Rorug03G0287500

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000074
Physical Location & Seq
Forward (+)
29206245 .. 29208053
1809 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0287500.1

Sequence Viewer

Length: 1809 bp
ATGATATCCCAAAATCAGGTTTCCATCGAATCCCTAGTTTACTTCTGGAATTTTTGGAAGGAAAAGATTGTTCTCGTGATTGAATGTCTAGGATGCCTTGAAACCCAAGGTGTTAATGTAAACAGAAGTTATCAAAAGTTTTGTTTAAACTACTTGGGAGTATGGAGGCTATCTAATCAAATGAATCCTGTGTACGTTTTACTCTTCCCTGATGCTGATTGGGTCAGAGATGTGGACAAAAGTTATTTCCAAAGTCATGGGAAGTTGGTCTCCATTGATGTTCGCCAGCTTATTTCAGCTGCTCAGAAATATTGGAGTTCAGAACTGCTTGCTGTAGGCATTAAGGTTTTGGAAAAGCTTGATGAGCTTTTCAAGTTCTCTATCCAGAGTTCTGATTCAACATTCTTCCAAAGCAGGGCTCTTACCTTCATCTATGATGTTGCGGTATATCTCCTGAATTCCAAATGTTTGAAGAGAAGGCCTCAAGATGCCAAGGCACTGCAGAAATTTGTAACTTTCTCAACTGAAAGGTTTGTTGCTTGCGTGTTTCCTTTAGATTGGAGGAAATCATTTAGAGAGAATATGATTTCTCTTAGAAGAACTGATGCTTCAAAGAATGTACTTAATCAAGTTATAGTTGAATACATCAGCTCAAAGAACGAGCTGTCTTATGGTCAAATTGGAAGGATCGCAATGACCATTCTCGGGTCTGGTATGCTGAATTTTGAACTATGTAAGAAGCTTGTGAAGAAGTTGGACTCCAATCCACCATGGAAGGACTTTATTGAGAACCTATGTGCGAGTACTGAAGCTGGAAATACCAGTCAGAAGCCTAGAGAGGTGTCTGTTATGTGGCTATTATCTGAGGCTTTAGTTGAAACTTATAATGCAAACTGGAGGGTTGTTAAAGACTACATATCACCTGGTTGCTTCTTGTATCTTGTGGAGCGTCTTCTGATTTGGGCTTCTCAATGTCGAGGTTATGTTATCACCACAAGTTCTTGTTTCACTGAATGGCTGATGTACCAGGATGAAGATACTCATGTGCAACCATCTATAGAAGGCATCCTTCATTTTGTTAGTAATGTGGTTACCGAATGCCTTTGTAACAAGGCAAATCTGATTGAATGGATTAGAAAGTCTAATGCAGATTGGAAGACCTGTTATTCACTACTCGTGCCAAGATTGGTCTTTCTACTATGTTTGCTTTGTGTGAACTTTGGAATATGCTTGGATGTACTCTCTGATGTGCTGGGAAGGAGCTATATCACTGAACAACTTCCATGTGAATTTCACGACACCCTTAAGAGGCGGAGGAGGAACAATTTTCTGAATATAAATGTGGAAGTGCTTGCAGCAGCTCTCAAGAAGATTCACAATACTTTGGTAATTGCTAGTTTTGGGTTTGATTGTTCAAGGTTCGTATGCCCAGATGCCATCTTTGTTGACATGAAGGCCATTCAGTCCAAGGATGACCTATTCAGAATAATGTTTCCTAAACCACCAGTCATTCAAGTTGCACCAGGTCGAATTGGATTTGTTGAAGCTGGAGGTAATACTCTTTGTGGTGGTGTACTTTCTGCAAATGATATCGATGCAGGGAAGAGCTCTTTAAACTCCAACTTGGTGGGAGAAACTGATGAGCAGTTTGATGCTGAAGACGGTCAGAGTAGAAGTGAGGAAATCTGCAAAGCCAATGTGTCTACACCAATGTGTCCACAACCTGATGCAGTCTCGGCTTCTACTTCTGCAACCCAAGCAAACAAAAAGGGCAACCGCAAGAATAATACTAAGAAAAATAAGGCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

602

Amino Acids

68.29

Weight (kDa)

8.33

Isoelectric Point (pI)

