FvH4_7g03431

Protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000074
Physical Location & Seq
Reverse (-)
3748473 .. 3753875
5403 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g03431.t1

Sequence Viewer

Length: 2787 bp
ATGGAGGAGTGCGGCATGCGATTCAGTGAACCGAATTATCATGATGGGGCTGTAGATGAGGATGATTTGTCAAACGAGTATGAAGAGGTGTGTTTGGATGAGGAAGCTTCACAGACTGCAAATATGGTTGAGAGTCTGGATTGTCTACACTTCAACGGCAAGAAGTATGAAGACCTTAAATCCTCTGATATGATAGGTGTGGAGTTTAAGGATTACGAGTCAGTCGACAAGTTCTATGCTTACTATTCACTTGCAATGGGGTTCAGTTTCAGAAGAGAAAAGTTGGATCGGAATTCGGTAGGATTGGTTGCCAGGAGACAGTTGGTGTGTTCAAAGGAGGGTTTGAGAAAGAAAAAGAATTCCAATCCTGCTCCTAGTTTTGTGTCAGAGGTCATTTCAAGCGCCCAAAATTATAGCTCACCACATGGGAGTAAATTGGTCTGCATGAAGAAAAAAGTTAGCCAGAGACCAGTCGTTGAAGATGCTGATAAAAGAAGTATGAAACGTCCTCAGACACAGTTTGGTGATGGTGGACATGAAAAGAGAAGGCAGCAGTATCCAGAGAGAGTTCATACCAGAGGCAATTGTCGAGCTCGTATCACAGCAAAGAGATGCAGGGAAACTGGTGTCTTCCATGTGGTCGAATTTATTACCGAACATAATCACGACCTTGCTAAAGCAGACTTTGTTCCCTTCCTTCAATCTCACCGCAAGGTTCGGGACCATGATGTTGCTCCTCGGGTTGCATTTAGGAAAGTCTCTGTTGGTACGCGCGGGGGTTATGAATGTTTGGTCCACCAAGCAGGGGGGCATGAATTTTTTGGTTTTACTATGAAAGATTTGTACGACAAGATGGACTCTGAAAAGAGAGAGCTCAAGATTGATGGTGAGGCCCATTCTGCAATTAGTTTCATGAATTTAAAGGCATGTAAAGAGGCCGAATTTTATTGTTTGTTGAGTGTTGATGTAGAAAGCCGGCTGGGTAATATGTTCTGGAGAGATACCAAGTCTCTGGCAGATTACAATAATTTTGGGGAGGTTTTGATTGTTGATAGTACTTACAAGACAAATATCAATGGCAAGCCATTAGCCGTCTTTGTTGGTGTAAATAATCACAGGGCAACCGTACTCTTTGGGTGTGCATTGTTGGTTGATGAGAGTGAAGATACCTACAAATGGGTGCTTACGGCCTTTTTAACTTCCATGAGGGGGAAAAAACCTATATCAGTCATCACTGATGGGGATGAGGCATTGAGAAATGCAGCTGTGAACATCATTCCAGAGGCTCGACACCGATTGTGTGCTTGGCACATTGCAGAGGATGTTGTCAAAAATGTTAGGGATGTGGATGTCCAAAGAGATTTTTGCCACCTAATTTTTGCCGGACTCGGTGTGGAAGAGTGGGAATCTGCCTGGCATAAAATGGTGGCAATGCATGGGCTTCAAAACAACAAATGGGTTGCTGCAATGTACAACAAGAGGGAGAGGTGGGCAGAAGCTTTTTTCAGGAACCATTTCTTTGGGGGTATGTGCACAACTCAAAGATGCAAGGGAATGCACAGAAATTTGAAAGGTGGTGTTGGCCGTTACATGGAGTTGTGTGAAGTGTTGCCACGCATGGACAAGACAATTGAACGCATTAGGTTCAATGGTCTGAATGATGACTTCAAATCCATGAACTCGCACCCAATTATTGGTAGCCACATGCGGTGTATCCAAGTGCAGGTTGGTGCAAAGTTTACCCATGACATATTTCTCCTCATAAAAGATCAAATACTTTTTGAGTCAAAGTTTATTGTTGCTGACCGCCTTTGTGATGAGAATCGAGGATCAACACTTTTTATTGTAACACAATATGGTAAAGCTGAAAGGACATGGCAAGTAACACATTACCAAGCCCACCCCGACATTTCTTTCGTATGCTCATGTCACCTATTTGAGTCGGATGGTATTCCTTGCTGTCACATCTTCACAGCCATGAAGACAATGAATATGACTAGCCTTCCAGAATCTTTGGTCAAGCAGAGGTGGACAAAACAGGCATGTACTATAAACACCAGCGGTCTCATGAGTGGAATGATGCCTGCCAGGGATTTGCAGCTTGCTCGTTTTGGGCAAATGATGGGTGACTGTGCACAGATTTGTCATTCAGCTTCACTCTCAGATGAGGCATATGAAGAAATCAATAACAGTCTTAGTCGACTAATGGTTAGGTCTAACGCATTCAAGAGGTGCAAAAATAGTAACCCACCAGAAACTGTTGATGGTCTACACCCTAATGTGATTGGGGATCTGAATGTCTGCAAAACCAAGGGCACGCGTTCCAAGCATTCGACCAGTACTGAGGTCGAGGGAGAGCAGCCAGTAGGGAAGGGTTGTGGATTTTGCAGCCGGCCAGGTCACAATACACGCACTTGTCCACTTGCTGCTCAAAACAGGGAGAATACGGAAAATCCTCCTCTCGAAAGAGCACATAATAGCTTAATTGATGCTATTGCAACCTCAGGCAGACCACGTAGCTTGCAATCGACTCCGGGTTTTAACATACACAAGGGTCAAGGTGGTTTCGCCTCCAGTAGGCAGACTGATGAAGATGATGTTTTCCTCGGTCAAACTAGCAGCCAGCATATGTTTCATCACATTGAAGAATCCAGGACGTTGGAGTTTTTTACTGGTCATCACACCTTTTTGGGTTCCCTGAATGCTGCTCCATCTGTAAATCAAAATGTCATTATGTCTTCTAGTAATACGCATCATGGAGGGGACACAGTTCGGCTGTCTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

929

Amino Acids

104.93

Weight (kDa)

7.56

Isoelectric Point (pI)

44.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 77 - 122 1.5e-06 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 320 - 412 2.5e-07 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 347 - 439 4.1e-25 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1714
AccB7I CCANNNNNTGG 1 cut(s) 1694
AccI GTMKAC 4 cut(s) 145, 225, 2200, 2269
AccII CGCG 3 cut(s) 772, 774, 2320
AciI CCGC 6 cut(s) 12, 709, 774, 1708, 1807, 2061
AclWI GGATC 3 cut(s) 294, 1837, 2298
AcoI YGGCCR 2 cut(s) 1582, 2393
AcsI RAATTY 7 cut(s) 292, 358, 644, 815, 916, 941, 1564
AfaI GTAC 7 cut(s) 769, 845, 1057, 1128, 1472, 2047, 2341
AfiI CCNNNNNNNGG 7 cut(s) 805, 1176, 1209, 1591, 1694, 1723, 2577
AflIII ACRYGT 1 cut(s) 2318
AjnI CCWGG 5 cut(s) 311, 1412, 2087, 2395, 2651
Alw21I GWGCWC 5 cut(s) 595, 876, 1535, 2137, 2473
Alw26I GTCTC 5 cut(s) 310, 460, 763, 1014, 2069
Alw44I GTGCAC 2 cut(s) 1531, 2133
AlwI GGATC 3 cut(s) 294, 1837, 2298
AlwNI CAGNNNCTG 1 cut(s) 2258
Ama87I CYCGRG 1 cut(s) 738
AoxI GGCC 5 cut(s) 891, 936, 1188, 1582, 2393
ApaLI GTGCAC 2 cut(s) 1531, 2133
ApeKI GCWGC 9 cut(s) 550, 1262, 1463, 2098, 2359, 2388, 2426, 2619, 2705
ApoI RAATTY 7 cut(s) 292, 358, 644, 815, 916, 941, 1564
ArsI GACNNNNNNTTYG 2 cut(s) 1898, 1930
Asp700I GAANNNNTTC 1 cut(s) 1514
AspLEI GCGC 2 cut(s) 404, 774
AspS9I GGNCC 3 cut(s) 721, 793, 892
AsuC2I CCSGG 1 cut(s) 2535
AsuHPI GGTGA 6 cut(s) 411, 536, 698, 899, 1922, 2138
AvaI CYCGRG 1 cut(s) 738
