Rmu_sc0006675.1_g000007

Protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006675.1
OG0000074
Physical Location & Seq
Forward (+)
29667 .. 37064
7398 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006675.1_g000007.1.cds

Sequence Viewer

Length: 1614 bp
atggccattgatcccgattcaagagacgtgttgacgacgctgggtggcgtgaacaatatagagttttgccagcggcttggcgcgggtcgactggcattttcccaatggtatcttcacaaggcttcgttgtggaaacaatcccttgtggctgccgattcgcttgaggcaggcagtggttttggttgcgtaaagtcagtggcagcggaccagcttggggtgggagcagtcgtggttgaagtcgaaaaaatccgaaggggaaccgccataagcactgtcgacttcaaccgtcagcccagccggcacaggtctcccgttcaaagggcgcaaagccccggttcacaccttggagactattccaacgtcaactgtaagccgaacagtgttcggcggaatcgggtcattgttatgggattagttccttccatgaaggagcttgggatgtggattatggagtccagtgctgatgtttatgtggaaagtgataaagtccagtccatagaagaagaacaatttgagtcagacacggatgacactaatgggaagccatatgaagatcttgaggctgcagacatgataggtatgaagtttggatctgttaatgaagtggacttattctattcattttattcccttgccatgggttttagcttcagaaatcaaaagttggacaaagaggctgataccgtagtacgaaggcagctggtttgtagtaaggaagggattagaaaaaaaaaaagtcgtttggaagagcagatttcggcttcctatctccctacttcacggaagggagcctcgaaagcaccatttatgcagtcaggtggcataggtgttgatgtagagggaaagctttgtaatatgttctggagagacacagtgtcaatgcttgattacaatagttttggtgatgtgtttattctagatagcacatacaagaccaacatatacgggaaaccgctggctgtttttgttggtgtgaacaaccacagggccataattttatttggatgcgcattgcttgttgatgagatggaggacacttacaattgggtcctaacagcattcttagattcaatgaatggaaaaagaccaatatctgttatcactgatggatacgaggcaatgcgaaatgcagtgaatgggggatgtggatgttataatagacttggtcacaacgtccggacattccctctcagaaaagaagttgatgtcaactgtgatgcacataatgctacgaatcatgctgctaattcgaatgttgctaaacatgaaaggggaggtcatagttcggtttttgcctccccaggccctattggatcagttggtgtacgccactctacatctactttccgaagtaatcgatctgcctttgcaccgaccttccaaaatgatgaggatttggccttccttcctccatcacgcatccaacacatgatccatcatgttgaagaggcgaggacatttgatttcttttccagccatgacaacatattgtcttctgtgttaggtgcgaatggaaaccttcgtatggaagatcaatctatctcttctaaccaaccaagtgcatcacactatactaggggtccaaacccttttgttcatcaatggttttattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

537

Amino Acids

59.47

Weight (kDa)

6.36

Isoelectric Point (pI)

42.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1155
Acc16I TGCGCA 1 cut(s) 1009
AccI GTMKAC 2 cut(s) 88, 276
AccII CGCG 1 cut(s) 83
AccIII TCCGGA 1 cut(s) 1176
AciI CCGC 6 cut(s) 73, 83, 203, 261, 388, 953