41.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 885
AccI GTMKAC 1 cut(s) 1703
AciI CCGC 3 cut(s) 443, 1312, 1777
AclWI GGATC 1 cut(s) 695
AcsI RAATTY 5 cut(s) 49, 457, 506, 721, 1289
AcuI CTGAAG 2 cut(s) 828, 1677
AfaI GTAC 6 cut(s) 194, 621, 805, 1025, 1239, 1575
AfiI CCNNNNNNNGG 4 cut(s) 16, 415, 705, 1308
AflII CTTAAG 1 cut(s) 1304
AjnI CCWGG 3 cut(s) 922, 1026, 1522
AleI CACNNNNGTG 1 cut(s) 1711
Alw21I GWGCWC 1 cut(s) 1610
Alw26I GTCTC 2 cut(s) 274, 1738
AlwI GGATC 1 cut(s) 695
Ama87I CYCGRG 1 cut(s) 704
AoxI GGCC 2 cut(s) 479, 1455
ApeKI GCWGC 3 cut(s) 299, 1355, 1358
ApoI RAATTY 5 cut(s) 49, 457, 506, 721, 1289
Asp700I GAANNNNTTC 1 cut(s) 1278
AsuHPI GGTGA 2 cut(s) 912, 982
AvaI CYCGRG 1 cut(s) 704
BaeI ACNNNNGTAYC 2 cut(s) 1029, 1062
BanII GRGCYC 2 cut(s) 421, 1610
BauI CACGAG 2 cut(s) 74, 1175
BbsI GAAGAC 3 cut(s) 944, 1163, 1665
Bbv12I GWGCWC 1 cut(s) 1610
BbvI GCAGC 3 cut(s) 286, 1367, 1370
BccI CCATC 3 cut(s) 32, 1060, 1445
BciT130I CCWGG 3 cut(s) 924, 1028, 1524
BcoDI GTCTC 2 cut(s) 274, 1738
BfaI CTAG 4 cut(s) 35, 89, 834, 1395
BfmI CTRYAG 3 cut(s) 333, 500, 1056
BfrI CTTAAG 1 cut(s) 1304
BisI GCNGC 3 cut(s) 300, 1356, 1359
BlsI GCNGC 3 cut(s) 301, 1357, 1360
BmcAI AGTACT 1 cut(s) 805
Bme1390I CCNGG 3 cut(s) 924, 1028, 1524
BmeT110I CYCGRG 1 cut(s) 704
BmrFI CCNGG 3 cut(s) 924, 1028, 1524
BmsI GCATC 9 cut(s) 83, 202, 478, 595, 1074, 1423, 1585, 1642, 1717
BpiI GAAGAC 3 cut(s) 944, 1163, 1665
BplI GAGNNNNNCTC 2 cut(s) 466, 498
BpmI CTGGAG 2 cut(s) 916, 1569
BpuEI CTTGAG 2 cut(s) 468, 1349
Bsa29I ATCGAT 1 cut(s) 1593
BsaI GGTCTC 1 cut(s) 274
BsaJI CCNNGG 4 cut(s) 106, 492, 770, 1467
Bsc4I CCNNNNNNNGG 4 cut(s) 16, 415, 705, 1308
Bse1I ACTGG 3 cut(s) 822, 899, 1505
Bse3DI GCAATG 1 cut(s) 699
BseBI CCWGG 3 cut(s) 924, 1028, 1524
BseCI ATCGAT 1 cut(s) 1593
BseDI CCNNGG 4 cut(s) 106, 492, 770, 1467
BseGI GGATG 5 cut(s) 98, 1036, 1065, 1240, 1477
BseLI CCNNNNNNNGG 4 cut(s) 16, 415, 705, 1308
BseMI GCAATG 1 cut(s) 699
BseMII CTCAG 2 cut(s) 317, 855
BseNI ACTGG 3 cut(s) 822, 899, 1505
BseRI GAGGAG 1 cut(s) 1330
BseXI GCAGC 3 cut(s) 286, 1367, 1370
BseYI CCCAGC 1 cut(s) 1252
BshFI GGCC 2 cut(s) 481, 1457
BshVI ATCGAT 1 cut(s) 1593
BsiHKAI GWGCWC 1 cut(s) 1610
BsiHKCI CYCGRG 1 cut(s) 704
BslI CCNNNNNNNGG 4 cut(s) 16, 415, 705, 1308
BsmAI GTCTC 2 cut(s) 274, 1738
BsmI GAATGC 1 cut(s) 1103
BsnI GGCC 2 cut(s) 481, 1457
