCGYC 1 cut(s) 1026
BssT1I CCWWGG 2 cut(s) 495, 525
Bst2UI CCWGG 1 cut(s) 728
Bst4CI ACNGT 8 cut(s) 62, 296, 364, 588, 1071, 1166, 1229, 1241
Bst6I CTCTTC 1 cut(s) 693
BstACI GRCGYC 1 cut(s) 1026
BstBAI YACGTR 1 cut(s) 1093
BstBI TTCGAA 1 cut(s) 316
BstDEI CTNAG 2 cut(s) 694, 960
BstDSI CCRYGG 1 cut(s) 525
BstF5I GGATG 5 cut(s) 632, 687, 739, 754, 1003
BstKTI GATC 5 cut(s) 55, 74, 312, 800, 847
BstMBI GATC 5 cut(s) 52, 71, 309, 797, 844
BstMWI GCNNNNNNNGC 2 cut(s) 648, 938
BstNI CCWGG 1 cut(s) 728
BstNSI RCATGY 1 cut(s) 981
BstSCI CCNGG 1 cut(s) 726
BstSFI CTRYAG 1 cut(s) 637
BstV1I GCAGC 1 cut(s) 334
BstV2I GAAGAC 1 cut(s) 542
BstX2I RGATCY 2 cut(s) 52, 71
BstYI RGATCY 2 cut(s) 52, 71
BsuRI GGCC 2 cut(s) 524, 1201
BtgI CCRYGG 1 cut(s) 525
BtgZI GCGATG 1 cut(s) 657
BtsCI GGATG 5 cut(s) 632, 687, 739, 754, 1003
BtsIMutI CAGTG 3 cut(s) 67, 305, 1246
BveI ACCTGC 1 cut(s) 290
Cfr13I GGNCC 2 cut(s) 772, 1200
CseI GACGC 2 cut(s) 1076, 1221
Csp6I GTAC 4 cut(s) 34, 303, 370, 1167
CspCI CAANNNNNGTGG 2 cut(s) 841, 876
CviAII CATG 3 cut(s) 49, 526, 978
CviJI RGCY 8 cut(s) 163, 325, 376, 524, 651, 671, 1201, 1221
CviKI_1 RGCY 8 cut(s) 163, 325, 376, 524, 651, 671, 1201, 1221
CviQI GTAC 4 cut(s) 34, 303, 370, 1167
DdeI CTNAG 2 cut(s) 694, 960
DpnI GATC 5 cut(s) 54, 73, 311, 799, 846
DpnII GATC 5 cut(s) 52, 71, 309, 797, 844
DraIII CACNNNGTG 1 cut(s) 1241
DriI GACNNNNNGTC 1 cut(s) 1231
Eam1104I CTCTTC 1 cut(s) 693
Eam1105I GACNNNNNGTC 1 cut(s) 1231
EarI CTCTTC 1 cut(s) 693
Eco130I CCWWGG 2 cut(s) 495, 525
Eco47I GGWCC 1 cut(s) 772
Eco72I CACGTG 1 cut(s) 1093
EcoO109I RGGNCCY 2 cut(s) 772, 1200
EcoRI GAATTC 3 cut(s) 432, 1040, 1055
EcoRII CCWGG 1 cut(s) 726
EcoT14I CCWWGG 2 cut(s) 495, 525
ErhI CCWWGG 2 cut(s) 495, 525
FaeI CATG 3 cut(s) 52, 529, 981
FaqI GGGAC 3 cut(s) 589, 903, 933
FatI CATG 3 cut(s) 48, 525, 977
FbaI TGATCA 2 cut(s) 309, 844
FblI GTMKAC 1 cut(s) 225
Fnu4HI GCNGC 1 cut(s) 323
FokI GGATG 5 cut(s) 619, 674, 741, 746, 1010
Fsp4HI GCNGC 1 cut(s) 323
FspBI CTAG 1 cut(s) 719
GluI GCNGC 1 cut(s) 323
GsaI CCCAGC 1 cut(s) 1128
GsuI CTGGAG 1 cut(s) 749
HaeIII GGCC 2 cut(s) 524, 1201
HgaI GACGC 2 cut(s) 1076, 1221
Hin1I GRCGYC 1 cut(s) 1026
Hin1II CATG 3 cut(s) 52, 529, 981
HincII GTYRAC 3 cut(s) 226, 546, 881
HindII GTYRAC 3 cut(s) 226, 546, 881
HindIII AAGCTT 1 cut(s) 669
HinfI GANTC 7 cut(s) 41, 231, 422, 491, 676, 714, 946
HphI GGTGA 3 cut(s) 511, 605, 676
Hpy166II GTNNAC 6 cut(s) 226, 305, 502, 513, 546, 881
Hpy188I TCNGA 6 cut(s) 25, 57, 91, 427, 697, 937
Hpy188III TCNNGA 2 cut(s) 170, 563
Hpy8I GTNNAC 6 cut(s) 226, 305, 502, 513, 546, 881
Hpy99I CGWCG 1 cut(s) 1229
HpyAV CCTTC 7 cut(s) 62, 187, 312, 402, 980, 1142, 1213
HpyCH4III ACNGT 8 cut(s) 62, 296, 364, 588, 1071, 1166, 1229, 1241
HpyCH4IV ACGT 2 cut(s) 1026, 1092
HpyF10VI GCNNNNNNNGC 2 cut(s) 648, 938
HpyF3I CTNAG 2 cut(s) 694, 960
HpySE526I ACGT 2 cut(s) 1026, 1092
Hsp92I GRCGYC 1 cut(s) 1026
Hsp92II CATG 3 cut(s) 52, 529, 981
Ksp22I TGATCA 2 cut(s) 309, 844
Kzo9I GATC 5 cut(s) 52, 71, 309, 797, 844
