Rh7DG353000

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000074
Physical Location & Seq
Forward (+)
47021254 .. 47022579
1326 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG353000.1

Sequence Viewer

Length: 1326 bp
ATGGAAGGTATTGGCCAATTGATGTTTGCGTCGCTAACCGTACCCGATTGGGAGTCTAGATGGCAGTCTCTTATTTTGAATAATGGGCTTGAAAAGAATGCGTTGGTGGCTTCTCTTTATAATAAGAGGGATCGCTGGGTTGAGGCTTATTTTAGAGGCCACTTTTTCGAAAGTATGTGTAGCACACAGAGATGCGATGGTATGAATTGTCAGTTTAAAGAGCATATCTCCAGGTATACAAAGTTGTCTGATGTTATGCCACGATTGGGGTGGAAACTGAATCGGTTAAGGGATCGCGTCATGCGTGACAACTTCAACATAAAAAATAGTACCCCTTTGTTTGATACTCATATGAGGGGCTTTGAGGAGCAGGCGTGCAGAATATTCACACATGACATATTTATTATGATTAAGTCTCAAATCAAATTTGAGGGGAGGTTTGTCGTTCATCAAAGTTTCAAGTTTCCTAATGCTGACTCTAAAGTTTTTTATGTCGAGCAGTATGATAGAGTAGAACGTCGTTGGTGCGTTGAGTATCGAGGCAACAATGGAAACCCGGAGTGGTTCTGCTCGTGCAAGATGTTTGAGTCCGACGGCATGCCTTGTGCTCACCTGTTCTGTGTAATGAAATCCGAGTTGGTTTCAAATTTCCTAGACTGTCTCATTTTGAAGCGATGGACACATTTAGTTGGGGAAACAACGTTAGCCCCTGCGATTTCCGTAATGTCCAATGTTAAGTCTGCCCAGAGTGCAAGGTATGCTGCCCTACTAATTCAAGCTGCAAAAGCCTGTTTAAATTTCTCCAAATCCCCAGAAAGCTTCAACGATGCAATGATCCAACTTCAAACCTTCAAAGCTAAATCCATGGAGTACAAGGAAGTTGGGGAAGTTGCGGATACCAACCTTCCTCCCCCTACAGACAGTCTCACTGTTGTGAGGGACCCGTTGATGTCAAGAACGAAGGGAATGTCGAGCAACAGACAAGGGCACGCCGACAGTCAAGTTAAGAGAAATATAATTACTTGGGGACGATGTCATCAGATTGGTCATAACCGGCGCACGTGCAAAGGGCACGAAGATAGATTTGAGATCATTGGTTCAAGCGATGGACATTCTCCACCCATCAAAACTCCATCGGTGGTTCATCACGAATGGGAACCTTCAGTTCCCGACTTTTCATGTGCGGGGAGTGATCACATTTCAAGTCCTTCGAGCATAGGTTTACCTACAAACTACTCGCAGCCAACCACTGCCCAACCCAAACGATGTATATCAAATCAGCTTAAGGATTGCATGTGGCCTGATATGGAGTTTCCCCTGTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

441

Amino Acids

50.63

Weight (kDa)

8.52

Isoelectric Point (pI)