AclWI GGATC 4 cut(s) 5, 598, 1321, 1426
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 1 cut(s) 634
AfaI GTAC 2 cut(s) 690, 1326
AfiI CCNNNNNNNGG 4 cut(s) 214, 318, 637, 1525
AflIII ACRYGT 1 cut(s) 27
AgsI TTSAA 6 cut(s) 21, 236, 283, 317, 1071, 1445
AhdI GACNNNNNGTC 1 cut(s) 874
AjiI CACGTC 1 cut(s) 28
AjnI CCWGG 1 cut(s) 1300
AjuI GAANNNNNNNTTGG 2 cut(s) 96, 128
AluBI AGCT 5 cut(s) 211, 433, 648, 700, 847
AluI AGCT 5 cut(s) 211, 433, 648, 700, 847
Alw26I GTCTC 4 cut(s) 18, 312, 342, 861
AlwI GGATC 4 cut(s) 5, 598, 1321, 1426
Aor13HI TCCGGA 1 cut(s) 1176
AoxI GGCC 4 cut(s) 3, 987, 1303, 1398
ApeKI GCWGC 5 cut(s) 149, 200, 563, 697, 1241
AspLEI GCGC 3 cut(s) 83, 325, 1010
AspS9I GGNCC 5 cut(s) 205, 987, 1048, 1304, 1580
AsuC2I CCSGG 1 cut(s) 333
AsuHPI GGTGA 1 cut(s) 914
AsuII TTCGAA 1 cut(s) 1250
AvaII GGWCC 3 cut(s) 205, 1048, 1580
BaeI ACNNNNGTAYC 2 cut(s) 672, 705
BalI TGGCCA 1 cut(s) 5
BbsI GAAGAC 1 cut(s) 1485
BbvI GCAGC 5 cut(s) 136, 212, 550, 709, 1228
BccI CCATC 4 cut(s) 1021, 1100, 1420, 1443
BciT130I CCWGG 1 cut(s) 1302
BciVI GTATCC 1 cut(s) 1103
BcnI CCSGG 1 cut(s) 333
BcoDI GTCTC 4 cut(s) 18, 312, 342, 861
BfaI CTAG 2 cut(s) 917, 1575
BfmI CTRYAG 1 cut(s) 564
BfuI GTATCC 1 cut(s) 1103
BglI GCCNNNNNGGC 1 cut(s) 298
BglII AGATCT 1 cut(s) 553
BisI GCNGC 6 cut(s) 74, 150, 201, 564, 698, 1242
BlsI GCNGC 6 cut(s) 75, 151, 202, 565, 699, 1243
Bme1390I CCNGG 2 cut(s) 333, 1302
Bme18I GGWCC 3 cut(s) 205, 1048, 1580
BmeRI GACNNNNNGTC 1 cut(s) 874
BmgBI CACGTC 1 cut(s) 28
BmgT120I GGNCC 5 cut(s) 205, 987, 1048, 1304, 1580
BmiI GGNNCC 4 cut(s) 259, 790, 1049, 1581
BmrFI CCNGG 2 cut(s) 333, 1302
BmsI GCATC 4 cut(s) 995, 1207, 1428, 1571
BpiI GAAGAC 1 cut(s) 1485
BpmI CTGGAG 1 cut(s) 883
Bpu14I TTCGAA 1 cut(s) 1250
BpuEI CTTGAG 2 cut(s) 182, 578
BpuMI CCSGG 1 cut(s) 333
Bsa29I ATCGAT 1 cut(s) 1357
BsaI GGTCTC 1 cut(s) 312
BsaJI CCNNGG 4 cut(s) 331, 343, 636, 1300
BsaWI WCCGGW 1 cut(s) 1176
BsaXI ACNNNNNCTCC 2 cut(s) 213, 243
Bsc4I CCNNNNNNNGG 4 cut(s) 214, 318, 637, 1525
Bse118I RCCGGY 1 cut(s) 297
Bse1I ACTGG 3 cut(s) 96, 456, 490
Bse3DI GCAATG 2 cut(s) 1010, 1125
BseAI TCCGGA 1 cut(s) 1176
BseBI CCWGG 1 cut(s) 1302
BseCI ATCGAT 1 cut(s) 1357
BseDI CCNNGG 4 cut(s) 331, 343, 636, 1300