Lsp1109I GCAGC 1 cut(s) 334
LweI GCATC 5 cut(s) 82, 641, 763, 928, 1074
MaeI CTAG 1 cut(s) 719
MaeII ACGT 2 cut(s) 1026, 1092
MaeIII GTNAC 5 cut(s) 443, 973, 1022, 1088, 1233
MalI GATC 5 cut(s) 54, 73, 311, 799, 846
MbiI CCGCTC 1 cut(s) 693
MboI GATC 5 cut(s) 52, 71, 309, 797, 844
MboII GAAGA 5 cut(s) 140, 547, 671, 710, 1109
MflI RGATCY 2 cut(s) 52, 71
MhlI GDGCHC 1 cut(s) 741
MlyI GAGTC 2 cut(s) 431, 955
MroXI GAANNNNTTC 1 cut(s) 1101
MseI TTAA 3 cut(s) 207, 552, 1252
MslI CAYNNNNRTG 3 cut(s) 759, 810, 1242
MspR9I CCNGG 1 cut(s) 728
Mva1269I GAATGC 1 cut(s) 824
MvaI CCWGG 1 cut(s) 728
MwoI GCNNNNNNNGC 2 cut(s) 648, 938
NcoI CCATGG 1 cut(s) 525
NdeII GATC 5 cut(s) 52, 71, 309, 797, 844
NlaIII CATG 3 cut(s) 52, 529, 981
NlaIV GGNNCC 2 cut(s) 561, 774
NmuCI GTSAC 4 cut(s) 443, 1022, 1088, 1233
NspI RCATGY 1 cut(s) 981
NspV TTCGAA 1 cut(s) 316
PciI ACATGT 1 cut(s) 977
PctI GAATGC 1 cut(s) 824
PdmI GAANNNNTTC 1 cut(s) 1101
PfeI GAWTC 5 cut(s) 41, 231, 491, 676, 714
PflFI GACNNNGTC 2 cut(s) 541, 776
PkrI GCNGC 1 cut(s) 324
PleI GAGTC 2 cut(s) 430, 954
PmaCI CACGTG 1 cut(s) 1093
PmlI CACGTG 1 cut(s) 1093
PpsI GAGTC 2 cut(s) 430, 954
Ppu21I YACGTR 1 cut(s) 1093
PpuMI RGGWCCY 1 cut(s) 772
PscI ACATGT 1 cut(s) 977
Psp5II RGGWCCY 1 cut(s) 772
Psp6I CCWGG 1 cut(s) 726
PspCI CACGTG 1 cut(s) 1093
PspFI CCCAGC 1 cut(s) 1124
PspGI CCWGG 1 cut(s) 726
PspN4I GGNNCC 2 cut(s) 561, 774
PspPI GGNCC 2 cut(s) 772, 1200
PspPPI RGGWCCY 1 cut(s) 772
PsuI RGATCY 2 cut(s) 52, 71
PsyI GACNNNGTC 2 cut(s) 541, 776
RsaI GTAC 4 cut(s) 35, 304, 371, 1168
RsaNI GTAC 4 cut(s) 34, 303, 370, 1167
RseI CAYNNNNRTG 3 cut(s) 759, 810, 1242
SalI GTCGAC 1 cut(s) 224
SaqAI TTAA 3 cut(s) 207, 552, 1252
SatI GCNGC 1 cut(s) 323
Sau3AI GATC 5 cut(s) 52, 71, 309, 797, 844
Sau96I GGNCC 2 cut(s) 772, 1200
ScaI AGTACT 1 cut(s) 35
SchI GAGTC 2 cut(s) 431, 955
ScrFI CCNGG 1 cut(s) 728
SduI GDGCHC 1 cut(s) 741
SfaNI GCATC 5 cut(s) 82, 641, 763, 928, 1074
SfcI CTRYAG 1 cut(s) 637
SfuI TTCGAA 1 cut(s) 316
SinI GGWCC 1 cut(s) 772
SmiMI CAYNNNNRTG 3 cut(s) 759, 810, 1242
SsiI CCGC 2 cut(s) 691, 815
SspMI CTAG 1 cut(s) 719
StyD4I CCNGG 1 cut(s) 726
StyI CCWWGG 2 cut(s) 495, 525
TaaI ACNGT 8 cut(s) 62, 296, 364, 588, 1071, 1166, 1229, 1241
TaiI ACGT 2 cut(s) 1029, 1095
TaqI TCGA 6 cut(s) 225, 316, 335, 420, 1076, 1113
TatI WGTACW 1 cut(s) 33
TfiI GAWTC 5 cut(s) 41, 231, 491, 676, 714
Tru1I TTAA 3 cut(s) 207, 552, 1252
Tru9I TTAA 3 cut(s) 207, 552, 1252
TscAI CASTG 3 cut(s) 67, 312, 1246
TseFI GTSAC 4 cut(s) 443, 1022, 1088, 1233
TseI GCWGC 1 cut(s) 322
Tsp45I GTSAC 4 cut(s) 443, 1022, 1088, 1233
TspDTI ATGAA 3 cut(s) 237, 1053, 1161
TspRI CASTG 3 cut(s) 67, 312, 1246
Tth111I GACNNNGTC 2 cut(s) 541, 776
VpaK11BI GGWCC 1 cut(s) 772
XapI RAATTY 5 cut(s) 432, 617, 1040, 1055, 1078
XceI RCATGY 1 cut(s) 981
XmiI GTMKAC 1 cut(s) 225
XmnI GAANNNNTTC 1 cut(s) 1101
XspI CTAG 1 cut(s) 719
ZraI GACGTC 1 cut(s) 1027
ZrmI AGTACT 1 cut(s) 35
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.