Rmu_sc0004482.1_g000011

Protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004482.1
OG0000074
Physical Location & Seq
Forward (+)
47958 .. 50300
2343 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004482.1_g000011.1.cds

Sequence Viewer

Length: 2343 bp
atggacttgaacagtgaacaacgagctggtttagaagattatgttgaggagatggaagaaacatatttgtcagaaggtgttgaaatggatgattgcacacattacagagggaagccctataaggatctgacattggaggatttgaatggcgttgagtttaaaacccttgaggaagtggaaaaattctactcttattattcactggcgaaggggtttagcatgaggaagtgtaggctggacaagaatcgtgcacgtacactggtcattagaagagatcttgtttgctcgaagcaaggtatgagaagagatagtggcaagaaagatagtggtcctcgtgaagaggcagctttgaaggaatatccttatgatggactgcagaatgtgaaggagaagcatggcatgaccaatcggaggtcagttgggaataatagtgagaccaatccaactggccacaactctaacaagaaacttcgcagaaacacccgccgaatatctagaggaaattgcccagcaaggttcactgtccgactttgtacaaaaaggggggtgtactatgcaactgaattcatcactgaacacaaccattctttggctaaacctgagcaccgtcagtttctaagatcacaacgacatgtaagggatgacgcccttgcacaagtcaatgcattgaggaaggtttcagtgagaatatgtcgtgcttatgagtacttggtgcaccaagcgggagggtacaagttcgttggatttacgttgaaggatttatacaatgccatgcatggagaaagggcagaagttatgattgacggggatgcacaatcctcaattacttggatgaatttgaaagcattgcaggaccctaatttttcttgcatattcagtgttgatgtggagggcagacttgccaatatgttttggcgcgatggtcagtcgttgactgattacaatgcctttggcgatgttctgattttcgatagcacctacaaaagcaacatatatgaaaagcccttggcagtatttgtaggttgtaataaccaccgtgccactgtcctctttggttgcgcattgttagttgatgaaacagaggaaacttataattgggtgataacagctttcctcacctcaatgaacaagaaaaaacctatttctgtgatcacagatggtgatgatgctatgcggaatgcggtaactaatcttatacctgaggccagacatcgtctttgtgcatggcacattggaaaaaatgtttgtcaacatttgaaagatgtggacacacaaaggtacttcttctattttatctttgccggattgactgttgaggaatgggaatcacaatggcatgtttttgtggcaatgaaccggttggaaaacaacaaatgggtcaatagtatgtaccacaaacgcgagaggtgggcggaggccttttttcgtgaccatttctttgggggaatatgcagcacacaacgatgtgaagggatgcatcgaaatctaaaaggggggattgggcgttatatgcgactatttgaggtcttgccccgcatggaaaaaacaattgagaggatacggaatcgggttctacttgatgactatcgatccgagcaatttcaaccagtgtatggcacacacatgctttgcttggaagaggagatagggaagaaattcacacatgacgtattcctgttaataagggatcagattaaattcgagtcaaagtttgttgtcggcaatgtagatgttaatatagaaacaggtgcatcattgttcatgatctcccagtatgaaaagccggagcgtcggtggattgtgtcctgcaacaacaatgaaaagaatgtaaccttcctttgttcatgccaactttttgagtctgatggcattccatgctgtcacattttttcggtcctcaaatatcagatgcggacaacattcccagattcccttgtgaaacaaaggtggacaaaggaagccactgttaagaagactttgtcgagtttgggattggagaatgataattctgttcagcttgctcgatatggtgatttgatgtcagcttgtgctaaattttgtcatcttgcttcttttagcgaggaggggtatgaagaaaccaaggctgcccttagccggttgaccatccgtgcgcagaaataccgtgttccaaaccagaataccgttcaatttgatagttgtgaggggctccaccccaatgtcatcaagaataccgttcaatttgatagttgccctatccgggttagttgtgggcattggctccttcacattcacctcaggtttgtagtgtttcattatctccgagacgatggttccgactgcttcttccttgaatgtcattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