52.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 120
AccI GTMKAC 1 cut(s) 236
AccII CGCG 1 cut(s) 297
AciI CCGC 2 cut(s) 893, 1184
AclI AACGTT 1 cut(s) 701
AclWI GGATC 3 cut(s) 138, 300, 829
AcoI YGGCCR 1 cut(s) 13
AcsI RAATTY 3 cut(s) 425, 646, 796
AcuI CTGAAG 1 cut(s) 1146
AcvI CACGTG 1 cut(s) 1062
AfaI GTAC 3 cut(s) 42, 331, 872
AfiI CCNNNNNNNGG 1 cut(s) 266
AflII CTTAAG 1 cut(s) 1283
AjnI CCWGG 1 cut(s) 230
AjuI GAANNNNNNNTTGG 2 cut(s) 620, 652
AleI CACNNNNGTG 1 cut(s) 932
AluBI AGCT 4 cut(s) 779, 819, 857, 1282
AluI AGCT 4 cut(s) 779, 819, 857, 1282
Alw21I GWGCWC 1 cut(s) 610
Alw26I GTCTC 4 cut(s) 72, 420, 665, 929
AlwI GGATC 3 cut(s) 138, 300, 829
AoxI GGCC 3 cut(s) 13, 157, 1298
ApeKI GCWGC 3 cut(s) 761, 779, 1240
ApoI RAATTY 3 cut(s) 425, 646, 796
ArsI GACNNNNNNTTYG 2 cut(s) 953, 985
AspLEI GCGC 1 cut(s) 1059
AspS9I GGNCC 1 cut(s) 940
AsuC2I CCSGG 1 cut(s) 557
AsuHPI GGTGA 1 cut(s) 602
AsuII TTCGAA 1 cut(s) 168
AvaII GGWCC 1 cut(s) 940
BaeGI GKGCMC 2 cut(s) 990, 1074
BalI TGGCCA 1 cut(s) 15
BauI CACGAG 1 cut(s) 571
BbrPI CACGTG 1 cut(s) 1062
Bbv12I GWGCWC 1 cut(s) 610
BbvI GCAGC 3 cut(s) 748, 766, 1252
BccI CCATC 6 cut(s) 54, 191, 669, 1100, 1130, 1141
BceAI ACGGC 1 cut(s) 610
BciT130I CCWGG 1 cut(s) 232
BciVI GTATCC 1 cut(s) 889
BclI TGATCA 1 cut(s) 1192
BcnI CCSGG 1 cut(s) 557
BcoDI GTCTC 4 cut(s) 72, 420, 665, 929
BfaI CTAG 2 cut(s) 57, 653
BfmI CTRYAG 1 cut(s) 915
BfrI CTTAAG 1 cut(s) 1283
BfuI GTATCC 1 cut(s) 889
BisI GCNGC 3 cut(s) 762, 780, 1241
BlsI GCNGC 3 cut(s) 763, 781, 1242
Bme1390I CCNGG 2 cut(s) 232, 557
Bme18I GGWCC 1 cut(s) 940
BmgT120I GGNCC 1 cut(s) 940
BmiI GGNNCC 3 cut(s) 941, 942, 1158
BmrFI CCNGG 2 cut(s) 232, 557
BmsI GCATC 2 cut(s) 182, 817
BplI GAGNNNNNCTC 2 cut(s) 212, 244
BpmI CTGGAG 1 cut(s) 214
Bpu14I TTCGAA 1 cut(s) 168
BpuMI CCSGG 1 cut(s) 557
BsaAI YACGTR 1 cut(s) 1062
BsaBI GATNNNNATC 1 cut(s) 1270
BsaJI CCNNGG 1 cut(s) 864
BsaXI ACNNNNNCTCC 2 cut(s) 359, 389
Bsc4I CCNNNNNNNGG 1 cut(s) 266
Bse118I RCCGGY 1 cut(s) 1053
Bse3DI GCAATG 1 cut(s) 837
Bse8I GATNNNNATC 1 cut(s) 1270
BseBI CCWGG 1 cut(s) 232
BseDI CCNNGG 1 cut(s) 864
BseJI GATNNNNATC 1 cut(s) 1270
BseLI CCNNNNNNNGG 1 cut(s) 266
BseMI GCAATG 1 cut(s) 837
BseRI GAGGAG 1 cut(s) 380
BseSI GKGCMC 2 cut(s) 990, 1074
BseXI GCAGC 3 cut(s) 748, 766, 1252
BseYI CCCAGC 1 cut(s) 135
BsgI GTGCAG 1 cut(s) 397
Bsh1236I CGCG 1 cut(s) 297
BshFI GGCC 3 cut(s) 15, 159, 1300
BsiHKAI GWGCWC 1 cut(s) 610
BsiSI CCGG 2 cut(s) 557, 1054