BseGI GGATG 6 cut(s) 444, 532, 1010, 1148, 1154, 1419
BseLI CCNNNNNNNGG 4 cut(s) 214, 318, 637, 1525
BseMI GCAATG 2 cut(s) 1010, 1125
BseMII CTCAG 1 cut(s) 1204
BseNI ACTGG 3 cut(s) 96, 456, 490
BseXI GCAGC 5 cut(s) 136, 212, 550, 709, 1228
BseYI CCCAGC 2 cut(s) 40, 293
Bsh1236I CGCG 1 cut(s) 83
BshFI GGCC 4 cut(s) 5, 989, 1305, 1400
BshVI ATCGAT 1 cut(s) 1357
BsiSI CCGG 3 cut(s) 298, 333, 1177
BslI CCNNNNNNNGG 4 cut(s) 214, 318, 637, 1525
BsmAI GTCTC 4 cut(s) 18, 312, 342, 861
BsmBI CGTCTC 1 cut(s) 18
BsmI GAATGC 1 cut(s) 1058
BsnI GGCC 4 cut(s) 5, 989, 1305, 1400
Bso31I GGTCTC 1 cut(s) 312
Bsp119I TTCGAA 1 cut(s) 1250
Bsp13I TCCGGA 1 cut(s) 1176
Bsp143I GATC 7 cut(s) 10, 553, 590, 1313, 1358, 1431, 1531
Bsp19I CCATGG 1 cut(s) 636
BspACI CCGC 6 cut(s) 73, 83, 203, 261, 388, 953
BspANI GGCC 4 cut(s) 5, 989, 1305, 1400
BspCNI CTCAG 1 cut(s) 1203
BspDI ATCGAT 1 cut(s) 1357
BspEI TCCGGA 1 cut(s) 1176
BspFNI CGCG 1 cut(s) 83
BspLI GGNNCC 4 cut(s) 259, 790, 1049, 1581
BspMAI CTGCAG 1 cut(s) 568
BspPI GGATC 4 cut(s) 5, 598, 1321, 1426
BspQI GCTCTTC 1 cut(s) 741
BspT104I TTCGAA 1 cut(s) 1250
BspTNI GGTCTC 1 cut(s) 312
BsrDI GCAATG 2 cut(s) 1010, 1125
BsrFI RCCGGY 1 cut(s) 297
BsrI ACTGG 3 cut(s) 96, 456, 490
BssAI RCCGGY 1 cut(s) 297
BssECI CCNNGG 4 cut(s) 331, 343, 636, 1300
BssMI GATC 7 cut(s) 10, 553, 590, 1313, 1358, 1431, 1531
BssT1I CCWWGG 2 cut(s) 343, 636
Bst2UI CCWGG 1 cut(s) 1302
Bst4CI ACNGT 7 cut(s) 274, 287, 368, 380, 685, 874, 1214
Bst6I CTCTTC 3 cut(s) 741, 1440, 1549
BstAPI GCANNNNNTGC 1 cut(s) 1226
BstBI TTCGAA 1 cut(s) 1250
BstC8I GCNNGC 4 cut(s) 71, 169, 299, 957
BstDEI CTNAG 2 cut(s) 1063, 1190
BstDSI CCRYGG 1 cut(s) 636
BstF5I GGATG 6 cut(s) 444, 532, 1010, 1148, 1154, 1419
BstFNI CGCG 1 cut(s) 83
BstHHI GCGC 3 cut(s) 83, 325, 1010
BstKTI GATC 7 cut(s) 13, 556, 593, 1316, 1361, 1434, 1534
BstMAI GTCTC 4 cut(s) 18, 312, 342, 861
BstMBI GATC 7 cut(s) 10, 553, 590, 1313, 1358, 1431, 1531
BstMWI GCNNNNNNNGC 3 cut(s) 298, 797, 1226
BstNI CCWGG 1 cut(s) 1302
BstSCI CCNGG 2 cut(s) 331, 1300
BstSFI CTRYAG 1 cut(s) 564
BstUI CGCG 1 cut(s) 83
BstV1I GCAGC 5 cut(s) 136, 212, 550, 709, 1228
BstV2I GAAGAC 1 cut(s) 1485
BstX2I RGATCY 2 cut(s) 553, 590
BstXI CCANNNNNNTGG 1 cut(s) 77
BstYI RGATCY 2 cut(s) 553, 590