AvaII GGWCC 2 cut(s) 721, 793
AxyI CCTNAGG 1 cut(s) 2503
BaeGI GKGCMC 3 cut(s) 1535, 2137, 2318
BanII GRGCYC 2 cut(s) 595, 876
BbsI GAAGAC 4 cut(s) 177, 622, 1988, 2730
Bbv12I GWGCWC 5 cut(s) 595, 876, 1535, 2137, 2473
BbvI GCAGC 9 cut(s) 562, 1274, 1450, 2110, 2371, 2400, 2413, 2631, 2692
BccI CCATC 9 cut(s) 38, 521, 847, 878, 1232, 1940, 2116, 2258, 2719
BceAI ACGGC 4 cut(s) 172, 1076, 1203, 1569
BcgI CGANNNNNNTGC 2 cut(s) 2087, 2121
BciT130I CCWGG 5 cut(s) 313, 1414, 2089, 2397, 2653
BciVI GTATCC 2 cut(s) 567, 1724
BcnI CCSGG 1 cut(s) 2535
BcoDI GTCTC 5 cut(s) 310, 460, 763, 1014, 2069
BfaI CTAG 4 cut(s) 375, 1998, 2616, 2742
BfmI CTRYAG 1 cut(s) 51
BfoI RGCGCY 1 cut(s) 405
BfuAI ACCTGC 1 cut(s) 1714
BfuI GTATCC 2 cut(s) 567, 1724
BmcAI AGTACT 2 cut(s) 1057, 2341
Bme1390I CCNGG 6 cut(s) 313, 1414, 2089, 2397, 2535, 2653
Bme18I GGWCC 2 cut(s) 721, 793
BmeT110I CYCGRG 1 cut(s) 738
BmgT120I GGNCC 3 cut(s) 721, 793, 892
BmiI GGNNCC 3 cut(s) 722, 1511, 2695
BmrFI CCNGG 6 cut(s) 313, 1414, 2089, 2397, 2535, 2653
BmsI GCATC 6 cut(s) 472, 602, 1535, 2070, 2479, 2761
BpiI GAAGAC 4 cut(s) 177, 622, 1988, 2730
BpmI CTGGAG 2 cut(s) 1015, 2557
BpuEI CTTGAG 1 cut(s) 860
BpuMI CCSGG 1 cut(s) 2535
BsaAI YACGTR 1 cut(s) 2516
BsaBI GATNNNNATC 1 cut(s) 1821
BsaI GGTCTC 2 cut(s) 460, 2069
BsaJI CCNNGG 4 cut(s) 737, 2088, 2310, 2605
Bsc4I CCNNNNNNNGG 7 cut(s) 805, 1176, 1209, 1591, 1694, 1723, 2577
Bse118I RCCGGY 2 cut(s) 975, 2391
Bse1I ACTGG 6 cut(s) 470, 628, 2337, 2363, 2574, 2677
Bse21I CCTNAGG 1 cut(s) 2503
Bse3DI GCAATG 4 cut(s) 261, 1311, 1437, 1473
Bse8I GATNNNNATC 1 cut(s) 1821
BseBI CCWGG 5 cut(s) 313, 1414, 2089, 2397, 2653
BseDI CCNNGG 4 cut(s) 737, 2088, 2310, 2605
BseGI GGATG 7 cut(s) 67, 103, 1249, 1327, 1348, 1354, 1951
BseJI GATNNNNATC 1 cut(s) 1821
BseLI CCNNNNNNNGG 7 cut(s) 805, 1176, 1209, 1591, 1694, 1723, 2577
BseMI GCAATG 4 cut(s) 261, 1311, 1437, 1473
BseMII CTCAG 4 cut(s) 524, 2175, 2334, 2517
BseNI ACTGG 6 cut(s) 470, 628, 2337, 2363, 2574, 2677
BseRI GAGGAG 4 cut(s) 20, 726, 1748, 2448
BseSI GKGCMC 3 cut(s) 1535, 2137, 2318
BseXI GCAGC 9 cut(s) 562, 1274, 1450, 2110, 2371, 2400, 2413, 2631, 2692
BseYI CCCAGC 1 cut(s) 979
BsgI GTGCAG 1 cut(s) 1742
Bsh1236I CGCG 3 cut(s) 772, 774, 2320
BshFI GGCC 5 cut(s) 893, 938, 1190, 1584, 2395
