Rw6G016630

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000074
Physical Location & Seq
Reverse (-)
32808303 .. 32810955
2653 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G016630.1

Sequence Viewer

Length: 2412 bp
ATGGACATCACCGATGAAGATGGGCTTCGATTCAGCGACTTTAACTATCATAGGCAAGTTTTGTCAGACGACGATGAAGATGAACTTGTTGAATTTGAATGCTTTGGTACCCGTTTTGGAGACGTTCCGGGAAGACACACCATGGCCCCAAAATCACCAATTGGGTTGGAAGCAGAAAAAGAGATGAATGGATCTAATCAGTTCAAGAAAGGAGTCCCGGATTTAGGGCCAGATTTTCGAAATGTGGAAATGAATGGGAGAAATTTCAAAGACATCACATTTGAGGACGTTAAACATATTTGGTTTCGAACCATAGATGAAGCAGAGAAGTTCTACAACTATTACTCCCATGTGGCGGGCTTCAGCACAAGGAAAGCCAAAAAGGACAGACACAAAAGCATGACTGTAGTATATCGAAGACAGTGGGTATGTTCTAAAGCTGGACATCATGTCGCGGTACAAAAGAGCTCTGCATTTCCAACAGATGCAATAAAACAAGGCGCCACTGGTGATAAGAATAAGCAGTCAAGGAACAAATTGCTTCGGGGAAGAAGGTTAACTAGATGTGGCTGCCCTGCCCAGTTGATGATTATGTGGTCTGCTAACCAAAGTAAGTACTATGTTTCAAAGTTTGTGACGCAACACAATCATGATCTTGTTATAGCCCCTGAAGTTCATTTCCTTCGCTCCCATCGTAATGTTGAGGAACACGACATTGCACAGGTTGAATCCCTCCTTCAAGCGCAGGTGTCCATAAGTCGAGCTTACGAATTTCTTGTTTTCCAGGCGGGTGGATATCATAACATGCGATTCACTCTTAAGGATTTGTACAACAAGCTTCATGAAAAGAATTATGGTTTTGGTGCGGAGGGTGATGCTGAAAAGGTTGTATCACGGATGAAATCTAAGGGAGAGGGCGACAAAGAATTCTACTTCGAGTACACAGTTGATAAAGACGCAAGGCTTGCAAACATGTTTTGGCGGGACCATCAATCACTTTTGGACTACAAAGCTTACGGGGATGTGTTGTTGTGGATAGTACGTACAAGACGAACCGGTACAAAACATCGGCAGAATCTTAACTCTGAAGAAGTTATGACCGCTATTGGGCAATTGATGTTTGCGTCTCTGACCGTACCAGAATGGGAGTTGGCATGGGAGTCTCTTATTACGAAGAATGGCCTTGAAAATAATGCATGGCTGTCTTCCCTTTATAATAAGCGGGATCGCTGGGCAGAGGCGTTTTTTAGGGGCCACTTTTTTGGAGGTATGTGCAGCACACAGAGATGTGAGGGTATGAATTGTCAGTTTAAAAAGCAGATTTCCAGGTATACAAAGTTGTCTGATGTTATGCCACGGTTGGGGTGGAAACTATGTCGGTTAAGGGATCGTGTATTGCGTGACAACTTCAATGTGAAAAACAGCACCCCTGTGTTTGACACTCACATGAAGGACTTAGAGGAGCAGGCCTGCAAAATATTCACGCACGACATATTCATCATGATTAAGTCTCAAATAAAGTTTGAGGGGAGGTTTGTCGTTCATCAAAGGTTCAAGTTTCCGAATGCGGACTCAATTGTTTTTTATGTGGGTCAATATGACCGAGTACAACGGCGTTGGTGCGTTGAGTTTCGAGGGAATAATGGCAATCCGGAGTGGTTATGCTCATGCAAGATGTTTGAATCTGATGGTATTCCTTGTGCTCACCTGTTATGTGTTATGAAATATGAGTTGGTTTCACAATTCCCAGAGTCTCTCATTTTCAAGCGATGGACCCGAGCAGTAGGGGAATCAACGTTAGCCCCTCAAATTTCCAACATTTCCAATGATAAGTCTGCCCAGTGTGCACGGTATGCCGCGATCCTAATTGAAGCTGCAGAAGCCTGTTTGAATTACTCAATCACCCCTGAAAGCTTCAACATTGGAATGACTGAACTTCAAACCTTCAAATCTAAATCGTTGCAATACCAGGATGCTGGGAAAACCAACCGACCTCCCCCTACAAACAAGCTGACTGTTGTTAGGGATCCGTTGATGTCAAGAACAAAGGGAATGTCGTGCAATACAGCCAGGCGCACCCATAGTGAAGCGAAGAAAAATGTAATTACTTGCGGACAATGTCATCAGATTGGTCACAACAGACGCACCTGCAACAGACATCAACATAGGTTTCATAACAAAGTTTCCGGCGATGGACACTCTCCATCCATGGACACTCCTGCGGACGTTGGTCACGAATGGGAGCCATTAGTTCCAGACTTTTCTCCACCTGCGAGTGATCACATTTCAAGTCGTTCTCCCACACCAGTACATCAAAACAAGTTGCAGGCAACGACTACCGAACCCCAACCTTCTATATCTATGCAGCTTAATGATTGCATGTGGCCTGCTATGGAGTATCCCCTTGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

803

Amino Acids

92.7

Weight (kDa)

8.86

Isoelectric Point (pI)

45.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 110 - 220 7.5e-16 FAR1 DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1215
AarI CACCTGC 3 cut(s) 736, 2156, 2278
Acc36I ACCTGC 3 cut(s) 736, 2156, 2278
Acc65I GGTACC 1 cut(s) 107
AccB1I GGYRCC 2 cut(s) 107, 500
AccI GTMKAC 1 cut(s) 1331
AccII CGCG 2 cut(s) 455, 1859
AccIII TCCGGA 1 cut(s) 1651
AclI AACGTT 1 cut(s) 1796
AclWI GGATC 6 cut(s) 199, 1233, 1395, 1855, 2021, 2034
AcsI RAATTY 5 cut(s) 92, 262, 770, 926, 1809
AcuI CTGAAG 3 cut(s) 346, 690, 1107
AcyI GRCGYC 1 cut(s) 501
AfiI CCNNNNNNNGG 4 cut(s) 224, 355, 1107, 1361
AflII CTTAAG 1 cut(s) 818
AflIII ACRYGT 1 cut(s) 972
AgeI ACCGGT 1 cut(s) 1055
AhdI GACNNNNNGTC 1 cut(s) 449
AjnI CCWGG 4 cut(s) 783, 1325, 1968, 2069
AjuI GAANNNNNNNTTGG 2 cut(s) 1715, 1747
AleI CACNNNNGTG 1 cut(s) 1430
AluBI AGCT 9 cut(s) 440, 468, 764, 838, 1013, 1874, 1914, 2011, 2368
AluI AGCT 9 cut(s) 440, 468, 764, 838, 1013, 1874, 1914, 2011, 2368
Alw21I GWGCWC 3 cut(s) 470, 1705, 1849
Alw26I GTCTC 5 cut(s) 114, 1131, 1167, 1515, 1758
Alw44I GTGCAC 1 cut(s) 1845
AlwI GGATC 6 cut(s) 199, 1233, 1395, 1855, 2021, 2034
Ama87I CYCGRG 1 cut(s) 1776
Aor13HI TCCGGA 1 cut(s) 1651
AoxI GGCC 6 cut(s) 144, 227, 1180, 1252, 1467, 2384
ApaLI GTGCAC 1 cut(s) 1845
ApeKI GCWGC 4 cut(s) 570, 1275, 1874, 2365
ApoI RAATTY 5 cut(s) 92, 262, 770, 926, 1809
ArsI GACNNNNNNTTYG 4 cut(s) 263, 295, 2039, 2071
AsiGI ACCGGT 1 cut(s) 1055
Asp718I GGTACC 1 cut(s) 107
AspLEI GCGC 3 cut(s) 503, 745, 2076
AspS9I GGNCC 5 cut(s) 145, 227, 985, 1252, 1773
