Rorug03G0333000

Protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000074
Physical Location & Seq
Forward (+)
38900123 .. 38901907
1785 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0333000.1

Sequence Viewer

Length: 1785 bp
ATGGAGAGATCAAAATGTGTCAGCAGTGGCAGCAACAGCAACAGCATATCTCAGAAAGAGTGCATCCTTGGAGACAGAAATGTATCATTCCCTGCGTATCGCAGACCAGATCACGAAAAGGATGGCCTTGCGGCAGGTGATGACTCCACTGAAATAAGCATTTTTGAGGCCCAGAAGTACTTCAACGAAAGCATCATTGATGCCCACAAGGTGAGCAACAACAACAATAATGGTGCTATTAATATTAATAACAGAGCAATATCTTCTCCTTTGGCCAACAATGTCAGCATCGACAACATGGAACAGCTTTCGAGATTCTCCTGGGCGGCTTCCTCATCCGTTCATGATGAATACTCCAGTATTAACATGGCAAGGAATAACTACAGAGCTCGGTCTTTTCATGCGGCTGCAACGCCAACGGCTTCATCTGAAGCCAGTTGGAACAGCCAGACCGGATTGTTATCCCATCCTCCTGGTACAGTTGCAGTTTCACTGCGGAGTCCTACTCATCATCATCATCATCAACATCATCATGATCACAAGAAAAGTAGAGGAATGGCCGCATTGCCATCGTCTTCGTCTTCTCCGAGAGTGAGATGGTTTAGTTTTCCAAGAAGATGTCCATGCTCTGGCAAGAAATCAGTTCGAGTTGAGGAAAAAATGTCATCACAGCAACCGGCTAAGACCTCATCATCACATTACGCAGCAGCAGCAGCAGCAGCCGCCCCGAGGAGTATATCCTTGGATCTCAGAAATCAAACACCCAAGTCAAAGTCAGTGGTGGCAGCGAGTGGCGACCAGCATTTGATGTGGGATGAAGAACATGGTCGTCGTTGGGAGGGGCAGATGACTGTTAAGATACCATCAGCTGGAAACCCCCATAATCGATTATTCAGACCTCTTCCTGCTGCTGCGGAGATGCAAGCACAACATACTAACGCCTTTAGCTTTCCCATATTGAAACTGAATGGGAGGGGCACATCGTGGTCCTCGTCGTCACCAATGTTGAAGTTGCAGCAGCAGCCTGCTACTGTAAAACAAGAACCAACTCTGGGACGGGAAGGTCTGGAACCCTTGACTACTAGTACTGATGAACAATCATCCACAACTATTTCAATCCACAAGCCTACTACTACTAGTACTGATCACTCGAGTACTGGTTTCACATTCCCTGCAAGTCCCAAATCCCGAGTAATTATAAGCAATGATGACGATTTGGGAAGCGATGCAAGCTCTGATTTATTCGAGATTGAAAGCTTCTCTACTAGTACTCAAACAACAGCTACTGCCAACAACTACCCATCAGTGTTGTACCAATACAACAACTACCGCAGGGATTCAATGGAAGATGATGCCTCCAGCTTTAATGCTATTAGAGGTTTGTATCGCCGGCGAAGCAGCTTAGATAATGAGCCAATGACGCCTTCATCAGCCGAGTACTGCTACGAGCCTAGTGAAGCAAGCATAGACTGGAGTGTAACCACCGCAGAGGGGTTGGACCGGCCCAGCACATCATCGGAAGCAGATTACCATCAAGATGAGCTGGAAAAGATGAGCAGACGACGCTCGTCATCCGCAGGGAGTTATGGGTTGTTGAGCTGTCGATGGGAGAAGGCGGTGAGCGTGGGGCCGAACCCAGTGAGACTAGTGAGTAGTATGCCTGCTGGTGCTAGTGCTGGTGCTGTTGGTGAGGTGATGAAGCATGTGGGGAGTAGGCCACCCTTACCCTATAAACCACGCTGCTCTCACTTGTCTATTCCTTCTGCAACATCATTCCATTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

594

Amino Acids

64.89

Weight (kDa)

8.36

Isoelectric Point (pI)

62.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1199