Bso31I GGTCTC 1 cut(s) 274
BsoBI CYCGRG 1 cut(s) 704
Bsp1286I GDGCHC 2 cut(s) 421, 1610
Bsp143I GATC 1 cut(s) 687
Bsp19I CCATGG 1 cut(s) 770
BspACI CCGC 3 cut(s) 443, 1312, 1777
BspANI GGCC 2 cut(s) 481, 1457
BspCNI CTCAG 2 cut(s) 316, 856
BspDI ATCGAT 1 cut(s) 1593
BspMAI CTGCAG 1 cut(s) 504
BspPI GGATC 1 cut(s) 695
BspQI GCTCTTC 1 cut(s) 1598
BspTI CTTAAG 1 cut(s) 1304
BspTNI GGTCTC 1 cut(s) 274
BsrDI GCAATG 1 cut(s) 699
BsrI ACTGG 3 cut(s) 822, 899, 1505
BssECI CCNNGG 4 cut(s) 106, 492, 770, 1467
BssMI GATC 1 cut(s) 687
BssSI CACGAG 2 cut(s) 74, 1175
BssT1I CCWWGG 4 cut(s) 106, 492, 770, 1467
Bst2BI CACGAG 2 cut(s) 74, 1175
Bst2UI CCWGG 3 cut(s) 924, 1028, 1524
Bst4CI ACNGT 1 cut(s) 1664
Bst6I CTCTTC 3 cut(s) 209, 467, 1598
BstAFI CTTAAG 1 cut(s) 1304
BstC8I GCNNGC 4 cut(s) 287, 330, 541, 1353
BstDEI CTNAG 4 cut(s) 303, 593, 864, 1791
BstDSI CCRYGG 1 cut(s) 770
BstEII GGTNACC 1 cut(s) 1090
BstF5I GGATG 5 cut(s) 98, 1036, 1065, 1240, 1477
BstKTI GATC 1 cut(s) 690
BstMAI GTCTC 2 cut(s) 274, 1738
BstMBI GATC 1 cut(s) 687
BstMWI GCNNNNNNNGC 3 cut(s) 364, 1736, 1757
BstNI CCWGG 3 cut(s) 924, 1028, 1524
BstPI GGTNACC 1 cut(s) 1090
BstSCI CCNGG 3 cut(s) 922, 1026, 1522
BstSFI CTRYAG 3 cut(s) 333, 500, 1056
BstV1I GCAGC 3 cut(s) 286, 1367, 1370
BstV2I GAAGAC 3 cut(s) 944, 1163, 1665
BstXI CCANNNNNNTGG 2 cut(s) 257, 1627
Bsu15I ATCGAT 1 cut(s) 1593
BsuRI GGCC 2 cut(s) 481, 1457
BsuTUI ATCGAT 1 cut(s) 1593
BtgI CCRYGG 1 cut(s) 770
BtsCI GGATG 5 cut(s) 98, 1036, 1065, 1240, 1477
BtsI GCAGTG 1 cut(s) 497
BtsIMutI CAGTG 3 cut(s) 497, 1008, 1269
Cac8I GCNNGC 4 cut(s) 287, 330, 541, 1353
ClaI ATCGAT 1 cut(s) 1593
CseI GACGC 1 cut(s) 938
CsiI ACCWGGT 2 cut(s) 922, 1522
Csp6I GTAC 6 cut(s) 193, 620, 804, 1024, 1238, 1574
CviAII CATG 5 cut(s) 257, 771, 1043, 1284, 1450
CviQI GTAC 6 cut(s) 193, 620, 804, 1024, 1238, 1574
DdeI CTNAG 4 cut(s) 303, 593, 864, 1791
DpnI GATC 1 cut(s) 689
DpnII GATC 1 cut(s) 687
DraI TTTAAA 2 cut(s) 147, 1614
Eam1104I CTCTTC 3 cut(s) 209, 467, 1598
EarI CTCTTC 3 cut(s) 209, 467, 1598
EciI GGCGGA 1 cut(s) 1327
Ecl136II GAGCTC 1 cut(s) 1608
Eco130I CCWWGG 4 cut(s) 106, 492, 770, 1467
Eco147I AGGCCT 1 cut(s) 481
Eco24I GRGCYC 2 cut(s) 421, 1610
Eco31I GGTCTC 1 cut(s) 274
Eco32I GATATC 2 cut(s) 6, 1591
Eco53kI GAGCTC 1 cut(s) 1608
Eco57I CTGAAG 2 cut(s) 828, 1677
Eco88I CYCGRG 1 cut(s) 704
Eco91I GGTNACC 1 cut(s) 1090