BsiHKAI GWGCWC 5 cut(s) 595, 876, 1535, 2137, 2473
BsiHKCI CYCGRG 1 cut(s) 738
BsiSI CCGG 4 cut(s) 976, 1383, 2392, 2534
BslFI GGGAC 2 cut(s) 734, 2777
BslI CCNNNNNNNGG 7 cut(s) 805, 1176, 1209, 1591, 1694, 1723, 2577
BsmAI GTCTC 5 cut(s) 310, 460, 763, 1014, 2069
BsmFI GGGAC 2 cut(s) 734, 2777
BsmI GAATGC 4 cut(s) 1560, 2222, 2329, 2707
BsnI GGCC 5 cut(s) 893, 938, 1190, 1584, 2395
Bso31I GGTCTC 2 cut(s) 460, 2069
BsoBI CYCGRG 1 cut(s) 738
Bsp1286I GDGCHC 6 cut(s) 595, 876, 1535, 2137, 2318, 2473
Bsp1407I TGTACA 1 cut(s) 1470
Bsp143I GATC 4 cut(s) 286, 1768, 1829, 2290
BspACI CCGC 6 cut(s) 12, 709, 774, 1708, 1807, 2061
BspANI GGCC 5 cut(s) 893, 938, 1190, 1584, 2395
BspCNI CTCAG 4 cut(s) 523, 2174, 2335, 2516
BspFNI CGCG 3 cut(s) 772, 774, 2320
BspHI TCATGA 3 cut(s) 40, 912, 2067
BspLI GGNNCC 3 cut(s) 722, 1511, 2695
BspMI ACCTGC 1 cut(s) 1714
BspPI GGATC 3 cut(s) 294, 1837, 2298
BspTNI GGTCTC 2 cut(s) 460, 2069
BsrDI GCAATG 4 cut(s) 261, 1311, 1437, 1473
BsrFI RCCGGY 2 cut(s) 975, 2391
BsrGI TGTACA 1 cut(s) 1470
BsrI ACTGG 6 cut(s) 470, 628, 2337, 2363, 2574, 2677
BssAI RCCGGY 2 cut(s) 975, 2391
BssECI CCNNGG 4 cut(s) 737, 2088, 2310, 2605
BssMI GATC 4 cut(s) 286, 1768, 1829, 2290
BssT1I CCWWGG 1 cut(s) 2310
Bst2UI CCWGG 5 cut(s) 313, 1414, 2089, 2397, 2653
Bst4CI ACNGT 7 cut(s) 321, 519, 1126, 2132, 2192, 2260, 2770
Bst6I CTCTTC 3 cut(s) 78, 268, 1392
BstAUI TGTACA 1 cut(s) 1470
BstBAI YACGTR 1 cut(s) 2516
BstC8I GCNNGC 9 cut(s) 17, 977, 1082, 2085, 2103, 2318, 2393, 2522, 2624
BstDEI CTNAG 5 cut(s) 510, 2161, 2195, 2343, 2503
BstENI CCTNNNNNAGG 1 cut(s) 2575
BstF5I GGATG 7 cut(s) 67, 103, 1249, 1327, 1348, 1354, 1951
BstFNI CGCG 3 cut(s) 772, 774, 2320
BstH2I RGCGCY 1 cut(s) 405
BstHHI GCGC 2 cut(s) 404, 774
BstKTI GATC 4 cut(s) 289, 1771, 1832, 2293
BstMAI GTCTC 5 cut(s) 310, 460, 763, 1014, 2069
BstMBI GATC 4 cut(s) 286, 1768, 1829, 2290
BstMWI GCNNNNNNNGC 2 cut(s) 899, 2326
BstNI CCWGG 5 cut(s) 313, 1414, 2089, 2397, 2653
BstNSI RCATGY 4 cut(s) 19, 930, 1708, 2046
BstSCI CCNGG 6 cut(s) 311, 1412, 2087, 2395, 2533, 2651
BstSFI CTRYAG 1 cut(s) 51
BstSLI GKGCMC 3 cut(s) 1535, 2137, 2318
BstUI CGCG 3 cut(s) 772, 774, 2320
BstV1I GCAGC 9 cut(s) 562, 1274, 1450, 2110, 2371, 2400, 2413, 2631, 2692
BstV2I GAAGAC 4 cut(s) 177, 622, 1988, 2730
BstX2I RGATCY 1 cut(s) 2290