AsuC2I CCSGG 2 cut(s) 129, 218
AsuHPI GGTGA 5 cut(s) 147, 521, 884, 1697, 1894
AsuII TTCGAA 2 cut(s) 238, 307
AvaI CYCGRG 1 cut(s) 1776
AvaII GGWCC 2 cut(s) 985, 1773
BaeGI GKGCMC 1 cut(s) 1849
BamHI GGATCC 1 cut(s) 2026
BanI GGYRCC 2 cut(s) 107, 500
BanII GRGCYC 1 cut(s) 470
BbsI GAAGAC 3 cut(s) 139, 424, 1197
Bbv12I GWGCWC 3 cut(s) 470, 1705, 1849
BbvI GCAGC 4 cut(s) 557, 1287, 1861, 2377
BccI CCATC 7 cut(s) 14, 699, 996, 1682, 1764, 2186, 2212
BceAI ACGGC 1 cut(s) 1628
BciT130I CCWGG 4 cut(s) 785, 1327, 1970, 2071
BciVI GTATCC 1 cut(s) 2409
BclI TGATCA 1 cut(s) 2278
BcnI CCSGG 2 cut(s) 129, 218
BcoDI GTCTC 5 cut(s) 114, 1131, 1167, 1515, 1758
BfaI CTAG 1 cut(s) 561
BfmI CTRYAG 2 cut(s) 405, 1875
BfoI RGCGCY 1 cut(s) 504
BfrI CTTAAG 1 cut(s) 818
BfuAI ACCTGC 3 cut(s) 736, 2156, 2278
BfuI GTATCC 1 cut(s) 2409
BisI GCNGC 5 cut(s) 571, 1276, 1857, 1875, 2366
BlsI GCNGC 5 cut(s) 572, 1277, 1858, 1876, 2367
BmcAI AGTACT 1 cut(s) 617
Bme1390I CCNGG 6 cut(s) 129, 218, 785, 1327, 1970, 2071
Bme18I GGWCC 2 cut(s) 985, 1773
BmeRI GACNNNNNGTC 1 cut(s) 449
BmeT110I CYCGRG 1 cut(s) 1776
BmgT120I GGNCC 5 cut(s) 145, 227, 985, 1252, 1773
BmiI GGNNCC 8 cut(s) 109, 147, 502, 986, 1253, 1775, 2028, 2244
BmrFI CCNGG 6 cut(s) 129, 218, 785, 1327, 1970, 2071
BmrI ACTGGG 2 cut(s) 574, 1834
BmsI GCATC 3 cut(s) 475, 865, 1963
BmuI ACTGGG 2 cut(s) 574, 1834
BoxI GACNNNNGTC 1 cut(s) 2229
BpiI GAAGAC 3 cut(s) 139, 424, 1197
Bpu14I TTCGAA 2 cut(s) 238, 307
BpuMI CCSGG 2 cut(s) 129, 218
BsaAI YACGTR 1 cut(s) 1043
BsaHI GRCGYC 1 cut(s) 501
BsaJI CCNNGG 3 cut(s) 141, 1355, 2208
BsaWI WCCGGW 2 cut(s) 1055, 1651
BsaXI ACNNNNNCTCC 2 cut(s) 329, 359
Bsc4I CCNNNNNNNGG 4 cut(s) 224, 355, 1107, 1361
Bse118I RCCGGY 1 cut(s) 1055
Bse1I ACTGG 4 cut(s) 511, 580, 1840, 2306
Bse3DI GCAATG 1 cut(s) 714
BseAI TCCGGA 1 cut(s) 1651
BseBI CCWGG 4 cut(s) 785, 1327, 1970, 2071
BseDI CCNNGG 3 cut(s) 141, 1355, 2208
BseGI GGATG 4 cut(s) 903, 1027, 1978, 2204
BseLI CCNNNNNNNGG 4 cut(s) 224, 355, 1107, 1361
BseMI GCAATG 1 cut(s) 714
BseNI ACTGG 4 cut(s) 511, 580, 1840, 2306
BseRI GAGGAG 1 cut(s) 1475
BseSI GKGCMC 1 cut(s) 1849
