Rh4AG164800

Protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0000074
Physical Location & Seq
Forward (+)
41646596 .. 41648101
1506 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG164800.1

Sequence Viewer

Length: 1506 bp
ATGAGGAAGTATAAGCAGGACAAGAACCGTGCAGGTACACTGATCATTCGAAGGCAGCTTGTGTGTTCGAGGCAAGGACAGAGAAAACAGTCAGGCCCAGATAGTGGTAAGCAGGATAGTTGGAAGGACTTCTTTGTTAAGGATTGTCGATATAGATCAGATGGGAAGAAAGACATCATGGGCCAGCACCCTCATAAAAAACCAAGGACAAAGAATCGCCGAATAACCAGATGTAACTGTCCAGCAAGTTTAACAGTTAGGCTGTGTACCAAAAGAGGGGTCTACTATGCCTCAGAATTCTCCACTGAGCACAACCATGCATTGACTAGACCTGAGAACCGTCATTTTTTAAGATCGCAGCGGCATGTTAGTGACTACAACCTTGCTCAAGTTAATACATTGAGGAAGGTTTCAGTGAGAACTTGCCGTGCATATGAATTCCTCGTACACCAAGCCGGGGGCTATCAGTTTGTTGGATTTCAAGTGAGGGGCCTGTACAATAAAATGCAGGGTGAACGGAGAGAAATCATGATGGATGGGGATGCACAATCTTCAATAACGTGGATGAATTTGAAAGCATTGCGGGACCCCCATTTTTATTGCATATTCAGTGTTGATGAAGAGGGGAGGCTTGCAAATATGTTTTGGCGAGATGGGCAGTCTTTAACTGATTACAATGCTTTTGGAGATGTTTTGATTTTAAATAGCACTTACAAGACCAACATATTTGGAAGACCCTTGGCTGTATTTGTTGGGTGTAACAACCACAGAGCAACCGTTCTTTTTGGTTGTGCACTATTAGTTGATGAAACTGAGGAAACTTACCATTGGGCCATCACAGCATTTCTCACCTCTATGTACGGCAAAAAACCAATTTCTGTAATCACTGATAGTGATGAAGCTATGCGTAATGCAGTGACTAATCTCATACCGGAGGCAAGACACTGTCTTTGTGCATGGCATATTGGGAGAAACGTGTGTCAACATTTGAAAAACCCAAAAACCCAGACAGATTTCTTTCATTTGATATTTGCTGGTCTTACTGTTGAGCAATGGGAATCCGCATGGCAGTATTTTGTGGCGATGAATCGGCTTGAGAACAACACATGGGTGGCTGGTATGTACAACAAACGTCATAGATGGGGGGAAGCCTTTTTTCGAGACCATTTTTTTGCGGGAATTTGCAGCACCCAACGATGTGAGGGGATGCACAGAAATCTGAAAGGAGGTATTGGCCGTTGTATGAGGTTGTACGAGGTGTTACCTAGGATGGAAAAAACAGTTCAGCGGATCAGACAACAGGTTCTATATGATGATTATCGCTCGGAGAACTATGAACGATTGTATGGAAGTCACATGCGTGGTTTGCAAGAGGACATTGGGAGAAGATTCACCCATGACATCTTTCTCTTAATCAAGGATCAGATTCGATATGAGTCCAAGTTCATTCTTGACCCAAATAGACTTGTTGATCCACACACTCATGCCGTGTTGATATATCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

501

Amino Acids

58.88

Weight (kDa)

9.53

Isoelectric Point (pI)

