Protein FAR1-RELATED SEQUENCE
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 42 - 164 | 9.5e-25 | Reverse transcriptase-like |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 56 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 227 |
| AccI | GTMKAC | 2 cut(s) | 232, 520 |
| AciI | CCGC | 1 cut(s) | 451 |
| AcsI | RAATTY | 1 cut(s) | 26 |
| AfaI | GTAC | 1 cut(s) | 219 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 227 |
| AgsI | TTSAA | 3 cut(s) | 304, 497, 557 |
| AluBI | AGCT | 6 cut(s) | 8, 34, 209, 401, 421, 491 |
| AluI | AGCT | 6 cut(s) | 8, 34, 209, 401, 421, 491 |
| AoxI | GGCC | 1 cut(s) | 530 |
| ApeKI | GCWGC | 6 cut(s) | 5, 94, 134, 156, 248, 418 |
| ApoI | RAATTY | 1 cut(s) | 26 |
| AseI | ATTAAT | 1 cut(s) | 342 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 492 |
| AspLEI | GCGC | 1 cut(s) | 472 |
| AspS9I | GGNCC | 1 cut(s) | 530 |
| AsuHPI | GGTGA | 1 cut(s) | 515 |
| BanI | GGYRCC | 1 cut(s) | 56 |
| BbsI | GAAGAC | 1 cut(s) | 26 |
| BbvI | GCAGC | 6 cut(s) | 17, 106, 121, 143, 260, 430 |
| BccI | CCATC | 1 cut(s) | 47 |
| BfaI | CTAG | 3 cut(s) | 9, 392, 577 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 538 |
| BisI | GCNGC | 6 cut(s) | 6, 95, 135, 157, 249, 419 |
| BlsI | GCNGC | 6 cut(s) | 7, 96, 136, 158, 250, 420 |
| BmgT120I | GGNCC | 1 cut(s) | 530 |
| BmiI | GGNNCC | 1 cut(s) | 58 |
| BmrI | ACTGGG | 1 cut(s) | 176 |
| BmsI | GCATC | 1 cut(s) | 121 |
| BmuI | ACTGGG | 1 cut(s) | 176 |
| BpiI | GAAGAC | 1 cut(s) | 26 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 315, 347 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 227 |
| Bse1I | ACTGG | 1 cut(s) | 171 |
| BseGI | GGATG | 1 cut(s) | 568 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 227 |
| BseMII | CTCAG | 1 cut(s) | 77 |
| BseNI | ACTGG | 1 cut(s) | 171 |
| BseRI | GAGGAG | 1 cut(s) | 219 |
| BseXI | GCAGC | 6 cut(s) | 17, 106, 121, 143, 260, 430 |
| BshFI | GGCC | 1 cut(s) | 532 |
| BshNI | GGYRCC | 1 cut(s) | 56 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 227 |
| BsnI | GGCC | 1 cut(s) | 532 |
| BspACI | CCGC | 1 cut(s) | 451 |
| BspANI | GGCC | 1 cut(s) | 532 |
| BspCNI | CTCAG | 1 cut(s) | 76 |
| BspHI | TCATGA | 1 cut(s) | 352 |
| BspLI | GGNNCC | 1 cut(s) | 58 |
| BspQI | GCTCTTC | 1 cut(s) | 498 |
| BspT107I | GGYRCC | 1 cut(s) | 56 |
| BsrI | ACTGG | 1 cut(s) | 171 |
| Bst4CI | ACNGT | 1 cut(s) | 359 |
| Bst6I | CTCTTC | 2 cut(s) | 354, 498 |
| BstC8I | GCNNGC | 1 cut(s) | 36 |
| BstDEI | CTNAG | 2 cut(s) | 63, 200 |
| BstF5I | GGATG | 1 cut(s) | 568 |
| BstHHI | GCGC | 1 cut(s) | 472 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 254, 488, 538 |
| BstV1I | GCAGC | 6 cut(s) | 17, 106, 121, 143, 260, 430 |
| BstV2I | GAAGAC | 1 cut(s) | 26 |
| BsuRI | GGCC | 1 cut(s) | 532 |
| BtsCI | GGATG | 1 cut(s) | 568 |
| BtsIMutI | CAGTG | 1 cut(s) | 80 |
| Cac8I | GCNNGC | 1 cut(s) | 36 |
| CciI | TCATGA | 1 cut(s) | 352 |
| CfoI | GCGC | 1 cut(s) | 472 |
| Cfr13I | GGNCC | 1 cut(s) | 530 |
| Csp6I | GTAC | 1 cut(s) | 218 |
| CviAII | CATG | 4 cut(s) | 293, 353, 443, 537 |
| CviQI | GTAC | 1 cut(s) | 218 |
| DdeI | CTNAG | 2 cut(s) | 63, 200 |
| Eam1104I | CTCTTC | 2 cut(s) | 354, 498 |
| EarI | CTCTTC | 2 cut(s) | 354, 498 |
| FaeI | CATG | 4 cut(s) | 296, 356, 446, 540 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 193, 225 |