BstXI CCANNNNNNTGG 3 cut(s) 1012, 1520, 2659
BstYI RGATCY 1 cut(s) 2290
Bsu36I CCTNAGG 1 cut(s) 2503
BsuI GTATCC 2 cut(s) 567, 1724
BsuRI GGCC 5 cut(s) 893, 938, 1190, 1584, 2395
BtsCI GGATG 7 cut(s) 67, 103, 1249, 1327, 1348, 1354, 1951
BtsIMutI CAGTG 2 cut(s) 31, 1233
BveI ACCTGC 1 cut(s) 1714
Cac8I GCNNGC 9 cut(s) 17, 977, 1082, 2085, 2103, 2318, 2393, 2522, 2624
CaiI CAGNNNCTG 1 cut(s) 2258
CciI TCATGA 3 cut(s) 40, 912, 2067
CfoI GCGC 2 cut(s) 404, 774
Cfr10I RCCGGY 2 cut(s) 975, 2391
Cfr13I GGNCC 3 cut(s) 721, 793, 892
Csp6I GTAC 7 cut(s) 768, 844, 1056, 1127, 1471, 2046, 2340
CspCI CAANNNNNGTGG 2 cut(s) 2502, 2537
CviQI GTAC 7 cut(s) 768, 844, 1056, 1127, 1471, 2046, 2340
DdeI CTNAG 5 cut(s) 510, 2161, 2195, 2343, 2503
DpnI GATC 4 cut(s) 288, 1770, 1831, 2292
DpnII GATC 4 cut(s) 286, 1768, 1829, 2290
DraI TTTAAA 1 cut(s) 921
EaeI YGGCCR 2 cut(s) 1582, 2393
Eam1104I CTCTTC 3 cut(s) 78, 268, 1392
EarI CTCTTC 3 cut(s) 78, 268, 1392
Ecl136II GAGCTC 2 cut(s) 593, 874
Eco130I CCWWGG 1 cut(s) 2310
Eco24I GRGCYC 2 cut(s) 595, 876
Eco31I GGTCTC 2 cut(s) 460, 2069
Eco47I GGWCC 2 cut(s) 721, 793
Eco53kI GAGCTC 2 cut(s) 593, 874
Eco81I CCTNAGG 1 cut(s) 2503
Eco88I CYCGRG 1 cut(s) 738
EcoICRI GAGCTC 2 cut(s) 593, 874
EcoNI CCTNNNNNAGG 1 cut(s) 2575
EcoRI GAATTC 2 cut(s) 292, 358
EcoRII CCWGG 5 cut(s) 311, 1412, 2087, 2395, 2651
EcoT14I CCWWGG 1 cut(s) 2310
EcoT22I ATGCAT 1 cut(s) 1437
EcoT38I GRGCYC 2 cut(s) 595, 876
ErhI CCWWGG 1 cut(s) 2310
FaqI GGGAC 2 cut(s) 734, 2777
FauI CCCGC 1 cut(s) 767
FauNDI CATATG 2 cut(s) 2173, 2628
FblI GTMKAC 4 cut(s) 145, 225, 2200, 2269
FokI GGATG 7 cut(s) 74, 110, 1256, 1334, 1355, 1361, 1958
FriOI GRGCYC 2 cut(s) 595, 876
FspBI CTAG 4 cut(s) 375, 1998, 2616, 2742
GlaI GCGC 2 cut(s) 403, 773
GsaI CCCAGC 1 cut(s) 983
GsuI CTGGAG 2 cut(s) 1015, 2557
HaeII RGCGCY 1 cut(s) 405
HaeIII GGCC 5 cut(s) 893, 938, 1190, 1584, 2395
HapII CCGG 4 cut(s) 976, 1383, 2392, 2534
HhaI GCGC 2 cut(s) 404, 774
Hin6I GCGC 2 cut(s) 402, 772
HinP1I GCGC 2 cut(s) 402, 772
HincII GTYRAC 2 cut(s) 226, 2201
HindII GTYRAC 2 cut(s) 226, 2201
HindIII AAGCTT 2 cut(s) 105, 1497
HpaII CCGG 4 cut(s) 976, 1383, 2392, 2534
HphI GGTGA 6 cut(s) 411, 536, 698, 899, 1922, 2138
HpyAV CCTTC 5 cut(s) 540, 703, 707, 2012, 2365
HpyCH4III ACNGT 7 cut(s) 321, 519, 1126, 2132, 2192, 2260, 2770
