Rh6AG315200

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0000074
Physical Location & Seq
Reverse (-)
51377893 .. 51381005
3113 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG315200.1

Sequence Viewer

Length: 1485 bp
ATGGACTTGAACAGTGAACAACGAGCCGGGTTAGAAGATTATGTTGAGGAGATGGAAGAAACATATTTGTCAGAAGGTGTTGAAATGGATGATTGCACACATTACAGAGGGAAGCCCTATAAGGATCTGACATTGGAGGATTTGAATGGCGTTGAGTTTAAAACCCTTGAGGAAGTGGAAAAATGCTACTCGTATTATTCACTGGCGAAGGGGTTTAGCATGAGGAAGTGTAGGCTGGACAAGAATCGTGCACGTACACTGGTCATTAGAAGAGATCTTGTTTGCTCGAAGCAAGGTATGAGAAGAGAGAGTGGCAAGAAAGATAGTGGTCCTCGTGAAGAGGCAACTTTGAAGGAATATCCTTATGATGGACTGCAGAATGTGAAGGAGAAGCATGGCATGACCAATCGGAGGTCAGTTGGGAATAATAGTGAGACCAATCCAACTGGCCACAACTCTAACAAGAAACTTCGCAGAAACACCCGCCGAATATCTAGAGGAAATTGCCCAGCAAGGGATCAGATTAAATTCGAGTCAAAGTTTGTTGTCGGCAATGTAGATGTTAATATAGAAACAGGTGCATCATTGTTCATGATCTCCCAGTATGAAAAGCCGGAGCGTCGGTGGATTGTGTCCTGCAACAACAATGAAAAGAATGTAACCTTCCTTTGTTCATGCCAACTTTTTGAGTCTGATGGCATTCCATGCTGTCACATTTTTTCGGTCCTCAAATATCAGATGCGGACAACATTCCCAGATTCCCTTGTGAAACAAAGGTGGACAAAGGAAGCCACTGTTAAGAAGACTTTGTCGAGTTTGGGATTGGAGAATGATAATTCTGTTCAGCTTGCTCGATATGGTGATTTGATGTCAGCTTGTGCTAAATTTTGTCATCTTGCTTCTTTTAGCGAGGAGGGGTATGAAGAAACCAAGGCTGCCCTTAGCCGGTTGACCATCCGTGCGCAGAAATACCGTGTTCCAAACCAGAATACCGTTCAATTTGATAGTTGTGAGGGGCTCCACCCCAATGTCATCAAGGATCCTATTGTGTGTAAGAGTAAAAGGAGTAAATCTAAGACATGCTGGGATAAGAAAAAAAAGGGAGGTAAATGTGGAGTTTGTAAAAAGACAGGACACAACCAGCGAACTTGTGGTGGGGGAAATGGTAAGGGTAAAAAAGGAGGTGTTGACAAAGCTAAATACCCCTTAGCAACAGAGGGTGTTTCGGATATAATTGAATCAAATAGCAGTGATGGTGATGCTTCCTTCAGTGAGATGGATGAAAGCAATGATTCCAATGAGGATGACTATAAAGACGGCGTCGTGAATCAAAGCCAGGCCACAAGTTTGATTCATCACCTTGAAGAATCCCGCCGTTTTGAGTTCTTTTCCGGGTATGACGAAAGTGGAACAGGCGGTTCTAAGACCAACAGTAAACCGTATCCAAACTTCTTTGAGCATTTTAGTCCCTTCCCAGATACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

494

Amino Acids

55.89

Weight (kDa)

8.39

Isoelectric Point (pI)