780

Amino Acids

90.75

Weight (kDa)

8.33

Isoelectric Point (pI)

45.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1092
Acc16I TGCGCA 2 cut(s) 1060, 2133
AccB7I CCANNNNNTGG 2 cut(s) 589, 1613
AccII CGCG 2 cut(s) 918, 1401
AciI CCGC 7 cut(s) 484, 722, 1174, 1181, 1412, 1534, 1912
AclWI GGATC 3 cut(s) 132, 1584, 1695
AcoI YGGCCR 1 cut(s) 448
AcsI RAATTY 6 cut(s) 182, 563, 835, 1655, 1697, 2054
AcyI GRCGYC 1 cut(s) 645
AfaI GTAC 7 cut(s) 256, 535, 551, 707, 731, 1280, 1391
AfiI CCNNNNNNNGG 6 cut(s) 368, 411, 589, 1613, 2115, 2239
AflIII ACRYGT 1 cut(s) 631
AgeI ACCGGT 1 cut(s) 1356
AluBI AGCT 5 cut(s) 26, 347, 1109, 2017, 2045
AluI AGCT 5 cut(s) 26, 347, 1109, 2017, 2045
Alw21I GWGCWC 3 cut(s) 253, 606, 717
Alw26I GTCTC 2 cut(s) 428, 2298
Alw44I GTGCAC 2 cut(s) 249, 713
AlwI GGATC 3 cut(s) 132, 1584, 1695
AoxI GGCC 3 cut(s) 448, 1203, 1416
ApaLI GTGCAC 2 cut(s) 249, 713
ApeKI GCWGC 3 cut(s) 344, 1452, 2105
ApoI RAATTY 6 cut(s) 182, 563, 835, 1655, 1697, 2054
ArsI GACNNNNNNTTYG 4 cut(s) 1200, 1232, 1421, 1453
AsiGI ACCGGT 1 cut(s) 1356
Asp700I GAANNNNTTC 1 cut(s) 1655
AspLEI GCGC 3 cut(s) 918, 1061, 2134
AspS9I GGNCC 3 cut(s) 329, 853, 1894
AsuC2I CCSGG 1 cut(s) 2240
AsuHPI GGTGA 5 cut(s) 1108, 1111, 1172, 2042, 2264
AvaII GGWCC 3 cut(s) 329, 853, 1894
AxyI CCTNAGG 2 cut(s) 1200, 2276
BaeGI GKGCMC 2 cut(s) 253, 717
BalI TGGCCA 1 cut(s) 450
BanII GRGCYC 1 cut(s) 2190
BarI GAAGNNNNNNTAC 2 cut(s) 746, 778
BauI CACGAG 1 cut(s) 333
BbsI GAAGAC 1 cut(s) 1979
Bbv12I GWGCWC 3 cut(s) 253, 606, 717
BbvI GCAGC 3 cut(s) 356, 1464, 2092
BccI CCATC 7 cut(s) 46, 362, 914, 1151, 1859, 2132, 2303
BciVI GTATCC 1 cut(s) 1551
BclI TGATCA 1 cut(s) 1149
BcnI CCSGG 1 cut(s) 2240
BcoDI GTCTC 2 cut(s) 428, 2298
BfaI CTAG 1 cut(s) 495
BfmI CTRYAG 1 cut(s) 374
BfuI GTATCC 1 cut(s) 1551
BglII AGATCT 1 cut(s) 274
BisI GCNGC 3 cut(s) 345, 1453, 2106
BlsI GCNGC 3 cut(s) 346, 1454, 2107
BmcAI AGTACT 1 cut(s) 707
Bme1390I CCNGG 1 cut(s) 2240
Bme18I GGWCC 3 cut(s) 329, 853, 1894
BmgT120I GGNCC 3 cut(s) 329, 853, 1894
BmiI GGNNCC 4 cut(s) 855, 2189, 2261, 2314
BmrFI CCNGG 1 cut(s) 2240
BmrI ACTGGG 1 cut(s) 1765
BmsI GCATC 6 cut(s) 799, 1156, 1464, 1486, 1760, 1899