Bsu15I ATCGAT 1 cut(s) 1357
BsuI GTATCC 1 cut(s) 1103
BsuRI GGCC 4 cut(s) 5, 989, 1305, 1400
BsuTUI ATCGAT 1 cut(s) 1357
BtgI CCRYGG 1 cut(s) 636
BtrI CACGTC 1 cut(s) 28
BtsCI GGATG 6 cut(s) 444, 532, 1010, 1148, 1154, 1419
BtsI GCAGTG 2 cut(s) 178, 1137
BtsIMutI CAGTG 8 cut(s) 178, 201, 270, 385, 463, 879, 1101, 1137
Cac8I GCNNGC 4 cut(s) 71, 169, 299, 957
CfoI GCGC 3 cut(s) 83, 325, 1010
Cfr10I RCCGGY 1 cut(s) 297
Cfr13I GGNCC 5 cut(s) 205, 987, 1048, 1304, 1580
ClaI ATCGAT 1 cut(s) 1357
CseI GACGC 1 cut(s) 46
Csp6I GTAC 2 cut(s) 689, 1325
CviAII CATG 8 cut(s) 424, 571, 637, 1238, 1265, 1429, 1439, 1478
CviQI GTAC 2 cut(s) 689, 1325
DdeI CTNAG 2 cut(s) 1063, 1190
DpnI GATC 7 cut(s) 12, 555, 592, 1315, 1360, 1433, 1533
DpnII GATC 7 cut(s) 10, 553, 590, 1313, 1358, 1431, 1531
DriI GACNNNNNGTC 1 cut(s) 874
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 3 cut(s) 741, 1440, 1549
Eam1105I GACNNNNNGTC 1 cut(s) 874
EarI CTCTTC 3 cut(s) 741, 1440, 1549
EciI GGCGGA 1 cut(s) 403
Eco130I CCWWGG 2 cut(s) 343, 636
Eco31I GGTCTC 1 cut(s) 312
Eco47I GGWCC 3 cut(s) 205, 1048, 1580
Eco57I CTGAAG 1 cut(s) 634
EcoO109I RGGNCCY 2 cut(s) 1048, 1304
EcoRII CCWGG 1 cut(s) 1300
EcoT14I CCWWGG 2 cut(s) 343, 636
ErhI CCWWGG 2 cut(s) 343, 636
Esp3I CGTCTC 1 cut(s) 18
FaeI CATG 8 cut(s) 427, 574, 640, 1241, 1268, 1432, 1442, 1481
FatI CATG 8 cut(s) 423, 570, 636, 1237, 1264, 1428, 1438, 1477
FauI CCCGC 1 cut(s) 76
FauNDI CATATG 1 cut(s) 547
FblI GTMKAC 2 cut(s) 88, 276
Fnu4HI GCNGC 6 cut(s) 74, 150, 201, 564, 698, 1242
FokI GGATG 6 cut(s) 451, 539, 1017, 1155, 1161, 1406
Fsp4HI GCNGC 6 cut(s) 74, 150, 201, 564, 698, 1242
FspAI RTGCGCAY 1 cut(s) 1009
FspBI CTAG 2 cut(s) 917, 1575
FspI TGCGCA 1 cut(s) 1009
GlaI GCGC 3 cut(s) 82, 324, 1009
GluI GCNGC 6 cut(s) 74, 150, 201, 564, 698, 1242
GsaI CCCAGC 2 cut(s) 44, 297
GsuI CTGGAG 1 cut(s) 883
HaeIII GGCC 4 cut(s) 5, 989, 1305, 1400
HapII CCGG 3 cut(s) 298, 333, 1177
HgaI GACGC 1 cut(s) 46
HhaI GCGC 3 cut(s) 83, 325, 1010
Hin1II CATG 8 cut(s) 427, 574, 640, 1241, 1268, 1432, 1442, 1481
Hin6I GCGC 3 cut(s) 81, 323, 1008
HinP1I GCGC 3 cut(s) 81, 323, 1008
HincII GTYRAC 5 cut(s) 33, 89, 277, 364, 1210
HindII GTYRAC 5 cut(s) 33, 89, 277, 364, 1210
HindIII AAGCTT 1 cut(s) 845
