Rh3AG246400

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
OG0000074
Physical Location & Seq
Forward (+)
26343215 .. 26346049
2835 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG246400.1

Sequence Viewer

Length: 1401 bp
ATGGACACAGACGAAGGGGGCCTTCGGTACAGTGACCATATTTATCATGAGTGTTTATCATCAGACGATGAATCAGAAGATGAAATTTCGATTCGGTTTGGTAAATGCACTAAGGTAACAGCGCGTACAAAGGAGGCAACTGATAGTATAATACCTGGTGAATCGGATAAGGAGCTATACTGCGTGACTAAGTTTGTACACGAGCACAATCATGACCTTGCAAAGTCCCATGAAGTTCATTTCTTACGGTCAAGCTGTCACGTGGAAGACAAAGATGTTGCTCAGGTGGAGTGCCTGCACCACGCACAAGTCCACACTAGTAGGGCGTACGAGCAACTGGTAGAGCAAGCCGGGGGACATGACGGTGTTGGCTTCTTGATGAATGATCTGTATAACAAGATTTATGAGTTGAGGAAAAATGCTGAGATGGATGGAGATGCACAGGCTGCCATCACTTGGATGAACATGAGGGGAATGGAGTCAGAAGAGTTCTGCTGCAGTGAATGGAACGCAGCTTGGCAGTCAATTGTGGTTAGAAATGGGTTGTCGGACAATGCATGCATTATAAGTTTGTATAACAAACAGGAGAGGTGGGCAGAAGCATTGTTCAGAGGGCACTTCTTAGATGGAATGTGCAGTACCCAGCGTGTTGAAGGCATGCACGCAAAGCTGAAAAAGAAGATTGGGAGATATCCGGCTTCTTTGATAACCAAATGTTGGACAAAGTGTGTGGGTGATTCAACAGTTGCACCCAAACTTAAGGTCCCCGATCACGACAAGTCAGCTCAAGTGGCCAGGTATTCTGCCCTCATATCAGAAGTGTCCAAAGCGTGCTTAAATTACTCATTTTCAGATGAAGGTTTTAGGGTAGGAAAGAATGAATTTGCAAGGCTAGTTCAAAGCTCAAGTGAGTTCAAGCTTGATCCACCCATGGACACATCAAAAGAGTCTCCGAGCAGCAACGTTGTGAGAGACCCGAAAATATCCGGCACAAAGGGCATGCCCTCTAATCCTACAACAAACACTGAAAATGCCAACAAAGAGCAGCGGATTTGCTGTTCGGTACCTCATGTTGCTCCTTCAGTCCCAAATCTGGCAGACCTATCATCCTATGTGGTAGCCGCAGTCCCTGATCCCCCTGCCTCAGTTCCTCTTCCTGCAGACTTACCATATCATCCCACACCTTGTGTAACTAAGTATGGTATGGAGCTTGATTTTGATGACAATGGCGATAGCAGAGTTGGTGGTATTGGTCAATTCCCATTCTTCGTTGCATCCCAGCATTCCTCATCCTTTGGTATTCTGCCTTTTTCATTCAACCTGAACCATAACGCCCCAAATGATGATGTTACGCAGCTAAAACTGGACTATTCATATCCACCCCCCAAGTGGATCCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

466

Amino Acids

51.85

Weight (kDa)

5.5

Isoelectric Point (pI)

42.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 566
Acc65I GGTACC 1 cut(s) 1063
AccB1I GGYRCC 1 cut(s) 1063
AccB7I CCANNNNNTGG 2 cut(s) 456, 717
AccII CGCG 1 cut(s) 124
AciI CCGC 2 cut(s) 1048, 1122
AclI AACGTT 1 cut(s) 963
AclWI GGATC 4 cut(s) 917, 1127, 1387, 1400
AcoI YGGCCR 1 cut(s) 792
AcsI RAATTY 2 cut(s) 84, 881
AcuI CTGAAG 1 cut(s) 1065