BmuI ACTGGG 1 cut(s) 1765
BpiI GAAGAC 1 cut(s) 1979
Bpu10I CCTNAGC 2 cut(s) 600, 2111
BpuEI CTTGAG 1 cut(s) 188
BpuMI CCSGG 1 cut(s) 2240
Bsa29I ATCGAT 1 cut(s) 1588
BsaAI YACGTR 1 cut(s) 254
BsaBI GATNNNNATC 1 cut(s) 1584
BsaHI GRCGYC 1 cut(s) 645
BsaI GGTCTC 1 cut(s) 428
BsaJI CCNNGG 2 cut(s) 1005, 2100
BsaWI WCCGGW 1 cut(s) 1356
BsaXI ACNNNNNCTCC 2 cut(s) 1778, 1808
Bsc4I CCNNNNNNNGG 6 cut(s) 368, 411, 589, 1613, 2115, 2239
Bse118I RCCGGY 2 cut(s) 1356, 2115
Bse1I ACTGG 5 cut(s) 207, 264, 451, 1607, 1771
Bse21I CCTNAGG 2 cut(s) 1200, 2276
Bse3DI GCAATG 3 cut(s) 845, 1356, 1729
Bse8I GATNNNNATC 1 cut(s) 1584
BseCI ATCGAT 1 cut(s) 1588
BseDI CCNNGG 2 cut(s) 1005, 2100
BseGI GGATG 6 cut(s) 94, 646, 814, 837, 1479, 2124
BseJI GATNNNNATC 1 cut(s) 1584
BseLI CCNNNNNNNGG 6 cut(s) 368, 411, 589, 1613, 2115, 2239
BseMI GCAATG 3 cut(s) 845, 1356, 1729
BseMII CTCAG 3 cut(s) 591, 1191, 2290
BseNI ACTGG 5 cut(s) 207, 264, 451, 1607, 1771
BseRI GAGGAG 3 cut(s) 62, 1655, 2096
BseSI GKGCMC 2 cut(s) 253, 717
BseXI GCAGC 3 cut(s) 356, 1464, 2092
BseYI CCCAGC 1 cut(s) 508
Bsh1236I CGCG 2 cut(s) 918, 1401
BshFI GGCC 3 cut(s) 450, 1205, 1418
BshTI ACCGGT 1 cut(s) 1356
BshVI ATCGAT 1 cut(s) 1588
BsiHKAI GWGCWC 3 cut(s) 253, 606, 717
BsiSI CCGG 5 cut(s) 1302, 1357, 1784, 2116, 2239
BslI CCNNNNNNNGG 6 cut(s) 368, 411, 589, 1613, 2115, 2239
BsmAI GTCTC 2 cut(s) 428, 2298
BsmBI CGTCTC 1 cut(s) 2298
BsmI GAATGC 2 cut(s) 1183, 1869
BsnI GGCC 3 cut(s) 450, 1205, 1418
Bso31I GGTCTC 1 cut(s) 428
Bsp1286I GDGCHC 4 cut(s) 253, 606, 717, 2190
Bsp1407I TGTACA 1 cut(s) 533
Bsp143I GATC 7 cut(s) 124, 274, 620, 1149, 1589, 1687, 1764
BspACI CCGC 7 cut(s) 484, 722, 1174, 1181, 1412, 1534, 1912
BspANI GGCC 3 cut(s) 450, 1205, 1418
BspCNI CTCAG 3 cut(s) 592, 1192, 2289
BspDI ATCGAT 1 cut(s) 1588
BspFNI CGCG 2 cut(s) 918, 1401
BspHI TCATGA 1 cut(s) 1761
BspLI GGNNCC 4 cut(s) 855, 2189, 2261, 2314
BspMAI CTGCAG 1 cut(s) 378
BspPI GGATC 3 cut(s) 132, 1584, 1695
BspTNI GGTCTC 1 cut(s) 428
BsrDI GCAATG 3 cut(s) 845, 1356, 1729
BsrFI RCCGGY 2 cut(s) 1356, 2115
BsrGI TGTACA 1 cut(s) 533
BsrI ACTGG 5 cut(s) 207, 264, 451, 1607, 1771
BssAI RCCGGY 2 cut(s) 1356, 2115
BssECI CCNNGG 2 cut(s) 1005, 2100
BssMI GATC 7 cut(s) 124, 274, 620, 1149, 1589, 1687, 1764
BssNI GRCGYC 1 cut(s) 645
BssSI CACGAG 1 cut(s) 333
BssT1I CCWWGG 2 cut(s) 1005, 2100
Bst2BI CACGAG 1 cut(s) 333
Bst6I CTCTTC 4 cut(s) 265, 298, 333, 1632