BseXI GCAGC 4 cut(s) 557, 1287, 1861, 2377
BseYI CCCAGC 2 cut(s) 1230, 1976
BsgI GTGCAG 1 cut(s) 1294
Bsh1236I CGCG 2 cut(s) 455, 1859
BshFI GGCC 6 cut(s) 146, 229, 1182, 1254, 1469, 2386
BshNI GGYRCC 2 cut(s) 107, 500
BshTI ACCGGT 1 cut(s) 1055
BsiHKAI GWGCWC 3 cut(s) 470, 1705, 1849
BsiHKCI CYCGRG 1 cut(s) 1776
BsiSI CCGG 5 cut(s) 128, 218, 1056, 1652, 2187
BslFI GGGAC 2 cut(s) 200, 998
BslI CCNNNNNNNGG 4 cut(s) 224, 355, 1107, 1361
BsmAI GTCTC 5 cut(s) 114, 1131, 1167, 1515, 1758
BsmBI CGTCTC 2 cut(s) 114, 1131
BsmFI GGGAC 2 cut(s) 200, 998
BsmI GAATGC 2 cut(s) 104, 1570
BsnI GGCC 6 cut(s) 146, 229, 1182, 1254, 1469, 2386
BsoBI CYCGRG 1 cut(s) 1776
Bsp119I TTCGAA 2 cut(s) 238, 307
Bsp1286I GDGCHC 3 cut(s) 470, 1705, 1849
Bsp13I TCCGGA 1 cut(s) 1651
Bsp1407I TGTACA 1 cut(s) 828
Bsp143I GATC 7 cut(s) 191, 652, 1225, 1387, 1860, 2026, 2278
Bsp19I CCATGG 2 cut(s) 141, 2208
BspANI GGCC 6 cut(s) 146, 229, 1182, 1254, 1469, 2386
BspEI TCCGGA 1 cut(s) 1651
BspFNI CGCG 2 cut(s) 455, 1859
BspHI TCATGA 3 cut(s) 649, 841, 1500
BspLI GGNNCC 8 cut(s) 109, 147, 502, 986, 1253, 1775, 2028, 2244
BspMAI CTGCAG 1 cut(s) 1879
BspMI ACCTGC 3 cut(s) 736, 2156, 2278
BspPI GGATC 6 cut(s) 199, 1233, 1395, 1855, 2021, 2034
BspT104I TTCGAA 2 cut(s) 238, 307
BspT107I GGYRCC 2 cut(s) 107, 500
BspTI CTTAAG 1 cut(s) 818
BsrDI GCAATG 1 cut(s) 714
BsrFI RCCGGY 1 cut(s) 1055
BsrGI TGTACA 1 cut(s) 828
BsrI ACTGG 4 cut(s) 511, 580, 1840, 2306
BssAI RCCGGY 1 cut(s) 1055
BssECI CCNNGG 3 cut(s) 141, 1355, 2208
BssMI GATC 7 cut(s) 191, 652, 1225, 1387, 1860, 2026, 2278
BssNAI GTATAC 1 cut(s) 1332
BssNI GRCGYC 1 cut(s) 501
BssT1I CCWWGG 2 cut(s) 141, 2208
Bst1107I GTATAC 1 cut(s) 1332
Bst2UI CCWGG 4 cut(s) 785, 1327, 1970, 2071
Bst4CI ACNGT 7 cut(s) 406, 423, 946, 1135, 1359, 1851, 2017
BstACI GRCGYC 1 cut(s) 501
BstAFI CTTAAG 1 cut(s) 818
BstAPI GCANNNNNTGC 2 cut(s) 965, 1853
BstAUI TGTACA 1 cut(s) 828
BstBAI YACGTR 1 cut(s) 1043
BstBI TTCGAA 2 cut(s) 238, 307
BstC8I GCNNGC 6 cut(s) 358, 966, 1467, 1471, 2328, 2388
BstDEI CTNAG 2 cut(s) 906, 1456
BstDSI CCRYGG 3 cut(s) 141, 1355, 2208
BstF5I GGATG 4 cut(s) 903, 1027, 1978, 2204
BstFNI CGCG 2 cut(s) 455, 1859