HinfI GANTC 7 cut(s) 17, 155, 391, 452, 515, 1067, 1234
HpaII CCGG 3 cut(s) 298, 333, 1177
HphI GGTGA 1 cut(s) 914
Hpy188I TCNGA 5 cut(s) 251, 520, 653, 1193, 1349
Hpy188III TCNNGA 6 cut(s) 14, 21, 557, 862, 917, 1177
Hpy99I CGWCG 1 cut(s) 40
HpyCH4III ACNGT 7 cut(s) 274, 287, 368, 380, 685, 874, 1214
HpyCH4IV ACGT 3 cut(s) 27, 360, 1173
HpyCH4V TGCA 6 cut(s) 566, 811, 1130, 1220, 1370, 1562
HpyF10VI GCNNNNNNNGC 3 cut(s) 298, 797, 1226
HpyF3I CTNAG 2 cut(s) 1063, 1190
HpySE526I ACGT 3 cut(s) 27, 360, 1173
Hsp92II CATG 8 cut(s) 427, 574, 640, 1241, 1268, 1432, 1442, 1481
HspAI GCGC 3 cut(s) 81, 323, 1008
Kpn2I TCCGGA 1 cut(s) 1176
KroI GCCGGC 1 cut(s) 297
KroNI GCCGGC 1 cut(s) 299
Kzo9I GATC 7 cut(s) 10, 553, 590, 1313, 1358, 1431, 1531
LguI GCTCTTC 1 cut(s) 741
LmnI GCTCC 3 cut(s) 221, 430, 788
Lsp1109I GCAGC 5 cut(s) 136, 212, 550, 709, 1228
LweI GCATC 4 cut(s) 995, 1207, 1428, 1571
MaeI CTAG 2 cut(s) 917, 1575
MaeII ACGT 3 cut(s) 27, 360, 1173
MaeIII GTNAC 1 cut(s) 1166
MalI GATC 7 cut(s) 12, 555, 592, 1315, 1360, 1433, 1533
MboI GATC 7 cut(s) 10, 553, 590, 1313, 1358, 1431, 1531
MboII GAAGA 9 cut(s) 104, 512, 515, 563, 758, 1457, 1485, 1536, 1541
MfeI CAATTG 1 cut(s) 1042
MflI RGATCY 2 cut(s) 553, 590
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 4 cut(s) 509, 993, 1042, 1246
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 461, 524
MmeI TCCRAC 3 cut(s) 381, 645, 1447
Mox20I TGGCCA 1 cut(s) 5
MroI TCCGGA 1 cut(s) 1176
MroNI GCCGGC 1 cut(s) 297
MscI TGGCCA 1 cut(s) 5
MseI TTAA 1 cut(s) 597
MslI CAYNNNNRTG 1 cut(s) 404
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 4 cut(s) 73, 203, 700, 955
MspI CCGG 3 cut(s) 298, 333, 1177
MspR9I CCNGG 2 cut(s) 333, 1302
MunI CAATTG 1 cut(s) 1042
Mva1269I GAATGC 1 cut(s) 1058
MvaI CCWGG 1 cut(s) 1302
MvnI CGCG 1 cut(s) 83
MwoI GCNNNNNNNGC 3 cut(s) 298, 797, 1226
NaeI GCCGGC 1 cut(s) 299
NciI CCSGG 1 cut(s) 333
NcoI CCATGG 1 cut(s) 636
NdeI CATATG 1 cut(s) 547
NdeII GATC 7 cut(s) 10, 553, 590, 1313, 1358, 1431, 1531
NgoMIV GCCGGC 1 cut(s) 297
NlaIII CATG 8 cut(s) 427, 574, 640, 1241, 1268, 1432, 1442, 1481
NlaIV GGNNCC 4 cut(s) 259, 790, 1049, 1581
NmuCI GTSAC 1 cut(s) 1166
NsbI TGCGCA 1 cut(s) 1009
NspV TTCGAA 1 cut(s) 1250
PciSI GCTCTTC 1 cut(s) 741