AarI CACCTGC 1 cut(s) 125
AasI GACNNNNNNGTC 1 cut(s) 1062
Acc36I ACCTGC 1 cut(s) 125
AccB7I CCANNNNNTGG 2 cut(s) 629, 869
AclWI GGATC 1 cut(s) 753
AcoI YGGCCR 2 cut(s) 273, 558
AcuI CTGAAG 1 cut(s) 450
AcyI GRCGYC 1 cut(s) 1421
AdeI CACNNNGTG 2 cut(s) 211, 984
AfaI GTAC 8 cut(s) 179, 478, 1087, 1141, 1156, 1270, 1313, 1439
AfiI CCNNNNNNNGG 5 cut(s) 629, 729, 869, 1052, 1491
AgsI TTSAA 6 cut(s) 184, 961, 1009, 1116, 1253, 1341
AhlI ACTAGT 4 cut(s) 1082, 1136, 1265, 1645
AjnI CCWGG 2 cut(s) 320, 472
AjuI GAANNNNNNNTTGG 2 cut(s) 1408, 1440
Alw21I GWGCWC 1 cut(s) 391
Alw26I GTCTC 2 cut(s) 66, 1636
AlwI GGATC 1 cut(s) 753
AlwNI CAGNNNCTG 1 cut(s) 1286
Ama87I CYCGRG 3 cut(s) 727, 1150, 1188
AoxI GGCC 7 cut(s) 124, 168, 273, 558, 1502, 1628, 1715
AseI ATTAAT 2 cut(s) 240, 246
Asp700I GAANNNNTTC 1 cut(s) 179
AspS9I GGNCC 5 cut(s) 169, 987, 1498, 1503, 1628
AsuHPI GGTGA 6 cut(s) 149, 223, 990, 1630, 1700, 1705
AvaI CYCGRG 3 cut(s) 727, 1150, 1188
AvaII GGWCC 2 cut(s) 987, 1498
BaeGI GKGCMC 1 cut(s) 980
BalI TGGCCA 1 cut(s) 275
BanII GRGCYC 1 cut(s) 391
BbsI GAAGAC 2 cut(s) 567, 573
Bbv12I GWGCWC 1 cut(s) 391
BccI CCATC 8 cut(s) 116, 474, 577, 591, 871, 1309, 1539, 1599
BceAI ACGGC 1 cut(s) 435
BcgI CGANNNNNNTGC 2 cut(s) 552, 586
BciT130I CCWGG 2 cut(s) 322, 474
BclI TGATCA 2 cut(s) 535, 1144
BcoDI GTCTC 2 cut(s) 66, 1636
BcuI ACTAGT 4 cut(s) 1082, 1136, 1265, 1645
BfaI CTAG 6 cut(s) 1083, 1137, 1266, 1452, 1646, 1671
BfmI CTRYAG 1 cut(s) 382
BfuAI ACCTGC 1 cut(s) 125
BmcAI AGTACT 6 cut(s) 179, 1087, 1141, 1156, 1270, 1439
Bme1390I CCNGG 2 cut(s) 322, 474
Bme18I GGWCC 2 cut(s) 987, 1498
BmeT110I CYCGRG 3 cut(s) 727, 1150, 1188
BmgT120I GGNCC 5 cut(s) 169, 987, 1498, 1503, 1628
BmiI GGNNCC 2 cut(s) 1071, 1629
BmrFI CCNGG 2 cut(s) 322, 474
BmrI ACTGGG 1 cut(s) 1631
BmsI GCATC 7 cut(s) 72, 190, 201, 297, 909, 1216, 1342
BmuI ACTGGG 1 cut(s) 1631
BoxI GACNNNNGTC 1 cut(s) 1567
BpiI GAAGAC 2 cut(s) 567, 573
BplI GAGNNNNNCTC 2 cut(s) 490, 522
BpmI CTGGAG 3 cut(s) 340, 1342, 1492
Bsa29I ATCGAT 1 cut(s) 886
BsaBI GATNNNNATC 2 cut(s) 460, 1530
BsaHI GRCGYC 1 cut(s) 1421
BsaJI CCNNGG 4 cut(s) 67, 321, 728, 741
BsaWI WCCGGW 1 cut(s) 452
Bsc4I CCNNNNNNNGG 5 cut(s) 629, 729, 869, 1052, 1491
Bse118I RCCGGY 3 cut(s) 676, 1389, 1500