AcvI CACGTG 1 cut(s) 262
AdeI CACNNNGTG 1 cut(s) 1187
AfaI GTAC 6 cut(s) 29, 127, 198, 329, 640, 1065
AfiI CCNNNNNNNGG 4 cut(s) 456, 717, 1093, 1389
AflII CTTAAG 1 cut(s) 758
AgsI TTSAA 5 cut(s) 653, 741, 899, 916, 1318
AhlI ACTAGT 1 cut(s) 317
AjnI CCWGG 2 cut(s) 154, 794
AloI GAACNNNNNNTCC 2 cut(s) 1042, 1074
AluBI AGCT 9 cut(s) 175, 255, 515, 670, 785, 903, 919, 1210, 1357
AluI AGCT 9 cut(s) 175, 255, 515, 670, 785, 903, 919, 1210, 1357
Alw21I GWGCWC 1 cut(s) 207
Alw26I GTCTC 2 cut(s) 954, 966
AlwI GGATC 4 cut(s) 917, 1127, 1387, 1400
AlwNI CAGNNNCTG 1 cut(s) 1130
AoxI GGCC 2 cut(s) 19, 792
ApeKI GCWGC 6 cut(s) 446, 495, 512, 957, 1045, 1354
ApoI RAATTY 2 cut(s) 84, 881
ArsI GACNNNNNNTTYG 2 cut(s) 747, 779
Asp718I GGTACC 1 cut(s) 1063
AspLEI GCGC 1 cut(s) 124
AspS9I GGNCC 2 cut(s) 19, 763
AsuC2I CCSGG 1 cut(s) 352
AsuHPI GGTGA 2 cut(s) 170, 746
AvaII GGWCC 1 cut(s) 763
BaeGI GKGCMC 1 cut(s) 618
BalI TGGCCA 1 cut(s) 794
BamHI GGATCC 1 cut(s) 1392
BanI GGYRCC 1 cut(s) 1063
BauI CACGAG 1 cut(s) 200
BbrPI CACGTG 1 cut(s) 262
BbsI GAAGAC 1 cut(s) 273
Bbv12I GWGCWC 1 cut(s) 207
BbvI GCAGC 6 cut(s) 433, 482, 524, 969, 1057, 1366
BccI CCATC 4 cut(s) 421, 425, 458, 620
BciT130I CCWGG 2 cut(s) 156, 796
BcnI CCSGG 1 cut(s) 352
BcoDI GTCTC 2 cut(s) 954, 966
BcuI ACTAGT 1 cut(s) 317
BfaI CTAG 2 cut(s) 318, 893
BfmI CTRYAG 2 cut(s) 496, 1158
BfrI CTTAAG 1 cut(s) 758
BisI GCNGC 7 cut(s) 447, 496, 513, 958, 1046, 1122, 1355
BlsI GCNGC 7 cut(s) 448, 497, 514, 959, 1047, 1123, 1356
Bme1390I CCNGG 3 cut(s) 156, 352, 796
Bme18I GGWCC 1 cut(s) 763
BmgT120I GGNCC 2 cut(s) 19, 763
BmiI GGNNCC 4 cut(s) 20, 765, 1065, 1394
BmrFI CCNGG 3 cut(s) 156, 352, 796
BmsI GCATC 2 cut(s) 427, 1283
BpiI GAAGAC 1 cut(s) 273
Bpu10I CCTNAGC 1 cut(s) 282
BpuEI CTTGAG 2 cut(s) 771, 889
BpuMI CCSGG 1 cut(s) 352
BsaAI YACGTR 1 cut(s) 262
BsaI GGTCTC 1 cut(s) 966
BsaJI CCNNGG 2 cut(s) 351, 930
Bsc4I CCNNNNNNNGG 4 cut(s) 456, 717, 1093, 1389
Bse1I ACTGG 2 cut(s) 342, 1368
BseBI CCWGG 2 cut(s) 156, 796
BseDI CCNNGG 2 cut(s) 351, 930
BseGI GGATG 6 cut(s) 436, 465, 1106, 1174, 1274, 1289