EcoICRI GAGCTC 1 cut(s) 1608
EcoO65I GGTNACC 1 cut(s) 1090
EcoRI GAATTC 1 cut(s) 457
EcoRII CCWGG 3 cut(s) 922, 1026, 1522
EcoRV GATATC 2 cut(s) 6, 1591
EcoT14I CCWWGG 4 cut(s) 106, 492, 770, 1467
EcoT38I GRGCYC 2 cut(s) 421, 1610
ErhI CCWWGG 4 cut(s) 106, 492, 770, 1467
FaeI CATG 5 cut(s) 260, 774, 1046, 1287, 1453
FalI AAGNNNNNCTT 2 cut(s) 1053, 1085
FatI CATG 5 cut(s) 256, 770, 1042, 1283, 1449
FblI GTMKAC 1 cut(s) 1703
Fnu4HI GCNGC 3 cut(s) 300, 1356, 1359
FokI GGATG 5 cut(s) 105, 1043, 1052, 1247, 1484
FriOI GRGCYC 2 cut(s) 421, 1610
Fsp4HI GCNGC 3 cut(s) 300, 1356, 1359
FspBI CTAG 4 cut(s) 35, 89, 834, 1395
GluI GCNGC 3 cut(s) 300, 1356, 1359
GsaI CCCAGC 1 cut(s) 1256
GsuI CTGGAG 2 cut(s) 916, 1569
HaeIII GGCC 2 cut(s) 481, 1457
HgaI GACGC 1 cut(s) 938
Hin1II CATG 5 cut(s) 260, 774, 1046, 1287, 1453
HincII GTYRAC 1 cut(s) 1447
HindII GTYRAC 1 cut(s) 1447
HindIII AAGCTT 2 cut(s) 356, 740
HinfI GANTC 5 cut(s) 29, 184, 395, 758, 1372
HphI GGTGA 2 cut(s) 912, 982
Hpy166II GTNNAC 9 cut(s) 40, 121, 193, 235, 1216, 1447, 1574, 1704, 1718
Hpy188III TCNNGA 7 cut(s) 46, 76, 385, 454, 485, 1295, 1366
Hpy8I GTNNAC 9 cut(s) 40, 121, 193, 235, 1216, 1447, 1574, 1704, 1718
HpyAV CCTTC 9 cut(s) 52, 436, 471, 678, 769, 1055, 1079, 1251, 1447
HpyCH4III ACNGT 1 cut(s) 1664
HpyCH4IV ACGT 1 cut(s) 195
HpyF10VI GCNNNNNNNGC 3 cut(s) 364, 1736, 1757
HpyF3I CTNAG 4 cut(s) 303, 593, 864, 1791
HpySE526I ACGT 1 cut(s) 195
Hsp92II CATG 5 cut(s) 260, 774, 1046, 1287, 1453
Kzo9I GATC 1 cut(s) 687
LguI GCTCTTC 1 cut(s) 1598
LmnI GCTCC 2 cut(s) 946, 1260
Lsp1109I GCAGC 3 cut(s) 286, 1367, 1370
LweI GCATC 9 cut(s) 83, 202, 478, 595, 1074, 1423, 1585, 1642, 1717
MabI ACCWGGT 2 cut(s) 922, 1522
MaeI CTAG 4 cut(s) 35, 89, 834, 1395
MaeII ACGT 1 cut(s) 195
MaeIII GTNAC 3 cut(s) 511, 1090, 1106
MalI GATC 1 cut(s) 689
MboI GATC 1 cut(s) 687
MhlI GDGCHC 2 cut(s) 421, 1610
MluCI AATT 9 cut(s) 49, 457, 506, 678, 721, 1289, 1324, 1389, 1530
MlyI GAGTC 1 cut(s) 752
MmeI TCCRAC 2 cut(s) 735, 1644
MroXI GAANNNNTTC 1 cut(s) 1278
MseI TTAA 7 cut(s) 114, 146, 342, 624, 906, 1305, 1613
MslI CAYNNNNRTG 1 cut(s) 1711
MspA1I CMGCKG 1 cut(s) 299
MspCI CTTAAG 1 cut(s) 1304
MspR9I CCNGG 3 cut(s) 924, 1028, 1524
MssI GTTTAAAC 1 cut(s) 147
Mva1269I GAATGC 1 cut(s) 1103
MvaI CCWGG 3 cut(s) 924, 1028, 1524
MwoI GCNNNNNNNGC 3 cut(s) 364, 1736, 1757
NcoI CCATGG 1 cut(s) 770