BstACI GRCGYC 1 cut(s) 645
BstAPI GCANNNNNTGC 1 cut(s) 1875
BstAUI TGTACA 1 cut(s) 533
BstBAI YACGTR 1 cut(s) 254
BstC8I GCNNGC 1 cut(s) 2019
BstDEI CTNAG 5 cut(s) 600, 617, 1200, 2111, 2276
BstF5I GGATG 6 cut(s) 94, 646, 814, 837, 1479, 2124
BstFNI CGCG 2 cut(s) 918, 1401
BstHHI GCGC 3 cut(s) 918, 1061, 2134
BstKTI GATC 7 cut(s) 127, 277, 623, 1152, 1592, 1690, 1767
BstMAI GTCTC 2 cut(s) 428, 2298
BstMBI GATC 7 cut(s) 124, 274, 620, 1149, 1589, 1687, 1764
BstMWI GCNNNNNNNGC 2 cut(s) 1510, 1875
BstNSI RCATGY 3 cut(s) 635, 1340, 1627
BstSCI CCNGG 1 cut(s) 2238
BstSFI CTRYAG 1 cut(s) 374
BstSLI GKGCMC 2 cut(s) 253, 717
BstUI CGCG 2 cut(s) 918, 1401
BstV1I GCAGC 3 cut(s) 356, 1464, 2092
BstV2I GAAGAC 1 cut(s) 1979
BstX2I RGATCY 2 cut(s) 124, 274
BstXI CCANNNNNNTGG 1 cut(s) 1439
BstYI RGATCY 2 cut(s) 124, 274
Bsu15I ATCGAT 1 cut(s) 1588
Bsu36I CCTNAGG 2 cut(s) 1200, 2276
BsuI GTATCC 1 cut(s) 1551
BsuRI GGCC 3 cut(s) 450, 1205, 1418
BsuTUI ATCGAT 1 cut(s) 1588
BtgZI GCGATG 2 cut(s) 933, 969
BtsCI GGATG 6 cut(s) 94, 646, 814, 837, 1479, 2124
Cac8I GCNNGC 1 cut(s) 2019
CciI TCATGA 1 cut(s) 1761
CfoI GCGC 3 cut(s) 918, 1061, 2134
Cfr10I RCCGGY 2 cut(s) 1356, 2115
Cfr13I GGNCC 3 cut(s) 329, 853, 1894
ClaI ATCGAT 1 cut(s) 1588
CseI GACGC 2 cut(s) 653, 1778
Csp6I GTAC 7 cut(s) 255, 534, 550, 706, 730, 1279, 1390
CspAI ACCGGT 1 cut(s) 1356
CviQI GTAC 7 cut(s) 255, 534, 550, 706, 730, 1279, 1390
DdeI CTNAG 5 cut(s) 600, 617, 1200, 2111, 2276
DpnI GATC 7 cut(s) 126, 276, 622, 1151, 1591, 1689, 1766
DpnII GATC 7 cut(s) 124, 274, 620, 1149, 1589, 1687, 1764
DraI TTTAAA 1 cut(s) 160
EaeI YGGCCR 1 cut(s) 448
Eam1104I CTCTTC 4 cut(s) 265, 298, 333, 1632
EarI CTCTTC 4 cut(s) 265, 298, 333, 1632
EciI GGCGGA 1 cut(s) 1427
Eco130I CCWWGG 2 cut(s) 1005, 2100
Eco147I AGGCCT 1 cut(s) 1418
Eco24I GRGCYC 1 cut(s) 2190
Eco31I GGTCTC 1 cut(s) 428
Eco47I GGWCC 3 cut(s) 329, 853, 1894
Eco81I CCTNAGG 2 cut(s) 1200, 2276
EcoO109I RGGNCCY 1 cut(s) 853
EcoRI GAATTC 1 cut(s) 563
EcoT14I CCWWGG 2 cut(s) 1005, 2100
EcoT22I ATGCAT 3 cut(s) 667, 777, 1479
EcoT38I GRGCYC 1 cut(s) 2190
ErhI CCWWGG 2 cut(s) 1005, 2100
Esp3I CGTCTC 1 cut(s) 2298
FauI CCCGC 3 cut(s) 491, 715, 1541
FbaI TGATCA 1 cut(s) 1149
Fnu4HI GCNGC 3 cut(s) 345, 1453, 2106
FokI GGATG 6 cut(s) 101, 653, 821, 844, 1486, 2111
FriOI GRGCYC 1 cut(s) 2190
Fsp4HI GCNGC 3 cut(s) 345, 1453, 2106
FspBI CTAG 1 cut(s) 495
FspI TGCGCA 2 cut(s) 1060, 2133