HpyCH4IV ACGT 3 cut(s) 505, 2515, 2657
HpyF10VI GCNNNNNNNGC 2 cut(s) 899, 2326
HpyF3I CTNAG 5 cut(s) 510, 2161, 2195, 2343, 2503
HpySE526I ACGT 3 cut(s) 505, 2515, 2657
HspAI GCGC 2 cut(s) 402, 772
KroI GCCGGC 2 cut(s) 975, 2391
KroNI GCCGGC 2 cut(s) 977, 2393
Kzo9I GATC 4 cut(s) 286, 1768, 1829, 2290
LmnI GCTCC 3 cut(s) 376, 739, 2713
Lsp1109I GCAGC 9 cut(s) 562, 1274, 1450, 2110, 2371, 2400, 2413, 2631, 2692
LweI GCATC 6 cut(s) 472, 602, 1535, 2070, 2479, 2761
MaeI CTAG 4 cut(s) 375, 1998, 2616, 2742
MaeII ACGT 3 cut(s) 505, 2515, 2657
MaeIII GTNAC 8 cut(s) 1586, 1846, 1882, 1928, 1961, 2126, 2243, 2399
MalI GATC 4 cut(s) 288, 1770, 1831, 2292
MboI GATC 4 cut(s) 286, 1768, 1829, 2290
MfeI CAATTG 2 cut(s) 583, 1629
MflI RGATCY 1 cut(s) 2290
MhlI GDGCHC 6 cut(s) 595, 876, 1535, 2137, 2318, 2473
MluI ACGCGT 1 cut(s) 2318
MlyI GAGTC 7 cut(s) 142, 227, 851, 1380, 1793, 1949, 2524
MmeI TCCRAC 3 cut(s) 264, 1923, 2640
Mph1103I ATGCAT 1 cut(s) 1437
MroNI GCCGGC 2 cut(s) 975, 2391
MroXI GAANNNNTTC 1 cut(s) 1514
MseI TTAA 6 cut(s) 177, 207, 920, 1196, 2483, 2541
MslI CAYNNNNRTG 2 cut(s) 1976, 2277
MspA1I CMGCKG 2 cut(s) 1265, 2061
MspI CCGG 4 cut(s) 976, 1383, 2392, 2534
MspR9I CCNGG 6 cut(s) 313, 1414, 2089, 2397, 2535, 2653
MunI CAATTG 2 cut(s) 583, 1629
Mva1269I GAATGC 4 cut(s) 1560, 2222, 2329, 2707
MvaI CCWGG 5 cut(s) 313, 1414, 2089, 2397, 2653
MvnI CGCG 3 cut(s) 772, 774, 2320
MwoI GCNNNNNNNGC 2 cut(s) 899, 2326
NaeI GCCGGC 2 cut(s) 977, 2393
NciI CCSGG 1 cut(s) 2535
NdeI CATATG 2 cut(s) 2173, 2628
NdeII GATC 4 cut(s) 286, 1768, 1829, 2290
NgoMIV GCCGGC 2 cut(s) 975, 2391
NlaIV GGNNCC 3 cut(s) 722, 1511, 2695
NmuCI GTSAC 4 cut(s) 1928, 1961, 2126, 2399
NsiI ATGCAT 1 cut(s) 1437
NspI RCATGY 4 cut(s) 19, 930, 1708, 2046
PaeI GCATGC 1 cut(s) 19
PagI TCATGA 3 cut(s) 40, 912, 2067
PcsI WCGNNNNNNNCGW 1 cut(s) 222
PctI GAATGC 4 cut(s) 1560, 2222, 2329, 2707
PdiI GCCGGC 2 cut(s) 977, 2393
PdmI GAANNNNTTC 1 cut(s) 1514
PfeI GAWTC 5 cut(s) 21, 1406, 1822, 2009, 2648
PflMI CCANNNNNTGG 1 cut(s) 1694
PfoI TCCNGGA 1 cut(s) 2651
PleI GAGTC 7 cut(s) 141, 226, 851, 1380, 1792, 1948, 2524
PpsI GAGTC 7 cut(s) 141, 226, 851, 1380, 1792, 1948, 2524
Ppu21I YACGTR 1 cut(s) 2516
Psp124BI GAGCTC 2 cut(s) 595, 876
Psp6I CCWGG 5 cut(s) 311, 1412, 2087, 2395, 2651
