FvH4_4g15981

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000074
Physical Location & Seq
Forward (+)
19928016 .. 19940083
12068 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g15981.t1

Sequence Viewer

Length: 1842 bp
ATGAAGCAGAGCGGCAATCTCATGCCGCGGTGTTGTGGGGAGAAGCTGTGGAAAAGGTCGCCGTTGTCCGCCAGGAGAGCGGCTCGAGTAGCGAGCCCTTACGGTGCCATCGTCGGACGGGCTGTTTGGACCTTGATAGCTTTAGTCCTTGATAGGTGCAATCTCGTTCAATTGGGTGAGATTGCGGTGGTTGATGGAGTGTCGAGGATAGGGAAGAGTGCGACGGTTGACAGGGTTTGGATCAATGGTCTAAAAGGCGCTAGGCGGGCGGCGACCCATAGCCTAGCGCCTGGACAGCCTAGGCGGGGACTAGCCTGGGCGGCGCCTAGGCGAAGCAAGGCGGCGCCTAGGCGAAGCAAGGCGGCGCCTTTTAGAACCTTGGTTTGGATATCTTTTTGGGCAGGTCTGGTTGGCGGGTCTAAGGTGGGACGGTGGCGACAAGTTCTTGTTGTTGAGGCTAGGATCTTTTGGACCCCGGTTCAGCCACTCCTCCGCCTGTACCCCACCTTCCTCTCCGCCGCATTGGTCCCCTCCCCTCCAGAAACAAATAAAAGCCTCCCTTGGCCCGACCCGATACCCAATGAAGGATCAAGAAGGCAAAAGCAAAGTATCCGACAGAGAATGTCGTCTACTAGTCGTGCCGAAGTGGATACAGAGAACATGGACACGGATGAAGGGGGAGTACACTATACTGACCACCTTTATTTTGACATTGTAACTTCGGATGACGATGAGCCCGAAGTGGAAATGTCGAGCATGGTTGGTAGGTGCCCGGAGGTGACGTCGCGCACGAATGAGGGAACTGATGGGACACCACCTACTGAATCGGATGTATACTTCCCAATTGTTTTAGAGGTAGAACGGTTCTACTATTTGTACTTAAGAATCGTTAGGTTCAGCACCGGAAAAAAGAAGGGTCAGGATGTGAACCTCGAAGCGAAGGCCGGGGAGAAGAGATCGAGGAGGGGCCTTGTATCTAGGGGAGTGAGGTACACAAGAGTGGGCTGCCTTGTTGAGTTTGCCGTGAGATACTGCAACGAGAAAAGAATGTACCATGTGAGACATTTTGTTCACAAGCACAGTCACGAACTCAGACAGCCTAACGAGGTTCACTTCTTGCGGTCAAACCGAAATGTTGAGGATAGAGATGCCGCTCAGGTGCAGTGGCTCCGTGGAGCACAGGTCCACACAAGTAGGGCTTTCGAGAAGTACACTCTGATATCTGAAATGATGCCAAGAATGGAGAGGTCAGTCAGTCGCATCAGGGACCGGGTACTTTATGACAACTTCAGGCAGAAAAACTCGGCACCTGTATTTGAGACGCAAATGAGGGGGGTAGAGGAGGATGCATGTAGGCTGTTCACGTATGACATCTTCATAATGATCAAGTCTAAGATCTTGTTCGAGAAGCAGTTTGTTATTGTCCATCGGGCACCCTTTCCTCTGACAGACACGGTGGTGTTCTACATTGCCCAATACGACAGGCCTCACCGACGATGGAGTGTTGAGTTCCAGTCTGACGGGACAAACCCTTTGATATCTTGCTCTTGTAAACAGTTTGAGTCAGATGGTGTCCCCTGCTGCCATATCTTCTATGTAATGAAAGATCAGCTTGTTCCAGTTGACAACAAGGCGGCACAAGTGACCAGGTATTCTGCTTTCGTATCAGAAGCGTCGAAAGCATGCTCTAACTACTCATTTTCAGAAGAAGGATTCAGGGTGGGAATGGACGAGCTTGCAAGGTTGGTTCAGAGCTCAATCGAGTTCAGGGTGAATCCACCGGCGGTAGACGCATCTAACTTGCCTCCCAACAACGTTGTCAGGGACCCGCAGATAGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

614

Amino Acids

69.86

Weight (kDa)

9.57

Isoelectric Point (pI)

55.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 785