GlaI GCGC 3 cut(s) 917, 1060, 2133
GluI GCNGC 3 cut(s) 345, 1453, 2106
GsaI CCCAGC 1 cut(s) 512
HaeIII GGCC 3 cut(s) 450, 1205, 1418
HapII CCGG 5 cut(s) 1302, 1357, 1784, 2116, 2239
HgaI GACGC 2 cut(s) 653, 1778
HhaI GCGC 3 cut(s) 918, 1061, 2134
Hin1I GRCGYC 1 cut(s) 645
Hin6I GCGC 3 cut(s) 916, 1059, 2132
HinP1I GCGC 3 cut(s) 916, 1059, 2132
HincII GTYRAC 3 cut(s) 933, 1250, 2121
HindII GTYRAC 3 cut(s) 933, 1250, 2121
HinfI GANTC 6 cut(s) 244, 1325, 1564, 1703, 1859, 1928
HpaII CCGG 5 cut(s) 1302, 1357, 1784, 2116, 2239
HphI GGTGA 5 cut(s) 1108, 1111, 1172, 2042, 2264
Hpy188III TCNNGA 5 cut(s) 335, 495, 1427, 1762, 2206
Hpy99I CGWCG 1 cut(s) 1794
HpyAV CCTTC 9 cut(s) 68, 202, 346, 379, 667, 748, 1463, 1843, 2273
HpyCH4IV ACGT 3 cut(s) 253, 749, 1668
HpyF10VI GCNNNNNNNGC 2 cut(s) 1510, 1875
HpyF3I CTNAG 5 cut(s) 600, 617, 1200, 2111, 2276
HpySE526I ACGT 3 cut(s) 253, 749, 1668
Hsp92I GRCGYC 1 cut(s) 645
HspAI GCGC 3 cut(s) 916, 1059, 2132
Ksp22I TGATCA 1 cut(s) 1149
Kzo9I GATC 7 cut(s) 124, 274, 620, 1149, 1589, 1687, 1764
LmnI GCTCC 3 cut(s) 1786, 2193, 2265
Lsp1109I GCAGC 3 cut(s) 356, 1464, 2092
LweI GCATC 6 cut(s) 799, 1156, 1464, 1486, 1760, 1899
MaeI CTAG 1 cut(s) 495
MaeII ACGT 3 cut(s) 253, 749, 1668
MaeIII GTNAC 4 cut(s) 1183, 1427, 1828, 1880
MalI GATC 7 cut(s) 126, 276, 622, 1151, 1591, 1689, 1766
MboI GATC 7 cut(s) 124, 274, 620, 1149, 1589, 1687, 1764
MfeI CAATTG 1 cut(s) 1548
MflI RGATCY 2 cut(s) 124, 274
MhlI GDGCHC 4 cut(s) 253, 606, 717, 2190
MlsI TGGCCA 1 cut(s) 450
MluNI TGGCCA 1 cut(s) 450
MlyI GAGTC 2 cut(s) 1712, 1868
MmeI TCCRAC 5 cut(s) 467, 550, 721, 1341, 2340
Mox20I TGGCCA 1 cut(s) 450
Mph1103I ATGCAT 3 cut(s) 667, 777, 1479
MroXI GAANNNNTTC 1 cut(s) 1655
MscI TGGCCA 1 cut(s) 450
MseI TTAA 6 cut(s) 159, 1679, 1695, 1734, 1968, 2341
MslI CAYNNNNRTG 4 cut(s) 1121, 1462, 1622, 2196
Msp20I TGGCCA 1 cut(s) 450
MspI CCGG 5 cut(s) 1302, 1357, 1784, 2116, 2239
MspR9I CCNGG 1 cut(s) 2240
MunI CAATTG 1 cut(s) 1548
Mva1269I GAATGC 2 cut(s) 1183, 1869
MvnI CGCG 2 cut(s) 918, 1401
MwoI GCNNNNNNNGC 2 cut(s) 1510, 1875
NciI CCSGG 1 cut(s) 2240
NdeII GATC 7 cut(s) 124, 274, 620, 1149, 1589, 1687, 1764
NlaIV GGNNCC 4 cut(s) 855, 2189, 2261, 2314
NmuCI GTSAC 2 cut(s) 1427, 1880
NsbI TGCGCA 2 cut(s) 1060, 2133
NsiI ATGCAT 3 cut(s) 667, 777, 1479
NspI RCATGY 3 cut(s) 635, 1340, 1627
PagI TCATGA 1 cut(s) 1761
PceI AGGCCT 1 cut(s) 1418
PciI ACATGT 1 cut(s) 631
PcsI WCGNNNNNNNCGW 1 cut(s) 2313