BstH2I RGCGCY 1 cut(s) 504
BstHHI GCGC 3 cut(s) 503, 745, 2076
BstKTI GATC 7 cut(s) 194, 655, 1228, 1390, 1863, 2029, 2281
BstMAI GTCTC 5 cut(s) 114, 1131, 1167, 1515, 1758
BstMBI GATC 7 cut(s) 191, 652, 1225, 1387, 1860, 2026, 2278
BstMWI GCNNNNNNNGC 4 cut(s) 965, 1844, 1853, 1880
BstNI CCWGG 4 cut(s) 785, 1327, 1970, 2071
BstNSI RCATGY 3 cut(s) 808, 976, 2383
BstPAI GACNNNNGTC 1 cut(s) 2229
BstSCI CCNGG 6 cut(s) 127, 216, 783, 1325, 1968, 2069
BstSFI CTRYAG 2 cut(s) 405, 1875
BstSLI GKGCMC 1 cut(s) 1849
BstSNI TACGTA 1 cut(s) 1043
BstUI CGCG 2 cut(s) 455, 1859
BstV1I GCAGC 4 cut(s) 557, 1287, 1861, 2377
BstV2I GAAGAC 3 cut(s) 139, 424, 1197
BstX2I RGATCY 2 cut(s) 191, 2026
BstXI CCANNNNNNTGG 3 cut(s) 791, 1262, 1976
BstYI RGATCY 2 cut(s) 191, 2026
BstZ17I GTATAC 1 cut(s) 1332
BsuI GTATCC 1 cut(s) 2409
BsuRI GGCC 6 cut(s) 146, 229, 1182, 1254, 1469, 2386
BtgI CCRYGG 3 cut(s) 141, 1355, 2208
BtgZI GCGATG 2 cut(s) 1783, 2205
BtsCI GGATG 4 cut(s) 903, 1027, 1978, 2204
BtsIMutI CAGTG 3 cut(s) 428, 504, 1847
BveI ACCTGC 3 cut(s) 736, 2156, 2278
Cac8I GCNNGC 6 cut(s) 358, 966, 1467, 1471, 2328, 2388
CciI TCATGA 3 cut(s) 649, 841, 1500
CfoI GCGC 3 cut(s) 503, 745, 2076
Cfr10I RCCGGY 1 cut(s) 1055
Cfr13I GGNCC 5 cut(s) 145, 227, 985, 1252, 1773
CseI GACGC 4 cut(s) 646, 965, 1113, 2151
CspAI ACCGGT 1 cut(s) 1055
DdeI CTNAG 2 cut(s) 906, 1456
DinI GGCGCC 1 cut(s) 502
DpnI GATC 7 cut(s) 193, 654, 1227, 1389, 1862, 2028, 2280
DpnII GATC 7 cut(s) 191, 652, 1225, 1387, 1860, 2026, 2278
DraI TTTAAA 1 cut(s) 1312
DriI GACNNNNNGTC 1 cut(s) 449
Eam1105I GACNNNNNGTC 1 cut(s) 449
Ecl136II GAGCTC 1 cut(s) 468
Eco105I TACGTA 1 cut(s) 1043
Eco130I CCWWGG 2 cut(s) 141, 2208
Eco147I AGGCCT 1 cut(s) 1469
Eco24I GRGCYC 1 cut(s) 470
Eco32I GATATC 1 cut(s) 797
Eco47I GGWCC 2 cut(s) 985, 1773
Eco53kI GAGCTC 1 cut(s) 468
Eco57I CTGAAG 3 cut(s) 346, 690, 1107
Eco88I CYCGRG 1 cut(s) 1776
EcoICRI GAGCTC 1 cut(s) 468
EcoRI GAATTC 1 cut(s) 926
EcoRII CCWGG 4 cut(s) 783, 1325, 1968, 2069
EcoRV GATATC 1 cut(s) 797
EcoT14I CCWWGG 2 cut(s) 141, 2208
EcoT22I ATGCAT 1 cut(s) 1198
EcoT38I GRGCYC 1 cut(s) 470
EgeI GGCGCC 1 cut(s) 502
