Rh5DG300100

Protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000074
Physical Location & Seq
Reverse (-)
37659742 .. 37660653
912 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG300100.1

Sequence Viewer

Length: 912 bp
ATGGATGGGAGCGGCATGCGATTCAGTGAACCGAATTACCATGGTTGGTCTGTAGATGAGGATGACTTTTCAGATGAGTACGAAGAGTTATTCTCGGATGAGGAAGCTTCGCAGAGTGCAAATATGGATGAGAATCTGGATTGTCTACACTTCAATGGCAAGAAGTATGAAGATCTTAGATCCTCTGATATGATTGGTGTTGAGTTTAGCAGCGTCAAGGAAGTGGACACATTCTATGCTTACTATTCACTTGCCATGGGCTTCAGTTTCCGAAAGGAAAAGTTGTGTCGAAATGCAGCACAAGTGGTGGTGAGAAGACAGTTAGTGTGTTCAAAGGAGGGTGAGAGAAAAAAAAGGGGCAAGTCTGATCCTAGTTTTGCATCAGAAATCATTTCATGCGCCAAAAATACTAGTCCACCTCATGGGACAAAACCGGTCTGCAAGAGGAAGACAGTTAACCAGAAACCAATCGTGGAAGATGCTGATACAAGAAGTATGAAACGTTCTGGGAAGCAGTTTGGTGATGGTGAACATGAAAAAAAAAGGCAGCGCCCTCCACAAAGAAATATTACCAGAGGTAATTGTCAAGCCCGTATCACAGCACGCCGATGCAAGGAAAATGGTGTCTTCCGTGTGGTCCAATTCATCACCGAACATAACCACGACCTTGCTACAACAGAGTTTGTTCCCTTCCTCCGATCCCACCGCAAGGTTCGAGACCATGACGTTGCTCAGGTAACAGCACTTAAGAAAGTCTCTGTTGGTACTTGCCGGGCTTATGAGTTGTTGGTCCACCAAGCCGGTGGCCATGAATTTTTTGGTTTCCTCATAAAAGATTTGTATAACAAGATGGACTCTGAAGGAAGGAACTCATGGTTGATGGTGACGCCCAGTCCACAATTAGTTTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

303

Amino Acids

34.64

Weight (kDa)

8.53

Isoelectric Point (pI)