Acc36I ACCTGC 1 cut(s) 392
AccB1I GGYRCC 7 cut(s) 104, 322, 343, 364, 768, 1306, 1432
AccBSI CCGCTC 3 cut(s) 12, 80, 1154
AccI GTMKAC 3 cut(s) 629, 834, 1788
AccII CGCG 2 cut(s) 28, 787
AclI AACGTT 1 cut(s) 1815
AclWI GGATC 3 cut(s) 248, 470, 595
AcuI CTGAAG 1 cut(s) 1273
AcyI GRCGYC 4 cut(s) 323, 344, 365, 782
AfaI GTAC 7 cut(s) 500, 684, 878, 992, 1052, 1211, 1275
AfiI CCNNNNNNNGG 3 cut(s) 305, 384, 584
AflII CTTAAG 1 cut(s) 880
AgsI TTSAA 1 cut(s) 170
AhlI ACTAGT 1 cut(s) 632
AjnI CCWGG 4 cut(s) 71, 289, 314, 1646
AjuI GAANNNNNNNTTGG 2 cut(s) 367, 399
AleI CACNNNNGTG 2 cut(s) 998, 1457
AluBI AGCT 5 cut(s) 46, 140, 1612, 1735, 1755
AluI AGCT 5 cut(s) 46, 140, 1612, 1735, 1755
Alw21I GWGCWC 2 cut(s) 1180, 1757
Alw26I GTCTC 2 cut(s) 1054, 1313
AlwI GGATC 3 cut(s) 248, 470, 595
Ama87I CYCGRG 1 cut(s) 84
AoxI GGCC 4 cut(s) 563, 942, 967, 1484
ApeKI GCWGC 2 cut(s) 1005, 1581
ArsI GACNNNNNNTTYG 4 cut(s) 108, 140, 1516, 1548
AspA2I CCTAGG 3 cut(s) 299, 326, 347
AspLEI GCGC 6 cut(s) 260, 289, 325, 346, 367, 789
AspS9I GGNCC 8 cut(s) 129, 471, 526, 564, 967, 1183, 1267, 1825
AsuC2I CCSGG 4 cut(s) 476, 773, 946, 1271
AsuHPI GGTGA 4 cut(s) 188, 790, 1481, 1783
AvaI CYCGRG 1 cut(s) 84
AvaII GGWCC 6 cut(s) 129, 471, 526, 1183, 1267, 1825
AvrII CCTAGG 3 cut(s) 299, 326, 347
BaeGI GKGCMC 2 cut(s) 773, 1435
BanI GGYRCC 7 cut(s) 104, 322, 343, 364, 768, 1306, 1432
BanII GRGCYC 3 cut(s) 98, 738, 1757
BarI GAAGNNNNNNTAC 6 cut(s) 491, 523, 666, 698, 1358, 1390
Bbv12I GWGCWC 2 cut(s) 1180, 1757
BbvI GCAGC 2 cut(s) 992, 1568
BccI CCATC 6 cut(s) 116, 188, 800, 1434, 1491, 1562
BceAI ACGGC 2 cut(s) 46, 1007
BciT130I CCWGG 4 cut(s) 73, 291, 316, 1648
BciVI GTATCC 2 cut(s) 620, 643
BclI TGATCA 1 cut(s) 1383
BcnI CCSGG 4 cut(s) 476, 773, 946, 1271
BcoDI GTCTC 2 cut(s) 1054, 1313
BcuI ACTAGT 1 cut(s) 632
BfaI CTAG 9 cut(s) 261, 284, 300, 311, 327, 348, 459, 633, 978
BfoI RGCGCY 5 cut(s) 261, 290, 326, 347, 368
BfrI CTTAAG 1 cut(s) 880
BfuAI ACCTGC 1 cut(s) 392
BfuI GTATCC 2 cut(s) 620, 643
BglI GCCNNNNNGGC 1 cut(s) 320
BglII AGATCT 1 cut(s) 1395
BlnI CCTAGG 3 cut(s) 299, 326, 347
Bme1390I CCNGG 8 cut(s) 73, 291, 316, 476, 773, 946, 1271, 1648
Bme18I GGWCC 6 cut(s) 129, 471, 526, 1183, 1267, 1825