EheI GGCGCC 1 cut(s) 502
ErhI CCWWGG 2 cut(s) 141, 2208
Esp3I CGTCTC 2 cut(s) 114, 1131
FalI AAGNNNNNCTT 6 cut(s) 9, 41, 69, 101, 748, 780
FaqI GGGAC 2 cut(s) 200, 998
FauI CCCGC 4 cut(s) 349, 781, 975, 1215
FbaI TGATCA 1 cut(s) 2278
FblI GTMKAC 1 cut(s) 1331
Fnu4HI GCNGC 5 cut(s) 571, 1276, 1857, 1875, 2366
FokI GGATG 4 cut(s) 910, 1034, 1985, 2191
FriOI GRGCYC 1 cut(s) 470
Fsp4HI GCNGC 5 cut(s) 571, 1276, 1857, 1875, 2366
FspBI CTAG 1 cut(s) 561
GlaI GCGC 3 cut(s) 502, 744, 2075
GluI GCNGC 5 cut(s) 571, 1276, 1857, 1875, 2366
GsaI CCCAGC 2 cut(s) 1234, 1980
HaeII RGCGCY 1 cut(s) 504
HaeIII GGCC 6 cut(s) 146, 229, 1182, 1254, 1469, 2386
HapII CCGG 5 cut(s) 128, 218, 1056, 1652, 2187
HgaI GACGC 4 cut(s) 646, 965, 1113, 2151
HhaI GCGC 3 cut(s) 503, 745, 2076
Hin1I GRCGYC 1 cut(s) 501
Hin6I GCGC 3 cut(s) 501, 743, 2074
HinP1I GCGC 3 cut(s) 501, 743, 2074
HincII GTYRAC 1 cut(s) 558
HindII GTYRAC 1 cut(s) 558
HindIII AAGCTT 3 cut(s) 836, 1011, 1912
HpaI GTTAAC 1 cut(s) 558
HpaII CCGG 5 cut(s) 128, 218, 1056, 1652, 2187
HphI GGTGA 5 cut(s) 147, 521, 884, 1697, 1894
Hpy166II GTNNAC 4 cut(s) 558, 942, 1332, 1847
Hpy188I TCNGA 7 cut(s) 67, 1087, 1131, 1345, 1563, 1687, 2127
Hpy188III TCNNGA 8 cut(s) 205, 650, 842, 1501, 1652, 2040, 2234, 2255
Hpy8I GTNNAC 4 cut(s) 558, 942, 1332, 1847
Hpy99I CGWCG 1 cut(s) 74
HpyAV CCTTC 6 cut(s) 546, 692, 746, 1444, 1954, 2361
HpyCH4III ACNGT 7 cut(s) 406, 423, 946, 1135, 1359, 1851, 2017
HpyCH4IV ACGT 5 cut(s) 123, 288, 1042, 1796, 2226
HpyF10VI GCNNNNNNNGC 4 cut(s) 965, 1844, 1853, 1880
HpyF3I CTNAG 2 cut(s) 906, 1456
HpySE526I ACGT 5 cut(s) 123, 288, 1042, 1796, 2226
Hsp92I GRCGYC 1 cut(s) 501
HspAI GCGC 3 cut(s) 501, 743, 2074
KasI GGCGCC 1 cut(s) 500
Kpn2I TCCGGA 1 cut(s) 1651
KpnI GGTACC 1 cut(s) 111
Ksp22I TGATCA 1 cut(s) 2278
KspAI GTTAAC 1 cut(s) 558
Kzo9I GATC 7 cut(s) 191, 652, 1225, 1387, 1860, 2026, 2278
LmnI GCTCC 3 cut(s) 692, 1462, 2242
Lsp1109I GCAGC 4 cut(s) 557, 1287, 1861, 2377
LweI GCATC 3 cut(s) 475, 865, 1963
MaeI CTAG 1 cut(s) 561
MaeII ACGT 5 cut(s) 123, 288, 1042, 1796, 2226
MaeIII GTNAC 4 cut(s) 634, 1400, 2132, 2231
MalI GATC 7 cut(s) 193, 654, 1227, 1389, 1862, 2028, 2280