46.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 63 - 116 1.7e-06 FAR1 DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 963
AciI CCGC 4 cut(s) 484, 742, 1372, 1416
AclWI GGATC 4 cut(s) 132, 525, 1034, 1047
AcoI YGGCCR 1 cut(s) 448
AcsI RAATTY 2 cut(s) 527, 884
AcuI CTGAAG 1 cut(s) 1252
AcyI GRCGYC 1 cut(s) 1320
AfaI GTAC 1 cut(s) 256
AfiI CCNNNNNNNGG 4 cut(s) 368, 411, 514, 945
AgsI TTSAA 7 cut(s) 10, 83, 145, 352, 998, 1238, 1364
AjnI CCWGG 1 cut(s) 1335
AluBI AGCT 3 cut(s) 847, 875, 1196
AluI AGCT 3 cut(s) 847, 875, 1196
Alw21I GWGCWC 1 cut(s) 253
Alw26I GTCTC 1 cut(s) 428
Alw44I GTGCAC 1 cut(s) 249
AlwI GGATC 4 cut(s) 132, 525, 1034, 1047
AoxI GGCC 2 cut(s) 448, 1338
ApaLI GTGCAC 1 cut(s) 249
ApeKI GCWGC 1 cut(s) 935
ApoI RAATTY 2 cut(s) 527, 884
AspLEI GCGC 1 cut(s) 964
AspS9I GGNCC 2 cut(s) 329, 724
AsuC2I CCSGG 2 cut(s) 28, 1393
AsuHPI GGTGA 3 cut(s) 872, 1268, 1349
AvaII GGWCC 2 cut(s) 329, 724
BaeGI GKGCMC 1 cut(s) 253
BalI TGGCCA 1 cut(s) 450
BamHI GGATCC 1 cut(s) 1039
BanII GRGCYC 1 cut(s) 1020
BarI GAAGNNNNNNTAC 2 cut(s) 1433, 1465
BauI CACGAG 1 cut(s) 333
BbsI GAAGAC 1 cut(s) 809
Bbv12I GWGCWC 1 cut(s) 253
BbvI GCAGC 1 cut(s) 922
BccI CCATC 6 cut(s) 46, 362, 689, 962, 1247, 1270
BceAI ACGGC 2 cut(s) 1333, 1359
BciT130I CCWGG 1 cut(s) 1337
BciVI GTATCC 1 cut(s) 1452
BcnI CCSGG 2 cut(s) 28, 1393
BcoDI GTCTC 1 cut(s) 428
BfaI CTAG 1 cut(s) 495
BfmI CTRYAG 1 cut(s) 374
BfuI GTATCC 1 cut(s) 1452
BglII AGATCT 1 cut(s) 274
BisI GCNGC 1 cut(s) 936
BlsI GCNGC 1 cut(s) 937
Bme1390I CCNGG 3 cut(s) 28, 1337, 1393
Bme18I GGWCC 2 cut(s) 329, 724
BmgT120I GGNCC 2 cut(s) 329, 724
BmiI GGNNCC 2 cut(s) 1019, 1041
BmrFI CCNGG 3 cut(s) 28, 1337, 1393
BmrI ACTGGG 1 cut(s) 595
BmsI GCATC 3 cut(s) 590, 729, 1249
BmuI ACTGGG 1 cut(s) 595
BpiI GAAGAC 1 cut(s) 809
Bpu10I CCTNAGC 2 cut(s) 941, 1207
BpuEI CTTGAG 1 cut(s) 188
BpuMI CCSGG 2 cut(s) 28, 1393
BsaAI YACGTR 1 cut(s) 254
BsaHI GRCGYC 1 cut(s) 1320
BsaI GGTCTC 1 cut(s) 428
BsaJI CCNNGG 1 cut(s) 930
BsaXI ACNNNNNCTCC 2 cut(s) 608, 638
Bsc4I CCNNNNNNNGG 4 cut(s) 368, 411, 514, 945
Bse118I RCCGGY 1 cut(s) 945
Bse1I ACTGG 4 cut(s) 207, 264, 451, 601
Bse3DI GCAATG 2 cut(s) 559, 1294
BseBI CCWGG 1 cut(s) 1337
BseDI CCNNGG 1 cut(s) 930
BseGI GGATG 4 cut(s) 94, 954, 1285, 1309
BseLI CCNNNNNNNGG 4 cut(s) 368, 411, 514, 945
BseMI GCAATG 2 cut(s) 559, 1294
BseNI ACTGG 4 cut(s) 207, 264, 451, 601
BseRI GAGGAG 2 cut(s) 62, 926
BseSI GKGCMC 1 cut(s) 253
BseXI GCAGC 1 cut(s) 922