Bse1I ACTGG 5 cut(s) 357, 435, 1162, 1475, 1637
Bse3DI GCAATG 2 cut(s) 563, 1210
Bse8I GATNNNNATC 2 cut(s) 460, 1530
BseBI CCWGG 2 cut(s) 322, 474
BseCI ATCGAT 1 cut(s) 886
BseDI CCNNGG 4 cut(s) 67, 321, 728, 741
BseGI GGATG 7 cut(s) 63, 127, 335, 466, 820, 1100, 1571
BseJI GATNNNNATC 2 cut(s) 460, 1530
BseLI CCNNNNNNNGG 5 cut(s) 629, 729, 869, 1052, 1491
BseMI GCAATG 2 cut(s) 563, 1210
BseMII CTCAG 2 cut(s) 65, 763
BseNI ACTGG 5 cut(s) 357, 435, 1162, 1475, 1637
BseRI GAGGAG 1 cut(s) 745
BseSI GKGCMC 1 cut(s) 980
BseYI CCCAGC 1 cut(s) 1505
BshFI GGCC 7 cut(s) 126, 170, 275, 560, 1504, 1630, 1717
BshVI ATCGAT 1 cut(s) 886
BsiHKAI GWGCWC 1 cut(s) 391
BsiHKCI CYCGRG 3 cut(s) 727, 1150, 1188
BsiSI CCGG 4 cut(s) 453, 677, 1390, 1501
BslFI GGGAC 2 cut(s) 1068, 1164
BslI CCNNNNNNNGG 5 cut(s) 629, 729, 869, 1052, 1491
BsmAI GTCTC 2 cut(s) 66, 1636
BsmFI GGGAC 2 cut(s) 1068, 1164
BsnI GGCC 7 cut(s) 126, 170, 275, 560, 1504, 1630, 1717
BsoBI CYCGRG 3 cut(s) 727, 1150, 1188
Bsp1286I GDGCHC 2 cut(s) 391, 980
Bsp143I GATC 5 cut(s) 8, 109, 535, 745, 1144
BspANI GGCC 7 cut(s) 126, 170, 275, 560, 1504, 1630, 1717
BspCNI CTCAG 2 cut(s) 64, 762
BspDI ATCGAT 1 cut(s) 886
BspHI TCATGA 2 cut(s) 343, 532
BspLI GGNNCC 2 cut(s) 1071, 1629
BspMI ACCTGC 1 cut(s) 125
BspPI GGATC 1 cut(s) 753
BsrDI GCAATG 2 cut(s) 563, 1210
BsrFI RCCGGY 3 cut(s) 676, 1389, 1500
BsrI ACTGG 5 cut(s) 357, 435, 1162, 1475, 1637
BssAI RCCGGY 3 cut(s) 676, 1389, 1500
BssECI CCNNGG 4 cut(s) 67, 321, 728, 741
BssMI GATC 5 cut(s) 8, 109, 535, 745, 1144
BssNI GRCGYC 1 cut(s) 1421
BssT1I CCWWGG 2 cut(s) 67, 741
Bst2UI CCWGG 2 cut(s) 322, 474
Bst4CI ACNGT 3 cut(s) 481, 853, 1033
Bst6I CTCTTC 1 cut(s) 906
BstACI GRCGYC 1 cut(s) 1421
BstC8I GCNNGC 6 cut(s) 924, 1026, 1231, 1391, 1462, 1662
BstDEI CTNAG 4 cut(s) 51, 681, 749, 1402
BstF5I GGATG 7 cut(s) 63, 127, 335, 466, 820, 1100, 1571
BstKTI GATC 5 cut(s) 11, 112, 538, 748, 1147
BstMAI GTCTC 2 cut(s) 66, 1636
BstMBI GATC 5 cut(s) 8, 109, 535, 745, 1144
BstNI CCWGG 2 cut(s) 322, 474
BstNSI RCATGY 1 cut(s) 1706
BstPAI GACNNNNGTC 1 cut(s) 1567
BstSCI CCNGG 2 cut(s) 320, 472
BstSFI CTRYAG 1 cut(s) 382
BstSLI GKGCMC 1 cut(s) 980
BstV2I GAAGAC 2 cut(s) 567, 573