NdeII GATC 1 cut(s) 687
NlaIII CATG 5 cut(s) 260, 774, 1046, 1287, 1453
NmeAIII GCCGAG 1 cut(s) 1715
OliI CACNNNNGTG 1 cut(s) 1711
PceI AGGCCT 1 cut(s) 481
PciSI GCTCTTC 1 cut(s) 1598
PctI GAATGC 1 cut(s) 1103
PdmI GAANNNNTTC 1 cut(s) 1278
PfeI GAWTC 4 cut(s) 29, 184, 395, 1372
PkrI GCNGC 3 cut(s) 301, 1357, 1360
PleI GAGTC 1 cut(s) 752
PmeI GTTTAAAC 1 cut(s) 147
PpsI GAGTC 1 cut(s) 752
PsiI TTATAA 1 cut(s) 885
Psp124BI GAGCTC 1 cut(s) 1610
Psp6I CCWGG 3 cut(s) 922, 1026, 1522
PspEI GGTNACC 1 cut(s) 1090
PspFI CCCAGC 1 cut(s) 1252
PspGI CCWGG 3 cut(s) 922, 1026, 1522
PstI CTGCAG 1 cut(s) 504
PvuII CAGCTG 1 cut(s) 299
RsaI GTAC 6 cut(s) 194, 621, 805, 1025, 1239, 1575
RsaNI GTAC 6 cut(s) 193, 620, 804, 1024, 1238, 1574
RseI CAYNNNNRTG 1 cut(s) 1711
SacI GAGCTC 1 cut(s) 1610
SapI GCTCTTC 1 cut(s) 1598
SaqAI TTAA 7 cut(s) 114, 146, 342, 624, 906, 1305, 1613
SatI GCNGC 3 cut(s) 300, 1356, 1359
Sau3AI GATC 1 cut(s) 687
ScaI AGTACT 1 cut(s) 805
SchI GAGTC 1 cut(s) 752
ScrFI CCNGG 3 cut(s) 924, 1028, 1524
SduI GDGCHC 2 cut(s) 421, 1610
SexAI ACCWGGT 2 cut(s) 922, 1522
SfaNI GCATC 9 cut(s) 83, 202, 478, 595, 1074, 1423, 1585, 1642, 1717
SfcI CTRYAG 3 cut(s) 333, 500, 1056
SmiMI CAYNNNNRTG 1 cut(s) 1711
SmlI CTYRAG 3 cut(s) 483, 1304, 1364
SmoI CTYRAG 3 cut(s) 483, 1304, 1364
Sse9I AATT 9 cut(s) 49, 457, 506, 678, 721, 1289, 1324, 1389, 1530
SseBI AGGCCT 1 cut(s) 481
SsiI CCGC 3 cut(s) 443, 1312, 1777
SspI AATATT 1 cut(s) 311
SspMI CTAG 4 cut(s) 35, 89, 834, 1395
SstI GAGCTC 1 cut(s) 1610
StuI AGGCCT 1 cut(s) 481
StyD4I CCNGG 3 cut(s) 922, 1026, 1522
StyI CCWWGG 4 cut(s) 106, 492, 770, 1467
TaaI ACNGT 1 cut(s) 1664
TaiI ACGT 1 cut(s) 198
TaqI TCGA 4 cut(s) 27, 976, 1528, 1593
TasI AATT 9 cut(s) 49, 457, 506, 678, 721, 1289, 1324, 1389, 1530
TatI WGTACW 4 cut(s) 619, 803, 1237, 1573
TfiI GAWTC 4 cut(s) 29, 184, 395, 1372
Tru1I TTAA 7 cut(s) 114, 146, 342, 624, 906, 1305, 1613
Tru9I TTAA 7 cut(s) 114, 146, 342, 624, 906, 1305, 1613
TscAI CASTG 3 cut(s) 504, 1015, 1276
TseI GCWGC 3 cut(s) 299, 1355, 1358
TspDTI ATGAA 5 cut(s) 197, 418, 1047, 1061, 1466
TspRI CASTG 3 cut(s) 504, 1015, 1276
Vha464I CTTAAG 1 cut(s) 1304
XapI RAATTY 5 cut(s) 49, 457, 506, 721, 1289
XmiI GTMKAC 1 cut(s) 1703
XmnI GAANNNNTTC 1 cut(s) 1278
XspI CTAG 4 cut(s) 35, 89, 834, 1395
ZrmI AGTACT 1 cut(s) 805
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.