46.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 77 - 122 4.7e-07 FAR1 DNA-binding domain
FAR1 PF03101 172 - 224 8e-08 FAR1 DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 422
AccBSI CCGCTC 1 cut(s) 12
AccI GTMKAC 1 cut(s) 145
AciI CCGC 2 cut(s) 12, 706
AclI AACGTT 1 cut(s) 502
AclWI GGATC 3 cut(s) 174, 362, 693
AcoI YGGCCR 1 cut(s) 805
AcsI RAATTY 1 cut(s) 812
AcuI CTGAAG 2 cut(s) 247, 879
AcyI GRCGYC 1 cut(s) 887
AfaI GTAC 2 cut(s) 80, 766
AfiI CCNNNNNNNGG 3 cut(s) 422, 613, 709
AflII CTTAAG 1 cut(s) 746
AgeI ACCGGT 1 cut(s) 433
AgsI TTSAA 2 cut(s) 154, 333
AhdI GACNNNNNGTC 1 cut(s) 891
AhlI ACTAGT 1 cut(s) 410
AluBI AGCT 1 cut(s) 107
AluI AGCT 1 cut(s) 107
Alw26I GTCTC 2 cut(s) 711, 760
AlwI GGATC 3 cut(s) 174, 362, 693
AoxI GGCC 1 cut(s) 805
ApeKI GCWGC 3 cut(s) 210, 296, 547
ApoI RAATTY 1 cut(s) 812
AsiGI ACCGGT 1 cut(s) 433
AspLEI GCGC 2 cut(s) 401, 552
AspS9I GGNCC 2 cut(s) 637, 790
AsuC2I CCSGG 1 cut(s) 773
AsuHPI GGTGA 6 cut(s) 322, 353, 533, 539, 640, 895
AvaII GGWCC 2 cut(s) 637, 790
BalI TGGCCA 1 cut(s) 807
BbsI GAAGAC 3 cut(s) 322, 455, 619
BbvI GCAGC 3 cut(s) 222, 308, 559
BccI CCATC 3 cut(s) 518, 844, 874
BcnI CCSGG 1 cut(s) 773
BcoDI GTCTC 2 cut(s) 711, 760
BcuI ACTAGT 1 cut(s) 410
BfaI CTAG 2 cut(s) 372, 411
BfmI CTRYAG 1 cut(s) 51
BfoI RGCGCY 1 cut(s) 553
BfrI CTTAAG 1 cut(s) 746
BglII AGATCT 1 cut(s) 172
BisI GCNGC 4 cut(s) 13, 211, 297, 548
BlsI GCNGC 4 cut(s) 14, 212, 298, 549
Bme1390I CCNGG 1 cut(s) 773
Bme18I GGWCC 2 cut(s) 637, 790
BmeRI GACNNNNNGTC 1 cut(s) 891
BmgT120I GGNCC 2 cut(s) 637, 790
BmrFI CCNGG 1 cut(s) 773
BmrI ACTGGG 1 cut(s) 885
BmsI GCATC 3 cut(s) 389, 469, 599
BmuI ACTGGG 1 cut(s) 885
BpiI GAAGAC 3 cut(s) 322, 455, 619
BplI GAGNNNNNCTC 2 cut(s) 77, 109
Bpu10I CCTNAGC 1 cut(s) 732
BpuMI CCSGG 1 cut(s) 773
BsaBI GATNNNNATC 1 cut(s) 132
BsaHI GRCGYC 1 cut(s) 887
BsaI GGTCTC 1 cut(s) 711
BsaJI CCNNGG 2 cut(s) 40, 255
BsaWI WCCGGW 1 cut(s) 433
Bsc4I CCNNNNNNNGG 3 cut(s) 422, 613, 709
Bse118I RCCGGY 2 cut(s) 433, 800
Bse1I ACTGG 1 cut(s) 891
Bse8I GATNNNNATC 1 cut(s) 132
BseDI CCNNGG 2 cut(s) 40, 255
BseGI GGATG 4 cut(s) 10, 67, 103, 133
BseJI GATNNNNATC 1 cut(s) 132
BseLI CCNNNNNNNGG 3 cut(s) 422, 613, 709
BseMII CTCAG 1 cut(s) 746
BseNI ACTGG 1 cut(s) 891
BseXI GCAGC 3 cut(s) 222, 308, 559
BshFI GGCC 1 cut(s) 807
BshTI ACCGGT 1 cut(s) 433
BsiSI CCGG 3 cut(s) 434, 772, 801
BslFI GGGAC 1 cut(s) 439
BslI CCNNNNNNNGG 3 cut(s) 422, 613, 709
BsmAI GTCTC 2 cut(s) 711, 760
BsmFI GGGAC 1 cut(s) 439
BsnI GGCC 1 cut(s) 807
Bso31I GGTCTC 1 cut(s) 711
Bsp143I GATC 4 cut(s) 172, 179, 367, 698
Bsp19I CCATGG 2 cut(s) 40, 255
BspACI CCGC 2 cut(s) 12, 706
BspANI GGCC 1 cut(s) 807
BspCNI CTCAG 1 cut(s) 745
BspHI TCATGA 1 cut(s) 908
BspPI GGATC 3 cut(s) 174, 362, 693
BspTI CTTAAG 1 cut(s) 746
BspTNI GGTCTC 1 cut(s) 711
BsrBI CCGCTC 1 cut(s) 12
BsrFI RCCGGY 2 cut(s) 433, 800