BstX2I RGATCY 1 cut(s) 745
BstXI CCANNNNNNTGG 1 cut(s) 473
BstYI RGATCY 1 cut(s) 745
Bsu15I ATCGAT 1 cut(s) 886
BsuRI GGCC 7 cut(s) 126, 170, 275, 560, 1504, 1630, 1717
BsuTUI ATCGAT 1 cut(s) 886
BtgZI GCGATG 1 cut(s) 1239
BtsCI GGATG 7 cut(s) 63, 127, 335, 466, 820, 1100, 1571
BtsI GCAGTG 2 cut(s) 31, 491
BtsIMutI CAGTG 6 cut(s) 31, 147, 491, 783, 1311, 1644
BveI ACCTGC 1 cut(s) 125
Cac8I GCNNGC 6 cut(s) 924, 1026, 1231, 1391, 1462, 1662
CaiI CAGNNNCTG 1 cut(s) 1286
CciI TCATGA 2 cut(s) 343, 532
Cfr10I RCCGGY 3 cut(s) 676, 1389, 1500
Cfr13I GGNCC 5 cut(s) 169, 987, 1498, 1503, 1628
ClaI ATCGAT 1 cut(s) 886
CseI GACGC 2 cut(s) 1429, 1572
Csp6I GTAC 8 cut(s) 178, 477, 1086, 1140, 1155, 1269, 1312, 1438
CspCI CAANNNNNGTGG 2 cut(s) 759, 794
CviAII CATG 8 cut(s) 298, 344, 367, 401, 533, 624, 824, 1703
CviQI GTAC 8 cut(s) 178, 477, 1086, 1140, 1155, 1269, 1312, 1438
DdeI CTNAG 4 cut(s) 51, 681, 749, 1402
DpnI GATC 5 cut(s) 10, 111, 537, 747, 1146
DpnII GATC 5 cut(s) 8, 109, 535, 745, 1144
DraIII CACNNNGTG 2 cut(s) 211, 984
DrdI GACNNNNNNGTC 1 cut(s) 1062
DseDI GACNNNNNNGTC 1 cut(s) 1062
EaeI YGGCCR 2 cut(s) 273, 558
Eam1104I CTCTTC 1 cut(s) 906
EarI CTCTTC 1 cut(s) 906
Ecl136II GAGCTC 1 cut(s) 389
Eco130I CCWWGG 2 cut(s) 67, 741
Eco24I GRGCYC 1 cut(s) 391
Eco47I GGWCC 2 cut(s) 987, 1498
Eco53kI GAGCTC 1 cut(s) 389
Eco57I CTGAAG 1 cut(s) 450
Eco88I CYCGRG 3 cut(s) 727, 1150, 1188
EcoICRI GAGCTC 1 cut(s) 389
EcoRII CCWGG 2 cut(s) 320, 472
EcoT14I CCWWGG 2 cut(s) 67, 741
EcoT38I GRGCYC 1 cut(s) 391
ErhI CCWWGG 2 cut(s) 67, 741
FaeI CATG 8 cut(s) 301, 347, 370, 404, 536, 627, 827, 1706
FaqI GGGAC 2 cut(s) 1068, 1164
FatI CATG 8 cut(s) 297, 343, 366, 400, 532, 623, 823, 1702
FbaI TGATCA 2 cut(s) 535, 1144
FokI GGATG 7 cut(s) 50, 134, 322, 453, 827, 1087, 1558
FriOI GRGCYC 1 cut(s) 391
FspBI CTAG 6 cut(s) 1083, 1137, 1266, 1452, 1646, 1671
GsaI CCCAGC 1 cut(s) 1509
GsuI CTGGAG 3 cut(s) 340, 1342, 1492
HaeIII GGCC 7 cut(s) 126, 170, 275, 560, 1504, 1630, 1717
HapII CCGG 4 cut(s) 453, 677, 1390, 1501
HgaI GACGC 2 cut(s) 1429, 1572
Hin1I GRCGYC 1 cut(s) 1421
Hin1II CATG 8 cut(s) 301, 347, 370, 404, 536, 627, 827, 1706
HindIII AAGCTT 1 cut(s) 1255
HinfI GANTC 4 cut(s) 143, 315, 499, 1337