39.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 2 - 109 2e-08 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 203 - 314 3.7e-06 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 231 - 324 3e-25 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 23
AccB7I CCANNNNNTGG 1 cut(s) 104
AccI GTMKAC 1 cut(s) 282
AciI CCGC 5 cut(s) 361, 583, 1062, 1175, 1288
AclWI GGATC 3 cut(s) 1298, 1428, 1466
AcoI YGGCCR 1 cut(s) 1234
AcsI RAATTY 4 cut(s) 296, 437, 568, 1179
AfaI GTAC 7 cut(s) 37, 268, 447, 497, 860, 1124, 1253
AfiI CCNNNNNNNGG 3 cut(s) 104, 276, 457
AflIII ACRYGT 1 cut(s) 975
AgsI TTSAA 4 cut(s) 482, 555, 574, 991
AleI CACNNNNGTG 2 cut(s) 1109, 1359
AluBI AGCT 2 cut(s) 58, 902
AluI AGCT 2 cut(s) 58, 902
Alw21I GWGCWC 2 cut(s) 312, 796
Alw26I GTCTC 1 cut(s) 1155
Alw44I GTGCAC 1 cut(s) 792
AlwI GGATC 3 cut(s) 1298, 1428, 1466
AoxI GGCC 5 cut(s) 94, 181, 490, 831, 1234
ApaLI GTGCAC 1 cut(s) 792
ApeKI GCWGC 3 cut(s) 55, 358, 1185
ApoI RAATTY 4 cut(s) 296, 437, 568, 1179
ArsI GACNNNNNNTTYG 6 cut(s) 264, 296, 933, 965, 1154, 1186
Asp700I GAANNNNTTC 1 cut(s) 128
AspA2I CCTAGG 1 cut(s) 1265
AspS9I GGNCC 5 cut(s) 95, 181, 490, 586, 831
AsuC2I CCSGG 1 cut(s) 457
AsuHPI GGTGA 3 cut(s) 524, 841, 1384
AsuII TTCGAA 1 cut(s) 49
AvaII GGWCC 1 cut(s) 586
AvrII CCTAGG 1 cut(s) 1265
BaeGI GKGCMC 1 cut(s) 796
BbsI GAAGAC 1 cut(s) 739
Bbv12I GWGCWC 2 cut(s) 312, 796
BbvI GCAGC 3 cut(s) 67, 370, 1197
BccI CCATC 7 cut(s) 155, 526, 530, 647, 842, 1134, 1264
BceAI ACGGC 4 cut(s) 411, 877, 1221, 1472
BclI TGATCA 1 cut(s) 42
BcnI CCSGG 1 cut(s) 457
BcoDI GTCTC 1 cut(s) 1155
BfaI CTAG 2 cut(s) 327, 1266
BfuAI ACCTGC 1 cut(s) 23
BisI GCNGC 4 cut(s) 56, 359, 362, 1186
BlnI CCTAGG 1 cut(s) 1265
BlsI GCNGC 4 cut(s) 57, 360, 363, 1187
Bme1390I CCNGG 1 cut(s) 457
Bme18I GGWCC 1 cut(s) 586
BmgT120I GGNCC 5 cut(s) 95, 181, 490, 586, 831
BmiI GGNNCC 3 cut(s) 491, 587, 588
BmrFI CCNGG 1 cut(s) 457
BmsI GCATC 2 cut(s) 532, 1197
BpiI GAAGAC 1 cut(s) 739
Bpu14I TTCGAA 1 cut(s) 49
BpuEI CTTGAG 2 cut(s) 372, 1115
BpuMI CCSGG 1 cut(s) 457
BsaBI GATNNNNATC 2 cut(s) 154, 1317
BsaI GGTCTC 1 cut(s) 1155
BsaJI CCNNGG 4 cut(s) 203, 456, 738, 1265
BsaWI WCCGGW 1 cut(s) 931
Bsc4I CCNNNNNNNGG 3 cut(s) 104, 276, 457
Bse3DI GCAATG 2 cut(s) 578, 1058
Bse8I GATNNNNATC 2 cut(s) 154, 1317
BseDI CCNNGG 4 cut(s) 203, 456, 738, 1265
BseGI GGATG 5 cut(s) 541, 547, 570, 1212, 1275
BseJI GATNNNNATC 2 cut(s) 154, 1317