BsrI ACTGG 1 cut(s) 891
BssAI RCCGGY 2 cut(s) 433, 800
BssECI CCNNGG 2 cut(s) 40, 255
BssMI GATC 4 cut(s) 172, 179, 367, 698
BssNI GRCGYC 1 cut(s) 887
BssT1I CCWWGG 2 cut(s) 40, 255
Bst4CI ACNGT 2 cut(s) 321, 454
Bst6I CTCTTC 1 cut(s) 78
BstACI GRCGYC 1 cut(s) 887
BstAFI CTTAAG 1 cut(s) 746
BstC8I GCNNGC 2 cut(s) 17, 604
BstDEI CTNAG 2 cut(s) 176, 732
BstDSI CCRYGG 2 cut(s) 40, 255
BstF5I GGATG 4 cut(s) 10, 67, 103, 133
BstH2I RGCGCY 1 cut(s) 553
BstHHI GCGC 2 cut(s) 401, 552
BstKTI GATC 4 cut(s) 175, 182, 370, 701
BstMAI GTCTC 2 cut(s) 711, 760
BstMBI GATC 4 cut(s) 172, 179, 367, 698
BstNSI RCATGY 1 cut(s) 19
BstSCI CCNGG 1 cut(s) 771
BstSFI CTRYAG 1 cut(s) 51
BstV1I GCAGC 3 cut(s) 222, 308, 559
BstV2I GAAGAC 3 cut(s) 322, 455, 619
BstX2I RGATCY 2 cut(s) 172, 179
BstXI CCANNNNNNTGG 1 cut(s) 803
BstYI RGATCY 2 cut(s) 172, 179
BsuRI GGCC 1 cut(s) 807
BtgI CCRYGG 2 cut(s) 40, 255
BtsCI GGATG 4 cut(s) 10, 67, 103, 133
BtsIMutI CAGTG 1 cut(s) 31
Cac8I GCNNGC 2 cut(s) 17, 604
CciI TCATGA 1 cut(s) 908
CfoI GCGC 2 cut(s) 401, 552
Cfr10I RCCGGY 2 cut(s) 433, 800
Cfr13I GGNCC 2 cut(s) 637, 790
CseI GACGC 2 cut(s) 202, 895
Csp6I GTAC 2 cut(s) 79, 765
CspAI ACCGGT 1 cut(s) 433
CviJI RGCY 6 cut(s) 107, 261, 590, 776, 800, 807
CviKI_1 RGCY 6 cut(s) 107, 261, 590, 776, 800, 807
CviQI GTAC 2 cut(s) 79, 765
DdeI CTNAG 2 cut(s) 176, 732
DpnI GATC 4 cut(s) 174, 181, 369, 700
DpnII GATC 4 cut(s) 172, 179, 367, 698
DriI GACNNNNNGTC 1 cut(s) 891
EaeI YGGCCR 1 cut(s) 805
Eam1104I CTCTTC 1 cut(s) 78
Eam1105I GACNNNNNGTC 1 cut(s) 891
EarI CTCTTC 1 cut(s) 78
Eco130I CCWWGG 2 cut(s) 40, 255
Eco31I GGTCTC 1 cut(s) 711
Eco47I GGWCC 2 cut(s) 637, 790
Eco57I CTGAAG 2 cut(s) 247, 879
EcoT14I CCWWGG 2 cut(s) 40, 255
ErhI CCWWGG 2 cut(s) 40, 255
FaqI GGGAC 1 cut(s) 439
FblI GTMKAC 1 cut(s) 145
Fnu4HI GCNGC 4 cut(s) 13, 211, 297, 548
FokI GGATG 4 cut(s) 17, 74, 110, 140
Fsp4HI GCNGC 4 cut(s) 13, 211, 297, 548
FspBI CTAG 2 cut(s) 372, 411
GlaI GCGC 2 cut(s) 400, 551
GluI GCNGC 4 cut(s) 13, 211, 297, 548
HaeII RGCGCY 1 cut(s) 553
HaeIII GGCC 1 cut(s) 807
HapII CCGG 3 cut(s) 434, 772, 801
HgaI GACGC 2 cut(s) 202, 895
HhaI GCGC 2 cut(s) 401, 552
Hin1I GRCGYC 1 cut(s) 887
Hin6I GCGC 2 cut(s) 399, 550
HinP1I GCGC 2 cut(s) 399, 550
HincII GTYRAC 1 cut(s) 457
HindII GTYRAC 1 cut(s) 457
HindIII AAGCTT 1 cut(s) 105
HinfI GANTC 3 cut(s) 21, 133, 854
HpaI GTTAAC 1 cut(s) 457
HpaII CCGG 3 cut(s) 434, 772, 801
HphI GGTGA 6 cut(s) 322, 353, 533, 539, 640, 895
Hpy166II GTNNAC 8 cut(s) 29, 146, 226, 416, 457, 530, 793, 896
Hpy188I TCNGA 8 cut(s) 73, 97, 187, 272, 367, 385, 698, 859
Hpy188III TCNNGA 3 cut(s) 137, 716, 909
Hpy8I GTNNAC 8 cut(s) 29, 146, 226, 416, 457, 530, 793, 896
HpyAV CCTTC 3 cut(s) 700, 854, 858
HpyCH4III ACNGT 2 cut(s) 321, 454
HpyCH4IV ACGT 2 cut(s) 502, 726
HpyCH4V TGCA 5 cut(s) 119, 296, 380, 441, 612
HpyF3I CTNAG 2 cut(s) 176, 732
HpySE526I ACGT 2 cut(s) 502, 726