BslFI GGGAC 2 cut(s) 953, 1041
BslI CCNNNNNNNGG 1 cut(s) 266
BsmAI GTCTC 4 cut(s) 72, 420, 665, 929
BsmFI GGGAC 2 cut(s) 953, 1041
BsmI GAATGC 1 cut(s) 103
BsnI GGCC 3 cut(s) 15, 159, 1300
Bsp119I TTCGAA 1 cut(s) 168
Bsp1286I GDGCHC 3 cut(s) 610, 990, 1074
Bsp143I GATC 5 cut(s) 130, 292, 834, 1089, 1192
Bsp19I CCATGG 1 cut(s) 864
BspACI CCGC 2 cut(s) 893, 1184
BspANI GGCC 3 cut(s) 15, 159, 1300
BspFNI CGCG 1 cut(s) 297
BspLI GGNNCC 3 cut(s) 941, 942, 1158
BspPI GGATC 3 cut(s) 138, 300, 829
BspT104I TTCGAA 1 cut(s) 168
BspTI CTTAAG 1 cut(s) 1283
BsrDI GCAATG 1 cut(s) 837
BsrFI RCCGGY 1 cut(s) 1053
BssAI RCCGGY 1 cut(s) 1053
BssECI CCNNGG 1 cut(s) 864
BssMI GATC 5 cut(s) 130, 292, 834, 1089, 1192
BssNAI GTATAC 1 cut(s) 237
BssSI CACGAG 1 cut(s) 571
BssT1I CCWWGG 1 cut(s) 864
Bst1107I GTATAC 1 cut(s) 237
Bst2BI CACGAG 1 cut(s) 571
Bst2UI CCWGG 1 cut(s) 232
Bst4CI ACNGT 5 cut(s) 40, 659, 923, 931, 998
BstAFI CTTAAG 1 cut(s) 1283
BstAPI GCANNNNNTGC 1 cut(s) 758
BstBAI YACGTR 1 cut(s) 1062
BstBI TTCGAA 1 cut(s) 168
BstC8I GCNNGC 4 cut(s) 372, 376, 599, 990
BstDSI CCRYGG 1 cut(s) 864
BstFNI CGCG 1 cut(s) 297
BstHHI GCGC 1 cut(s) 1059
BstKTI GATC 5 cut(s) 133, 295, 837, 1092, 1195
BstMAI GTCTC 4 cut(s) 72, 420, 665, 929
BstMBI GATC 5 cut(s) 130, 292, 834, 1089, 1192
BstMWI GCNNNNNNNGC 4 cut(s) 107, 749, 758, 785
BstNI CCWGG 1 cut(s) 232
BstNSI RCATGY 2 cut(s) 601, 1297
BstSCI CCNGG 2 cut(s) 230, 555
BstSFI CTRYAG 1 cut(s) 915
BstSLI GKGCMC 2 cut(s) 990, 1074
BstUI CGCG 1 cut(s) 297
BstV1I GCAGC 3 cut(s) 748, 766, 1252
BstZ17I GTATAC 1 cut(s) 237
BsuI GTATCC 1 cut(s) 889
BsuRI GGCC 3 cut(s) 15, 159, 1300
BtgI CCRYGG 1 cut(s) 864
BtgZI GCGATG 3 cut(s) 210, 688, 1119
BtsI GCAGTG 1 cut(s) 1248
BtsIMutI CAGTG 2 cut(s) 927, 1248
Cac8I GCNNGC 4 cut(s) 372, 376, 599, 990
CfoI GCGC 1 cut(s) 1059
Cfr10I RCCGGY 1 cut(s) 1053
Cfr13I GGNCC 1 cut(s) 940
CseI GACGC 2 cut(s) 18, 286
Csp6I GTAC 3 cut(s) 41, 330, 871
CviAII CATG 6 cut(s) 301, 392, 598, 865, 1179, 1294
CviQI GTAC 3 cut(s) 41, 330, 871
DpnI GATC 5 cut(s) 132, 294, 836, 1091, 1194
DpnII GATC 5 cut(s) 130, 292, 834, 1089, 1192
DraI TTTAAA 2 cut(s) 217, 795
EaeI YGGCCR 1 cut(s) 13
Eco130I CCWWGG 1 cut(s) 864
Eco47I GGWCC 1 cut(s) 940
Eco57I CTGAAG 1 cut(s) 1146
Eco72I CACGTG 1 cut(s) 1062
EcoO109I RGGNCCY 1 cut(s) 940
EcoRII CCWGG 1 cut(s) 230
EcoT14I CCWWGG 1 cut(s) 864
ErhI CCWWGG 1 cut(s) 864
FaeI CATG 6 cut(s) 304, 395, 601, 868, 1182, 1297