BseLI CCNNNNNNNGG 4 cut(s) 456, 717, 1093, 1389
BseMII CTCAG 3 cut(s) 296, 414, 1158
BseNI ACTGG 2 cut(s) 342, 1368
BseSI GKGCMC 1 cut(s) 618
BseXI GCAGC 6 cut(s) 433, 482, 524, 969, 1057, 1366
BseYI CCCAGC 2 cut(s) 642, 1278
BsgI GTGCAG 2 cut(s) 281, 655
Bsh1236I CGCG 1 cut(s) 124
BshFI GGCC 2 cut(s) 21, 794
BshNI GGYRCC 1 cut(s) 1063
BsiHKAI GWGCWC 1 cut(s) 207
BsiSI CCGG 3 cut(s) 351, 695, 987
BsiWI CGTACG 1 cut(s) 327
BslFI GGGAC 5 cut(s) 211, 369, 749, 1070, 1112
BslI CCNNNNNNNGG 4 cut(s) 456, 717, 1093, 1389
BsmAI GTCTC 2 cut(s) 954, 966
BsmFI GGGAC 5 cut(s) 211, 369, 749, 1070, 1112
BsmI GAATGC 1 cut(s) 1282
BsnI GGCC 2 cut(s) 21, 794
Bso31I GGTCTC 1 cut(s) 966
Bsp1286I GDGCHC 2 cut(s) 207, 618
Bsp1407I TGTACA 1 cut(s) 196
Bsp143I GATC 5 cut(s) 385, 769, 922, 1132, 1392
Bsp19I CCATGG 1 cut(s) 930
BspACI CCGC 2 cut(s) 1048, 1122
BspANI GGCC 2 cut(s) 21, 794
BspCNI CTCAG 3 cut(s) 295, 415, 1157
BspFNI CGCG 1 cut(s) 124
BspHI TCATGA 2 cut(s) 46, 211
BspLI GGNNCC 4 cut(s) 20, 765, 1065, 1394
BspMAI CTGCAG 2 cut(s) 500, 1162
BspPI GGATC 4 cut(s) 917, 1127, 1387, 1400
BspT107I GGYRCC 1 cut(s) 1063
BspTI CTTAAG 1 cut(s) 758
BspTNI GGTCTC 1 cut(s) 966
BsrGI TGTACA 1 cut(s) 196
BsrI ACTGG 2 cut(s) 342, 1368
BssECI CCNNGG 2 cut(s) 351, 930
BssMI GATC 5 cut(s) 385, 769, 922, 1132, 1392
BssSI CACGAG 1 cut(s) 200
BssT1I CCWWGG 1 cut(s) 930
Bst2BI CACGAG 1 cut(s) 200
Bst2UI CCWGG 2 cut(s) 156, 796
Bst4CI ACNGT 4 cut(s) 32, 249, 365, 745
Bst6I CTCTTC 2 cut(s) 480, 1158
BstAFI CTTAAG 1 cut(s) 758
BstAPI GCANNNNNTGC 1 cut(s) 446
BstAUI TGTACA 1 cut(s) 196
BstBAI YACGTR 1 cut(s) 262
BstC8I GCNNGC 7 cut(s) 296, 348, 559, 659, 663, 832, 1001
BstDEI CTNAG 7 cut(s) 111, 189, 282, 423, 622, 1144, 1194
BstDSI CCRYGG 1 cut(s) 930
BstF5I GGATG 6 cut(s) 436, 465, 1106, 1174, 1274, 1289
BstFNI CGCG 1 cut(s) 124
BstHHI GCGC 1 cut(s) 124
BstKTI GATC 5 cut(s) 388, 772, 925, 1135, 1395
BstMAI GTCTC 2 cut(s) 954, 966
BstMBI GATC 5 cut(s) 385, 769, 922, 1132, 1392
BstMWI GCNNNNNNNGC 4 cut(s) 446, 667, 791, 996
BstNI CCWGG 2 cut(s) 156, 796
BstNSI RCATGY 3 cut(s) 561, 661, 1003