BmeT110I CYCGRG 1 cut(s) 84
BmgT120I GGNCC 8 cut(s) 129, 471, 526, 564, 967, 1183, 1267, 1825
BmrFI CCNGG 8 cut(s) 73, 291, 316, 476, 773, 946, 1271, 1648
BmsI GCATC 5 cut(s) 1138, 1221, 1269, 1336, 1802
BplI GAGNNNNNCTC 2 cut(s) 67, 99
BpmI CTGGAG 1 cut(s) 522
Bpu10I CCTNAGC 1 cut(s) 1155
BpuMI CCSGG 4 cut(s) 476, 773, 946, 1271
BsaAI YACGTR 1 cut(s) 1365
BsaHI GRCGYC 4 cut(s) 323, 344, 365, 782
BsaWI WCCGGW 1 cut(s) 902
BsaXI ACNNNNNCTCC 6 cut(s) 32, 62, 767, 797, 1167, 1197
Bsc4I CCNNNNNNNGG 3 cut(s) 305, 384, 584
Bse118I RCCGGY 1 cut(s) 1780
Bse1I ACTGG 2 cut(s) 1513, 1619
Bse3DI GCAATG 1 cut(s) 1467
BseBI CCWGG 4 cut(s) 73, 291, 316, 1648
BseGI GGATG 5 cut(s) 676, 730, 835, 928, 1351
BseLI CCNNNNNNNGG 3 cut(s) 305, 384, 584
BseMI GCAATG 1 cut(s) 1467
BseMII CTCAG 2 cut(s) 1105, 1169
BseNI ACTGG 2 cut(s) 1513, 1619
BseRI GAGGAG 3 cut(s) 479, 976, 1355
BseSI GKGCMC 2 cut(s) 773, 1435
BseXI GCAGC 2 cut(s) 992, 1568
BsgI GTGCAG 1 cut(s) 1181
Bsh1236I CGCG 2 cut(s) 28, 787
BshFI GGCC 4 cut(s) 565, 944, 969, 1486
BshNI GGYRCC 7 cut(s) 104, 322, 343, 364, 768, 1306, 1432
BsiHKAI GWGCWC 2 cut(s) 1180, 1757
BsiHKCI CYCGRG 1 cut(s) 84
BsiSI CCGG 6 cut(s) 476, 773, 903, 945, 1270, 1781
BslFI GGGAC 8 cut(s) 321, 441, 512, 823, 1280, 1537, 1559, 1838
BslI CCNNNNNNNGG 3 cut(s) 305, 384, 584
BsmAI GTCTC 2 cut(s) 1054, 1313
BsmBI CGTCTC 1 cut(s) 1313
BsmFI GGGAC 8 cut(s) 321, 441, 512, 823, 1280, 1537, 1559, 1838
BsnI GGCC 4 cut(s) 565, 944, 969, 1486
BsoBI CYCGRG 1 cut(s) 84
Bsp1286I GDGCHC 6 cut(s) 98, 738, 773, 1180, 1435, 1757
Bsp143I GATC 7 cut(s) 240, 462, 587, 956, 1383, 1395, 1606
BspANI GGCC 4 cut(s) 565, 944, 969, 1486
BspCNI CTCAG 2 cut(s) 1104, 1168
BspFNI CGCG 2 cut(s) 28, 787
BspMI ACCTGC 1 cut(s) 392
BspPI GGATC 3 cut(s) 248, 470, 595
BspT107I GGYRCC 7 cut(s) 104, 322, 343, 364, 768, 1306, 1432
BspTI CTTAAG 1 cut(s) 880
BsrBI CCGCTC 3 cut(s) 12, 80, 1154
BsrDI GCAATG 1 cut(s) 1467
BsrFI RCCGGY 1 cut(s) 1780
BsrI ACTGG 2 cut(s) 1513, 1619
BssAI RCCGGY 1 cut(s) 1780
BssMI GATC 7 cut(s) 240, 462, 587, 956, 1383, 1395, 1606
BssNAI GTATAC 1 cut(s) 835
BssNI GRCGYC 4 cut(s) 323, 344, 365, 782
BssT1I CCWWGG 5 cut(s) 299, 326, 347, 378, 560
Bst1107I GTATAC 1 cut(s) 835