PspFI CCCAGC 1 cut(s) 979
PspGI CCWGG 5 cut(s) 311, 1412, 2087, 2395, 2651
PspN4I GGNNCC 3 cut(s) 722, 1511, 2695
PspPI GGNCC 3 cut(s) 721, 793, 892
PstNI CAGNNNCTG 1 cut(s) 2258
PsuI RGATCY 1 cut(s) 2290
PvuII CAGCTG 1 cut(s) 1265
RsaI GTAC 7 cut(s) 769, 845, 1057, 1128, 1472, 2047, 2341
RsaNI GTAC 7 cut(s) 768, 844, 1056, 1127, 1471, 2046, 2340
RseI CAYNNNNRTG 2 cut(s) 1976, 2277
SacI GAGCTC 2 cut(s) 595, 876
SalI GTCGAC 2 cut(s) 224, 2199
SaqAI TTAA 6 cut(s) 177, 207, 920, 1196, 2483, 2541
Sau3AI GATC 4 cut(s) 286, 1768, 1829, 2290
Sau96I GGNCC 3 cut(s) 721, 793, 892
ScaI AGTACT 2 cut(s) 1057, 2341
SchI GAGTC 7 cut(s) 142, 227, 851, 1380, 1793, 1949, 2524
ScrFI CCNGG 6 cut(s) 313, 1414, 2089, 2397, 2535, 2653
SduI GDGCHC 6 cut(s) 595, 876, 1535, 2137, 2318, 2473
SfaNI GCATC 6 cut(s) 472, 602, 1535, 2070, 2479, 2761
SfcI CTRYAG 1 cut(s) 51
SinI GGWCC 2 cut(s) 721, 793
SmiMI CAYNNNNRTG 2 cut(s) 1976, 2277
SmlI CTYRAG 1 cut(s) 875
SmoI CTYRAG 1 cut(s) 875
SphI GCATGC 1 cut(s) 19
SsiI CCGC 6 cut(s) 12, 709, 774, 1708, 1807, 2061
SspMI CTAG 4 cut(s) 375, 1998, 2616, 2742
SstI GAGCTC 2 cut(s) 595, 876
StyD4I CCNGG 6 cut(s) 311, 1412, 2087, 2395, 2533, 2651
StyI CCWWGG 1 cut(s) 2310
TaaI ACNGT 7 cut(s) 321, 519, 1126, 2132, 2192, 2260, 2770
TaiI ACGT 3 cut(s) 508, 2518, 2660
TaqII GACCGA 1 cut(s) 2597
TatI WGTACW 4 cut(s) 1055, 1470, 2045, 2339
TauI GCSGC 1 cut(s) 15
TfiI GAWTC 5 cut(s) 21, 1406, 1822, 2009, 2648
Tru1I TTAA 6 cut(s) 177, 207, 920, 1196, 2483, 2541
Tru9I TTAA 6 cut(s) 177, 207, 920, 1196, 2483, 2541
TscAI CASTG 2 cut(s) 31, 1240
TseFI GTSAC 4 cut(s) 1928, 1961, 2126, 2399
TseI GCWGC 9 cut(s) 550, 1262, 1463, 2098, 2359, 2388, 2426, 2619, 2705
Tsp45I GTSAC 4 cut(s) 1928, 1961, 2126, 2399
TspGWI ACGGA 1 cut(s) 2462
TspRI CASTG 2 cut(s) 31, 1240
Van91I CCANNNNNTGG 1 cut(s) 1694
VneI GTGCAC 2 cut(s) 1531, 2133
VpaK11BI GGWCC 2 cut(s) 721, 793
XagI CCTNNNNNAGG 1 cut(s) 2575
XapI RAATTY 7 cut(s) 292, 358, 644, 815, 916, 941, 1564
XceI RCATGY 4 cut(s) 19, 930, 1708, 2046
XcmI CCANNNNNNNNNTGG 2 cut(s) 319, 1724
XmiI GTMKAC 4 cut(s) 145, 225, 2200, 2269
XmnI GAANNNNTTC 1 cut(s) 1514
XspI CTAG 4 cut(s) 375, 1998, 2616, 2742
ZrmI AGTACT 2 cut(s) 1057, 2341
Zsp2I ATGCAT 1 cut(s) 1437
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.