MboI GATC 7 cut(s) 191, 652, 1225, 1387, 1860, 2026, 2278
MboII GAAGA 9 cut(s) 29, 89, 144, 429, 561, 1100, 1186, 1197, 2104
MfeI CAATTG 3 cut(s) 159, 1112, 1575
MflI RGATCY 2 cut(s) 191, 2026
MhlI GDGCHC 3 cut(s) 470, 1705, 1849
Mly113I GGCGCC 1 cut(s) 501
MlyI GAGTC 4 cut(s) 222, 1169, 1565, 1760
MmeI TCCRAC 3 cut(s) 147, 503, 1839
Mph1103I ATGCAT 1 cut(s) 1198
MroI TCCGGA 1 cut(s) 1651
MseI TTAA 9 cut(s) 42, 291, 557, 819, 1080, 1311, 1382, 1506, 2370
MslI CAYNNNNRTG 6 cut(s) 648, 696, 1285, 1430, 1445, 1925
MspCI CTTAAG 1 cut(s) 818
MspI CCGG 5 cut(s) 128, 218, 1056, 1652, 2187
MspR9I CCNGG 6 cut(s) 129, 218, 785, 1327, 1970, 2071
MunI CAATTG 3 cut(s) 159, 1112, 1575
Mva1269I GAATGC 2 cut(s) 104, 1570
MvaI CCWGG 4 cut(s) 785, 1327, 1970, 2071
MvnI CGCG 2 cut(s) 455, 1859
MwoI GCNNNNNNNGC 4 cut(s) 965, 1844, 1853, 1880
NarI GGCGCC 1 cut(s) 501
NciI CCSGG 2 cut(s) 129, 218
NcoI CCATGG 2 cut(s) 141, 2208
NdeII GATC 7 cut(s) 191, 652, 1225, 1387, 1860, 2026, 2278
NlaIV GGNNCC 8 cut(s) 109, 147, 502, 986, 1253, 1775, 2028, 2244
NmuCI GTSAC 4 cut(s) 634, 1400, 2132, 2231
NsiI ATGCAT 1 cut(s) 1198
NspI RCATGY 3 cut(s) 808, 976, 2383
NspV TTCGAA 2 cut(s) 238, 307
OliI CACNNNNGTG 1 cut(s) 1430
PagI TCATGA 3 cut(s) 649, 841, 1500
PaqCI CACCTGC 3 cut(s) 736, 2156, 2278
PceI AGGCCT 1 cut(s) 1469
PciI ACATGT 1 cut(s) 972
PcsI WCGNNNNNNNCGW 4 cut(s) 691, 1048, 1396, 2232
PctI GAATGC 2 cut(s) 104, 1570
PfeI GAWTC 6 cut(s) 30, 728, 810, 1075, 1682, 1790
PflFI GACNNNGTC 1 cut(s) 2118
PfoI TCCNGGA 2 cut(s) 127, 216
PinAI ACCGGT 1 cut(s) 1055
PkrI GCNGC 5 cut(s) 572, 1277, 1858, 1876, 2367
PleI GAGTC 4 cut(s) 221, 1168, 1565, 1759
PluTI GGCGCC 1 cut(s) 504
PpsI GAGTC 4 cut(s) 221, 1168, 1565, 1759
Ppu21I YACGTR 1 cut(s) 1043
PscI ACATGT 1 cut(s) 972
PshAI GACNNNNGTC 1 cut(s) 2229
PsiI TTATAA 1 cut(s) 1215
Psp124BI GAGCTC 1 cut(s) 470
Psp1406I AACGTT 1 cut(s) 1796
Psp6I CCWGG 4 cut(s) 783, 1325, 1968, 2069
PspFI CCCAGC 2 cut(s) 1230, 1976
PspGI CCWGG 4 cut(s) 783, 1325, 1968, 2069
PspN4I GGNNCC 8 cut(s) 109, 147, 502, 986, 1253, 1775, 2028, 2244
PspPI GGNCC 5 cut(s) 145, 227, 985, 1252, 1773