HpaII CCGG 4 cut(s) 453, 677, 1390, 1501
HphI GGTGA 6 cut(s) 149, 223, 990, 1630, 1700, 1705
Hpy188I TCNGA 7 cut(s) 54, 430, 588, 752, 896, 1237, 1519
Hpy188III TCNNGA 8 cut(s) 113, 312, 344, 533, 1067, 1188, 1246, 1535
Hpy99I CGWCG 3 cut(s) 834, 997, 1566
HpyAV CCTTC 4 cut(s) 1055, 1434, 1606, 1770
HpyCH4III ACNGT 3 cut(s) 481, 853, 1033
HpyCH4V TGCA 8 cut(s) 63, 410, 485, 922, 1015, 1175, 1229, 1766
HpyF3I CTNAG 4 cut(s) 51, 681, 749, 1402
Hsp92I GRCGYC 1 cut(s) 1421
Hsp92II CATG 8 cut(s) 301, 347, 370, 404, 536, 627, 827, 1706
KroI GCCGGC 1 cut(s) 1389
KroNI GCCGGC 1 cut(s) 1391
Ksp22I TGATCA 2 cut(s) 535, 1144
Kzo9I GATC 5 cut(s) 8, 109, 535, 745, 1144
LweI GCATC 7 cut(s) 72, 190, 201, 297, 909, 1216, 1342
MaeI CTAG 6 cut(s) 1083, 1137, 1266, 1452, 1646, 1671
MaeIII GTNAC 2 cut(s) 996, 1477
MalI GATC 5 cut(s) 10, 111, 537, 747, 1146
MboI GATC 5 cut(s) 8, 109, 535, 745, 1144
MboII GAAGA 7 cut(s) 255, 567, 573, 627, 830, 893, 1358
MflI RGATCY 1 cut(s) 745
MhlI GDGCHC 2 cut(s) 391, 980
MlsI TGGCCA 1 cut(s) 275
MluCI AATT 1 cut(s) 1194
MluNI TGGCCA 1 cut(s) 275
MlyI GAGTC 2 cut(s) 137, 508
MmeI TCCRAC 2 cut(s) 419, 1476
Mox20I TGGCCA 1 cut(s) 275
MreI CGCCGGCG 1 cut(s) 1389
MroNI GCCGGC 1 cut(s) 1389
MroXI GAANNNNTTC 1 cut(s) 179
MscI TGGCCA 1 cut(s) 275
MseI TTAA 5 cut(s) 240, 246, 363, 855, 1365
MslI CAYNNNNRTG 2 cut(s) 531, 1536
Msp20I TGGCCA 1 cut(s) 275
MspA1I CMGCKG 1 cut(s) 869
MspI CCGG 4 cut(s) 453, 677, 1390, 1501
MspR9I CCNGG 2 cut(s) 322, 474
MvaI CCWGG 2 cut(s) 322, 474
NaeI GCCGGC 1 cut(s) 1391
NdeII GATC 5 cut(s) 8, 109, 535, 745, 1144
NgoMIV GCCGGC 1 cut(s) 1389
NlaIII CATG 8 cut(s) 301, 347, 370, 404, 536, 627, 827, 1706
NlaIV GGNNCC 2 cut(s) 1071, 1629
NmeAIII GCCGAG 1 cut(s) 1459
NmuCI GTSAC 1 cut(s) 996
NspI RCATGY 1 cut(s) 1706
PaeR7I CTCGAG 1 cut(s) 1150
PagI TCATGA 2 cut(s) 343, 532
PaqCI CACCTGC 1 cut(s) 125
PcsI WCGNNNNNNNCGW 2 cut(s) 584, 989
PdiI GCCGGC 1 cut(s) 1391
PdmI GAANNNNTTC 1 cut(s) 179
PfeI GAWTC 2 cut(s) 315, 1337
PflMI CCANNNNNTGG 2 cut(s) 629, 869
PleI GAGTC 2 cut(s) 137, 507
PpsI GAGTC 2 cut(s) 137, 507
PshAI GACNNNNGTC 1 cut(s) 1567
PshBI ATTAAT 2 cut(s) 240, 246
PsiI TTATAA 1 cut(s) 1199
Psp124BI GAGCTC 1 cut(s) 391
Psp6I CCWGG 2 cut(s) 320, 472