Bst2UI CCWGG 4 cut(s) 73, 291, 316, 1648
Bst4CI ACNGT 7 cut(s) 104, 226, 432, 864, 1082, 1456, 1557
Bst6I CTCTTC 2 cut(s) 209, 947
BstACI GRCGYC 4 cut(s) 323, 344, 365, 782
BstAFI CTTAAG 1 cut(s) 880
BstBAI YACGTR 1 cut(s) 1365
BstC8I GCNNGC 4 cut(s) 94, 267, 1684, 1737
BstDEI CTNAG 4 cut(s) 420, 1091, 1155, 1392
BstDSI CCRYGG 2 cut(s) 26, 1171
BstF5I GGATG 5 cut(s) 676, 730, 835, 928, 1351
BstFNI CGCG 2 cut(s) 28, 787
BstH2I RGCGCY 5 cut(s) 261, 290, 326, 347, 368
BstHHI GCGC 6 cut(s) 260, 289, 325, 346, 367, 789
BstKTI GATC 7 cut(s) 243, 465, 590, 959, 1386, 1398, 1609
BstMAI GTCTC 2 cut(s) 1054, 1313
BstMBI GATC 7 cut(s) 240, 462, 587, 956, 1383, 1395, 1606
BstMWI GCNNNNNNNGC 7 cut(s) 77, 89, 266, 295, 320, 1679, 1790
BstNI CCWGG 4 cut(s) 73, 291, 316, 1648
BstNSI RCATGY 2 cut(s) 1353, 1686
BstSCI CCNGG 8 cut(s) 71, 289, 314, 474, 771, 944, 1269, 1646
BstSLI GKGCMC 2 cut(s) 773, 1435
BstUI CGCG 2 cut(s) 28, 787
BstV1I GCAGC 2 cut(s) 992, 1568
BstX2I RGATCY 2 cut(s) 462, 1395
BstYI RGATCY 2 cut(s) 462, 1395
BstZ17I GTATAC 1 cut(s) 835
BsuI GTATCC 2 cut(s) 620, 643
BsuRI GGCC 4 cut(s) 565, 944, 969, 1486
BtgI CCRYGG 2 cut(s) 26, 1171
BtsCI GGATG 5 cut(s) 676, 730, 835, 928, 1351
BtsI GCAGTG 1 cut(s) 1169
BtsIMutI CAGTG 1 cut(s) 1169
BveI ACCTGC 1 cut(s) 392
Cac8I GCNNGC 4 cut(s) 94, 267, 1684, 1737
CfoI GCGC 6 cut(s) 260, 289, 325, 346, 367, 789
Cfr10I RCCGGY 1 cut(s) 1780
Cfr13I GGNCC 8 cut(s) 129, 471, 526, 564, 967, 1183, 1267, 1825
Cfr42I CCGCGG 1 cut(s) 29
CseI GACGC 3 cut(s) 1330, 1662, 1799
CsiI ACCWGGT 1 cut(s) 1646
Csp6I GTAC 7 cut(s) 499, 683, 877, 991, 1051, 1210, 1274
CviAII CATG 6 cut(s) 22, 661, 757, 1055, 1350, 1683
CviQI GTAC 7 cut(s) 499, 683, 877, 991, 1051, 1210, 1274
DdeI CTNAG 4 cut(s) 420, 1091, 1155, 1392
DinI GGCGCC 3 cut(s) 324, 345, 366
DpnI GATC 7 cut(s) 242, 464, 589, 958, 1385, 1397, 1608
DpnII GATC 7 cut(s) 240, 462, 587, 956, 1383, 1395, 1606
Eam1104I CTCTTC 2 cut(s) 209, 947
EarI CTCTTC 2 cut(s) 209, 947
EciI GGCGGA 3 cut(s) 58, 482, 505
Ecl136II GAGCTC 1 cut(s) 1755
Eco130I CCWWGG 5 cut(s) 299, 326, 347, 378, 560
Eco147I AGGCCT 1 cut(s) 1486
Eco24I GRGCYC 3 cut(s) 98, 738, 1757
Eco32I GATATC 3 cut(s) 390, 1221, 1539
Eco47I GGWCC 6 cut(s) 129, 471, 526, 1183, 1267, 1825