BseYI CCCAGC 2 cut(s) 508, 1083
BshFI GGCC 2 cut(s) 450, 1340
BsiHKAI GWGCWC 1 cut(s) 253
BsiSI CCGG 4 cut(s) 27, 614, 946, 1392
BslFI GGGAC 1 cut(s) 1452
BslI CCNNNNNNNGG 4 cut(s) 368, 411, 514, 945
BsmAI GTCTC 1 cut(s) 428
BsmFI GGGAC 1 cut(s) 1452
BsmI GAATGC 1 cut(s) 699
BsnI GGCC 2 cut(s) 450, 1340
Bso31I GGTCTC 1 cut(s) 428
Bsp1286I GDGCHC 2 cut(s) 253, 1020
Bsp143I GATC 5 cut(s) 124, 274, 517, 594, 1039
BspACI CCGC 4 cut(s) 484, 742, 1372, 1416
BspANI GGCC 2 cut(s) 450, 1340
BspHI TCATGA 1 cut(s) 591
BspLI GGNNCC 2 cut(s) 1019, 1041
BspMAI CTGCAG 1 cut(s) 378
BspPI GGATC 4 cut(s) 132, 525, 1034, 1047
BspTNI GGTCTC 1 cut(s) 428
BsrDI GCAATG 2 cut(s) 559, 1294
BsrFI RCCGGY 1 cut(s) 945
BsrI ACTGG 4 cut(s) 207, 264, 451, 601
BssAI RCCGGY 1 cut(s) 945
BssECI CCNNGG 1 cut(s) 930
BssMI GATC 5 cut(s) 124, 274, 517, 594, 1039
BssNI GRCGYC 1 cut(s) 1320
BssSI CACGAG 1 cut(s) 333
BssT1I CCWWGG 1 cut(s) 930
Bst2BI CACGAG 1 cut(s) 333
Bst2UI CCWGG 1 cut(s) 1337
Bst4CI ACNGT 6 cut(s) 14, 796, 974, 994, 1433, 1440
Bst6I CTCTTC 3 cut(s) 265, 298, 333
BstACI GRCGYC 1 cut(s) 1320
BstAPI GCANNNNNTGC 1 cut(s) 705
BstBAI YACGTR 1 cut(s) 254
BstC8I GCNNGC 1 cut(s) 849
BstDEI CTNAG 4 cut(s) 941, 1074, 1207, 1422
BstF5I GGATG 4 cut(s) 94, 954, 1285, 1309
BstHHI GCGC 1 cut(s) 964
BstKTI GATC 5 cut(s) 127, 277, 520, 597, 1042
BstMAI GTCTC 1 cut(s) 428
BstMBI GATC 5 cut(s) 124, 274, 517, 594, 1039
BstMWI GCNNNNNNNGC 1 cut(s) 705
BstNI CCWGG 1 cut(s) 1337
BstNSI RCATGY 1 cut(s) 1083
BstSCI CCNGG 3 cut(s) 26, 1335, 1391
BstSFI CTRYAG 1 cut(s) 374
BstSLI GKGCMC 1 cut(s) 253
BstV1I GCAGC 1 cut(s) 922
BstV2I GAAGAC 1 cut(s) 809
BstX2I RGATCY 3 cut(s) 124, 274, 1039
BstYI RGATCY 3 cut(s) 124, 274, 1039
BsuI GTATCC 1 cut(s) 1452
BsuRI GGCC 2 cut(s) 450, 1340
BtsCI GGATG 4 cut(s) 94, 954, 1285, 1309
BtsI GCAGTG 1 cut(s) 1255
BtsIMutI CAGTG 6 cut(s) 19, 200, 257, 792, 1255, 1276
Cac8I GCNNGC 1 cut(s) 849
CciI TCATGA 1 cut(s) 591
CfoI GCGC 1 cut(s) 964
Cfr10I RCCGGY 1 cut(s) 945
Cfr13I GGNCC 2 cut(s) 329, 724
CseI GACGC 2 cut(s) 608, 1309
Csp6I GTAC 1 cut(s) 255
CviAII CATG 8 cut(s) 220, 395, 400, 592, 675, 705, 1080, 1482
CviQI GTAC 1 cut(s) 255
DdeI CTNAG 4 cut(s) 941, 1074, 1207, 1422
DpnI GATC 5 cut(s) 126, 276, 519, 596, 1041
DpnII GATC 5 cut(s) 124, 274, 517, 594, 1039
DraI TTTAAA 1 cut(s) 160
EaeI YGGCCR 1 cut(s) 448
Eam1104I CTCTTC 3 cut(s) 265, 298, 333
EarI CTCTTC 3 cut(s) 265, 298, 333
Eco130I CCWWGG 1 cut(s) 930
Eco24I GRGCYC 1 cut(s) 1020