BseLI CCNNNNNNNGG 3 cut(s) 104, 276, 457
BseMI GCAATG 2 cut(s) 578, 1058
BseMII CTCAG 4 cut(s) 297, 306, 324, 804
BseSI GKGCMC 1 cut(s) 796
BseXI GCAGC 3 cut(s) 67, 370, 1197
BsgI GTGCAG 1 cut(s) 51
BshFI GGCC 5 cut(s) 96, 183, 492, 833, 1236
BsiHKAI GWGCWC 2 cut(s) 312, 796
BsiSI CCGG 2 cut(s) 456, 932
BslFI GGGAC 1 cut(s) 599
BslI CCNNNNNNNGG 3 cut(s) 104, 276, 457
BsmAI GTCTC 1 cut(s) 1155
BsmFI GGGAC 1 cut(s) 599
BsnI GGCC 5 cut(s) 96, 183, 492, 833, 1236
Bso31I GGTCTC 1 cut(s) 1155
Bsp119I TTCGAA 1 cut(s) 49
Bsp1286I GDGCHC 2 cut(s) 312, 796
Bsp1407I TGTACA 2 cut(s) 495, 1122
Bsp143I GATC 6 cut(s) 42, 155, 353, 1290, 1420, 1471
BspACI CCGC 5 cut(s) 361, 583, 1062, 1175, 1288
BspANI GGCC 5 cut(s) 96, 183, 492, 833, 1236
BspCNI CTCAG 4 cut(s) 298, 305, 325, 805
BspHI TCATGA 1 cut(s) 528
BspLI GGNNCC 3 cut(s) 491, 587, 588
BspMI ACCTGC 1 cut(s) 23
BspPI GGATC 3 cut(s) 1298, 1428, 1466
BspT104I TTCGAA 1 cut(s) 49
BspTNI GGTCTC 1 cut(s) 1155
BsrDI GCAATG 2 cut(s) 578, 1058
BsrGI TGTACA 2 cut(s) 495, 1122
BssECI CCNNGG 4 cut(s) 203, 456, 738, 1265
BssMI GATC 6 cut(s) 42, 155, 353, 1290, 1420, 1471
BssT1I CCWWGG 3 cut(s) 203, 738, 1265
Bst4CI ACNGT 9 cut(s) 29, 90, 239, 256, 341, 778, 947, 1045, 1282
Bst6I CTCTTC 1 cut(s) 615
BstAUI TGTACA 2 cut(s) 495, 1122
BstBI TTCGAA 1 cut(s) 49
BstC8I GCNNGC 2 cut(s) 185, 633
BstDEI CTNAG 4 cut(s) 292, 306, 333, 813
BstF5I GGATG 5 cut(s) 541, 547, 570, 1212, 1275
BstKTI GATC 6 cut(s) 45, 158, 356, 1293, 1423, 1474
BstMAI GTCTC 1 cut(s) 1155
BstMBI GATC 6 cut(s) 42, 155, 353, 1290, 1420, 1471
BstMWI GCNNNNNNNGC 3 cut(s) 655, 839, 1366
BstNSI RCATGY 2 cut(s) 368, 1360
BstSCI CCNGG 1 cut(s) 455
BstSLI GKGCMC 1 cut(s) 796
BstV1I GCAGC 3 cut(s) 67, 370, 1197
BstV2I GAAGAC 1 cut(s) 739
BsuRI GGCC 5 cut(s) 96, 183, 492, 833, 1236
BtgZI GCGATG 1 cut(s) 1097
BtsCI GGATG 5 cut(s) 541, 547, 570, 1212, 1275
BtsI GCAGTG 1 cut(s) 921
BtsIMutI CAGTG 7 cut(s) 38, 303, 420, 616, 885, 921, 943
BveI ACCTGC 1 cut(s) 23
Cac8I GCNNGC 2 cut(s) 185, 633
CciI TCATGA 1 cut(s) 528
Cfr13I GGNCC 5 cut(s) 95, 181, 490, 586, 831
Csp6I GTAC 7 cut(s) 36, 267, 446, 496, 859, 1123, 1252
CviQI GTAC 7 cut(s) 36, 267, 446, 496, 859, 1123, 1252
DdeI CTNAG 4 cut(s) 292, 306, 333, 813
DpnI GATC 6 cut(s) 44, 157, 355, 1292, 1422, 1473
DpnII GATC 6 cut(s) 42, 155, 353, 1290, 1420, 1471
DraI TTTAAA 1 cut(s) 702
EaeI YGGCCR 1 cut(s) 1234
Eam1104I CTCTTC 1 cut(s) 615
EarI CTCTTC 1 cut(s) 615