Eco53kI GAGCTC 1 cut(s) 1755
Eco57I CTGAAG 1 cut(s) 1273
Eco88I CYCGRG 1 cut(s) 84
EcoICRI GAGCTC 1 cut(s) 1755
EcoO109I RGGNCCY 2 cut(s) 967, 1825
EcoRII CCWGG 4 cut(s) 71, 289, 314, 1646
EcoRV GATATC 3 cut(s) 390, 1221, 1539
EcoT14I CCWWGG 5 cut(s) 299, 326, 347, 378, 560
EcoT22I ATGCAT 1 cut(s) 1351
EcoT38I GRGCYC 3 cut(s) 98, 738, 1757
EgeI GGCGCC 3 cut(s) 324, 345, 366
EheI GGCGCC 3 cut(s) 324, 345, 366
ErhI CCWWGG 5 cut(s) 299, 326, 347, 378, 560
Esp3I CGTCTC 1 cut(s) 1313
FaeI CATG 6 cut(s) 25, 664, 760, 1058, 1353, 1686
FalI AAGNNNNNCTT 6 cut(s) 544, 576, 1183, 1215, 1596, 1628
FaqI GGGAC 8 cut(s) 321, 441, 512, 823, 1280, 1537, 1559, 1838
FatI CATG 6 cut(s) 21, 660, 756, 1054, 1349, 1682
FauI CCCGC 4 cut(s) 258, 297, 407, 1836
FbaI TGATCA 1 cut(s) 1383
FblI GTMKAC 3 cut(s) 629, 834, 1788
FokI GGATG 5 cut(s) 683, 737, 842, 935, 1358
FriOI GRGCYC 3 cut(s) 98, 738, 1757
FspBI CTAG 9 cut(s) 261, 284, 300, 311, 327, 348, 459, 633, 978
GlaI GCGC 6 cut(s) 259, 288, 324, 345, 366, 788
GsuI CTGGAG 1 cut(s) 522
HaeII RGCGCY 5 cut(s) 261, 290, 326, 347, 368
HaeIII GGCC 4 cut(s) 565, 944, 969, 1486
HapII CCGG 6 cut(s) 476, 773, 903, 945, 1270, 1781
HgaI GACGC 3 cut(s) 1330, 1662, 1799
HhaI GCGC 6 cut(s) 260, 289, 325, 346, 367, 789
Hin1I GRCGYC 4 cut(s) 323, 344, 365, 782
Hin1II CATG 6 cut(s) 25, 664, 760, 1058, 1353, 1686
Hin6I GCGC 6 cut(s) 258, 287, 323, 344, 365, 787
HinP1I GCGC 6 cut(s) 258, 287, 323, 344, 365, 787
HincII GTYRAC 2 cut(s) 229, 1624
HindII GTYRAC 2 cut(s) 229, 1624
HinfI GANTC 5 cut(s) 824, 885, 1562, 1713, 1774
HpaII CCGG 6 cut(s) 476, 773, 903, 945, 1270, 1781
HphI GGTGA 4 cut(s) 188, 790, 1481, 1783
Hpy188III TCNNGA 6 cut(s) 539, 591, 920, 1085, 1204, 1405
Hpy99I CGWCG 5 cut(s) 116, 226, 787, 1497, 1678
HpyAV CCTTC 7 cut(s) 517, 578, 588, 668, 907, 934, 1703
HpyCH4III ACNGT 7 cut(s) 104, 226, 432, 864, 1082, 1456, 1557
HpyCH4IV ACGT 3 cut(s) 782, 1364, 1815
HpyCH4V TGCA 5 cut(s) 159, 1035, 1162, 1349, 1739
HpyF10VI GCNNNNNNNGC 7 cut(s) 77, 89, 266, 295, 320, 1679, 1790
HpyF3I CTNAG 4 cut(s) 420, 1091, 1155, 1392
HpySE526I ACGT 3 cut(s) 782, 1364, 1815
Hsp92I GRCGYC 4 cut(s) 323, 344, 365, 782
Hsp92II CATG 6 cut(s) 25, 664, 760, 1058, 1353, 1686