Eco31I GGTCTC 1 cut(s) 428
Eco47I GGWCC 2 cut(s) 329, 724
Eco57I CTGAAG 1 cut(s) 1252
EcoRII CCWGG 1 cut(s) 1335
EcoT14I CCWWGG 1 cut(s) 930
EcoT38I GRGCYC 1 cut(s) 1020
ErhI CCWWGG 1 cut(s) 930
FaeI CATG 8 cut(s) 223, 398, 403, 595, 678, 708, 1083, 1485
FaqI GGGAC 1 cut(s) 1452
FatI CATG 8 cut(s) 219, 394, 399, 591, 674, 704, 1079, 1481
FauI CCCGC 2 cut(s) 491, 1379
Fnu4HI GCNGC 1 cut(s) 936
FokI GGATG 4 cut(s) 101, 941, 1292, 1316
FriOI GRGCYC 1 cut(s) 1020
Fsp4HI GCNGC 1 cut(s) 936
FspBI CTAG 1 cut(s) 495
FspI TGCGCA 1 cut(s) 963
GlaI GCGC 1 cut(s) 963
GluI GCNGC 1 cut(s) 936
GsaI CCCAGC 2 cut(s) 512, 1087
HaeIII GGCC 2 cut(s) 450, 1340
HapII CCGG 4 cut(s) 27, 614, 946, 1392
HgaI GACGC 2 cut(s) 608, 1309
HhaI GCGC 1 cut(s) 964
Hin1I GRCGYC 1 cut(s) 1320
Hin1II CATG 8 cut(s) 223, 398, 403, 595, 678, 708, 1083, 1485
Hin6I GCGC 1 cut(s) 962
HinP1I GCGC 1 cut(s) 962
HincII GTYRAC 2 cut(s) 951, 1189
HindII GTYRAC 2 cut(s) 951, 1189
HinfI GANTC 9 cut(s) 244, 533, 689, 758, 1238, 1292, 1327, 1351, 1367
HpaII CCGG 4 cut(s) 27, 614, 946, 1392
HphI GGTGA 3 cut(s) 872, 1268, 1349
Hpy166II GTNNAC 7 cut(s) 17, 251, 257, 780, 951, 1189, 1436
Hpy188I TCNGA 7 cut(s) 73, 129, 411, 522, 694, 738, 1228
Hpy188III TCNNGA 4 cut(s) 335, 495, 592, 1324
Hpy8I GTNNAC 7 cut(s) 17, 251, 257, 780, 951, 1189, 1436
Hpy99I CGWCG 2 cut(s) 624, 1325
HpyAV CCTTC 7 cut(s) 68, 202, 346, 379, 673, 1276, 1480
HpyCH4III ACNGT 6 cut(s) 14, 796, 974, 994, 1433, 1440
HpyCH4IV ACGT 1 cut(s) 253
HpyCH4V TGCA 5 cut(s) 96, 251, 376, 581, 639
HpyF10VI GCNNNNNNNGC 1 cut(s) 705
HpyF3I CTNAG 4 cut(s) 941, 1074, 1207, 1422
HpySE526I ACGT 1 cut(s) 253
Hsp92I GRCGYC 1 cut(s) 1320
Hsp92II CATG 8 cut(s) 223, 398, 403, 595, 678, 708, 1083, 1485
HspAI GCGC 1 cut(s) 962
Kzo9I GATC 5 cut(s) 124, 274, 517, 594, 1039
LmnI GCTCC 2 cut(s) 616, 1023
Lsp1109I GCAGC 1 cut(s) 922
LweI GCATC 3 cut(s) 590, 729, 1249
MaeI CTAG 1 cut(s) 495
MaeII ACGT 1 cut(s) 253
MaeIII GTNAC 2 cut(s) 658, 710
MalI GATC 5 cut(s) 126, 276, 519, 596, 1041
MboI GATC 5 cut(s) 124, 274, 517, 594, 1039
MboII GAAGA 8 cut(s) 47, 68, 282, 315, 350, 814, 935, 1376
MflI RGATCY 3 cut(s) 124, 274, 1039
MhlI GDGCHC 2 cut(s) 253, 1020
MlsI TGGCCA 1 cut(s) 450
MluCI AATT 6 cut(s) 502, 527, 835, 884, 998, 1233
MluNI TGGCCA 1 cut(s) 450
MlyI GAGTC 2 cut(s) 542, 698
MmeI TCCRAC 1 cut(s) 467
Mox20I TGGCCA 1 cut(s) 450
MscI TGGCCA 1 cut(s) 450
MseI TTAA 4 cut(s) 159, 525, 564, 798
MslI CAYNNNNRTG 1 cut(s) 1026