Eco130I CCWWGG 3 cut(s) 203, 738, 1265
Eco31I GGTCTC 1 cut(s) 1155
Eco47I GGWCC 1 cut(s) 586
EcoO109I RGGNCCY 2 cut(s) 490, 586
EcoRI GAATTC 2 cut(s) 296, 437
EcoT14I CCWWGG 3 cut(s) 203, 738, 1265
EcoT22I ATGCAT 1 cut(s) 322
ErhI CCWWGG 3 cut(s) 203, 738, 1265
FalI AAGNNNNNCTT 2 cut(s) 116, 148
FaqI GGGAC 1 cut(s) 599
FauI CCCGC 2 cut(s) 576, 1168
FauNDI CATATG 1 cut(s) 433
FbaI TGATCA 1 cut(s) 42
FblI GTMKAC 1 cut(s) 282
Fnu4HI GCNGC 4 cut(s) 56, 359, 362, 1186
FokI GGATG 5 cut(s) 548, 554, 577, 1219, 1282
Fsp4HI GCNGC 4 cut(s) 56, 359, 362, 1186
FspBI CTAG 2 cut(s) 327, 1266
GluI GCNGC 4 cut(s) 56, 359, 362, 1186
HaeIII GGCC 5 cut(s) 96, 183, 492, 833, 1236
HapII CCGG 2 cut(s) 456, 932
HincII GTYRAC 1 cut(s) 983
HindII GTYRAC 1 cut(s) 983
HinfI GANTC 6 cut(s) 214, 1058, 1087, 1389, 1426, 1436
HpaII CCGG 2 cut(s) 456, 932
HphI GGTGA 3 cut(s) 524, 841, 1384
Hpy166II GTNNAC 7 cut(s) 38, 267, 283, 448, 515, 794, 983
Hpy188I TCNGA 6 cut(s) 160, 295, 1221, 1295, 1327, 1425
Hpy188III TCNNGA 3 cut(s) 529, 1160, 1451
Hpy8I GTNNAC 7 cut(s) 38, 267, 283, 448, 515, 794, 983
HpyAV CCTTC 3 cut(s) 45, 118, 400
HpyCH4III ACNGT 9 cut(s) 29, 90, 239, 256, 341, 778, 947, 1045, 1282
HpyCH4IV ACGT 3 cut(s) 560, 975, 1132
HpyF10VI GCNNNNNNNGC 3 cut(s) 655, 839, 1366
HpyF3I CTNAG 4 cut(s) 292, 306, 333, 813
HpySE526I ACGT 3 cut(s) 560, 975, 1132
KflI GGGWCCC 1 cut(s) 586
Ksp22I TGATCA 1 cut(s) 42
Kzo9I GATC 6 cut(s) 42, 155, 353, 1290, 1420, 1471
Lsp1109I GCAGC 3 cut(s) 67, 370, 1197
LweI GCATC 2 cut(s) 532, 1197
MaeI CTAG 2 cut(s) 327, 1266
MaeII ACGT 3 cut(s) 560, 975, 1132
MaeIII GTNAC 6 cut(s) 233, 371, 758, 916, 1260, 1352
MalI GATC 6 cut(s) 44, 157, 355, 1292, 1422, 1473
MboI GATC 6 cut(s) 42, 155, 353, 1290, 1420, 1471
MboII GAAGA 5 cut(s) 178, 543, 632, 744, 1398
MhlI GDGCHC 2 cut(s) 312, 796
MluCI AATT 5 cut(s) 296, 437, 568, 873, 1179
MlyI GAGTC 1 cut(s) 1445
MmeI TCCRAC 2 cut(s) 101, 454
Mph1103I ATGCAT 1 cut(s) 322
MroXI GAANNNNTTC 1 cut(s) 128
MseI TTAA 7 cut(s) 138, 251, 350, 393, 665, 701, 1412
MslI CAYNNNNRTG 6 cut(s) 315, 369, 854, 1109, 1359, 1482
MspA1I CMGCKG 2 cut(s) 361, 1288
MspI CCGG 2 cut(s) 456, 932
MspR9I CCNGG 1 cut(s) 457
MwoI GCNNNNNNNGC 3 cut(s) 655, 839, 1366
NciI CCSGG 1 cut(s) 457
NdeI CATATG 1 cut(s) 433
NdeII GATC 6 cut(s) 42, 155, 353, 1290, 1420, 1471
NlaIV GGNNCC 3 cut(s) 491, 587, 588
NmuCI GTSAC 3 cut(s) 371, 916, 1352
NsiI ATGCAT 1 cut(s) 322
NspI RCATGY 2 cut(s) 368, 1360