BstSCI CCNGG 3 cut(s) 154, 350, 794
BstSFI CTRYAG 2 cut(s) 496, 1158
BstSLI GKGCMC 1 cut(s) 618
BstUI CGCG 1 cut(s) 124
BstV1I GCAGC 6 cut(s) 433, 482, 524, 969, 1057, 1366
BstV2I GAAGAC 1 cut(s) 273
BstX2I RGATCY 1 cut(s) 1392
BstYI RGATCY 1 cut(s) 1392
BsuRI GGCC 2 cut(s) 21, 794
BtgI CCRYGG 1 cut(s) 930
BtsCI GGATG 6 cut(s) 436, 465, 1106, 1174, 1274, 1289
BtsI GCAGTG 1 cut(s) 505
BtsIMutI CAGTG 3 cut(s) 37, 505, 1023
Cac8I GCNNGC 7 cut(s) 296, 348, 559, 659, 663, 832, 1001
CaiI CAGNNNCTG 1 cut(s) 1130
CciI TCATGA 2 cut(s) 46, 211
CfoI GCGC 1 cut(s) 124
Cfr13I GGNCC 2 cut(s) 19, 763
CsiI ACCWGGT 1 cut(s) 154
Csp6I GTAC 6 cut(s) 28, 126, 197, 328, 639, 1064
CspCI CAANNNNNGTGG 2 cut(s) 711, 746
CviQI GTAC 6 cut(s) 28, 126, 197, 328, 639, 1064
DdeI CTNAG 7 cut(s) 111, 189, 282, 423, 622, 1144, 1194
DpnI GATC 5 cut(s) 387, 771, 924, 1134, 1394
DpnII GATC 5 cut(s) 385, 769, 922, 1132, 1392
DraIII CACNNNGTG 1 cut(s) 1187
EaeI YGGCCR 1 cut(s) 792
Eam1104I CTCTTC 2 cut(s) 480, 1158
EarI CTCTTC 2 cut(s) 480, 1158
Eco130I CCWWGG 1 cut(s) 930
Eco31I GGTCTC 1 cut(s) 966
Eco32I GATATC 1 cut(s) 692
Eco47I GGWCC 1 cut(s) 763
Eco57I CTGAAG 1 cut(s) 1065
Eco72I CACGTG 1 cut(s) 262
EcoO109I RGGNCCY 2 cut(s) 19, 763
EcoRII CCWGG 2 cut(s) 154, 794
EcoRV GATATC 1 cut(s) 692
EcoT14I CCWWGG 1 cut(s) 930
EcoT22I ATGCAT 2 cut(s) 559, 563
ErhI CCWWGG 1 cut(s) 930
FalI AAGNNNNNCTT 1 cut(s) 38
FaqI GGGAC 5 cut(s) 211, 369, 749, 1070, 1112
Fnu4HI GCNGC 7 cut(s) 447, 496, 513, 958, 1046, 1122, 1355
FokI GGATG 6 cut(s) 443, 472, 1093, 1161, 1261, 1276
Fsp4HI GCNGC 7 cut(s) 447, 496, 513, 958, 1046, 1122, 1355
FspBI CTAG 2 cut(s) 318, 893
GlaI GCGC 1 cut(s) 123
GluI GCNGC 7 cut(s) 447, 496, 513, 958, 1046, 1122, 1355
GsaI CCCAGC 2 cut(s) 646, 1282
HaeIII GGCC 2 cut(s) 21, 794
HapII CCGG 3 cut(s) 351, 695, 987
HhaI GCGC 1 cut(s) 124
Hin6I GCGC 1 cut(s) 122
HinP1I GCGC 1 cut(s) 122
HindIII AAGCTT 1 cut(s) 917
HinfI GANTC 6 cut(s) 71, 91, 161, 479, 737, 947
HpaII CCGG 3 cut(s) 351, 695, 987
HphI GGTGA 2 cut(s) 170, 746
Hpy166II GTNNAC 2 cut(s) 199, 313
Hpy188I TCNGA 9 cut(s) 64, 76, 166, 484, 550, 611, 817, 853, 954