PspFI CCCAGC 1 cut(s) 1505
PspGI CCWGG 2 cut(s) 320, 472
PspN4I GGNNCC 2 cut(s) 1071, 1629
PspPI GGNCC 5 cut(s) 169, 987, 1498, 1503, 1628
PspXI VCTCGAGB 1 cut(s) 1150
PstNI CAGNNNCTG 1 cut(s) 1286
PsuI RGATCY 1 cut(s) 745
PvuII CAGCTG 1 cut(s) 869
RsaI GTAC 8 cut(s) 179, 478, 1087, 1141, 1156, 1270, 1313, 1439
RsaNI GTAC 8 cut(s) 178, 477, 1086, 1140, 1155, 1269, 1312, 1438
RseI CAYNNNNRTG 2 cut(s) 531, 1536
SacI GAGCTC 1 cut(s) 391
SaqAI TTAA 5 cut(s) 240, 246, 363, 855, 1365
Sau3AI GATC 5 cut(s) 8, 109, 535, 745, 1144
Sau96I GGNCC 5 cut(s) 169, 987, 1498, 1503, 1628
ScaI AGTACT 6 cut(s) 179, 1087, 1141, 1156, 1270, 1439
SchI GAGTC 2 cut(s) 137, 508
ScrFI CCNGG 2 cut(s) 322, 474
SduI GDGCHC 2 cut(s) 391, 980
SfaNI GCATC 7 cut(s) 72, 190, 201, 297, 909, 1216, 1342
SfcI CTRYAG 1 cut(s) 382
Sfr274I CTCGAG 1 cut(s) 1150
SgrAI CRCCGGYG 1 cut(s) 1389
SinI GGWCC 2 cut(s) 987, 1498
SlaI CTCGAG 1 cut(s) 1150
SmiMI CAYNNNNRTG 2 cut(s) 531, 1536
SmlI CTYRAG 1 cut(s) 1150
SmoI CTYRAG 1 cut(s) 1150
SpeI ACTAGT 4 cut(s) 1082, 1136, 1265, 1645
Sse9I AATT 1 cut(s) 1194
SspI AATATT 1 cut(s) 244
SspMI CTAG 6 cut(s) 1083, 1137, 1266, 1452, 1646, 1671
SstI GAGCTC 1 cut(s) 391
StyD4I CCNGG 2 cut(s) 320, 472
StyI CCWWGG 2 cut(s) 67, 741
TaaI ACNGT 3 cut(s) 481, 853, 1033
TaqI TCGA 7 cut(s) 291, 311, 646, 886, 1151, 1245, 1603
TaqII GACCGA 1 cut(s) 381
TasI AATT 1 cut(s) 1194
TatI WGTACW 6 cut(s) 177, 1085, 1139, 1154, 1268, 1437
TauI GCSGC 5 cut(s) 134, 329, 407, 563, 725
TfiI GAWTC 2 cut(s) 315, 1337
Tru1I TTAA 5 cut(s) 240, 246, 363, 855, 1365
Tru9I TTAA 5 cut(s) 240, 246, 363, 855, 1365
TscAI CASTG 6 cut(s) 31, 154, 498, 783, 1311, 1644
TseFI GTSAC 1 cut(s) 996
Tsp45I GTSAC 1 cut(s) 996
TspDTI ATGAA 9 cut(s) 332, 363, 389, 414, 831, 1107, 1416, 1712, 1770
TspGWI ACGGA 1 cut(s) 328
TspRI CASTG 6 cut(s) 31, 154, 498, 783, 1311, 1644
Van91I CCANNNNNTGG 2 cut(s) 629, 869
VpaK11BI GGWCC 2 cut(s) 987, 1498
VspI ATTAAT 2 cut(s) 240, 246
XceI RCATGY 1 cut(s) 1706
XcmI CCANNNNNNNNNTGG 1 cut(s) 364
XhoI CTCGAG 1 cut(s) 1150
XmnI GAANNNNTTC 1 cut(s) 179
XspI CTAG 6 cut(s) 1083, 1137, 1266, 1452, 1646, 1671
ZrmI AGTACT 6 cut(s) 179, 1087, 1141, 1156, 1270, 1439
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.