HspAI GCGC 6 cut(s) 258, 287, 323, 344, 365, 787
KasI GGCGCC 3 cut(s) 322, 343, 364
KflI GGGWCCC 1 cut(s) 1825
Ksp22I TGATCA 1 cut(s) 1383
KspI CCGCGG 1 cut(s) 29
Kzo9I GATC 7 cut(s) 240, 462, 587, 956, 1383, 1395, 1606
LmnI GCTCC 2 cut(s) 1173, 1175
Lsp1109I GCAGC 2 cut(s) 992, 1568
LweI GCATC 5 cut(s) 1138, 1221, 1269, 1336, 1802
MabI ACCWGGT 1 cut(s) 1646
MaeI CTAG 9 cut(s) 261, 284, 300, 311, 327, 348, 459, 633, 978
MaeII ACGT 3 cut(s) 782, 1364, 1815
MaeIII GTNAC 4 cut(s) 715, 778, 1082, 1642
MalI GATC 7 cut(s) 242, 464, 589, 958, 1385, 1397, 1608
MbiI CCGCTC 3 cut(s) 12, 80, 1154
MboI GATC 7 cut(s) 240, 462, 587, 956, 1383, 1395, 1606
MboII GAAGA 5 cut(s) 226, 964, 1366, 1582, 1718
MfeI CAATTG 2 cut(s) 170, 843
MflI RGATCY 2 cut(s) 462, 1395
MhlI GDGCHC 6 cut(s) 98, 738, 773, 1180, 1435, 1757
MluCI AATT 2 cut(s) 170, 843
Mly113I GGCGCC 3 cut(s) 323, 344, 365
MlyI GAGTC 1 cut(s) 1571
MmeI TCCRAC 2 cut(s) 94, 637
Mph1103I ATGCAT 1 cut(s) 1351
MseI TTAA 1 cut(s) 881
MslI CAYNNNNRTG 2 cut(s) 998, 1457
MspA1I CMGCKG 1 cut(s) 28
MspCI CTTAAG 1 cut(s) 880
MspI CCGG 6 cut(s) 476, 773, 903, 945, 1270, 1781
MspR9I CCNGG 8 cut(s) 73, 291, 316, 476, 773, 946, 1271, 1648
MunI CAATTG 2 cut(s) 170, 843
MvaI CCWGG 4 cut(s) 73, 291, 316, 1648
MvnI CGCG 2 cut(s) 28, 787
MwoI GCNNNNNNNGC 7 cut(s) 77, 89, 266, 295, 320, 1679, 1790
NarI GGCGCC 3 cut(s) 323, 344, 365
NciI CCSGG 4 cut(s) 476, 773, 946, 1271
NdeII GATC 7 cut(s) 240, 462, 587, 956, 1383, 1395, 1606
NlaIII CATG 6 cut(s) 25, 664, 760, 1058, 1353, 1686
NmeAIII GCCGAG 1 cut(s) 1283
NmuCI GTSAC 3 cut(s) 778, 1082, 1642
NsiI ATGCAT 1 cut(s) 1351
NspI RCATGY 2 cut(s) 1353, 1686
OliI CACNNNNGTG 2 cut(s) 998, 1457
PaeI GCATGC 1 cut(s) 1686
PaeR7I CTCGAG 1 cut(s) 84
PceI AGGCCT 1 cut(s) 1486
PcsI WCGNNNNNNNCGW 3 cut(s) 108, 735, 788
PfeI GAWTC 4 cut(s) 824, 885, 1713, 1774
PleI GAGTC 1 cut(s) 1570
PluTI GGCGCC 3 cut(s) 326, 347, 368
PpsI GAGTC 1 cut(s) 1570
Ppu21I YACGTR 1 cut(s) 1365
PpuMI RGGWCCY 1 cut(s) 1825
Psp124BI GAGCTC 1 cut(s) 1757
Psp1406I AACGTT 1 cut(s) 1815
Psp5II RGGWCCY 1 cut(s) 1825
Psp6I CCWGG 4 cut(s) 71, 289, 314, 1646
PspGI CCWGG 4 cut(s) 71, 289, 314, 1646
PspPI GGNCC 8 cut(s) 129, 471, 526, 564, 967, 1183, 1267, 1825
PspPPI RGGWCCY 1 cut(s) 1825