Hpy188III TCNNGA 4 cut(s) 47, 212, 376, 773
Hpy8I GTNNAC 2 cut(s) 199, 313
HpyAV CCTTC 5 cut(s) 8, 32, 647, 851, 1089
HpyCH4III ACNGT 4 cut(s) 32, 249, 365, 745
HpyCH4IV ACGT 2 cut(s) 261, 963
HpyF10VI GCNNNNNNNGC 4 cut(s) 446, 667, 791, 996
HpyF3I CTNAG 7 cut(s) 111, 189, 282, 423, 622, 1144, 1194
HpySE526I ACGT 2 cut(s) 261, 963
HspAI GCGC 1 cut(s) 122
KpnI GGTACC 1 cut(s) 1067
Kzo9I GATC 5 cut(s) 385, 769, 922, 1132, 1392
LmnI GCTCC 3 cut(s) 172, 1081, 1207
Lsp1109I GCAGC 6 cut(s) 433, 482, 524, 969, 1057, 1366
LweI GCATC 2 cut(s) 427, 1283
MabI ACCWGGT 1 cut(s) 154
MaeI CTAG 2 cut(s) 318, 893
MaeII ACGT 2 cut(s) 261, 963
MaeIII GTNAC 6 cut(s) 32, 115, 184, 257, 1189, 1348
MalI GATC 5 cut(s) 387, 771, 924, 1134, 1394
MboI GATC 5 cut(s) 385, 769, 922, 1132, 1392
MboII GAAGA 6 cut(s) 89, 278, 497, 691, 1145, 1258
MfeI CAATTG 1 cut(s) 525
MflI RGATCY 1 cut(s) 1392
MhlI GDGCHC 2 cut(s) 207, 618
MlsI TGGCCA 1 cut(s) 794
MluCI AATT 5 cut(s) 84, 525, 838, 881, 1256
MluNI TGGCCA 1 cut(s) 794
MlyI GAGTC 2 cut(s) 488, 956
MmeI TCCRAC 2 cut(s) 528, 698
Mox20I TGGCCA 1 cut(s) 794
Mph1103I ATGCAT 2 cut(s) 559, 563
MscI TGGCCA 1 cut(s) 794
MseI TTAA 2 cut(s) 759, 836
MslI CAYNNNNRTG 3 cut(s) 210, 363, 458
Msp20I TGGCCA 1 cut(s) 794
MspA1I CMGCKG 1 cut(s) 1048
MspCI CTTAAG 1 cut(s) 758
MspI CCGG 3 cut(s) 351, 695, 987
MspR9I CCNGG 3 cut(s) 156, 352, 796
MunI CAATTG 1 cut(s) 525
Mva1269I GAATGC 1 cut(s) 1282
MvaI CCWGG 2 cut(s) 156, 796
MvnI CGCG 1 cut(s) 124
MwoI GCNNNNNNNGC 4 cut(s) 446, 667, 791, 996
NciI CCSGG 1 cut(s) 352
NcoI CCATGG 1 cut(s) 930
NdeII GATC 5 cut(s) 385, 769, 922, 1132, 1392
NlaIV GGNNCC 4 cut(s) 20, 765, 1065, 1394
NmuCI GTSAC 3 cut(s) 32, 184, 257
NsiI ATGCAT 2 cut(s) 559, 563
NspI RCATGY 3 cut(s) 561, 661, 1003
PaeI GCATGC 3 cut(s) 561, 661, 1003
PagI TCATGA 2 cut(s) 46, 211
PctI GAATGC 1 cut(s) 1282
PfeI GAWTC 4 cut(s) 71, 91, 161, 737
Pfl23II CGTACG 1 cut(s) 327
PflMI CCANNNNNTGG 2 cut(s) 456, 717
PkrI GCNGC 7 cut(s) 448, 497, 514, 959, 1047, 1123, 1356
PleI GAGTC 2 cut(s) 487, 955
PmaCI CACGTG 1 cut(s) 262
PmlI CACGTG 1 cut(s) 262