NspV TTCGAA 1 cut(s) 49
OliI CACNNNNGTG 2 cut(s) 1109, 1359
PagI TCATGA 1 cut(s) 528
PdmI GAANNNNTTC 1 cut(s) 128
PfeI GAWTC 5 cut(s) 214, 1058, 1087, 1389, 1426
PflFI GACNNNGTC 1 cut(s) 945
PflMI CCANNNNNTGG 1 cut(s) 104
PkrI GCNGC 4 cut(s) 57, 360, 363, 1187
PleI GAGTC 1 cut(s) 1444
PpsI GAGTC 1 cut(s) 1444
PpuMI RGGWCCY 1 cut(s) 586
Psp5II RGGWCCY 1 cut(s) 586
PspN4I GGNNCC 3 cut(s) 491, 587, 588
PspPI GGNCC 5 cut(s) 95, 181, 490, 586, 831
PspPPI RGGWCCY 1 cut(s) 586
PsyI GACNNNGTC 1 cut(s) 945
RsaI GTAC 7 cut(s) 37, 268, 447, 497, 860, 1124, 1253
RsaNI GTAC 7 cut(s) 36, 267, 446, 496, 859, 1123, 1252
RseI CAYNNNNRTG 6 cut(s) 315, 369, 854, 1109, 1359, 1482
SaqAI TTAA 7 cut(s) 138, 251, 350, 393, 665, 701, 1412
SatI GCNGC 4 cut(s) 56, 359, 362, 1186
Sau3AI GATC 6 cut(s) 42, 155, 353, 1290, 1420, 1471
Sau96I GGNCC 5 cut(s) 95, 181, 490, 586, 831
SchI GAGTC 1 cut(s) 1445
ScrFI CCNGG 1 cut(s) 457
SduI GDGCHC 2 cut(s) 312, 796
SfaNI GCATC 2 cut(s) 532, 1197
SfuI TTCGAA 1 cut(s) 49
SinI GGWCC 1 cut(s) 586
SmiMI CAYNNNNRTG 6 cut(s) 315, 369, 854, 1109, 1359, 1482
SmlI CTYRAG 2 cut(s) 387, 1094
SmoI CTYRAG 2 cut(s) 387, 1094
Sse9I AATT 5 cut(s) 296, 437, 568, 873, 1179
SsiI CCGC 5 cut(s) 361, 583, 1062, 1175, 1288
SspMI CTAG 2 cut(s) 327, 1266
StyD4I CCNGG 1 cut(s) 455
StyI CCWWGG 3 cut(s) 203, 738, 1265
TaaI ACNGT 9 cut(s) 29, 90, 239, 256, 341, 778, 947, 1045, 1282
TaiI ACGT 3 cut(s) 563, 978, 1135
TaqI TCGA 5 cut(s) 49, 68, 148, 1159, 1429
TasI AATT 5 cut(s) 296, 437, 568, 873, 1179
TatI WGTACW 2 cut(s) 495, 1122
TauI GCSGC 1 cut(s) 364
TfiI GAWTC 5 cut(s) 214, 1058, 1087, 1389, 1426
Tru1I TTAA 7 cut(s) 138, 251, 350, 393, 665, 701, 1412
Tru9I TTAA 7 cut(s) 138, 251, 350, 393, 665, 701, 1412
TscAI CASTG 7 cut(s) 45, 310, 420, 616, 892, 921, 950
TseFI GTSAC 3 cut(s) 371, 916, 1352
TseI GCWGC 3 cut(s) 55, 358, 1185
Tsp45I GTSAC 3 cut(s) 371, 916, 1352
TspDTI ATGAA 9 cut(s) 450, 581, 633, 822, 912, 1010, 1100, 1350, 1435
TspGWI ACGGA 1 cut(s) 532
TspRI CASTG 7 cut(s) 45, 310, 420, 616, 892, 921, 950
Tth111I GACNNNGTC 1 cut(s) 945
Van91I CCANNNNNTGG 1 cut(s) 104
VneI GTGCAC 1 cut(s) 792
VpaK11BI GGWCC 1 cut(s) 586
XapI RAATTY 4 cut(s) 296, 437, 568, 1179
XceI RCATGY 2 cut(s) 368, 1360
XmaJI CCTAGG 1 cut(s) 1265
XmiI GTMKAC 1 cut(s) 282
XmnI GAANNNNTTC 1 cut(s) 128
XspI CTAG 2 cut(s) 327, 1266
Zsp2I ATGCAT 1 cut(s) 322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.