PctI GAATGC 2 cut(s) 1183, 1869
PdmI GAANNNNTTC 1 cut(s) 1655
PfeI GAWTC 4 cut(s) 244, 1325, 1564, 1928
PflFI GACNNNGTC 2 cut(s) 1212, 1978
PflMI CCANNNNNTGG 2 cut(s) 589, 1613
PinAI ACCGGT 1 cut(s) 1356
PkrI GCNGC 3 cut(s) 346, 1454, 2107
PleI GAGTC 2 cut(s) 1711, 1867
PpsI GAGTC 2 cut(s) 1711, 1867
Ppu21I YACGTR 1 cut(s) 254
PpuMI RGGWCCY 1 cut(s) 853
PscI ACATGT 1 cut(s) 631
PsiI TTATAA 1 cut(s) 1092
Psp5II RGGWCCY 1 cut(s) 853
PspFI CCCAGC 1 cut(s) 508
PspN4I GGNNCC 4 cut(s) 855, 2189, 2261, 2314
PspPI GGNCC 3 cut(s) 329, 853, 1894
PspPPI RGGWCCY 1 cut(s) 853
PstI CTGCAG 1 cut(s) 378
PsuI RGATCY 2 cut(s) 124, 274
PsyI GACNNNGTC 2 cut(s) 1212, 1978
RsaI GTAC 7 cut(s) 256, 535, 551, 707, 731, 1280, 1391
RsaNI GTAC 7 cut(s) 255, 534, 550, 706, 730, 1279, 1390
RseI CAYNNNNRTG 4 cut(s) 1121, 1462, 1622, 2196
SaqAI TTAA 6 cut(s) 159, 1679, 1695, 1734, 1968, 2341
SatI GCNGC 3 cut(s) 345, 1453, 2106
Sau3AI GATC 7 cut(s) 124, 274, 620, 1149, 1589, 1687, 1764
Sau96I GGNCC 3 cut(s) 329, 853, 1894
ScaI AGTACT 1 cut(s) 707
SchI GAGTC 2 cut(s) 1712, 1868
ScrFI CCNGG 1 cut(s) 2240
SduI GDGCHC 4 cut(s) 253, 606, 717, 2190
SfaNI GCATC 6 cut(s) 799, 1156, 1464, 1486, 1760, 1899
SfcI CTRYAG 1 cut(s) 374
SinI GGWCC 3 cut(s) 329, 853, 1894
SmiMI CAYNNNNRTG 4 cut(s) 1121, 1462, 1622, 2196
SmlI CTYRAG 1 cut(s) 167
SmoI CTYRAG 1 cut(s) 167
SseBI AGGCCT 1 cut(s) 1418
SsiI CCGC 7 cut(s) 484, 722, 1174, 1181, 1412, 1534, 1912
SspMI CTAG 1 cut(s) 495
StuI AGGCCT 1 cut(s) 1418
StyD4I CCNGG 1 cut(s) 2238
StyI CCWWGG 2 cut(s) 1005, 2100
TaiI ACGT 3 cut(s) 256, 752, 1671
TaqI TCGA 7 cut(s) 287, 969, 1480, 1588, 1701, 1982, 2023
TaqII GACCGA 1 cut(s) 1882
TatI WGTACW 3 cut(s) 533, 549, 705
TfiI GAWTC 4 cut(s) 244, 1325, 1564, 1928
Tru1I TTAA 6 cut(s) 159, 1679, 1695, 1734, 1968, 2341
Tru9I TTAA 6 cut(s) 159, 1679, 1695, 1734, 1968, 2341
TseFI GTSAC 2 cut(s) 1427, 1880
TseI GCWGC 3 cut(s) 344, 1452, 2105
Tsp45I GTSAC 2 cut(s) 1427, 1880
TspGWI ACGGA 2 cut(s) 1576, 2117
Tth111I GACNNNGTC 2 cut(s) 1212, 1978
Van91I CCANNNNNTGG 2 cut(s) 589, 1613
VneI GTGCAC 2 cut(s) 249, 713
VpaK11BI GGWCC 3 cut(s) 329, 853, 1894
XapI RAATTY 6 cut(s) 182, 563, 835, 1655, 1697, 2054
XbaI TCTAGA 1 cut(s) 494
XceI RCATGY 3 cut(s) 635, 1340, 1627
XmnI GAANNNNTTC 1 cut(s) 1655
XspI CTAG 1 cut(s) 495
ZrmI AGTACT 1 cut(s) 707
Zsp2I ATGCAT 3 cut(s) 667, 777, 1479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.