FaqI GGGAC 2 cut(s) 953, 1041
FatI CATG 6 cut(s) 300, 391, 597, 864, 1178, 1293
FauI CCCGC 1 cut(s) 1177
FauNDI CATATG 1 cut(s) 351
FbaI TGATCA 1 cut(s) 1192
FblI GTMKAC 1 cut(s) 236
Fnu4HI GCNGC 3 cut(s) 762, 780, 1241
Fsp4HI GCNGC 3 cut(s) 762, 780, 1241
FspBI CTAG 2 cut(s) 57, 653
GlaI GCGC 1 cut(s) 1058
GluI GCNGC 3 cut(s) 762, 780, 1241
GsaI CCCAGC 1 cut(s) 139
GsuI CTGGAG 1 cut(s) 214
HaeIII GGCC 3 cut(s) 15, 159, 1300
HapII CCGG 2 cut(s) 557, 1054
HgaI GACGC 2 cut(s) 18, 286
HhaI GCGC 1 cut(s) 1059
Hin1II CATG 6 cut(s) 304, 395, 601, 868, 1182, 1297
Hin6I GCGC 1 cut(s) 1057
HinP1I GCGC 1 cut(s) 1057
HindIII AAGCTT 1 cut(s) 817
HinfI GANTC 4 cut(s) 53, 280, 476, 587
HpaII CCGG 2 cut(s) 557, 1054
HphI GGTGA 1 cut(s) 602
Hpy166II GTNNAC 2 cut(s) 237, 1223
Hpy188I TCNGA 4 cut(s) 250, 592, 634, 1041
Hpy188III TCNNGA 4 cut(s) 57, 954, 1148, 1169
Hpy8I GTNNAC 2 cut(s) 237, 1223
Hpy99I CGWCG 3 cut(s) 34, 522, 596
HpyAV CCTTC 5 cut(s) 859, 914, 955, 1170, 1218
HpyCH4III ACNGT 5 cut(s) 40, 659, 923, 931, 998
HpyCH4IV ACGT 3 cut(s) 517, 701, 1061
HpyCH4V TGCA 7 cut(s) 378, 576, 752, 782, 830, 1065, 1293
HpyF10VI GCNNNNNNNGC 4 cut(s) 107, 749, 758, 785
HpySE526I ACGT 3 cut(s) 517, 701, 1061
Hsp92II CATG 6 cut(s) 304, 395, 601, 868, 1182, 1297
HspAI GCGC 1 cut(s) 1057
KflI GGGWCCC 1 cut(s) 940
Ksp22I TGATCA 1 cut(s) 1192
Kzo9I GATC 5 cut(s) 130, 292, 834, 1089, 1192
LmnI GCTCC 1 cut(s) 367
Lsp1109I GCAGC 3 cut(s) 748, 766, 1252
LweI GCATC 2 cut(s) 182, 817
MaeI CTAG 2 cut(s) 57, 653
MaeII ACGT 3 cut(s) 517, 701, 1061
MaeIII GTNAC 1 cut(s) 305
MalI GATC 5 cut(s) 132, 294, 836, 1091, 1194
MboI GATC 5 cut(s) 130, 292, 834, 1089, 1192
MboII GAAGA 1 cut(s) 1088
MfeI CAATTG 1 cut(s) 17
MhlI GDGCHC 3 cut(s) 610, 990, 1074
MlsI TGGCCA 1 cut(s) 15
MluCI AATT 7 cut(s) 17, 205, 425, 646, 771, 796, 1017
MluNI TGGCCA 1 cut(s) 15
MlyI GAGTC 3 cut(s) 62, 470, 596
MmeI TCCRAC 2 cut(s) 615, 862
Mox20I TGGCCA 1 cut(s) 15
MscI TGGCCA 1 cut(s) 15
MseI TTAA 7 cut(s) 216, 287, 411, 735, 794, 1005, 1284
MslI CAYNNNNRTG 2 cut(s) 190, 932
Msp20I TGGCCA 1 cut(s) 15
MspCI CTTAAG 1 cut(s) 1283
MspI CCGG 2 cut(s) 557, 1054
MspR9I CCNGG 2 cut(s) 232, 557
MunI CAATTG 1 cut(s) 17
Mva1269I GAATGC 1 cut(s) 103
MvaI CCWGG 1 cut(s) 232
MvnI CGCG 1 cut(s) 297
MwoI GCNNNNNNNGC 4 cut(s) 107, 749, 758, 785
NciI CCSGG 1 cut(s) 557
NcoI CCATGG 1 cut(s) 864
NdeI CATATG 1 cut(s) 351
NdeII GATC 5 cut(s) 130, 292, 834, 1089, 1192
NlaIII CATG 6 cut(s) 304, 395, 601, 868, 1182, 1297