Msp20I TGGCCA 1 cut(s) 450
MspI CCGG 4 cut(s) 27, 614, 946, 1392
MspR9I CCNGG 3 cut(s) 28, 1337, 1393
Mva1269I GAATGC 1 cut(s) 699
MvaI CCWGG 1 cut(s) 1337
MwoI GCNNNNNNNGC 1 cut(s) 705
NciI CCSGG 2 cut(s) 28, 1393
NdeII GATC 5 cut(s) 124, 274, 517, 594, 1039
NlaIII CATG 8 cut(s) 223, 398, 403, 595, 678, 708, 1083, 1485
NlaIV GGNNCC 2 cut(s) 1019, 1041
NmuCI GTSAC 1 cut(s) 710
NsbI TGCGCA 1 cut(s) 963
NspI RCATGY 1 cut(s) 1083
PagI TCATGA 1 cut(s) 591
PctI GAATGC 1 cut(s) 699
PfeI GAWTC 7 cut(s) 244, 758, 1238, 1292, 1327, 1351, 1367
PflFI GACNNNGTC 2 cut(s) 808, 1319
PkrI GCNGC 1 cut(s) 937
PleI GAGTC 2 cut(s) 541, 697
PpsI GAGTC 2 cut(s) 541, 697
Ppu21I YACGTR 1 cut(s) 254
Psp6I CCWGG 1 cut(s) 1335
PspFI CCCAGC 2 cut(s) 508, 1083
PspGI CCWGG 1 cut(s) 1335
PspN4I GGNNCC 2 cut(s) 1019, 1041
PspPI GGNCC 2 cut(s) 329, 724
PstI CTGCAG 1 cut(s) 378
PsuI RGATCY 3 cut(s) 124, 274, 1039
PsyI GACNNNGTC 2 cut(s) 808, 1319
RsaI GTAC 1 cut(s) 256
RsaNI GTAC 1 cut(s) 255
RseI CAYNNNNRTG 1 cut(s) 1026
SaqAI TTAA 4 cut(s) 159, 525, 564, 798
SatI GCNGC 1 cut(s) 936
Sau3AI GATC 5 cut(s) 124, 274, 517, 594, 1039
Sau96I GGNCC 2 cut(s) 329, 724
SchI GAGTC 2 cut(s) 542, 698
ScrFI CCNGG 3 cut(s) 28, 1337, 1393
SduI GDGCHC 2 cut(s) 253, 1020
SfaNI GCATC 3 cut(s) 590, 729, 1249
SfcI CTRYAG 1 cut(s) 374
SinI GGWCC 2 cut(s) 329, 724
SmiMI CAYNNNNRTG 1 cut(s) 1026
SmlI CTYRAG 1 cut(s) 167
SmoI CTYRAG 1 cut(s) 167
Sse9I AATT 6 cut(s) 502, 527, 835, 884, 998, 1233
SsiI CCGC 4 cut(s) 484, 742, 1372, 1416
SspMI CTAG 1 cut(s) 495
StyD4I CCNGG 3 cut(s) 26, 1335, 1391
StyI CCWWGG 1 cut(s) 930
TaaI ACNGT 6 cut(s) 14, 796, 974, 994, 1433, 1440
TaiI ACGT 1 cut(s) 256
TaqI TCGA 4 cut(s) 287, 531, 812, 853
TaqII GACCGA 1 cut(s) 712
TasI AATT 6 cut(s) 502, 527, 835, 884, 998, 1233
TfiI GAWTC 7 cut(s) 244, 758, 1238, 1292, 1327, 1351, 1367
Tru1I TTAA 4 cut(s) 159, 525, 564, 798
Tru9I TTAA 4 cut(s) 159, 525, 564, 798
TscAI CASTG 6 cut(s) 19, 207, 264, 799, 1255, 1276
TseFI GTSAC 1 cut(s) 710
TseI GCWGC 1 cut(s) 935
Tsp45I GTSAC 1 cut(s) 710
TspDTI ATGAA 7 cut(s) 580, 621, 663, 663, 936, 1296, 1343
TspGWI ACGGA 1 cut(s) 947
TspRI CASTG 6 cut(s) 19, 207, 264, 799, 1255, 1276
Tth111I GACNNNGTC 2 cut(s) 808, 1319
VneI GTGCAC 1 cut(s) 249
VpaK11BI GGWCC 2 cut(s) 329, 724
XapI RAATTY 2 cut(s) 527, 884
XbaI TCTAGA 1 cut(s) 494
XceI RCATGY 1 cut(s) 1083
XcmI CCANNNNNNNNNTGG 1 cut(s) 1148
XspI CTAG 1 cut(s) 495
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.