PspXI VCTCGAGB 1 cut(s) 84
PsuI RGATCY 2 cut(s) 462, 1395
RsaI GTAC 7 cut(s) 500, 684, 878, 992, 1052, 1211, 1275
RsaNI GTAC 7 cut(s) 499, 683, 877, 991, 1051, 1210, 1274
RseI CAYNNNNRTG 2 cut(s) 998, 1457
SacI GAGCTC 1 cut(s) 1757
SacII CCGCGG 1 cut(s) 29
SaqAI TTAA 1 cut(s) 881
Sau3AI GATC 7 cut(s) 240, 462, 587, 956, 1383, 1395, 1606
Sau96I GGNCC 8 cut(s) 129, 471, 526, 564, 967, 1183, 1267, 1825
SchI GAGTC 1 cut(s) 1571
ScrFI CCNGG 8 cut(s) 73, 291, 316, 476, 773, 946, 1271, 1648
SduI GDGCHC 6 cut(s) 98, 738, 773, 1180, 1435, 1757
SexAI ACCWGGT 1 cut(s) 1646
SfaNI GCATC 5 cut(s) 1138, 1221, 1269, 1336, 1802
SfoI GGCGCC 3 cut(s) 324, 345, 366
Sfr274I CTCGAG 1 cut(s) 84
Sfr303I CCGCGG 1 cut(s) 29
SgrAI CRCCGGYG 1 cut(s) 1780
SgrBI CCGCGG 1 cut(s) 29
SinI GGWCC 6 cut(s) 129, 471, 526, 1183, 1267, 1825
SlaI CTCGAG 1 cut(s) 84
SmiMI CAYNNNNRTG 2 cut(s) 998, 1457
SmlI CTYRAG 2 cut(s) 84, 880
SmoI CTYRAG 2 cut(s) 84, 880
SpeI ACTAGT 1 cut(s) 632
SphI GCATGC 1 cut(s) 1686
Sse9I AATT 2 cut(s) 170, 843
SseBI AGGCCT 1 cut(s) 1486
SspDI GGCGCC 3 cut(s) 322, 343, 364
SspMI CTAG 9 cut(s) 261, 284, 300, 311, 327, 348, 459, 633, 978
SstI GAGCTC 1 cut(s) 1757
StuI AGGCCT 1 cut(s) 1486
StyD4I CCNGG 8 cut(s) 71, 289, 314, 474, 771, 944, 1269, 1646
StyI CCWWGG 5 cut(s) 299, 326, 347, 378, 560
TaaI ACNGT 7 cut(s) 104, 226, 432, 864, 1082, 1456, 1557
TaiI ACGT 3 cut(s) 785, 1367, 1818
TaqI TCGA 9 cut(s) 85, 203, 752, 933, 959, 1203, 1404, 1676, 1761
TasI AATT 2 cut(s) 170, 843
TatI WGTACW 3 cut(s) 682, 876, 1209
TfiI GAWTC 4 cut(s) 824, 885, 1713, 1774
Tru1I TTAA 1 cut(s) 881
Tru9I TTAA 1 cut(s) 881
TscAI CASTG 1 cut(s) 1169
TseFI GTSAC 3 cut(s) 778, 1082, 1642
TseI GCWGC 2 cut(s) 1005, 1581
Tsp45I GTSAC 3 cut(s) 778, 1082, 1642
TspDTI ATGAA 5 cut(s) 17, 597, 687, 1366, 1616
TspGWI ACGGA 2 cut(s) 683, 1160
TspRI CASTG 1 cut(s) 1169
Vha464I CTTAAG 1 cut(s) 880
VpaK11BI GGWCC 6 cut(s) 129, 471, 526, 1183, 1267, 1825
XceI RCATGY 2 cut(s) 1353, 1686
XhoI CTCGAG 1 cut(s) 84
XmaJI CCTAGG 3 cut(s) 299, 326, 347
XmiI GTMKAC 3 cut(s) 629, 834, 1788
XspI CTAG 9 cut(s) 261, 284, 300, 311, 327, 348, 459, 633, 978
ZraI GACGTC 1 cut(s) 783
Zsp2I ATGCAT 1 cut(s) 1351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.