NlaIV GGNNCC 3 cut(s) 941, 942, 1158
NmuCI GTSAC 1 cut(s) 305
NspI RCATGY 2 cut(s) 601, 1297
NspV TTCGAA 1 cut(s) 168
OliI CACNNNNGTG 1 cut(s) 932
PaeI GCATGC 1 cut(s) 601
PcsI WCGNNNNNNNCGW 1 cut(s) 301
PctI GAATGC 1 cut(s) 103
PfeI GAWTC 1 cut(s) 280
PflFI GACNNNGTC 1 cut(s) 1032
PkrI GCNGC 3 cut(s) 763, 781, 1242
PleI GAGTC 3 cut(s) 61, 470, 595
PmaCI CACGTG 1 cut(s) 1062
PmlI CACGTG 1 cut(s) 1062
PpsI GAGTC 3 cut(s) 61, 470, 595
Ppu21I YACGTR 1 cut(s) 1062
PpuMI RGGWCCY 1 cut(s) 940
PsiI TTATAA 1 cut(s) 120
Psp1406I AACGTT 1 cut(s) 701
Psp5II RGGWCCY 1 cut(s) 940
Psp6I CCWGG 1 cut(s) 230
PspCI CACGTG 1 cut(s) 1062
PspFI CCCAGC 1 cut(s) 135
PspGI CCWGG 1 cut(s) 230
PspN4I GGNNCC 3 cut(s) 941, 942, 1158
PspPI GGNCC 1 cut(s) 940
PspPPI RGGWCCY 1 cut(s) 940
PsyI GACNNNGTC 1 cut(s) 1032
RsaI GTAC 3 cut(s) 42, 331, 872
RsaNI GTAC 3 cut(s) 41, 330, 871
RseI CAYNNNNRTG 2 cut(s) 190, 932
SaqAI TTAA 7 cut(s) 216, 287, 411, 735, 794, 1005, 1284
SatI GCNGC 3 cut(s) 762, 780, 1241
Sau3AI GATC 5 cut(s) 130, 292, 834, 1089, 1192
Sau96I GGNCC 1 cut(s) 940
SchI GAGTC 3 cut(s) 62, 470, 596
ScrFI CCNGG 2 cut(s) 232, 557
SduI GDGCHC 3 cut(s) 610, 990, 1074
SfaNI GCATC 2 cut(s) 182, 817
SfcI CTRYAG 1 cut(s) 915
SfuI TTCGAA 1 cut(s) 168
SinI GGWCC 1 cut(s) 940
SmiMI CAYNNNNRTG 2 cut(s) 190, 932
SmlI CTYRAG 1 cut(s) 1283
SmoI CTYRAG 1 cut(s) 1283
SphI GCATGC 1 cut(s) 601
Sse9I AATT 7 cut(s) 17, 205, 425, 646, 771, 796, 1017
SsiI CCGC 2 cut(s) 893, 1184
SspI AATATT 1 cut(s) 384
SspMI CTAG 2 cut(s) 57, 653
StyD4I CCNGG 2 cut(s) 230, 555
StyI CCWWGG 1 cut(s) 864
TaaI ACNGT 5 cut(s) 40, 659, 923, 931, 998
TaiI ACGT 3 cut(s) 520, 704, 1064
TaqI TCGA 5 cut(s) 168, 495, 538, 971, 1211
TasI AATT 7 cut(s) 17, 205, 425, 646, 771, 796, 1017
TatI WGTACW 1 cut(s) 870
TfiI GAWTC 1 cut(s) 280
Tru1I TTAA 7 cut(s) 216, 287, 411, 735, 794, 1005, 1284
Tru9I TTAA 7 cut(s) 216, 287, 411, 735, 794, 1005, 1284
TscAI CASTG 2 cut(s) 934, 1255
TseFI GTSAC 1 cut(s) 305
TseI GCWGC 3 cut(s) 761, 779, 1240
Tsp45I GTSAC 1 cut(s) 305
TspDTI ATGAA 5 cut(s) 218, 437, 641, 1133, 1167
TspGWI ACGGA 1 cut(s) 709
TspRI CASTG 2 cut(s) 934, 1255
Tth111I GACNNNGTC 1 cut(s) 1032
Vha464I CTTAAG 1 cut(s) 1283
VpaK11BI GGWCC 1 cut(s) 940
XapI RAATTY 3 cut(s) 425, 646, 796
XbaI TCTAGA 1 cut(s) 56
XceI RCATGY 2 cut(s) 601, 1297
XcmI CCANNNNNNNNNTGG 1 cut(s) 267
XmiI GTMKAC 1 cut(s) 236
XspI CTAG 2 cut(s) 57, 653
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.