| FatI | CATG | 4 cut(s) | 292, 352, 442, 536 |
| FauI | CCCGC | 1 cut(s) | 444 |
| FblI | GTMKAC | 2 cut(s) | 232, 520 |
| Fnu4HI | GCNGC | 6 cut(s) | 6, 95, 135, 157, 249, 419 |
| FokI | GGATG | 1 cut(s) | 575 |
| Fsp4HI | GCNGC | 6 cut(s) | 6, 95, 135, 157, 249, 419 |
| FspBI | CTAG | 3 cut(s) | 9, 392, 577 |
| GlaI | GCGC | 1 cut(s) | 471 |
| GluI | GCNGC | 6 cut(s) | 6, 95, 135, 157, 249, 419 |
| HaeIII | GGCC | 1 cut(s) | 532 |
| HhaI | GCGC | 1 cut(s) | 472 |
| Hin1II | CATG | 4 cut(s) | 296, 356, 446, 540 |
| Hin6I | GCGC | 1 cut(s) | 470 |
| HinP1I | GCGC | 1 cut(s) | 470 |
| HinfI | GANTC | 1 cut(s) | 300 |
| HphI | GGTGA | 1 cut(s) | 515 |
| Hpy166II | GTNNAC | 3 cut(s) | 233, 506, 521 |
| Hpy188I | TCNGA | 3 cut(s) | 194, 299, 364 |
| Hpy188III | TCNNGA | 2 cut(s) | 182, 353 |
| Hpy8I | GTNNAC | 3 cut(s) | 233, 506, 521 |
| HpyAV | CCTTC | 2 cut(s) | 374, 543 |
| HpyCH4III | ACNGT | 1 cut(s) | 359 |
| HpyCH4V | TGCA | 5 cut(s) | 38, 78, 271, 459, 482 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 254, 488, 538 |
| HpyF3I | CTNAG | 2 cut(s) | 63, 200 |
| Hsp92II | CATG | 4 cut(s) | 296, 356, 446, 540 |
| HspAI | GCGC | 1 cut(s) | 470 |
| LguI | GCTCTTC | 1 cut(s) | 498 |
| LmnI | GCTCC | 1 cut(s) | 206 |
| LpnPI | CCDG | 3 cut(s) | 54, 152, 513 |
| Lsp1109I | GCAGC | 6 cut(s) | 17, 106, 121, 143, 260, 430 |
| LweI | GCATC | 1 cut(s) | 121 |
| MaeI | CTAG | 3 cut(s) | 9, 392, 577 |
| MboII | GAAGA | 3 cut(s) | 31, 341, 485 |
| MluCI | AATT | 4 cut(s) | 26, 124, 315, 547 |
| MmeI | TCCRAC | 2 cut(s) | 172, 277 |
| MroXI | GAANNNNTTC | 1 cut(s) | 492 |
| MseI | TTAA | 4 cut(s) | 117, 278, 311, 342 |
| MslI | CAYNNNNRTG | 1 cut(s) | 549 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 254, 488, 538 |
| NlaIII | CATG | 4 cut(s) | 296, 356, 446, 540 |
| NlaIV | GGNNCC | 1 cut(s) | 58 |
| PagI | TCATGA | 1 cut(s) | 352 |
| PciSI | GCTCTTC | 1 cut(s) | 498 |
| PdmI | GAANNNNTTC | 1 cut(s) | 492 |
| PfeI | GAWTC | 1 cut(s) | 300 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 227 |
| PkrI | GCNGC | 6 cut(s) | 7, 96, 136, 158, 250, 420 |
| PshBI | ATTAAT | 1 cut(s) | 342 |
| PspN4I | GGNNCC | 1 cut(s) | 58 |
| PspPI | GGNCC | 1 cut(s) | 530 |
| RsaI | GTAC | 1 cut(s) | 219 |
| RsaNI | GTAC | 1 cut(s) | 218 |
| RseI | CAYNNNNRTG | 1 cut(s) | 549 |
| SapI | GCTCTTC | 1 cut(s) | 498 |
| SaqAI | TTAA | 4 cut(s) | 117, 278, 311, 342 |
| SatI | GCNGC | 6 cut(s) | 6, 95, 135, 157, 249, 419 |
| Sau96I | GGNCC | 1 cut(s) | 530 |
| SfaNI | GCATC | 1 cut(s) | 121 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 549 |
| Sse9I | AATT | 4 cut(s) | 26, 124, 315, 547 |
| SsiI | CCGC | 1 cut(s) | 451 |
| SspMI | CTAG | 3 cut(s) | 9, 392, 577 |
| TaaI | ACNGT | 1 cut(s) | 359 |
| TaqI | TCGA | 1 cut(s) | 181 |
| TasI | AATT | 4 cut(s) | 26, 124, 315, 547 |
| TfiI | GAWTC | 1 cut(s) | 300 |
| Tru1I | TTAA | 4 cut(s) | 117, 278, 311, 342 |
| Tru9I | TTAA | 4 cut(s) | 117, 278, 311, 342 |
| TscAI | CASTG | 1 cut(s) | 80 |
| TseI | GCWGC | 6 cut(s) | 5, 94, 134, 156, 248, 418 |
| TspDTI | ATGAA | 6 cut(s) | 103, 159, 281, 341, 525, 533 |
| TspRI | CASTG | 1 cut(s) | 80 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 227 |
| VspI | ATTAAT | 1 cut(s) | 342 |
| XapI | RAATTY | 1 cut(s) | 26 |
| XmiI | GTMKAC | 2 cut(s) | 232, 520 |
| XmnI | GAANNNNTTC | 1 cut(s) | 492 |
| XspI | CTAG | 3 cut(s) | 9, 392, 577 |