Hsp92I GRCGYC 1 cut(s) 887
HspAI GCGC 2 cut(s) 399, 550
KspAI GTTAAC 1 cut(s) 457
Kzo9I GATC 4 cut(s) 172, 179, 367, 698
LmnI GCTCC 1 cut(s) 9
LpnPI CCDG 9 cut(s) 122, 447, 473, 492, 586, 719, 785, 814, 904
Lsp1109I GCAGC 3 cut(s) 222, 308, 559
LweI GCATC 3 cut(s) 389, 469, 599
MaeI CTAG 2 cut(s) 372, 411
MaeII ACGT 2 cut(s) 502, 726
MaeIII GTNAC 2 cut(s) 736, 883
MalI GATC 4 cut(s) 174, 181, 369, 700
MbiI CCGCTC 1 cut(s) 12
MboI GATC 4 cut(s) 172, 179, 367, 698
MboII GAAGA 6 cut(s) 95, 182, 327, 460, 488, 619
MflI RGATCY 2 cut(s) 172, 179
MlsI TGGCCA 1 cut(s) 807
MluCI AATT 5 cut(s) 34, 580, 641, 812, 899
MluNI TGGCCA 1 cut(s) 807
MlyI GAGTC 1 cut(s) 848
Mox20I TGGCCA 1 cut(s) 807
MscI TGGCCA 1 cut(s) 807
MseI TTAA 2 cut(s) 456, 747
MslI CAYNNNNRTG 2 cut(s) 153, 607
Msp20I TGGCCA 1 cut(s) 807
MspCI CTTAAG 1 cut(s) 746
MspI CCGG 3 cut(s) 434, 772, 801
MspR9I CCNGG 1 cut(s) 773
NciI CCSGG 1 cut(s) 773
NcoI CCATGG 2 cut(s) 40, 255
NdeII GATC 4 cut(s) 172, 179, 367, 698
NmuCI GTSAC 1 cut(s) 883
NspI RCATGY 1 cut(s) 19
PaeI GCATGC 1 cut(s) 19
PagI TCATGA 1 cut(s) 908
PfeI GAWTC 2 cut(s) 21, 133
PflMI CCANNNNNTGG 1 cut(s) 422
PinAI ACCGGT 1 cut(s) 433
PkrI GCNGC 4 cut(s) 14, 212, 298, 549
PleI GAGTC 1 cut(s) 848
PpsI GAGTC 1 cut(s) 848
Psp1406I AACGTT 1 cut(s) 502
PspPI GGNCC 2 cut(s) 637, 790
PsrI GAACNNNNNNTAC 2 cut(s) 487, 519
PsuI RGATCY 2 cut(s) 172, 179
RsaI GTAC 2 cut(s) 80, 766
RsaNI GTAC 2 cut(s) 79, 765
RseI CAYNNNNRTG 2 cut(s) 153, 607
SaqAI TTAA 2 cut(s) 456, 747
SatI GCNGC 4 cut(s) 13, 211, 297, 548
Sau3AI GATC 4 cut(s) 172, 179, 367, 698
Sau96I GGNCC 2 cut(s) 637, 790
SchI GAGTC 1 cut(s) 848
ScrFI CCNGG 1 cut(s) 773
SetI ASST 8 cut(s) 109, 421, 505, 580, 669, 714, 729, 738
SfaNI GCATC 3 cut(s) 389, 469, 599
SfcI CTRYAG 1 cut(s) 51
SinI GGWCC 2 cut(s) 637, 790
SmiMI CAYNNNNRTG 2 cut(s) 153, 607
SmlI CTYRAG 1 cut(s) 746
SmoI CTYRAG 1 cut(s) 746
SpeI ACTAGT 1 cut(s) 410
SphI GCATGC 1 cut(s) 19
Sse9I AATT 5 cut(s) 34, 580, 641, 812, 899
SsiI CCGC 2 cut(s) 12, 706
SspI AATATT 1 cut(s) 568
SspMI CTAG 2 cut(s) 372, 411
StyD4I CCNGG 1 cut(s) 771
StyI CCWWGG 2 cut(s) 40, 255
TaaI ACNGT 2 cut(s) 321, 454
TaiI ACGT 2 cut(s) 505, 729
TaqI TCGA 2 cut(s) 289, 715
TasI AATT 5 cut(s) 34, 580, 641, 812, 899
TauI GCSGC 1 cut(s) 15
TfiI GAWTC 2 cut(s) 21, 133
Tru1I TTAA 2 cut(s) 456, 747
Tru9I TTAA 2 cut(s) 456, 747
TscAI CASTG 1 cut(s) 31
TseFI GTSAC 1 cut(s) 883
TseI GCWGC 3 cut(s) 210, 296, 547
Tsp45I GTSAC 1 cut(s) 883
TspDTI ATGAA 7 cut(s) 183, 384, 512, 549, 634, 825, 897
TspGWI ACGGA 1 cut(s) 620
TspRI CASTG 1 cut(s) 31
Van91I CCANNNNNTGG 1 cut(s) 422
Vha464I CTTAAG 1 cut(s) 746
VpaK11BI GGWCC 2 cut(s) 637, 790
XapI RAATTY 1 cut(s) 812
XceI RCATGY 1 cut(s) 19
XcmI CCANNNNNNNNNTGG 2 cut(s) 800, 815
XmiI GTMKAC 1 cut(s) 145
XspI CTAG 2 cut(s) 372, 411
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.