PstI CTGCAG 1 cut(s) 1879
PsuI RGATCY 2 cut(s) 191, 2026
PsyI GACNNNGTC 1 cut(s) 2118
RseI CAYNNNNRTG 6 cut(s) 648, 696, 1285, 1430, 1445, 1925
SacI GAGCTC 1 cut(s) 470
SaqAI TTAA 9 cut(s) 42, 291, 557, 819, 1080, 1311, 1382, 1506, 2370
SatI GCNGC 5 cut(s) 571, 1276, 1857, 1875, 2366
Sau3AI GATC 7 cut(s) 191, 652, 1225, 1387, 1860, 2026, 2278
Sau96I GGNCC 5 cut(s) 145, 227, 985, 1252, 1773
ScaI AGTACT 1 cut(s) 617
SchI GAGTC 4 cut(s) 222, 1169, 1565, 1760
ScrFI CCNGG 6 cut(s) 129, 218, 785, 1327, 1970, 2071
SduI GDGCHC 3 cut(s) 470, 1705, 1849
SfaNI GCATC 3 cut(s) 475, 865, 1963
SfcI CTRYAG 2 cut(s) 405, 1875
SfoI GGCGCC 1 cut(s) 502
SfuI TTCGAA 2 cut(s) 238, 307
SinI GGWCC 2 cut(s) 985, 1773
SmiMI CAYNNNNRTG 6 cut(s) 648, 696, 1285, 1430, 1445, 1925
SmlI CTYRAG 1 cut(s) 818
SmoI CTYRAG 1 cut(s) 818
SnaBI TACGTA 1 cut(s) 1043
SseBI AGGCCT 1 cut(s) 1469
SspDI GGCGCC 1 cut(s) 500
SspI AATATT 1 cut(s) 1479
SspMI CTAG 1 cut(s) 561
SstI GAGCTC 1 cut(s) 470
StuI AGGCCT 1 cut(s) 1469
StyD4I CCNGG 6 cut(s) 127, 216, 783, 1325, 1968, 2069
StyI CCWWGG 2 cut(s) 141, 2208
TaaI ACNGT 7 cut(s) 406, 423, 946, 1135, 1359, 1851, 2017
TaiI ACGT 5 cut(s) 126, 291, 1045, 1799, 2229
TaqI TCGA 7 cut(s) 28, 238, 307, 415, 760, 936, 1633
TaqII GACCGA 1 cut(s) 1617
TatI WGTACW 5 cut(s) 615, 828, 939, 1606, 2308
TauI GCSGC 1 cut(s) 1859
TfiI GAWTC 6 cut(s) 30, 728, 810, 1075, 1682, 1790
Tru1I TTAA 9 cut(s) 42, 291, 557, 819, 1080, 1311, 1382, 1506, 2370
Tru9I TTAA 9 cut(s) 42, 291, 557, 819, 1080, 1311, 1382, 1506, 2370
TscAI CASTG 3 cut(s) 428, 511, 1847
TseFI GTSAC 4 cut(s) 634, 1400, 2132, 2231
TseI GCWGC 4 cut(s) 570, 1275, 1874, 2365
Tsp45I GTSAC 4 cut(s) 634, 1400, 2132, 2231
TspGWI ACGGA 2 cut(s) 910, 2019
TspRI CASTG 3 cut(s) 428, 511, 1847
Tth111I GACNNNGTC 1 cut(s) 2118
Vha464I CTTAAG 1 cut(s) 818
VneI GTGCAC 1 cut(s) 1845
VpaK11BI GGWCC 2 cut(s) 985, 1773
XapI RAATTY 5 cut(s) 92, 262, 770, 926, 1809
XceI RCATGY 3 cut(s) 808, 976, 2383
XcmI CCANNNNNNNNNTGG 1 cut(s) 1362
XmiI GTMKAC 1 cut(s) 1331
XspI CTAG 1 cut(s) 561
ZrmI AGTACT 1 cut(s) 617
Zsp2I ATGCAT 1 cut(s) 1198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.