PpsI GAGTC 2 cut(s) 487, 955
Ppu21I YACGTR 1 cut(s) 262
PpuMI RGGWCCY 1 cut(s) 763
PsiI TTATAA 1 cut(s) 566
Psp1406I AACGTT 1 cut(s) 963
Psp5II RGGWCCY 1 cut(s) 763
Psp6I CCWGG 2 cut(s) 154, 794
PspCI CACGTG 1 cut(s) 262
PspFI CCCAGC 2 cut(s) 642, 1278
PspGI CCWGG 2 cut(s) 154, 794
PspLI CGTACG 1 cut(s) 327
PspN4I GGNNCC 4 cut(s) 20, 765, 1065, 1394
PspPI GGNCC 2 cut(s) 19, 763
PspPPI RGGWCCY 1 cut(s) 763
PstI CTGCAG 2 cut(s) 500, 1162
PstNI CAGNNNCTG 1 cut(s) 1130
PsuI RGATCY 1 cut(s) 1392
RsaI GTAC 6 cut(s) 29, 127, 198, 329, 640, 1065
RsaNI GTAC 6 cut(s) 28, 126, 197, 328, 639, 1064
RseI CAYNNNNRTG 3 cut(s) 210, 363, 458
SaqAI TTAA 2 cut(s) 759, 836
SatI GCNGC 7 cut(s) 447, 496, 513, 958, 1046, 1122, 1355
Sau3AI GATC 5 cut(s) 385, 769, 922, 1132, 1392
Sau96I GGNCC 2 cut(s) 19, 763
SchI GAGTC 2 cut(s) 488, 956
ScrFI CCNGG 3 cut(s) 156, 352, 796
SduI GDGCHC 2 cut(s) 207, 618
SexAI ACCWGGT 1 cut(s) 154
SfaNI GCATC 2 cut(s) 427, 1283
SfcI CTRYAG 2 cut(s) 496, 1158
SinI GGWCC 1 cut(s) 763
SmiMI CAYNNNNRTG 3 cut(s) 210, 363, 458
SmlI CTYRAG 3 cut(s) 758, 786, 904
SmoI CTYRAG 3 cut(s) 758, 786, 904
SpeI ACTAGT 1 cut(s) 317
SphI GCATGC 3 cut(s) 561, 661, 1003
Sse9I AATT 5 cut(s) 84, 525, 838, 881, 1256
SsiI CCGC 2 cut(s) 1048, 1122
SspMI CTAG 2 cut(s) 318, 893
StyD4I CCNGG 3 cut(s) 154, 350, 794
StyI CCWWGG 1 cut(s) 930
TaaI ACNGT 4 cut(s) 32, 249, 365, 745
TaiI ACGT 2 cut(s) 264, 966
TaqI TCGA 1 cut(s) 89
TasI AATT 5 cut(s) 84, 525, 838, 881, 1256
TatI WGTACW 1 cut(s) 196
TauI GCSGC 1 cut(s) 1124
TfiI GAWTC 4 cut(s) 71, 91, 161, 737
Tru1I TTAA 2 cut(s) 759, 836
Tru9I TTAA 2 cut(s) 759, 836
TscAI CASTG 3 cut(s) 37, 505, 1030
TseFI GTSAC 3 cut(s) 32, 184, 257
TseI GCWGC 6 cut(s) 446, 495, 512, 957, 1045, 1354
Tsp45I GTSAC 3 cut(s) 32, 184, 257
TspRI CASTG 3 cut(s) 37, 505, 1030
Van91I CCANNNNNTGG 2 cut(s) 456, 717
Vha464I CTTAAG 1 cut(s) 758
VpaK11BI GGWCC 1 cut(s) 763
XapI RAATTY 2 cut(s) 84, 881
XceI RCATGY 3 cut(s) 561, 661, 1003
XcmI CCANNNNNNNNNTGG 1 cut(s) 1386
XspI CTAG 2 cut(s) 318, 893
Zsp2I ATGCAT 2 cut(s) 559, 563
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.