PctI GAATGC 1 cut(s) 1058
PdiI GCCGGC 1 cut(s) 299
PfeI GAWTC 5 cut(s) 17, 155, 391, 1067, 1234
PflFI GACNNNGTC 1 cut(s) 1164
PkrI GCNGC 6 cut(s) 75, 151, 202, 565, 699, 1243
PleI GAGTC 2 cut(s) 460, 523
PpsI GAGTC 2 cut(s) 460, 523
PpuMI RGGWCCY 1 cut(s) 1048
PsiI TTATAA 1 cut(s) 1155
Psp5II RGGWCCY 1 cut(s) 1048
Psp6I CCWGG 1 cut(s) 1300
PspFI CCCAGC 2 cut(s) 40, 293
PspGI CCWGG 1 cut(s) 1300
PspN4I GGNNCC 4 cut(s) 259, 790, 1049, 1581
PspPI GGNCC 5 cut(s) 205, 987, 1048, 1304, 1580
PspPPI RGGWCCY 1 cut(s) 1048
PstI CTGCAG 1 cut(s) 568
PsuI RGATCY 2 cut(s) 553, 590
PsyI GACNNNGTC 1 cut(s) 1164
PvuII CAGCTG 1 cut(s) 700
RsaI GTAC 2 cut(s) 690, 1326
RsaNI GTAC 2 cut(s) 689, 1325
RseI CAYNNNNRTG 1 cut(s) 404
SalI GTCGAC 2 cut(s) 87, 275
SapI GCTCTTC 1 cut(s) 741
SaqAI TTAA 1 cut(s) 597
SatI GCNGC 6 cut(s) 74, 150, 201, 564, 698, 1242
Sau3AI GATC 7 cut(s) 10, 553, 590, 1313, 1358, 1431, 1531
Sau96I GGNCC 5 cut(s) 205, 987, 1048, 1304, 1580
SchI GAGTC 2 cut(s) 461, 524
ScrFI CCNGG 2 cut(s) 333, 1302
SfaNI GCATC 4 cut(s) 995, 1207, 1428, 1571
SfcI CTRYAG 1 cut(s) 564
SfuI TTCGAA 1 cut(s) 1250
SinI GGWCC 3 cut(s) 205, 1048, 1580
SmiMI CAYNNNNRTG 1 cut(s) 404
SmlI CTYRAG 2 cut(s) 161, 557
SmoI CTYRAG 2 cut(s) 161, 557
Sse9I AATT 4 cut(s) 509, 993, 1042, 1246
SsiI CCGC 6 cut(s) 73, 83, 203, 261, 388, 953
SspMI CTAG 2 cut(s) 917, 1575
StyD4I CCNGG 2 cut(s) 331, 1300
StyI CCWWGG 2 cut(s) 343, 636
TaaI ACNGT 7 cut(s) 274, 287, 368, 380, 685, 874, 1214
TaiI ACGT 3 cut(s) 30, 363, 1176
TaqI TCGA 6 cut(s) 88, 240, 276, 794, 1250, 1357
TasI AATT 4 cut(s) 509, 993, 1042, 1246
TauI GCSGC 1 cut(s) 76
TfiI GAWTC 5 cut(s) 17, 155, 391, 1067, 1234
Tru1I TTAA 1 cut(s) 597
Tru9I TTAA 1 cut(s) 597
TscAI CASTG 8 cut(s) 178, 201, 277, 385, 463, 879, 1108, 1137
TseFI GTSAC 1 cut(s) 1166
TseI GCWGC 5 cut(s) 149, 200, 563, 697, 1241
Tsp45I GTSAC 1 cut(s) 1166
TspDTI ATGAA 8 cut(s) 440, 564, 596, 609, 615, 1088, 1281, 1586
TspGWI ACGGA 2 cut(s) 539, 796
TspRI CASTG 8 cut(s) 178, 201, 277, 385, 463, 879, 1108, 1137
Tth111I GACNNNGTC 1 cut(s) 1164
VpaK11BI GGWCC 3 cut(s) 205, 1048, 1580
XbaI TCTAGA 1 cut(s) 916
XmiI GTMKAC 2 cut(s) 88, 276
XspI CTAG 2 cut(s) 917, 1575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.